OpenMM
 All Classes Namespaces Functions Variables Typedefs Enumerations Enumerator Friends
HarmonicAngleForce.h
1 #ifndef OPENMM_HARMONICANGLEFORCE_H_
2 #define OPENMM_HARMONICANGLEFORCE_H_
3 
4 /* -------------------------------------------------------------------------- *
5  * OpenMM *
6  * -------------------------------------------------------------------------- *
7  * This is part of the OpenMM molecular simulation toolkit originating from *
8  * Simbios, the NIH National Center for Physics-Based Simulation of *
9  * Biological Structures at Stanford, funded under the NIH Roadmap for *
10  * Medical Research, grant U54 GM072970. See https://simtk.org. *
11  * *
12  * Portions copyright (c) 2008-2012 Stanford University and the Authors. *
13  * Authors: Peter Eastman *
14  * Contributors: *
15  * *
16  * Permission is hereby granted, free of charge, to any person obtaining a *
17  * copy of this software and associated documentation files (the "Software"), *
18  * to deal in the Software without restriction, including without limitation *
19  * the rights to use, copy, modify, merge, publish, distribute, sublicense, *
20  * and/or sell copies of the Software, and to permit persons to whom the *
21  * Software is furnished to do so, subject to the following conditions: *
22  * *
23  * The above copyright notice and this permission notice shall be included in *
24  * all copies or substantial portions of the Software. *
25  * *
26  * THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR *
27  * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, *
28  * FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL *
29  * THE AUTHORS, CONTRIBUTORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, *
30  * DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR *
31  * OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE *
32  * USE OR OTHER DEALINGS IN THE SOFTWARE. *
33  * -------------------------------------------------------------------------- */
34 
35 #include "Force.h"
36 #include "Vec3.h"
37 #include <map>
38 #include <vector>
39 #include "internal/windowsExport.h"
40 
41 namespace OpenMM {
42 
50 class OPENMM_EXPORT HarmonicAngleForce : public Force {
51 public:
59  int getNumAngles() const {
60  return angles.size();
61  }
72  int addAngle(int particle1, int particle2, int particle3, double angle, double k);
83  void getAngleParameters(int index, int& particle1, int& particle2, int& particle3, double& angle, double& k) const;
94  void setAngleParameters(int index, int particle1, int particle2, int particle3, double angle, double k);
104  void updateParametersInContext(Context& context);
105 protected:
106  ForceImpl* createImpl() const;
107 private:
108  class AngleInfo;
109  std::vector<AngleInfo> angles;
110 };
111 
116 class HarmonicAngleForce::AngleInfo {
117 public:
118  int particle1, particle2, particle3;
119  double angle, k;
120  AngleInfo() {
121  particle1 = particle2 = particle3 = -1;
122  angle = k = 0.0;
123  }
124  AngleInfo(int particle1, int particle2, int particle3, double angle, double k) :
125  particle1(particle1), particle2(particle2), particle3(particle3), angle(angle), k(k) {
126  }
127 };
128 
129 } // namespace OpenMM
130 
131 #endif /*OPENMM_HARMONICANGLEFORCE_H_*/
A Context stores the complete state of a simulation.
Definition: Context.h:67
Force objects apply forces to the particles in a System, or alter their behavior in other ways...
Definition: Force.h:65
This class implements an interaction between groups of three particles that varies harmonically with ...
Definition: HarmonicAngleForce.h:50
A ForceImpl provides the internal implementation of a Force.
Definition: ForceImpl.h:57
int getNumAngles() const
Get the number of harmonic bond angle terms in the potential function.
Definition: HarmonicAngleForce.h:59