PdbAtom Member List
This is the complete list of members for
PdbAtom, including all inherited members.
| canonicalizeAtomName(const String &casualName) | PdbAtom | [protected, static] |
| generatePossibleAtomNames(SimTK::String name) | PdbAtom | [protected, static] |
| getAlternateLocationIndicator() const | PdbAtom | [inline] |
| getCoordinates() const | PdbAtom | [inline] |
| getLocation(char altLoc) const | PdbAtom | |
| getLocation() const | PdbAtom | |
| getName() const | PdbAtom | [inline] |
| getOccupancy() const | PdbAtom | [inline] |
| getPdbAtomLocation() const | PdbAtom | [inline] |
| getTemperatureFactor() const | PdbAtom | [inline] |
| hasLocation(char altLoc) const | PdbAtom | |
| hasLocation() const | PdbAtom | |
| parsePdbLine(const String &line) | PdbAtom | [protected] |
| PdbAtom(const SimTK::String &name, const Element &e) | PdbAtom | [explicit] |
| PdbAtom(const class Compound &compound, const String &atomName, const Transform &transform=Transform()) | PdbAtom | [explicit] |
| PdbAtom(const State &state, const class Compound &compound, const String &atomName, const Transform &transform=Transform()) | PdbAtom | [explicit] |
| PdbResidue class | PdbAtom | [friend] |
| setLocation(const PdbAtomLocation &loc) | PdbAtom | [inline] |
| write(std::ostream &os, int &nextAtomSerialNumber, const char residueName[4], PdbResidueId residueId, char chainId, const Transform &transform) const | PdbAtom | |
