appendResidue(const PdbResidue &residue) | PdbChain | [inline] |
getAtom(String atomName, PdbResidueId residueId) const | PdbChain | |
getChainId() const | PdbChain | [inline] |
getNumAtoms() const | PdbChain | [inline] |
getNumResidues() const | PdbChain | [inline] |
getResidue(Pdb::ResidueIndex resIx) const | PdbChain | [inline] |
hasAtom(String atomName, PdbResidueId residueId) const | PdbChain | |
hasResidue(PdbResidueId pdbResidueId) const | PdbChain | |
parsePdbLine(const String &line) | PdbChain | [protected] |
PdbChain(char id= ' ') | PdbChain | [inline, explicit] |
PdbChain(const Compound &compound, const Transform &transform=Transform()) | PdbChain | [explicit] |
PdbChain(const State &state, const Compound &compound, const Transform &transform=Transform()) | PdbChain | [explicit] |
PdbModel class | PdbChain | [friend] |
updAtom(String atomName, PdbResidueId residueId) | PdbChain | |
write(std::ostream &os, int &nextAtomSerialNumber, const Transform &transform=Transform()) const | PdbChain |