Diff for "Roadmap/Segmentation"

Differences between revisions 15 and 16

Segmentation

Authors: AE = Ahmet Erdemir, CB = Craig Bennetts, SC = Snehal Chokhandre, RC = Robb Colbrunn, TB = Tara Bonner, OG = Omar Gad, CPL = Connor Lough, AGS = Ariel Schwartz, TO = Tammy Owings, EMK = Ellen Klonowski

Bone Segmentation	FMB (femur)	TBB (tibia)	FBB (fibula)	PTB (patella)
oks001	CB (reference) OG CPL_01 CPL_02	CB (reference) OG CPL_01 CPL_02 SC_01 AGS_01	CB (reference) OG CPL_01 CPL_02	CB (reference)OG CPL_01 CPL_02 RC_01 AGS_01
oks002	CPL_01 CPL_02	CPL_01 CPL_02	CPL_01 CPL_02	RC_01
oks003	SC_01 AGS	SC_01 AGS	SC_01 AGS	RC_01 AGS
oks004	SC_01	SC_01	SC_01	RC_01
oks006	SC_01	SC_01 SC_02	SC_01	RC_01 SC_01
oks007	SC_01	SC_01	SC_01	RC_01
oks008	SC_01	SC_01	SC_01	RC_01
oks008	SC_01	SC_01	SC_01	RC_01
oks009	SC_01	SC_01	SC_01	RC_01 SC_01
oks010
oks011
oks012
oks013
oks014
oks015
oks016
oks017
oks018
oks019
oks020
oks021
oks022

Cartilage Segmentation	FMC (femoral)	TBC-M (medial tibial)	TBC-L (lateral tibial)	PTC (patellar)
oks001	CB (reference) OG	CB (reference) OG	CB (reference) OG	CB (reference) AGS_01 OG RC_01
oks002	TO_01	TO_01	TO_01	TO_01
oks003	SC_01 AGS AGS_03	SC_01 AGS	SC_01 AGS	SC_01 AGS
oks004	TO_01	TO_01	TO_01	TO_01
oks006	TO_01	TO_01 TO_02	TO_01	TO_01
oks007	TO_01	TO_01	TO_01	TO_01
oks008	TO_01 SC_01	TO_01 SC_01 SC_02	TO_01 SC_01	TO_01 SC_01
oks009	TO_01	TO_01	TO_01 TO_02	TO_01
oks010
oks011
oks012
oks013
oks014
oks015
oks016
oks017
oks018
oks019
oks020
oks021
oks022

Menisci Segmentation	MNS-M (medial)	MNS-L (lateral)
oks001	CB (reference) OG TB_01	CB (reference) OG
oks002	TB_01	AGS_01
oks003	TB_01 AGS AGS_02 AGS_01	SC_01 AGS AGS_02
oks004	TB_01	SC_01 TO_01
oks006	TB_01 TB_02	TO_01 TO_02
oks007	TB_01 TB_02	TO_01 TO_02
oks008	TB_01 TB_02	TO_01 TO_02
oks009	TB_01 TB_02	TO_01 TO_02
oks010
oks011
oks012
oks013
oks014
oks015
oks016
oks017
oks018
oks019
oks020
oks021
oks022

Connective Tissues Segmentation - Ligaments and Tendons

	ACL	MCL	PCL	LCL	PTL (patellar ligament)	QAT (quadriceps tendon)
oks001	CB (reference) OG AGS_01	AE (reference) OG	CB (reference) OG	CB (reference) OG	CB (reference) OG	CB (reference) OG
oks002	SC_01 AGS_01	AGS_01	SC_01 AGS_01	SC_01 AGS_01	SC_01	SC_01
oks003	SC_01 AGS	SC_01 AGS AGS_02 AGS_01	SC_01 AGS	SC_01 AGS	SC_01 AGS	SC_01 AGS
oks004	SC_01	AGS_01 SC_01	SC_01	SC_01 AGS_01	SC_01 AGS_01	SC_01 AGS_01
oks006	SC_01	SC_01 SC_02	SC_01	SC_01	SC_01	SC_01
oks007	SC_01	SC_01 SC_02	SC_01	SC_01	SC_01	SC_01
oks008	SC_02	SC_02	SC_01	SC_01 SC_02	SC_01	SC_01
oks009	SC_01	SC_02 SC_02	SC_01	SC_01	SC_01	SC_01
oks010
oks011
oks012
oks013
oks014
oks015
oks016
oks017
oks018
oks019
oks020
oks021
oks022

Registration Markers Segmentation

	FMR-L	FMR-M	FMR-P	PTR-L	PTR-M	PTR-S	TBR-L	TBR-M	TBR-P
oks001	CB_02 (reference)	CB_01 (reference) CB_02 CB_03	CB_01 (reference) CB_02	CB_01 (reference)	CB_01 (reference)	CB_01 (reference)	CB_01 (reference) CB_02 CB_03	CB_01 (reference) CB_02 CB_03	CB_01 (reference) CB_02 CB_03
oks002	AGS_01	AGS_01	AGS_01	AGS_01	AGS_01
oks003
oks004
oks006

Registration Markers Segmentation

	oks001	oks002	oks003	oks004	oks006	oks007	oks008	oks009
FMR-L	CB_02 (reference)	AGS_01	AGS_01 AGS	AGS_01	AGS_01	AGS_01	AGS_01	AGS_01
FMR-M	CB_01 (reference) CB_02 CB_03	AGS_01	AGS_01 AGS	AGS_01	AGS_01	AGS_01	AGS_01	AGS_01
FMR-P	CB_01 (reference) CB_02	AGS_01	AGS_01 AGS	AGS_01	AGS_01	AGS_01	AGS_01	AGS_01
PTR-L	CB_01 (reference)	AGS_01	AGS_01 AGS		AGS_01	AGS_01	AGS_01	AGS_01
PTR-M	CB_01 (reference)	AGS_01	AGS_01 AGS		AGS_01	AGS_01	AGS_01	AGS_01
PTR-S	CB_01 (reference)	AGS_01	AGS_01 AGS		AGS_01	AGS_01	AGS_01	AGS_01
TBR-L	CB_01 (reference) CB_02 CB_03	AGS_01	AGS_01 AGS	AGS_01	AGS_01	AGS_01	AGS_01	AGS_01
TBR-M	CB_01 (reference) CB_02 CB_03	AGS_01	AGS_01 AGS	AGS_01	AGS_01	AGS_01	AGS_01	AGS_01
TBR-P	CB_01 (reference) CB_02 CB_03	AGS_01	AGS_01 AGS	AGS_01	AGS_01	AGS_01	AGS_01	AGS_01

-  ⇤ ← Revision 15 as of 2020-05-07 15:46:26 → 
  Size: 30968
  Editor: klonowe
  Comment:
+   ← Revision 16 as of 2020-05-07 16:21:56 → ⇥
  Size: 33530
  Editor: klonowe
  Comment:
-Deletions are marked like this.
+Additions are marked like this.
 Line 99:
+Registration Markers Segmentation
|| ||FMR-L  ||FMR-M  ||FMR-P || PTR-L ||PTR-M  ||PTR-S ||TBR-L ||TBR-M ||TBR-P ||
||oks001 ||[[https://simtk.org/svn/openknee/oks/oks001/dat/segmentation/oks001_MRG_FMR-L_02.nii|CB_02 (reference)]] ||[[https://simtk.org/svn/openknee/oks/oks001/dat/segmentation/oks001_MRG_FMR-M_01.nii|CB_01 (reference)]] [[https://simtk.org/svn/openknee/oks/oks001/dat/segmentation/oks001_MRG_FMR-M_02.nii|CB_02]] [[https://simtk.org/svn/openknee/oks/oks001/dat/segmentation/oks001_MRG_FMR-M_03.nii|CB_03]] ||[[https://simtk.org/svn/openknee/oks/oks001/dat/segmentation/oks001_MRG_FMR-P_01.nii|CB_01 (reference)]] [[https://simtk.org/svn/openknee/oks/oks001/dat/segmentation/oks001_MRG_FMR-P_02.nii|CB_02]] ||[[https://simtk.org/svn/openknee/oks/oks001/dat/segmentation/oks001_MRG_PTR-L_01.nii|CB_01 (reference)]] ||[[https://simtk.org/svn/openknee/oks/oks001/dat/segmentation/oks001_MRG_PTR-M_01.nii|CB_01 (reference)]] ||[[https://simtk.org/svn/openknee/oks/oks001/dat/segmentation/oks001_MRG_PTR-S_01.nii|CB_01 (reference)]] ||[[https://simtk.org/svn/openknee/oks/oks001/dat/segmentation/oks001_MRG_TBR-L_01.nii|CB_01 (reference)]] [[https://simtk.org/svn/openknee/oks/oks001/dat/segmentation/oks001_MRG_TBR-L_02.nii|CB_02]] [[https://simtk.org/svn/openknee/oks/oks001/dat/segmentation/oks001_MRG_TBR-L_03.nii|CB_03]] ||[[https://simtk.org/svn/openknee/oks/oks001/dat/segmentation/oks001_MRG_TBR-M_01.nii|CB_01 (reference)]] [[https://simtk.org/svn/openknee/oks/oks001/dat/segmentation/oks001_MRG_TBR-M_02.nii|CB_02]] [[https://simtk.org/svn/openknee/oks/oks001/dat/segmentation/oks001_MRG_TBR-M_03.nii|CB_03]] ||[[https://simtk.org/svn/openknee/oks/oks001/dat/segmentation/oks001_MRG_TBR-P_01.nii|CB_01 (reference)]] [[https://simtk.org/svn/openknee/oks/oks001/dat/segmentation/oks001_MRG_TBR-P_02.nii|CB_02]] [[https://simtk.org/svn/openknee/oks/oks001/dat/segmentation/oks001_MRG_TBR-P_03.nii|CB_03]] ||
||oks002 ||[[https://simtk.org/svn/openknee/oks/oks002/dat/segmentation/oks002_MRG_FMR-L_AGS_01.nii|AGS_01]] ||[[https://simtk.org/svn/openknee/oks/oks002/dat/segmentation/oks002_MRG_FMR-M_AGS_01.nii|AGS_01]] ||[[https://simtk.org/svn/openknee/oks/oks002/dat/segmentation/oks002_MRG_FMR-P_AGS_01.nii|AGS_01]] ||[[https://simtk.org/svn/openknee/oks/oks002/dat/segmentation/oks002_MRG_PTR-L_AGS_01.nii|AGS_01]] ||[[https://simtk.org/svn/openknee/oks/oks002/dat/segmentation/oks002_MRG_PTR-M_AGS_01.nii|AGS_01]] ||
||oks003 || || || || || || || || || ||
||oks004 || || || || || || || || || ||
||oks006 || || || || || || || || || ||