Diff for "Roadmap/Segmentation"

Differences between revisions 19 and 20

Segmentation

Authors: AE = Ahmet Erdemir, CB = Craig Bennetts, SC = Snehal Chokhandre, RC = Robb Colbrunn, TB = Tara Bonner, OG = Omar Gad, CPL = Connor Lough, AGS = Ariel Schwartz, TO = Tammy Owings, EMK = Ellen Klonowski

Bone Segmentation	FMB (femur)	TBB (tibia)	FBB (fibula)	PTB (patella)
oks001	CB (reference) OG CPL_01 CPL_02	CB (reference) OG CPL_01 CPL_02 SC_01 AGS_01	CB (reference) OG CPL_01 CPL_02	CB (reference)OG CPL_01 CPL_02 RC_01 AGS_01
oks002	CPL_01 CPL_02	CPL_01 CPL_02	CPL_01 CPL_02	RC_01
oks003	SC_01 AGS	SC_01 AGS	SC_01 AGS	RC_01 AGS
oks004	SC_01	SC_01	SC_01	RC_01
oks006	SC_01	SC_01 SC_02	SC_01	RC_01 SC_01
oks007	SC_01	SC_01	SC_01	RC_01
oks008	SC_01	SC_01	SC_01	RC_01
oks008	SC_01	SC_01	SC_01	RC_01
oks009	SC_01	SC_01	SC_01	RC_01 SC_01
oks010
oks011
oks012	EMK_01 EMK_02	EMK_01	EMK_01	EMK_01

||oks013 ||AGS_01|| AGS_01|| AGS_01|| AGS_01||

oks014	AGS_01	AGS_01	AGS_01	AGS_01
oks015
oks016
oks017
oks018
oks019	EMK_01	EMK_01	EMK_01	EMK_01
oks020
oks021
oks022

Cartilage Segmentation	FMC (femoral)	TBC-M (medial tibial)	TBC-L (lateral tibial)	PTC (patellar)
oks001	CB (reference) OG	CB (reference) OG	CB (reference) OG	CB (reference) AGS_01 OG RC_01
oks002	TO_01	TO_01	TO_01	TO_01
oks003	SC_01 AGS AGS_03	SC_01 AGS	SC_01 AGS	SC_01 AGS
oks004	TO_01	TO_01	TO_01	TO_01
oks006	TO_01	TO_01 TO_02	TO_01	TO_01
oks007	TO_01	TO_01	TO_01	TO_01
oks008	TO_01 SC_01	TO_01 SC_01 SC_02	TO_01 SC_01	TO_01 SC_01
oks009	TO_01	TO_01	TO_01 TO_02	TO_01
oks010
oks011
oks012	EMK_01	EMK_01	EMK_01	EMK_01
oks013
oks014
oks015
oks016
oks017
oks018
oks019	EMK_01	EMK_01	EMK_01	EMK_01
oks020
oks021
oks022

Menisci Segmentation	MNS-M (medial)	MNS-L (lateral)
oks001	CB (reference) OG TB_01	CB (reference) OG
oks002	TB_01	AGS_01
oks003	TB_01 AGS AGS_02 AGS_01	SC_01 AGS AGS_02
oks004	TB_01	SC_01 TO_01
oks006	TB_01 TB_02	TO_01 TO_02
oks007	TB_01 TB_02	TO_01 TO_02
oks008	TB_01 TB_02	TO_01 TO_02
oks009	TB_01 TB_02	TO_01 TO_02
oks010
oks011
oks012	EMK_01	EMK_01
oks013
oks014
oks015
oks016
oks017
oks018
oks019	EMK_01	EMK_01
oks020
oks021
oks022

Connective Tissues Segmentation - Ligaments and Tendons

	ACL	MCL	PCL	LCL	PTL (patellar ligament)	QAT (quadriceps tendon)
oks001	CB (reference) OG AGS_01	AE (reference) OG	CB (reference) OG	CB (reference) OG	CB (reference) OG	CB (reference) OG
oks002	SC_01 AGS_01	AGS_01	SC_01 AGS_01	SC_01 AGS_01	SC_01	SC_01
oks003	SC_01 AGS	SC_01 AGS AGS_02 AGS_01	SC_01 AGS	SC_01 AGS	SC_01 AGS	SC_01 AGS
oks004	SC_01	AGS_01 SC_01	SC_01	SC_01 AGS_01	SC_01 AGS_01	SC_01 AGS_01
oks006	SC_01	SC_01 SC_02	SC_01	SC_01	SC_01	SC_01
oks007	SC_01	SC_01 SC_02	SC_01	SC_01	SC_01	SC_01
oks008	SC_02	SC_02	SC_01	SC_01 SC_02	SC_01	SC_01
oks009	SC_01	SC_02 SC_02	SC_01	SC_01	SC_01	SC_01
oks010
oks011
oks012	EMK_01	EMK_01	EMK_01	EMK_01	EMK_01	EMK_01
oks013
oks014
oks015
oks016
oks017
oks018
oks019	EMK_01	EMK_01	EMK_01	EMK_01	EMK_01	EMK_01
oks020
oks021
oks022

Registration Markers Segmentation

	FMR-L	FMR-M	FMR-P	PTR-L	PTR-M	PTR-S	TBR-L	TBR-M	TBR-P
oks001	CB_02 (reference)	CB_01 (reference) CB_02 CB_03	CB_01 (reference) CB_02	CB_01 (reference)	CB_01 (reference)	CB_01 (reference)	CB_01 (reference) CB_02 CB_03	CB_01 (reference) CB_02 CB_03	CB_01 (reference) CB_02 CB_03
oks002	AGS_01	AGS_01	AGS_01	AGS_01	AGS_01	AGS_01	AGS_01	AGS_01	AGS_01
oks003	AGS_01 AGS	AGS_01 AGS	AGS_01 AGS	AGS_01 AGS	AGS_01 AGS	AGS_01 AGS	AGS_01 AGS	AGS_01 AGS	AGS_01 AGS
oks004	AGS_01	AGS_01	AGS_01				AGS_01	AGS_01	AGS_01
oks006	AGS_01	AGS_01	AGS_01	AGS_01	AGS_01	AGS_01	AGS_01	AGS_01	AGS_01
oks007	AGS_01	AGS_01	AGS_01	AGS_01	AGS_01	AGS_01	AGS_01	AGS_01	AGS_01
oks008	AGS_01	AGS_01	AGS_01	AGS_01	AGS_01	AGS_01	AGS_01	AGS_01	AGS_01
oks009	AGS_01	AGS_01	AGS_01	AGS_01	AGS_01	AGS_01	AGS_01	AGS_01	AGS_01
oks010
oks011
oks012	EMK_01	EMK_01	EMK_01				EMK_01	EMK_01	EMK_01
oks013
oks014
oks015
oks016
oks017
oks018
oks019
oks020
oks021
oks022

-  ⇤ ← Revision 19 as of 2020-09-08 18:50:13 → 
  Size: 32758
  Editor: arielschwartz
  Comment:
+   ← Revision 20 as of 2020-09-10 15:12:31 → ⇥
  Size: 35777
  Editor: klonowe
  Comment:
-Deletions are marked like this.
+Additions are marked like this.
 Line 16:
-||oks012 || || || || ||
+||oks012 ||[[https://simtk.org/svn/openknee/oks/oks012/Segmentation/oks012_MRC_FMB_EMK_01.nii|EMK_01]][[https://simtk.org/svn/openknee/oks/oks012/Segmentation/oks012_MRC_FMB_EMK_02.nii|EMK_02]] ||[[https://simtk.org/svn/openknee/oks/oks012/Segmentation/oks012_MRC_TBB_EMK_01.nii|EMK_01]] ||[[https://simtk.org/svn/openknee/oks/oks012/Segmentation/oks012_MRC_FBB_EMK_01.nii|EMK_01]] ||[[https://simtk.org/svn/openknee/oks/oks012/Segmentation/oks012_MRC_PTB_EMK_01.nii|EMK_01]] ||
 Line 23:
-||oks019 || || || || ||
+||oks019 ||[[https://simtk.org/svn/openknee/oks/oks012/Segmentation/oks019_MRC_FMB_EMK_01.nii|EMK_01]] ||[[https://simtk.org/svn/openknee/oks/oks012/Segmentation/oks019_MRC_TBB_EMK_01.nii|EMK_01]] ||[[https://simtk.org/svn/openknee/oks/oks012/Segmentation/oks019_MRC_FBB_EMK_01.nii|EMK_01]] ||[[https://simtk.org/svn/openknee/oks/oks012/Segmentation/oks019_MRC_PTB_EMK_01.nii|EMK_01]] ||
 Line 40:
-||oks012 || || || || ||
+||oks012 ||[[https://simtk.org/svn/openknee/oks/oks012/Segmentation/oks012_MRC_FMC_EMK_01.nii|EMK_01]] ||[[https://simtk.org/svn/openknee/oks/oks012/Segmentation/oks012_MRC_TBC-M_EMK_01.nii|EMK_01]] ||[[https://simtk.org/svn/openknee/oks/oks012/Segmentation/oks012_MRC_TBC-L_EMK_01.nii|EMK_01]] ||[[https://simtk.org/svn/openknee/oks/oks012/Segmentation/oks012_MRC_PTC_EMK_01.nii|EMK_01]] ||
 Line 47:
-||oks019 || || || || ||
+||oks019 ||[[https://simtk.org/svn/openknee/oks/oks012/Segmentation/oks019_MRC_FMC_EMK_01.nii|EMK_01]] ||[[https://simtk.org/svn/openknee/oks/oks012/Segmentation/oks019_MRC_TBC-M_EMK_01.nii|EMK_01]] ||[[https://simtk.org/svn/openknee/oks/oks012/Segmentation/oks019_MRC_TBC-L_EMK_01.nii|EMK_01]] ||[[https://simtk.org/svn/openknee/oks/oks012/Segmentation/oks019_MRC_PTC_EMK_01.nii|EMK_01]] ||
 Line 64:
-||oks012 || || ||
+||oks012 ||[[https://simtk.org/svn/openknee/oks/oks012/Segmentation/oks012_MRC_MNS-M_EMK_01.nii|EMK_01]] ||[[https://simtk.org/svn/openknee/oks/oks012/Segmentation/oks012_MRC_MNS-L_EMK_01.nii|EMK_01]] ||
 Line 71:
-||oks019 || || ||
+||oks019 ||[[https://simtk.org/svn/openknee/oks/oks012/Segmentation/oks019_MRC_MNS-M_EMK_01.nii|EMK_01]] ||[[https://simtk.org/svn/openknee/oks/oks012/Segmentation/oks019_MRC_MNS-L_EMK_01.nii|EMK_01]] ||
 Line 88:
-||oks012 || || || || || || ||
+||oks012 ||[[https://simtk.org/svn/openknee/oks/oks012/Segmentation/oks012_MRC_ACL_EMK_01.nii|EMK_01]] ||[[https://simtk.org/svn/openknee/oks/oks012/Segmentation/oks012_MRC_MCL_EMK_01.nii|EMK_01]] ||[[https://simtk.org/svn/openknee/oks/oks012/Segmentation/oks012_MRC_PCL_EMK_01.nii|EMK_01]] ||[[https://simtk.org/svn/openknee/oks/oks012/Segmentation/oks012_MRC_LCL_EMK_01.nii|EMK_01]] ||[[https://simtk.org/svn/openknee/oks/oks012/Segmentation/oks012_MRC_PTL_EMK_01.nii|EMK_01]] ||[[https://simtk.org/svn/openknee/oks/oks012/Segmentation/oks012_MRC_QAT_EMK_01.nii|EMK_01]] ||
 Line 95:
-||oks019 || || || || || || ||
+||oks019 ||[[https://simtk.org/svn/openknee/oks/oks012/Segmentation/oks012_MRC_ACL_EMK_01.nii|EMK_01]] ||[[https://simtk.org/svn/openknee/oks/oks012/Segmentation/oks012_MRC_MCL_EMK_01.nii|EMK_01]] ||[[https://simtk.org/svn/openknee/oks/oks012/Segmentation/oks012_MRC_PCL_EMK_01.nii|EMK_01]] ||[[https://simtk.org/svn/openknee/oks/oks012/Segmentation/oks012_MRC_LCL_EMK_01.nii|EMK_01]] ||[[https://simtk.org/svn/openknee/oks/oks012/Segmentation/oks012_MRC_PTL_EMK_01.nii|EMK_01]] ||[[https://simtk.org/svn/openknee/oks/oks012/Segmentation/oks012_MRC_QAT_EMK_01.nii|EMK_01]] ||