Search found 3 matches

by Osvaldo Yáñez
Sun Oct 25, 2020 12:25 pm
Forum: OpenMM
Topic: OpenMM MM/GBSA calculations
Replies: 6
Views: 404

Re: OpenMM MM/GBSA calculations

Thank you very much Peter Eastman and Lewis Martin, it was just what I needed to do the MMGBSA calculations.

CaFE looks like a good tool and thanks for presenting it to me.

Greetings
by Osvaldo Yáñez
Mon Oct 19, 2020 8:15 pm
Forum: OpenMM
Topic: OpenMM MM/GBSA calculations
Replies: 6
Views: 404

Re: OpenMM MM/GBSA calculations

Thank you for your quick response, Peter.

I have another question, if openMM has any script in python (e.g., MMPBSA.py with AmberTools ) to run the protocol in MMGBSA.

Regards
by Osvaldo Yáñez
Fri Oct 16, 2020 11:23 am
Forum: OpenMM
Topic: OpenMM MM/GBSA calculations
Replies: 6
Views: 404

OpenMM MM/GBSA calculations

Hello OPENMM team, along with greeting you, I wanted to ask you if there is any protocol for MMGBSA calculations that can be used?

Greetings