Search found 16 matches

by Mandar Kulkarni
Mon Jul 18, 2022 8:25 pm
Forum: SimVascular: Cardiovascular Modeling and Simulation Application
Topic: Import echocardiography and MRI DICOM images
Replies: 3
Views: 145

Re: Import echocardiography and MRI DICOM images

Hi Dave,

That helps!

Where can I get information about the tags requires by the SV DICOM reader?

Thanks,
Mandar
by Mandar Kulkarni
Fri Jul 15, 2022 6:44 pm
Forum: SimVascular: Cardiovascular Modeling and Simulation Application
Topic: Import echocardiography and MRI DICOM images
Replies: 3
Views: 145

Import echocardiography and MRI DICOM images

Hello all, Does anyone know how I can import echocardiography images into SimVascular to create a model, mesh, run a simulation etc? I have a very hundreds of of images currently in JPG format. There is also a DICOM image viewer which allows me to view a video of the echo exam (the images are played...
by Mandar Kulkarni
Tue Jul 12, 2022 7:49 pm
Forum: SimVascular: Cardiovascular Modeling and Simulation Application
Topic: Simvascular compatibility with M1 chip in Mac
Replies: 3
Views: 179

Re: Simvascular compatibility with M1 chip in Mac

Hi Mostafa, I was successful in running SimVascular solver with a single processor, but mpirun ran into some errors, possibly due to the M1 chip. You can take a look here: https://simtk.org/plugins/phpBB/viewtopicPhpbb.php?f=188&t=14348&p=0&start=10&view=&sid=9902e06001161f31c8c81fa843b01c2c Best, M...
by Mandar Kulkarni
Thu Jun 16, 2022 11:05 am
Forum: SimVascular: Cardiovascular Modeling and Simulation Application
Topic: Exporting to vtp
Replies: 9
Views: 412

Re: Exporting to vtp

That explains it, thanks!

Mandar
by Mandar Kulkarni
Tue Jun 14, 2022 9:46 am
Forum: SimVascular: Cardiovascular Modeling and Simulation Application
Topic: minimal C++ build and example
Replies: 15
Views: 1323

Re: minimal C++ build and example

Hi Dave,

No worries, I learned some things about OpenMPI that way :)

Thanks for going all the way to test this out on the M1 chip.

For now, I am set with Ubuntu 18 machine doing the jobs for me.

Mandar
by Mandar Kulkarni
Mon Jun 13, 2022 3:55 pm
Forum: SimVascular: Cardiovascular Modeling and Simulation Application
Topic: Exporting to vtp
Replies: 9
Views: 412

Re: Exporting to vtp

The C++ program works as intended and all_results-flow.txt, all_results-pressure.txt values match exactly with what the SV GUI outputs. Also, just to report the success of using svpost, here is how I used svpost to output the vtp, vtu and restart files: svpost -all -start 0 -stop 100 -incr 50 -ph -l...
by Mandar Kulkarni
Mon Jun 13, 2022 1:14 pm
Forum: SimVascular: Cardiovascular Modeling and Simulation Application
Topic: Exporting to vtp
Replies: 9
Views: 412

Re: Exporting to vtp

Hi Dave,

This is exactly what I was looking for.. I will give it a try and get back to you.

Thanks much!!
Mandar
by Mandar Kulkarni
Sat Jun 11, 2022 8:27 pm
Forum: SimVascular: Cardiovascular Modeling and Simulation Application
Topic: Exporting to vtp
Replies: 9
Views: 412

Re: Exporting to vtp

davep wrote:
Fri Oct 01, 2021 10:39 am

svpost does not compute average values at inlets and outlets files though.
Hello,

I was able to use svpost successfully to create vtp, vtu and restart files.

Is there a separate script to calculate averages?

Thanks,
Mandar
by Mandar Kulkarni
Sat Jun 11, 2022 4:33 pm
Forum: SimVascular: Cardiovascular Modeling and Simulation Application
Topic: How to adjust the parameters of the coronary boundary?
Replies: 9
Views: 586

Re: How to adjust the parameters of the coronary boundary?

Hello,

Thanks for all the explanation in these posts.

In the Coronary Normal example results, there is a mention of the makecortfile.py script for tuning the scaling factors for appropriate coronary flows. Is it available on github, possible with an example?

Thanks,
Mandar