Search found 2 matches
- Sun Apr 21, 2024 11:59 am
- Forum: OpenMM
- Topic: PDB File doesnt properly turn into topology with app.PDBFile
- Replies: 2
- Views: 1734
Re: PDB File doesnt properly turn into topology with app.PDBFile
Thank you so much!!!
- Thu Apr 18, 2024 7:36 am
- Forum: OpenMM
- Topic: PDB File doesnt properly turn into topology with app.PDBFile
- Replies: 2
- Views: 1734
PDB File doesnt properly turn into topology with app.PDBFile
Hello, i am new to OpenMM, so if the fix is obvious please don't go too hard on me. I created a PDB file with Avogadro, which works perfectly fine in VMD or PyMOL, but when i try to open it with app.PDBFile(), it somehow only loads two of the 33 Atoms?? I attached a screenshot of the python code whi...