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- Fri Mar 22, 2013 8:22 am
- Forum: EMMA - Markov Model Algorithms
- Topic: Matrix is singular
- Replies: 0
- Views: 358
Matrix is singular
Dear users and developers, I'm trying to run EMMA for a ligand-protein binding event (for a very small organic molecule) for which I have several trajectories of 20ns each. After clustering, assigning snapshots to clusters and estimating the lagtime, if I estimate the transition matrix using -revers...