Search found 10 matches

by Damian Deza
Wed Jun 12, 2019 6:04 am
Forum: SimVascular: Cardiovascular Modeling and Simulation Application
Topic: Running svSolver in Cluster
Replies: 5
Views: 409

Re: Running svSolver in Cluster

David, I was able to get the mpi version with the command "mpicc -v", this is the one currently on the LD_LIBRARY_PATH and i'm getting this output: mpicc for MPICH version 3.2.1 Using built-in specs. COLLECT_GCC=gcc COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-redhat-linux/4.8.5/lto-wrapper Target: x...
by Damian Deza
Tue Jun 11, 2019 7:57 am
Forum: SimVascular: Cardiovascular Modeling and Simulation Application
Topic: Running svSolver in Cluster
Replies: 5
Views: 409

Re: Running svSolver in Cluster

David, I download the Linux version from the download page then proceeded to unpack it from the .deb Never did any builds. The weird thing is that i was able to run the solver in a VM with centOS and installing mpi with the command yum install mpich I'm only having issues with the cluster. I'm execu...
by Damian Deza
Mon Jun 10, 2019 5:30 am
Forum: SimVascular: Cardiovascular Modeling and Simulation Application
Topic: Running svSolver in Cluster
Replies: 5
Views: 409

Running svSolver in Cluster

Hello, in the past few weeks i tried running a simulation directly with svSolver in a CentOS Linux release 7.6.1810 (Core) cluster having SLURM for work queues. Everytime i try to run a job i get this output /home/*****/svsolver/2019-02-07/bin/svsolver: symbol lookup error: /home/******/svsolver/201...
by Damian Deza
Mon Mar 25, 2019 6:47 am
Forum: SimVascular: Cardiovascular Modeling and Simulation Application
Topic: Continuing simulator with diffierent number of processes
Replies: 2
Views: 192

Continuing simulator with diffierent number of processes

Hello, i was wondering if there is a way of simulating for example 10000 steps with 8 processes and the next 4500 with 12 processes, i mean changing the number and being able to continue from where i left it.

Thank you
by Damian Deza
Tue Mar 12, 2019 7:47 am
Forum: SimVascular: Cardiovascular Modeling and Simulation Application
Topic: Question about how the program uses IC
Replies: 2
Views: 230

Re: Question about how the program uses IC

Hello!
Thank you for the reply, that shed some light on the issue. The main issue is what happens when you change the IC file contained in the first tab of a simulation in the middle of a simulation.
by Damian Deza
Thu Mar 07, 2019 12:29 pm
Forum: SimVascular: Cardiovascular Modeling and Simulation Application
Topic: Question about how the program uses IC
Replies: 2
Views: 230

Question about how the program uses IC

Hello, i've been having some issues lately on my pc crashing or the power going out and i'm losing simulation progress due to not saving the proyect. I found that i could convert files nevertheless, and tryed using this as a new Initial condition file. Does this work how i imagine? i mean does it co...
by Damian Deza
Fri Nov 23, 2018 1:58 pm
Forum: SimVascular: Cardiovascular Modeling and Simulation Application
Topic: Creating data files for Deformable wall
Replies: 1
Views: 267

Re: Creating data files for Deformable wall

Fixed it, solution was to include a Initial condition file to the elastic simulation
by Damian Deza
Fri Nov 23, 2018 1:55 pm
Forum: SimVascular: Cardiovascular Modeling and Simulation Application
Topic: Simvascular and GPU
Replies: 1
Views: 197

Simvascular and GPU

Hello, i was wondering if it was possible to use GPU power and CPU power to speed up simulations, i can't seem to find any option to enable GPU.
Thanks.
by Damian Deza
Tue Oct 23, 2018 1:16 pm
Forum: SimVascular: Cardiovascular Modeling and Simulation Application
Topic: Creating data files for Deformable wall
Replies: 1
Views: 267

Creating data files for Deformable wall

Hello! I've been having issues trying to create data files for a tube with a U turn having deformable walls with this parameters: Cap1: Resistance 16000 Cap2: Velocity with steady flow, -50 cm3/s constant Type: Deformable(Constant) Thickness: 0.2 Elastic Modulus: 4000000 Poisson Ratio: 0.5 Shear Con...