The functionality of OpenMM will (eventually) include everything that one would need to run modern molecular simulation.
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Preeti Sahu
- Posts: 11
- Joined: Mon Jun 16, 2014 8:51 am
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by Preeti Sahu » Wed Jul 02, 2014 10:26 am
Hi all,
The simulation code (simulatePdb.py of OpenMM) that worked absolutely fine initially, gives the following error now! I had downloaded OpenCL and its Linux 32 Ubuntu 12.04 with ATI Radeon Graphics Card.
Code: Select all
Setting of real/effective user Id to 0/0 failed
FATAL: Module fglrx not found.
Error! Fail to load fglrx kernel module! Maybe you can switch to root user to load kernel module directly
Setting of real/effective user Id to 0/0 failed
FATAL: Module fglrx not found.
Error! Fail to load fglrx kernel module! Maybe you can switch to root user to load kernel module directly
X Error of failed request: BadRequest (invalid request code or no such operation)
Major opcode of failed request: 136 ()
Minor opcode of failed request: 19
Serial number of failed request: 12
Current serial number in output stream: 12
[/size]
I have no clue what went wrong.
As per Swails suggestion, after trying
, I get the error-
Last edited by
Preeti Sahu on Wed Jul 02, 2014 10:37 am, edited 1 time in total.
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Jason Swails
- Posts: 47
- Joined: Mon Jan 07, 2013 5:11 pm
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by Jason Swails » Wed Jul 02, 2014 10:30 am
It sounds like you don't have the proper kernel modules loaded. You can try to load it (as root) via:
I haven't had an ATI/AMD video card in ages, so I don't have any practical experience getting their drivers installed or working. But my guess is that the GPU driver was updated (maybe?) or otherwise broken. You can always try rebooting to see if that loads the proper modules as well.
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Preeti Sahu
- Posts: 11
- Joined: Mon Jun 16, 2014 8:51 am
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by Preeti Sahu » Wed Jul 02, 2014 11:02 am
Yes Peter. I had installed amd-catalyst-14-4-rev2-linux-x86-x86-64-may6; Which is for 64 bit Linux! I shall uninstall it and install a compatible one.
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Preeti Sahu
- Posts: 11
- Joined: Mon Jun 16, 2014 8:51 am
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by Preeti Sahu » Sat Jul 05, 2014 9:43 am
Well, I did a forced uninstall of the driver and then installed again; and it worked!