CHARMM-GUI Issue
Posted: Fri Aug 28, 2020 11:34 am
Hi all,
I am having when attempting to run outputs from the CHARMM-GUI (generated for openMM). I can get a simulation to run on the GPU if I create my own input files. my nvcc --version is 10.0.130 and the pythom -m simtktestInstallation is normal. However when using the CHARMM-GUI I get the following error.
Traceback (most recent call last):
File "openmm_run.py", line 74, in <module>
simulation = Simulation(psf.topology, system, integrator, platform, prop)
File "/home/dderedge/Desktop/anaconda3/envs/charmmMD/lib/python3.7/site-packages/simtk/openmm/app/simulation.py", line 105, in __init__
self.context = mm.Context(self.system, self.integrator, platform, platformProperties)
File "/home/dderedge/Desktop/anaconda3/envs/charmmMD/lib/python3.7/site-packages/simtk/openmm/openmm.py", line 18608, in __init__
this = _openmm.new_Context(*args)s
Exception: Error launching CUDA compiler: 256
/tmp/openmmTempKernel0x55cc511f2f30_7018.cu(1002): error: calling a constexpr __host__ function("fmin") from a __global__ function("computeBondedForces") is not allowed. The experimental flag '--expt-relaxed-constexpr' can be used to allow this.
/tmp/openmmTempKernel0x55cc511f2f30_7018.cu(1003): error: calling a constexpr __host__ function("fmin") from a __global__ function("computeBondedForces") is not allowed. The experimental flag '--expt-relaxed-constexpr' can be used to allow this.
2 errors detected in the compilation of "/tmp/tmpxft_00001b82_00000000-6_openmmTempKernel0x55cc511f2f30_7018.cpp1.ii".
Any ideas why this maybe? and why I am only having issues when using the CHARMM-GUI inputs?
Thank you for the help
I am having when attempting to run outputs from the CHARMM-GUI (generated for openMM). I can get a simulation to run on the GPU if I create my own input files. my nvcc --version is 10.0.130 and the pythom -m simtktestInstallation is normal. However when using the CHARMM-GUI I get the following error.
Traceback (most recent call last):
File "openmm_run.py", line 74, in <module>
simulation = Simulation(psf.topology, system, integrator, platform, prop)
File "/home/dderedge/Desktop/anaconda3/envs/charmmMD/lib/python3.7/site-packages/simtk/openmm/app/simulation.py", line 105, in __init__
self.context = mm.Context(self.system, self.integrator, platform, platformProperties)
File "/home/dderedge/Desktop/anaconda3/envs/charmmMD/lib/python3.7/site-packages/simtk/openmm/openmm.py", line 18608, in __init__
this = _openmm.new_Context(*args)s
Exception: Error launching CUDA compiler: 256
/tmp/openmmTempKernel0x55cc511f2f30_7018.cu(1002): error: calling a constexpr __host__ function("fmin") from a __global__ function("computeBondedForces") is not allowed. The experimental flag '--expt-relaxed-constexpr' can be used to allow this.
/tmp/openmmTempKernel0x55cc511f2f30_7018.cu(1003): error: calling a constexpr __host__ function("fmin") from a __global__ function("computeBondedForces") is not allowed. The experimental flag '--expt-relaxed-constexpr' can be used to allow this.
2 errors detected in the compilation of "/tmp/tmpxft_00001b82_00000000-6_openmmTempKernel0x55cc511f2f30_7018.cpp1.ii".
Any ideas why this maybe? and why I am only having issues when using the CHARMM-GUI inputs?
Thank you for the help