Dear Sir,
I am Manish Kesherwani, I am using Charmm openmm interface for simulating membrane bilayer system. Is there openmm prmc option support anisotropic pressure tensor for pressure control.
I am using Charmm C37b2 version.
Please suggest me
Thanks & Regards
Manish Kesherwani
Openmm anisotropic pressure tensor for membrane
- manish kesherwani
- Posts: 1
- Joined: Sat Feb 02, 2013 11:11 am
- Lee-Ping Wang
- Posts: 102
- Joined: Sun Jun 19, 2011 5:14 pm
Re: Openmm anisotropic pressure tensor for membrane
Hi Manish,
OpenMM has the anisotropic Monte Carlo barostat. I'm not sure whether the CHARMM / OpenMM interface knows how to create this object, but this documentation may be helpful:
https://simtk.org/api_docs/openmm/api6_ ... ostat.html
Thanks,
- Lee-Ping
OpenMM has the anisotropic Monte Carlo barostat. I'm not sure whether the CHARMM / OpenMM interface knows how to create this object, but this documentation may be helpful:
https://simtk.org/api_docs/openmm/api6_ ... ostat.html
Thanks,
- Lee-Ping
- Peter Eastman
- Posts: 2593
- Joined: Thu Aug 09, 2007 1:25 pm
Re: Openmm anisotropic pressure tensor for membrane
I believe the CHARMM/OpenMM interface includes a plugin with its own barostat. So far as I know, you just specify pressure options the same way you usually do in CHARMM and it uses that. But I don't know the details.
Peter
Peter
- Michael Garrahan
- Posts: 11
- Joined: Fri Aug 21, 2009 4:32 pm
Re: Openmm anisotropic pressure tensor for membrane
CHARMM's OpenMM barostat did not have anisotropic capability in release c37b2. The version under development a year ago worked exactly as Peter said. The CHARMM user forum could give you a better answer about its current status.