Hello,
I compiled the SimVascular Source Code on 03 of May 2017 on Ubuntu 16.04.
To check the installation I started the application from terminal with ./mysim -qt-gui, opened the DemoProject and generated a mesh successfully. The attempt to run the Simulation raised the message:
Please make sure flowsolver exists!
I have no Third Party CFD solvers installed.
Please advise.
Boris
missing flowsolver
-
Hongzhi Lan
- Posts: 125
- Joined: Mon Aug 04, 2014 3:55 pm
Re: missing flowsolver
Hi Boris,
The source code for SimVascular and solver is separate. We plan to release svSolver installer for Linux soon. Before that, you need to build solver by compiling its source code (https://github.com/SimVascular/svSolver). After compiling, put those solvers (svpre,svsolver,svpost) in your [SimVascular_Build_Dir]/Bin. Relaunch your SimVascular.
SimVascular Development Team
The source code for SimVascular and solver is separate. We plan to release svSolver installer for Linux soon. Before that, you need to build solver by compiling its source code (https://github.com/SimVascular/svSolver). After compiling, put those solvers (svpre,svsolver,svpost) in your [SimVascular_Build_Dir]/Bin. Relaunch your SimVascular.
SimVascular Development Team
-
Boris Morose
- Posts: 3
- Joined: Wed May 03, 2017 6:12 am
Re: missing flowsolver
Dear Hongzhi,
Thanks for your help.
Following your instruction,I successfully built svsolver and can proceed to run the Simulation for your DemoProject example now. What is still missing are pre and post solvers when I try to Create DataFiles for Simulation and to Convert Results after Simulation:
Please make sure presolver exists!
Please make sure postsolver exists!
I did find svpost.exe and svpost-gcc-gfortran.exe files in svsolver/BuildWithMake folder, while pre executables are still missing:
Makefile:94: recipe for target
'../../../../BuildWithMake/Bin/svpre-gcc-gfortran.exe' failed
Thanks for your help.
Following your instruction,I successfully built svsolver and can proceed to run the Simulation for your DemoProject example now. What is still missing are pre and post solvers when I try to Create DataFiles for Simulation and to Convert Results after Simulation:
Please make sure presolver exists!
Please make sure postsolver exists!
I did find svpost.exe and svpost-gcc-gfortran.exe files in svsolver/BuildWithMake folder, while pre executables are still missing:
Makefile:94: recipe for target
'../../../../BuildWithMake/Bin/svpre-gcc-gfortran.exe' failed
-
Hongzhi Lan
- Posts: 125
- Joined: Mon Aug 04, 2014 3:55 pm
Re: missing flowsolver
What operating system are you using? Did you use CMake or just make to build these solvers? Please provide details about how you built them?
For svpre and svsolver, you also need Fortran compiler.
SimVascular Development Team
For svpre and svsolver, you also need Fortran compiler.
SimVascular Development Team
-
Boris Morose
- Posts: 3
- Joined: Wed May 03, 2017 6:12 am
Re: missing flowsolver
I use Ubuntu 16.04 LTS.
To compile the project I just run make from the svsolver/BuildWithMake directory.
Thanks, Boris
To compile the project I just run make from the svsolver/BuildWithMake directory.
Thanks, Boris
-
Hongzhi Lan
- Posts: 125
- Joined: Mon Aug 04, 2014 3:55 pm
Re: missing flowsolver
Please try cmake to build.
1. Make sure you installed gfortran, libmpich-dev first.
2. Build vtk as static libraries.
3. run cmake, provide VTK_DIR, configure and generate make file
4. make
SimVascular Development Team
1. Make sure you installed gfortran, libmpich-dev first.
2. Build vtk as static libraries.
3. run cmake, provide VTK_DIR, configure and generate make file
4. make
SimVascular Development Team
-
Boris Morose
- Posts: 1
- Joined: Tue Apr 04, 2017 12:22 pm
Re: missing flowsolver
I just regenerated Makefile with ccmake in svSolver directory and then rebuilt the project. All solvers where found in svSolver/svSolver-built/bin. I also defined full path to each solver in Preferences / SimVascular Simulation.
Thanks for your help.
Boris
Thanks for your help.
Boris