Where is the adapted solution?

Provides a system for patient-specific cardiovascular modeling and simulation.
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Yun Shi
Posts: 25
Joined: Tue Jan 17, 2017 9:09 pm

Where is the adapted solution?

Post by Yun Shi » Fri Oct 20, 2017 12:58 pm

I am using latest version of SimVascular. I can create an adapted mesh and get “*.msh *.vtu *.vtp” files in meshes file folder. However, there is no adapted solution named as “adapted-restart.[step number].1” which can be used as IC file. Where is the adapted solution?
Otherwise, how to prescribe global min/max edge size?

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Nathan Wilson
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Joined: Tue Jun 20, 2006 9:19 am

Re: Where is the adapted solution?

Post by Nathan Wilson » Sun Oct 22, 2017 12:54 pm

Hello,

Is the adaptor crashing? Do you get an error message? Can you post the log of your adaption?

The most likely cause is that something is going wrong in the projection phase for the solution, and that you are getting an adapted mesh but not the resulting solution files (which would be co-located with the adapted mesh and fairly obvious).

Nathan
SimVascular Development Team

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Yun Shi
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Joined: Tue Jan 17, 2017 9:09 pm

Re: Where is the adapted solution?

Post by Yun Shi » Mon Oct 23, 2017 3:38 pm

Thank you for your response, Nathan!
The adaptor did not collapse, and there is no error message. Log and result of mesh are attached.
Attachments
Result of adaptive mesh.png
Result of adaptive mesh.png (542.73 KiB) Viewed 1332 times
MESH LOG4.png
MESH LOG4.png (39.58 KiB) Viewed 1332 times
MESH LOG3.png
MESH LOG3.png (96.2 KiB) Viewed 1332 times
MESH LOG2.png
MESH LOG2.png (72.47 KiB) Viewed 1332 times
MESH LOG1.png
MESH LOG1.png (84.24 KiB) Viewed 1332 times

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Yun Shi
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Joined: Tue Jan 17, 2017 9:09 pm

Re: Where is the adapted solution?

Post by Yun Shi » Mon Oct 23, 2017 3:49 pm

Then I changed global min edge size from 0.5 to 0.2. It yielded the adaptive mesh but no adapted solution either.
Attachments
Reult of mesh.png
Reult of mesh.png (526.76 KiB) Viewed 1331 times
MESH LOG4.png
MESH LOG4.png (57.7 KiB) Viewed 1331 times
MESH LOG3.png
MESH LOG3.png (94.6 KiB) Viewed 1331 times
MESH LOG2.png
MESH LOG2.png (73.2 KiB) Viewed 1331 times
MESH LOG1.png
MESH LOG1.png (85.18 KiB) Viewed 1331 times

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Adam Updegrove
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Re: Where is the adapted solution?

Post by Adam Updegrove » Wed Oct 25, 2017 8:33 am

Hi Yun Shi,

I just tested with a simple mesh/solution, and I also don't receive an adapted solution. This is a bug, thank you for bringing to our attention. We will have it fixed for the next release. For now, you can use the adapted mesh to rerun your simulation from the beginning.

Thanks!

SimVascular Development Team

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Yun Shi
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Joined: Tue Jan 17, 2017 9:09 pm

Re: Where is the adapted solution?

Post by Yun Shi » Wed Oct 25, 2017 2:09 pm

I see. Thank you, Adam!

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