Regarding calculation of geometric indices

Provides a system for patient-specific cardiovascular modeling and simulation.
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MUDRIKA SINGHAL
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Joined: Thu Jul 02, 2020 12:12 pm

Regarding calculation of geometric indices

Post by MUDRIKA SINGHAL » Wed Apr 26, 2023 3:38 am

Hello!

Can anyone please tell whether SimVascular facilitates the calculation of geometrical parameters such as curvature, torsion and tortuosity from the 3D constructed model?

Thanks!

Regards,
Mudrika

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David Parker
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Joined: Tue Aug 23, 2005 2:43 pm

Re: Regarding calculation of geometric indices

Post by David Parker » Wed Apr 26, 2023 11:03 am

Hi Mudrika,

SV does not explicitly compute the geometric quantities you mentioned. However, the centerline geometry computed in the SV Modeling Tool and ROM Tool has data (e.g., MaximumInscribedSphereRadius, CenterlineSectionNormal) that can be used to compute these quantities. You could also just use the centerline coordinates directly, like fitting a spline to a section of the centerlines.

The easiest thing to do would be to write a Python script to read a centerlines VTP file and extract the data for the computations. See https://github.com/ktbolt/cardiovascula ... results.py for example about how to read this data.

Cheers,
Dave

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MUDRIKA SINGHAL
Posts: 12
Joined: Thu Jul 02, 2020 12:12 pm

Re: Regarding calculation of geometric indices

Post by MUDRIKA SINGHAL » Thu Apr 27, 2023 2:33 am

Thanks David, I will check this out!

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