Issues with flow calculation and with running two simulations at cluster at the same time
Posted: Mon Aug 10, 2020 2:10 pm
Hello everyone,
I am having some problems with my SimVascular simulation. At the inlet I am imposing patient specific boundary conditions using a customized BCT file. In my model only one inlet is present and here I am imposing customized velocities through the BCT file. This one seems to be read in the correct way since the velocity profile showed in the results is correct. The problem is in the computation of the flow. The flow profile and values are different from what I expect - I calculate the flow profile and values using a software and the same velocities written in the bct file. I have tried to reduce the time step, but the results are always the same, does anyone have any idea of what could be the problem?
I have also an issue with running the simulation job at cluster. One of my colleagues and I are using the same node of the cluster, which has 40 processors. Each one of us uses 13 processors but when we run two different simulation jobs at the same time the %CPU used lowers from 100% to 50%, is there a way to solve this problem?
Thank you for your help,
Valentina
I am having some problems with my SimVascular simulation. At the inlet I am imposing patient specific boundary conditions using a customized BCT file. In my model only one inlet is present and here I am imposing customized velocities through the BCT file. This one seems to be read in the correct way since the velocity profile showed in the results is correct. The problem is in the computation of the flow. The flow profile and values are different from what I expect - I calculate the flow profile and values using a software and the same velocities written in the bct file. I have tried to reduce the time step, but the results are always the same, does anyone have any idea of what could be the problem?
I have also an issue with running the simulation job at cluster. One of my colleagues and I are using the same node of the cluster, which has 40 processors. Each one of us uses 13 processors but when we run two different simulation jobs at the same time the %CPU used lowers from 100% to 50%, is there a way to solve this problem?
Thank you for your help,
Valentina