Page 1 of 1

Welcome to Help

Posted: Wed Nov 26, 2008 8:57 am
by SimTK.org Admin
Welcome to Help

can't run tutorial. problem with install?

Posted: Tue Nov 06, 2012 4:09 pm
by skinnerj
Hi,

I'm getting an error when I try to run the first part of the tutorial: ConvertDataToHDF.py -s native.pdb -i XTC

Here's the error:
Traceback (most recent call last):
File "/home/skinnerj/.local/bin/ConvertDataToHDF.py", line 26, in <module>
from msmbuilder import FahProject
File "/home/skinnerj/.local/lib/python2.7/site-packages/msmbuilder/__init__.py", line 56, in <module>
from Serializer import Serializer
File "/home/skinnerj/.local/lib/python2.7/site-packages/msmbuilder/Serializer.py", line 25, in <module>
import tables
ImportError: No module named tables

This happens both on the my local machine and a remote machine. On the remote machine I installed msmbuilder using python setup.py install --prefix=~/.local
On the local machine I installed using sudo python setup.py install

Any help will be greatly appreciated.

Thanks,
Jack

Re: Welcome to Help

Posted: Tue Nov 13, 2012 12:10 am
by jintan239
Hi,
you should install Pytables,a module of python.

Re: Welcome to Help

Posted: Fri Aug 18, 2017 1:20 pm
by spadanco
It was amazing