Umberger 2010 Metabolic Probe
Posted: Thu Mar 19, 2020 8:56 am
Hi all,
I am trying to append a Umberger2010MetabolicsMuscleProbe to a gait2392 model. I have already gone through the workflow here with success:https://simtk-confluence.stanford.edu:8 ... bolic+Cost
When I run that code, I get overall metabolic rate as well as each individual muscle.
However, when I try to add the probe to the 2392 model, all I get is the basal metabolic rate. I have unchecked the box where it asks if I want only the overall metabolics. I did examine the code of both probes. I noticed that with the gait10dof18musc model, the probe contains a list of muscles such as the following, where the probe for the 2392 model does not.
Is there a list of these values somewhere fore Gait2392? I looked at the Github and cannot seem to find it. Can I add this into the probe within the code of OpenSim itself so I do not have to do it every time? Thanks for your help.
Dan
I am trying to append a Umberger2010MetabolicsMuscleProbe to a gait2392 model. I have already gone through the workflow here with success:https://simtk-confluence.stanford.edu:8 ... bolic+Cost
When I run that code, I get overall metabolic rate as well as each individual muscle.
However, when I try to add the probe to the 2392 model, all I get is the basal metabolic rate. I have unchecked the box where it asks if I want only the overall metabolics. I did examine the code of both probes. I noticed that with the gait10dof18musc model, the probe contains a list of muscles such as the following, where the probe for the 2392 model does not.
Code: Select all
<objects>
<Umberger2010MuscleMetabolicsProbe_MetabolicMuscleParameter name="hamstrings_r">
<!--Ratio of slow twitch fibers in the muscle (must be between 0 and 1).-->
<ratio_slow_twitch_fibers>0.49</ratio_slow_twitch_fibers>
<!--An optional flag that allows the user to explicitly specify a muscle mass. If set to true, the <provided_muscle_mass> property must be specified.-->
<use_provided_muscle_mass>false</use_provided_muscle_mass>
</Umberger2010MuscleMetabolicsProbe_MetabolicMuscleParameter>
<Umberger2010MuscleMetabolicsProbe_MetabolicMuscleParameter name="bifemsh_r">
<!--Ratio of slow twitch fibers in the muscle (must be between 0 and 1).-->
<ratio_slow_twitch_fibers>0.53</ratio_slow_twitch_fibers>
<!--An optional flag that allows the user to explicitly specify a muscle mass. If set to true, the <provided_muscle_mass> property must be specified.-->
<use_provided_muscle_mass>false</use_provided_muscle_mass>
</Umberger2010MuscleMetabolicsProbe_MetabolicMuscleParameter>Dan