Opensim 3.0 from source - segfaults on some tests
Posted: Thu Jan 10, 2013 3:23 pm
Dear all,
first of all thank you for making your software project freely available. I really appreciate this! I am new to opensim an so far I “use” the Windows GUI in a virtual machine on Linux. I have tried to utilize the precompiled Linux binaries, but experienced some undefined reference errors trying to compile the Tug_of_War code (ExampleMain). So I compiled SimTK and OpenSim from source. The SimTK installation worked fine, but after compiling Opensim some tests segfaulted
--------------------------------------------------------------------------------------------
89% tests passed, 5 tests failed out of 45
Total Test time (real) = 288.43 sec
The following tests FAILED:
12 - testMomentArms (SEGFAULT)
13 - testAssemblySolver (SEGFAULT)
25 - testModelCopy (SEGFAULT)
35 - testWrapping (SEGFAULT)
36 - testAnalyzeTutorialOne (SEGFAULT)
Errors while running CTest
------------------------------------------------------------------------------------------
Manually executing the failing executables resulted in
------------------------------------------------------------------------------------------
Exception:
Object: ERR- Could not open file arm26.osim. It may not exist or you don't
have permission to read it.
file= /home/sebastian/Desk/opensim/OpenSim-3.0.0-source/OpenSim/Common/Object.cpp
line= 114
--------------------------------------------------------------------------------------------
As far as I can see the files that could not be opened are available and I have permission to read them. I have some troubles, when I look into the cpp source to find what might be the problem, because I just started to learn cpp.
Could You please give me a hint where to look? How can I check whether this is a problem of the tests or of the installation?
Thank’s for your help and Best Regards
Sebastian
debian 6.0.6 stable
gcc version 4.4.5 (Debian 4.4.5-8)
liblapack-dev (Debian)
first of all thank you for making your software project freely available. I really appreciate this! I am new to opensim an so far I “use” the Windows GUI in a virtual machine on Linux. I have tried to utilize the precompiled Linux binaries, but experienced some undefined reference errors trying to compile the Tug_of_War code (ExampleMain). So I compiled SimTK and OpenSim from source. The SimTK installation worked fine, but after compiling Opensim some tests segfaulted
--------------------------------------------------------------------------------------------
89% tests passed, 5 tests failed out of 45
Total Test time (real) = 288.43 sec
The following tests FAILED:
12 - testMomentArms (SEGFAULT)
13 - testAssemblySolver (SEGFAULT)
25 - testModelCopy (SEGFAULT)
35 - testWrapping (SEGFAULT)
36 - testAnalyzeTutorialOne (SEGFAULT)
Errors while running CTest
------------------------------------------------------------------------------------------
Manually executing the failing executables resulted in
------------------------------------------------------------------------------------------
Exception:
Object: ERR- Could not open file arm26.osim. It may not exist or you don't
have permission to read it.
file= /home/sebastian/Desk/opensim/OpenSim-3.0.0-source/OpenSim/Common/Object.cpp
line= 114
--------------------------------------------------------------------------------------------
As far as I can see the files that could not be opened are available and I have permission to read them. I have some troubles, when I look into the cpp source to find what might be the problem, because I just started to learn cpp.
Could You please give me a hint where to look? How can I check whether this is a problem of the tests or of the installation?
Thank’s for your help and Best Regards
Sebastian
debian 6.0.6 stable
gcc version 4.4.5 (Debian 4.4.5-8)
liblapack-dev (Debian)