Generate random loop conformations

Provide an easy to use API to model, manipulate, and analyze proteins and their loops. Integrate existing models and algorithms into a single modeling framework - for example, rotamers, PDB files, inverse kinematic algorithms, etc.
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Santhosh Vammi
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Joined: Wed Apr 25, 2012 1:33 pm

Generate random loop conformations

Post by Santhosh Vammi » Thu Nov 21, 2013 12:32 pm

Hello

I was able to install LookTk in my system and am looking to generate random conformations of a part of the protein.

Is there a script or code that could be used to randomly generate, say 100, different possible conformations of a part of protein ?

Thanks
Vijay

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