Extraneous faces when reading in model with extensions from VMTK

Provides a system for patient-specific cardiovascular modeling and simulation.
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Elizabeth Thompson
Posts: 12
Joined: Thu Jun 30, 2022 2:58 pm

Extraneous faces when reading in model with extensions from VMTK

Post by Elizabeth Thompson » Wed Mar 13, 2024 12:09 pm

Hi,

I have a model that I've created in SimVascular. I trim the ends in SimVascular, export it as a solid model to a .vtp file, and then add flow extensions in VMTK. When I read the new model with extensions back in to SimVascular and have SimVascular automatically identify the faces, there are a number of extraneous faces which I cannot seem to visualize as they must be too small. I get only one of these extraneous faces when I increase the separation angle to 90deg, but I cannot figure out where it is, even when I hide all of the other faces that should be there. Any advice on 1) how to see where a face is based on its name in the face list, and 2) how to get rid of extraneous faces?

Thank you!

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David Parker
Posts: 1716
Joined: Tue Aug 23, 2005 2:43 pm

Re: Extraneous faces when reading in model with extensions from VMTK

Post by David Parker » Wed Mar 13, 2024 1:39 pm

Hello,

Trimming the model in SV is probably creating small triangles and then adding flow extensions in VMTK might be creating holes or non-manifold geometry that adds extraneous faces.

It would probably be better to just delete the faces
- Create a copy of the model
- Select a face from the Face List
- Select the Delete button
- Save the model

This should create a well-defined boundary that VMTK can use to add extensions.

Cheers,
Dave

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