VTK Installation

[seyed Jamal Eldin mahdavifar]

Dear Dave
Thanks for your interest. As you said before, I installed the VTK according to the instructions on the site below.
(https://github.com/SimVascular/svFSIplus)
But when I run the command "make install" it gives me the following error
{
CMake Error at Wrapping/Tools/cmake_install.cmake:46 (file):
file INSTALL cannot set permissions on
"/user/shared/vtk/install/include/vtk-9.3/vtkParse.h": Operation not permitted.
Call Stack (most recent call first):
cmake_install.cmake:47 (include)
}
Can you help me solve this problem?
Best
Jamal

[seyed Jamal Eldin mahdavifar]

Dear Dave
Following the previous post, when I ran the "sudo make install" command instead of the " make install" command for
Building VTK, the previous problem was solved, But when I run the "install" command in the fsiplus-build directory
according to the instructions, it gives the following error
{
CMake Error at Source/svFSI/CMakeLists.txt:139 (find_package):
By not providing "FindVTK.cmake" in CMAKE_MODULE_PATH this project has
asked CMake to find a package configuration file provided by "VTK", but
CMake did not find one.
Could not find a package configuration file provided by "VTK" with any of
the following names:
VTKConfig.cmake
vtk-config.cmake
Add the installation prefix of "VTK" to CMAKE_PREFIX_PATH or set "VTK_DIR"
to a directory containing one of the above files. If "VTK" provides a
separate development package or SDK, be sure it has been installed.
}
I appreciate your guiding me regarding this.
Best
Jamal

[David Parker]

Hi Jamal,

When you execute ccmake you need to set the location of the VTK build in the SV_LOCAL_VTK_PATH parameter.

Screenshot 2024-10-04 at 12.12.56 PM.png (217.71 KiB) Viewed 371 times

Cheers,
Dave

[seyed Jamal Eldin mahdavifar]

Dear Dave
Thanks for your reply. The previous problem was solved with your help.
But when I run the command "make" according to the instructions, the following
message will appear and svfsiplus binary executable isnt created in path "fsiplus-build/svFSIplus-build/bin"

Screenshot from 2024-10-15 18-34-47.png (179.62 KiB) Viewed 309 times

I would be grateful if you could help me
Regards
Jamal

[David Parker]

Hi Jamal,

It seems that you don't have OpenMPI installed. You can install it using apt on Ubuntu and brew on MacOS.

Cheers,
Dave

[seyed Jamal Eldin mahdavifar]

Hi Dave
Thanks for your interest. According your advice I install OpenMPI with command
"sudo apt-get install openmpi-bin openmpi-common libopenmpi-dev libgtk2.0-dev".
But when I run command "make", the following message appears

Screenshot from 2024-10-16 10-24-43.png (250.56 KiB) Viewed 273 times

I appreciate your guiding me regarding this.
Best
Jamal

[David Parker]

Hi Jamal,

The Filesystem library was added to C++ 17 so it seems that you don't have C++ 17 installed or you have not set CMake to use it (see https://github.com/SimVascular/svFSIplus). Which Ubuntu are you using?

You can install it using apt-get install g++-17 and then set the CMake compiler flags (e.g. CMAKE_CXX_COMPILER) to use this version.

Cheers,
Dave

[seyed Jamal Eldin mahdavifar]

Hi Dave
Thanks for your response. My Ubuntu is Ubuntu 18.04.
Please let me know if you could help me.
Best
Jamal

[David Parker]

Hi Jamal,

Ubuntu 18 is not longer supported, you should upgrade to Ubuntu 20 or even better Ubuntu 22.

There are svFSIplus installers for Ubuntu 20 and 22 on SimTK.

Cheers,
Dave