Errror in Segmentation @ Multi vessel path using Machine learning

Provides a system for patient-specific cardiovascular modeling and simulation.
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subash Pal
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Errror in Segmentation @ Multi vessel path using Machine learning

Post by subash Pal » Wed May 13, 2020 6:32 am

Hello,
I am using Open source software sim vascular 2020.04.06,
when i am try to do segmentation for multi vessel using Machine it's continuously showing error and after some time it closes the the software automatically.
i request to someone kindly suggest me how to resolve mentioned problem.
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Gabriel Maher
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Re: Errror in Segmentation @ Multi vessel path using Machine learning

Post by Gabriel Maher » Wed May 13, 2020 11:06 am

Hi Subash,

Thanks for reaching out. To help could you answer a few questions?

What image format are you using (e.g. MHA, DICOM, VTI etc.)?

How are you loading the image into SimVascular?

If possible could you also try launching SimVascular from a command window and then reporting any error messages it shows?

Best,

Gabriel

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subash Pal
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Re: Errror in Segmentation @ Multi vessel path using Machine learning

Post by subash Pal » Wed May 13, 2020 11:18 am

Hello Maher,
Thanks a lot for your valuable suggestions and for showing interest to resolve my problem.
I am using a DICOM image. and for loading image into sim vascular first, I create a project and then through open file import image.

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Gabriel Maher
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Re: Errror in Segmentation @ Multi vessel path using Machine learning

Post by Gabriel Maher » Wed May 13, 2020 11:26 am

Thanks for the quick response,

Importing an image through Open File is currently not supported.

Could you try importing the image by right-clicking on "Images" in the data manager on the left side of the screen and then choosing "Add/Replace images" to import your image?

You can also see how it is done here: http://simvascular.github.io/docsQuickG ... management

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subash Pal
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Re: Errror in Segmentation @ Multi vessel path using Machine learning

Post by subash Pal » Wed May 13, 2020 9:59 pm

Thank you very much for your response,
I tried your ways but still find the error.
kindly look in to the attached file and suggest some points to resolve it.

Thanks in anticipation.
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Gabriel Maher
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Re: Errror in Segmentation @ Multi vessel path using Machine learning

Post by Gabriel Maher » Mon May 18, 2020 2:37 pm

Hi Sabush,

Thanks this was helpful.

What version of windows are you using and how much RAM do you have?

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