Bayesian hidden Markov model (BHMM) toolkit
https://simtk.org/home/bhmm

AUTHORS

John D. Chodera <jchodera@berkeley.edu>
Nina Singhal Hinrichs
Aaron Ewall-Wice

MANIFEST

doc/ - documentation
bhmm/ - the BHMM implementation
validation/ - validation scripts to verify the correctness of the BHMM implementation
examples/ - example applications to experimental data
attic/ - unused or deprecated files