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draw is used to draw secondary structures as Postscript images.
These Postscript images can be drawn in a variety of ways,
including annotated or circularized. Every individual structure
is sized to fit on a single Postscript page.
USAGE: draw
<ct file> <ps file> [options]
| <ct file> |
The name of file containing CT data for the structure to be
drawn.
|
| <ps file> |
The name of a Postscript image file to which output will be
written.
|
| -c, -C, --circle |
Specify that the structure should be drawn with its
backbone around a circle.
Default is to show a collapsed structure.
|
| -h, -H, --help |
Display the usage details message. |
| -p, -P, --probability |
Specify the name of the file from which base pairing
probability data will be read for annotation. This file must
be a partition function save file generated by partition.
Default is no probability annotation file used.
|
| -s, -S, --SHAPE |
Specify the name of the file from which SHAPE data will be
read for annotation.
Default is no SHAPE annotation file used.
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Reuter, J.S. and Mathews, D.H.
"RNAstructure: software for RNA secondary structure prediction
and analysis."
BMC Bioinformatics, 11:129. (2010).
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