bpp_align - Revision 5: /RNAstructure/src

• ..
• DotPlotHandler.cpp
• DotPlotHandler.h
• ErrorChecker.h
• MaxExpect.cpp
• MaxExpect.h
• MaxExpectStack.cpp
• MaxExpectStack.h
• OligoScreenCalc.cpp
• OligoScreenCalc.h
• ParseCommandLine.cpp
• ParseCommandLine.h
• PostscriptWriting/
• TProgressDialog.cpp
• TProgressDialog.h
• algorithm.cpp
• algorithm.h
• align_services.cpp
• align_services.h
• alignment_hmm_model.cpp
• alignment_hmm_model.h
• alltrace.cpp
• alltrace.h
• alltrace_intermolecular.cpp
• alltrace_intermolecular.h
• aln_env_services.cpp
• aln_env_services.h
• aln_env_utils.cpp
• aln_env_utils.h
• arrayclass.cpp
• arrayclass.h
• bimol.cpp
• bimol.h
• configfile.cpp
• configfile.h
• defines.h
• dotarray.cpp
• dotarray.h
• draw.cpp
• draw.h
• dynalign.cpp
• dynalign.h
• dynalignarray.cpp
• dynalignarray.h
• dynalignheap.cpp
• dynalignheap.h
• dynalignstackclass.cpp
• dynalignstackclass.h
• errmsg.cpp
• errmsg.h
• extended_double.cpp
• extended_double.h
• findpseudo.cpp
• findpseudo.h
• forceclass.cpp
• forceclass.h
• hmm_arrays.cpp
• hmm_arrays.h
• hmm_probs.cpp
• hmm_probs.h
• intermolecular.cpp
• intermolecular.h
• legacy.cpp
• legacy.h
• misc_decoding_services.cpp
• misc_decoding_services.h
• mm.cpp
• observable.cpp
• observable.h
• observer.cpp
• observer.h
• observingtextprogressbar.cpp
• observingtextprogressbar.h
• outputconstraints.cpp
• outputconstraints.h
• pclass.cpp
• pclass.h
• pfunction.cpp
• pfunction.h
• platform.h
• probknot.cpp
• probknot.h
• process_output.cpp
• process_output.h
• random.cpp
• random.h
• rank.cpp
• rank.h
• rankconsumer.cpp
• rankconsumer.h
• rankmanager.cpp
• rankmanager.h
• rankproducer.cpp
• rankproducer.h
• rna_library.cpp
• rna_library.h
• score.cpp
• score.h
• siRNAfilter.cpp
• siRNAfilter.h
• stackclass.cpp
• stackclass.h
• stackstruct.cpp
• stackstruct.h
• stochastic.cpp
• stochastic.h
• structure.cpp
• structure.h
• substructure.cpp
• thermo.cpp
• thermo.h
• varray.cpp
• varray.h
• wendarray.cpp
• wendarray.h
• workslice.h
• workunit.h
• xlog_math.cpp
• xlog_math.h