C.diphtheriae.1 BX248356.1/172244-172444 CUGUACAAAUCGCACCAAGGUG..UUAGUGUUG....................GGUGU....GUUGAAGU......GAUC..GGGAA.UGCC.A.G.UGC...............................AAUUCUGGCAGCGGACC.CC.GCCACUGUAA..CC.GCAAAUUA....UGCCCAUUUCUA.................................GCCACUGCAG....U..........................................................CCU.GCGGGAAGGG...UAG..A.AA..GACACACUUU.........................................................UUACUGGGCGCGG.UAGCCAGGAGACCGGCUUCAACAUUUUAUACGUAG
C.diphtheriae.2 BX248357.1/28572-28772 UGUGUUACACAUUGAUUAGGU...GCAGCAU......................AGAAC....UGCUGC..........AU..GGGAA.U.CU.G.G.UGA...............................AAAUCCAG.AGCUGA.C.GC.GCAGCGGUGA..AG.GUGCA.......AGUGAGUGCUUCAAUGUA...........................GCCACUGAGAGUAUAAAAA......................................................CUC.UUGGGAAGGU...GAG..G.CA..AUUACUCUCG..........................................................CGUAGAGCACCC.CAGUCCGAAGACCGGCCUAAUCAGAAACAUGUGCU
Mycobacterium_smegma.1 CP000480.1/6690166-6689959 GUACCGGCCAUCGAGUUCCGUG..UGCUGUC......................ACAGG....UGCGGAAC......GAGA..GGGAA.C.CC.G.G.UGA...............................AAAUCCGG.GACUGU.C.CC.GCAGCGGUAU..GC.AGGA........ACGACCGCCGUCAUCA..............................GCACUGGCCCCGCCUAG.......................................................GGG.CUGGGAAGC....GAC..G.GC..CAGUAGGUGU..................................................GCGUCAGCGCACGCGCCUGU.GAGUCCGAAGACCUGCCAGCCGUACCGGAUGCGCC
M.leprae.1 Z94723.1/23034-23246 CACACGGCGCCAGUAUCGAGU...GAUGCUA......................GCUC.....AGCAUCGC......GAGA..GGGAA.C.CC.G.G.UGA...............................GAAUCCGG.GACUGU.C.CC.GCAGCGGUAU..GC.AGG.........AACGACCGCCGUCUGGA............................AGCACUGGUCUUAGAAAAAUCCG..................................................AGA.CUGGGAAGCG...AUG..G.CC..AUUAGAAGCA..................................................CCUAUCCAGUGCGCGCCUGC.GAGUCCGAAGACCUGCCGGCUGUGUCGGGCGCGCC
Mycobacterium_smegma.2 CP000480.1/6704143-6703957 GGCUAUUGUUGUGGCGCUGGU...CGGCCCG......................ACCGGC...CCGAUGAG......UAGGU.AGGAA.G.CC.G.G.UGU...............................GAAUCCGG.CAUGGU.C.CC.GCCACUGUGA..CU.GGG.........GAGCGAACCCCACAUCG............................ACCACGGCU..UGAC............................................................G.GCUGGAAGGU...CGG..G.GU..GAGCACUGAU..................................................................CCAG.AAGUCAGGAUACU.GCUCUCAUUGGCCCUCUUGCU
Mycobacterium_ulcera.1 CP000325.1/140970-141190 AUCGCCCCACGCGGUGUCGGCA..UCGAGCGA.....................GGCAU....CAACGAUGCGUCGUAAGA..GGGAA.U.CC.G.G.UGA...............................GAAUCCGG.AACUGU.C.CC.GCAGCGGUAU..GC.AGGA........ACGACCGCCGUCAUGAACGAAACA.....................AGCACUGGUCCUUCA..........................................................CGA.CUGGGAAGC....GAC..G.GC..CACUAGAAGC..................................................ACCACCGGGUGCGCGCCUGC.GAGUCCGAAGACCUGCCAGUUGUGCCGGGCGCGCC
M.leprae.2 AL583923.1/215513-215333 GUACUAUAUGCGACACUGUGUA..UCUGU........................AAAGG....CGAUGACG......AUGC..AGGAA.G.UC.G.G.UGC...............................AAAGCCGG.CGCGGU.C.CC.GCCACUGUAA..UC.GG..........GGAGCGACCCUCGUAG.............................GCCACGGCCA...............................................................UUG.GCUGGAAGGC...GAG..G.CA..AGCGGUGAU...................................................................CCGA.GAGCCAGGAAACUCGCGUCAUCGCGUCCUGCUAAC
Mycobacterium_ulcera.2 CP000325.1/2461077-2460867 UUGUCGGCAUCAAGCGGCGGA...GGCUUUC......................GCAGC....UUCGUCGU......GAGA..GGGAA.C.CC.G.G.UGG...............................GAAUCCGG.GACUGU.C.CC.GCAGCGGUAU..GC.AGGA........ACGAACACCGUCAUCG..............................GCACUGGCCCCACAGCCUG.....................................................GGA.CUGGGAAGC....GAC..G.GU..UAGUAGGAGC................................................ACCAUCGUCGGUGCGGGCCUGC.GAGUCCGAAGACCUGCCAGUUGCGCCGGGCACGUU
Mycobacterium_gilvum.1 CP000656.1/4145754-4145933 UGUAUGGCUGGUCGACCCGA....CCGGCCC......................CGAUG....AACAGG...........C..AGGAA.G.CC.G.G.UGU...............................GAAUCCGG.CGCGGU.C.CC.GCCACUGUGA..CC.GG..........GGAGCGAACCCCACGUCG...........................ACCACGGCC..GAGA............................................................G.GCUGGAAGGU...CGG..G.GU..GAGCGCUGAU..................................................................CCGG.GAGUCAGGAUACUGCUCUCGUCGGCCCUCUUGCUG
Mycobacterium_avium_.1 AE016958.1/2995864-2996105 AUCGAGCGAAGCAACGUUAGUA..ACGCUU...................................CGU........AAGA..GGGAA.C.CC.G.G.UGA...............................GAAUCCGG.GACUGU.C.CC.GCAACGGUAU..GC.AGGA........ACGACCGCCGUCACCA..............................GCACUGGUC.GCAA...........................................................GA.CUGGGAAGC....GAC..G.GC..CACUAGGAACUGCCCGGCUCCUCGGCGGCCCUUCGGGACCGCAUCGUCGGCCGGGCACGCACCACCCGGUGCGCGCCUGC.GAGUCCGGAGACCUGCCAGCUGUGCCGGGCGCGCC
Mycobacterium_avium_.2 CP000479.1/1283346-1283177 CAAGAAUGUCACCCGUAAGGUG...............................AUGA...........CG......AUGC..AGGAA.G.CC.G.G.UGC...............................GAAUCCGG.CGCGGU.C.CC.GCCACUGUCA..UC.GG..........GGAGCGACCCUCAACG.............................GCCACGGCU..GACA............................................................A.GCUGGAAGGC...GAG..G.CG..AGCGGCGAU...................................................................CCGA.GAGCCAGGACACUCGCGUCAUCGCGUCCUGCGACC
Mycobacterium_bovis_.1 BX248334.1/308192-308010 CCACGCUCUGCAUGCCAAUAU...UCUUCCC......................GUCAGG...CGAUGACG......AUGC..AGGAA.G.CC.G.G.UGA...............................GAAUCCGG.CGCGGU.C.CC.GCCACUGUCA..CC.GG..........GGAGCGACCCUCAUAA.............................GCCACGGCC...ACA............................................................G.GCUGGAAGGC...GAG..G.CA..AGCAACGAU...................................................................CCGG.GAGCCAGGAGACUCGCGUCAUCGCGUCCUGCCACC
Mycobacterium_bovis_.2 BX248337.1/276050-275850 GGCAUCGAGCGGGGCAACGAUG..CUUCGC...................................GAG...........A..GGGAA.C.CU.G.G.UGA...............................GAAUCCGG.GACUGU.C.CC.GCAGCGGUAU..GC.AGGA........ACGACCGCCGUCUUGGAAGUAGACA....................AGCACUGGUCUCAAC...........................................................GA.CUGGGAAGC....GAC..G.GC..CAGUAGGAGC.................................................ACCCACCGGGUGCGAGCCUGC.GAGUCCGAAGACCUGCCAGCCGUGCCGGACGCGCC
Mycobacterium_tuberc.1 BX842572.1/309867-309685 CCACGCUCUGCAUGCCAAUAU...UCUUCCC......................GUCAGG...CGAUGACG......AUGC..AGGAA.G.CC.G.G.UGA...............................GAAUCCGG.CGCGGU.C.CC.GCCACUGUCA..CC.GG..........GGAGCGACCCUCGUAA.............................GCCACGGCC...ACA............................................................G.GCUGGAAGGC...GAG..G.CA..AGCAACGAU...................................................................CCGG.GAGCCAGGAGACUCGCGUCAUCGCGUCCUGCCACC
Acidothermus_cellulo.1 CP000481.1/1942077-1942287 AUGGUGUCGCCUGCGACUGGUU..CGACCCC......................UCGGG....GUCGUGCC......AACA..GGGAA.C.CC.G.G.UGU...............................GAAUCCGG.GACUGC.C.CC.GCAGCGGUGA..GC.GGGA........ACGACCGCUGUCAUCAA.............................GCACUGGGCCGGAC..........................................................GGC.CUGGGAAGC....GAC..A.GC..CAGUAGGUGA.............................................CCGGCGAUUCGCCGGUCGGGCCCGC.AAGUCCGAAGACCUGCCAGUCGCCCCGCGGACACC
Acidothermus_cellulo.2 CP000481.1/1939207-1939426 UAGGCUGAGCCCGCAGCUGGU...UCGGCCGCAGGC.................GAUGC....AGCCGAGCU.....AACA..GGGAA.C.CC.G.G.UGC...............................GAAUCCGG.GACUGC.C.CC.GCAGCGGUGA..GU.GGGA........ACGACCGCCGUCAACG..............................GCACUGGGC.GACA...........................................................GC.CUGGGAAGC....GAC..G.GC..CAGUAGGCAA......................................CGGUGACCGGCCGCUCCGGCGCCGCCGCCCAC.AAGUCCGAAGACCUGCCAGCUGCACACCGCCGAUG
Salinispora_tropica_.1 CP000667.1/4966842-4966623 AUGGUGUCUCCCGCAGCUGGU...UCGACCGCUCCCGCCG.............GGAGU....GGGCGAGGC.....AAGA..GGGAA.C.CC.G.G.UGG...............................GAGUCCGG.GACUGC.C.CC.GCAGCGGUGA..GU.GGG.........AACGACCGCCGUCAUCA............................CGCACUGGGCUCAUCGA........................................................GGC.CUGGGAAGCG...ACG..G.CC..AGUAGGCGAC................................................CGGGUCUCCCGGGCGUGCCCGC.GAGUCCGAAGACCUGCCAGCGCGCCGCACGCGUCG
Salinispora_arenicol.1 CP000850.1/3174011-3173839 AUAGCCUCUCGCCGUCAAGGUG.........................................CA..............C..GGGAA.G.CC.G.G.UGA...............................AACACCGG.CGCGGCCC.UC.GCCACUGUGA..CC.GGG.........UAGCGAUCUCCGACUAC............................GCCACUGGGCCCGACCG........................................................GGU.CUGGGAAGGC...CGG..A.GU..GAACGUCGAU..................................................................CCGG.AAGCCAGGAGACCGGCCUUGACAAGGAUCUCAUCC
P.freudenreichii.1 AY033236.1/563-353 GUGUAGGCUAGUAGUGCUGGUU..CGGCUGCCC....................CACGG....CAGUCGUCGC....AAGA..GGGAA.U.CC.G.G.UGU...............................AAUUCCGG.AACUGU.C.CC.GCAGCGGUCA..AU.GG..........GAACGACACAACGUAA.............................GGCACUGGGCGGCAA..........................................................CGC.CUGGGAAGUA...GUA..G.UG..GAGGAAGUCG................................................GGAGUGAUCUCGCAAUGCCCAU.GAGUCCGAAGACCUGCCAGCAGCGACAACAUCUGU
Propionibacterium_ac.1 AE017283.1/2294565-2294765 AUAGUGACGAAUGCACGUGGUU..CCCGU........................GUUCG....CACGGGCC......AAGA..GGGAA.U.CC.G.G.UGU...............................GAAUCCGG.AGCUGC.C.CC.GCAGCGGUAU..AU.GAG.........AACGACCGCCGUCAUGA............................CGCACUGUGC..UUU..........................................................GGC.AUGGGAAGCG...ACG..G.CU..AGUAGGAGUC....................................................CGAUCAGGACGAGCUCAU.GAGCCCGAAGACCUGCCAGGUGUGGUCCCGCAACC
Saccharopolyspora_er.1 AM420293.1/5303093-5303317 GCCGAGAGCCGCGACCGCGGCG..GUC......................................GAGGC......AAGA..GGGAA.C.CC.G.G.UGC...............................GAAUCCGG.GACUGC.C.CC.GCAGCGGUGA..GC.GGGA........ACGAACGCCGUCCCCGGUCCGAGGAGACCGGGAAC..........AGCACUGGACCACAG..........................................................CGU.CUGGGAAGC....GAC..G.GC..CAGUAGGAAC......................................ACCCGGCCACGACGAGGCCGGGAAGCGCCCGC.GAGUCCGAAGACCUGCCACCGGUGCGUGCACACCC
Saccharopolyspora_er.2 AM420293.1/1414592-1414388 AGUGUGUCCCGCGCUGAUGGAU..CACCACG......................GAAG........GUGAGGC....AACA..GGGAA.C.CC.G.G.UGC...............................GAAUCCGG.GACUGC.C.CC.GCAGCGGUGA..AC.GGG.........AACGACCGUCGUGACCGGCUCCGGCCGGUAC..............GGCACUGGGCGCGCACG........................................................CGC.CCGGGAAGCC...ACG..A.CC..AGUAGGCCGC..................................................................CCGU.GAGUCCGAAGACCUGCCAUCGGUGCGCGCACGAGG
Saccharopolyspora_er.3 AM420293.1/6681388-6681576 UCGCCCUGUUGCGGAGAGUGUU..CGCAGCA......................UUCGA....GCGGCGAC......AGGUGGAGGAA.G.CC.G.G.UGC...............................GAGUCCGG.CGCGGU.C.CC.GCCACUGUCA..CC.GG..........GGAGCGGACUCCAACGAC...........................GUCACUGCCC..UGC..........................................................GGG.GCGGGAAGGC...GGA..G..C..GAGCGCUGAU..................................................................CCGG.GAGCCAGGAGACU.CCGGUCGCCGCGACCUACGAC
Saccharopolyspora_er.4 AM420293.1/6698575-6698393 UCUGCGACGAUGCACGGUGGU...C............................CAAGC....AAGGAGUG......CGUC..AGGAA.G.CC.G.G.UGG...............................GAGUCCGG.CACGGCCG.GC.GCCACUGUGA..CC.GGG.........GAGCGGACCUCCCCCGCGA..........................GCCACCGGG..GCGA............................................................C.CUGGGAAGGC..CGGA..G.GG..ACGCGGCGAG..................................................................CCGG.GAGUCAGGACACU.GCCACCCCUUGUUCCCACCAC
Saccharopolyspora_er.5 AM420293.1/6688888-6688698 GACCUCGGUCGCUCUGGAGGU...CAGGAUA......................CGAC.....GGCCUGCG......GCGC..AGGAA.C.CC.G.G.UGC...............................GAAUCCGG.GACGGU.C.CC.GCCACUGUGA..CC.GGG.........GAGCGGACCCGACGUGCG...........................GCCACGGCCC.GUGA...........................................................GG.GCUGGAAGGC...UCG..G.GU..GACCCGCUGC...............................................................GAUCCGG.GAGUCAGGAGACUCGCUGCCGGCCCCGCGUCGCGC
S.griseus.1 AF263012.1/9229-9015 AGGCUGACCGGUGCAGCUGGUU..CGCCCUGUCCGC.................CAGGC....AGGGUGUCGC....AAGA..GGGAA.C.CC.G.G.UGG...............................AAAUCCGG.GACUGC.C.CC.GCAGCGGUGA..GU.GGG.........AACGACCGCCGUCAUA.............................CGCACUGGGCCCGGACG........................................................GGU.CUGGGAAGCG...ACG..G.CC..ACUAGGUGUC..................................................UGCCCGGCAGACGUGCCCGC.GAGUCCGAAGACCUGCCCGCUGCCCGCACGCGACC
S.coelicolor.1 AL939107.1/147400-147583 CAGACCGUAGUAUCAGCGGGU...CAUCGCC......................GCG.........ACGGG......AGAC..AGGAA.G.CC.G.G.UGU...............................GAAUCCGG.CACGGU.C.CC.GCCACUGUGA..CC.GG..........GGAGUGCACCCUUCGACAC..........................GCCACUGCGC..GCC...........................................................GC.GCGGGAAGGC..CAGG..G.AG..GAGCGUCGAU..................................................................CCGG.GAGUCAGGACACUGGCCUGUCGCGGGCCCGUUCCG
S.coelicolor.2 AL939107.1/141879-142126 ACGCUGAUGCCCGCAGUUGGUU..CGCGCCUCCUGUCCGAUCAGGUC......UCGGC....GGCGCGACGC....AAGA..GGGAA.C.CC.G.G.UGG...............................GAAUCCGG.GACUGU.C.CC.GCAGCGGUGA..GU.GGGA........ACGAAAGCCGUCAACA..............................GCACUGGGCCCCAGAUGAGUUGG.................................................AGC.CCGGGAAGC....GAC..G.GC..CGGUAGGUGC..................................CCGCCGGUGAUCCGUGUCCCCGGUGAGCGCGCCCAC.GAGUCCGAAGACCUGCCACUGCGCCCGUACGCGAU
S.coelicolor.3 AL939107.1/140625-140436 .GGACGCUGAUGGGAUGAUGG...CCGGCGACAG...................GGCGA....CGACGGUC......C..G..AGGAA.G.CC.G.G.UGC...............................GAAUCCGG.CGCGGU.C.CC.GCCACUGUGA..UC.GGU.........GAGCGGAUCCCGAAGUU............................GCCACUGCCCCGGUA..........................................................GGG.GCGGGAAGGC...CGG..G.AC..GAGCUGUGAC..................................................................CCGG.GAGCCAGGAAACUCACGUCGUCGCCUCCUCGACGG
S.coelicolor.4 AL939107.1/133849-134073 AGGCUGGCCCGUGCAGCUGGUU..CGCCCCGUCCGCCA...............GGCGG....GAUGCGUCGC....AAGA..GGGAA.C.CC.G.G.UGG...............................GAAUCCGG.GACUGC.C.CC.GCAGCGGUGA..GC.GGG.........AACGACCGCCGUCAUA.............................CGCACUGGGCCCGACGUACCG....................................................GGC.CCGGGAAGCG...ACG..G.CC..AGUAGGUGUC..............................................CUCCGGACAGGAGGGUGGGCCCGC.GAGUCCGAAGACCUGCCACCUGCCCGCGCGCGGAC
S.coelicolor.5 AL939125.1/243385-243171 CCUGCUUGUGCCCACCCCGGUG..GGAGCACUACUGUC...............GCCAC....GCCUUGGU......GAAC..GGGAA.AUCC.G.G.UGU...............................GAUGCCGG.UGCGGCCC.UC.GCCACUGUGAA.UC.GGG.........AAGUCCGGCUCCGGCCCUGACGGGCA...................GCCACUGGAUCGCUUGC........................................................GGU.CCGGGAAGGC...GGA..G.CA..CGGGCGGUGG...............................................................UACCCGU.AAGCCAGGAGACCGGCCAAGGCGCGUCGUCCAUCC
Streptomyces_avermit.1 BA000030.3/2496008-2496226 AGGCUGGGUGGUGCAGCUGGUU..CGCCCCGUCCGCCA...............GGCGG....GAGGCGUCGU....AAGA..GGGAA.C.CC.G.G.CGG...............................GAAUCCGG.GACUGC.C.CC.GCAGCGGUGA..GU.GGG.........AACGAACGCUGUCAUA.............................CGCACUGGGCCCAAAA.........................................................GGC.CCGGGAAGCG...ACG..G.CC..AGUAGGUGUC...............................................CUCCGUACGGAGGGCGUGCUCGC.GAGUCCGAAGACCUGCCCGCUGCCCGUGCGCGACC
Rubrobacter_xylanoph.1 CP000386.1/663892-664074 GUUAUCCUGCCCGGCGUAGGCG..GGCGA.................................GAGGUC...........C..AGGAA.G.CC.G.G.UGA...............................GAGUCCGG.CACGGU.C.CC.GCCACUGUGA..CC.GGG.........GAGCGACCCCCGCACGCAGG.........................GCCACUGUCGCCGCGG.........................................................GCG.AUGGGAAGGC...CGG..G.GG..AAGCGGAGAU..................................................................CCGG.GAGUCAGGAUACUGGCCUCUCGCCGGAGAAACCCC
Bacteroides_fragilis.1 AP006841.1/3073837-3073630 UAUAUUUGUCGGCAGAUUGGU...UCGCCGAAGCUUUCCU.............GCUUU....GGGCGAUU......AAAA..GGGAA.U.CG.G.G.UGU...............................AACUCCCG.GACAGU.C.CC.GCUGCUGUGA..AG.CUUUAUUAU...AAACAUUCCGAUAGGAUACUCUUUG....................GCCACUGACUCGUGU...........................................................AG.UCGGGAAGGC..GUUC..G.GA..AUGGA.......................................................................AGCU.AAGUCAGAAGACCUGCCACUCUCGCUGAUAAGUCU
B.fragilis.1 AY043208.1/560-782 UAUCUUUGCUCCCUGAUCGGU...UCCGAAUAGUCAUUC..............CUCUA....UCCGGAUU......AAAA..GGGAA.U.CG.G.G.UGU...............................AAAUCCCG.GACAGU.C.CC.GCUGCUGUGAA.GC.UCCGUC......UGAAUUUCCGAUAACAACUGUU.......................GCCACUGGGAUACCUUUUUGUAAAUAGAUAAGGA.......................................GUCACCGGGAAGGC...GUC..G.GA..AACAAG......................................................................GAGU.CAGUCAGAAGACCUGCCGCUUAUCAAAGGCUGUUU
Bacteroides_uniformi.1 AAYH02000045.1/230200-229995 UAUCUUUGCCCGCGAAUUGGU...UCCGGAUGCAUGUUUC.............CAUCA....UCUGGAUU......AAAA..GGGAA.U.CG.G.G.UGU...............................AAAUCCCG.GACAGU.C.CC.GCUGCUGUGAA.GC.UCCGU.......UUAUAUCAUGAAAAACACCCUU.......................GCCACUGAUAUGCAUUGAA......................................................AUA.UCGGGAAGGC...UUC..A.GG..AUUAG.......................................................................GAGU.CAGUCAGAAGACCUGCCAUUCAUUAAAGGCUGCCU
Bacteroides_fragilis.2 AP006841.1/4035424-4035643 UAUAUUUGUCGCCGAAUUGGU...UCGGAAUCCGUGGUCA.............ACGGA....CGAAGAUU......AAAA..GGGAA.U.CG.G.G.UGU...............................AAAUCCCG.GACAGU.C.CC.GCUGCUGUGAA.AC.UCUGUA......UAGCAUCUUAUCAAUCAGCCAAUUUCGU.................ACCACUGACAGAAAAAGCAAACU..................................................CUG.UCGGGAAGGUCCCGGU..A.AG..AUGUA.......................................................................GAGU.CAGUCAGAAGACCUGCCAUUCGUGAAUAAGAGCAU
Bacteroides_fragilis.3 AP006841.1/2882136-2881925 UUAUCUUUGUCCCGAAUUGGUU..UCGAAUGAAGACUUU..............CGUCA....UUCGGAUU......AAAA..GGGAA.U.CG.G.G.UGU...............................AAAUCCCG.GACAGU.C.CC.GCUGCUGUGAA.GC.UUCAU.......CGAUAUCUUGAAACAAUCCUUUC......................GCCACUGACGUGGGGGGAAUACCU.................................................CCG.UCGGGAAGGC...UUC..A.AG..AUUAG.......................................................................AAGU.CAGUCAGAAGACCUGCCGUUCAUCAAAGGCUGUUU
Bacteroides_thetaiot.1 AE015928.1/1832233-1832438 UAUCUUUGUCCCCGCAUUGGU...UUGCGACUCUCAUCAC.............GAGGG....AAGCGAUU......AAAA..GGGAA.U.CA.G.G.UGU...............................AAAUCCUG.AACAGU.C.CC.GCUGCUGUAA..GU.UCCAUAGA....UAUGUUGCGAGCAAUCUACUCAAA.....................GCCACUGGAAAGAAA..........................................................AUU.CCGGGAAGGC...GCC..C.GC..AACAG.......................................................................GAAU.AAGUCAGAAGACCUGCCAUGUAAAAUCCGUUUCAC
Bacteroides_thetaiot.2 AE015928.1/1836296-1836502 CUAUCUUUGUCGCGCAUUGGU...UUGCAACUCUCAUGCAC............GAGGG....AAGCAAUU......AAAA..GGGAA.U.CA.G.G.UGA...............................AAGUCCUG.AACAGU.C.CC.GCUGCUGUAA..GU.UCAUUUU.....UUGGUUGCGAGCAAUCGACUUUAUA....................GCCACUGGAAAGCAA..........................................................AUU.CCGGGAAGGC...GUU..C.GC..AACAG.......................................................................GAAC.AAGUCAGAAGACCUACCAUGCAAACUCGUUUCACU
Bacteroides_thetaiot.3 AE015928.1/2403656-2403862 AUCUUUGCCCCCCGAAAUGGU...UCGGAGUCCGUGUCCA.............ACGGA....CAACGAUU......AAAA..GGGAA.U.CG.G.G.UGU...............................AAAUCCCG.UACAGU.C.CC.GCUGCUGUGAA.GC.UCUAUA......CAAUGUCUUAUUAAUGAACUAAUUUAUC.................GCCACUGAU..GUUA..........................................................U.U.UCGGGAAGGC...ACU..A.UA..AGACAA......................................................................GAGU.CAGUCAGAAGACCUGCCACUUCGCGUAAAGCGUUC
Bacteroides_vulgatus.1 CP000139.1/5040129-5040332 GUAUCUUUGCAGUGCAUCGGU...UCAUUUAUCUCCCCUCC............GAGGU....GAAUGAUU......AAAA..GGGAA.U.CAAG.G.UGA...............................GAAUCCUG.AACAGU.C.CC.GCUGCUGUAU..GU.UUCACU......AAACGCAUAAGCAAAAUGCCAAUA.....................ACCACUGGGA.UAAU...........................................................UU.CCGGGAAGGU...GCU..U.AU..AGCGG.......................................................................AAAC.GAGUCAGAAGACCUGCCUGUGCAUUUAUCAAAUCU
Bacteroides_uniformi.2 AAYH02000049.1/356589-356390 CUAUCUUUGUCCACGUUUUGU...UCCGCGUUCUCUAUCC.............GGAGA....AGCGGAUG......AAAA..GGGAA.U.CG.G.G.UGA...............................AAGUCCCG.AACAGU.C.CC.GCUGCUGUGA..GU.UCCAU.......GCUCGGUGUAUCAUACUUGU.........................GCCACUGUUCUUCGGGA........................................................AGA.ACGGGAAGGC...GAU..G.UA..CCGG........................................................................GAAC.GAGUCAGAAGACCUGCAAAACAAAGUCGAAAAAUU
Bacteroides_vulgatus.2 CP000139.1/3926628-3926422 UUAUCUUUGCCCCGAAUUGGUU..UCGGAUAGUCUAUC...............UGCUA....UUCGGAUU......AAAA..GGGAA.U.CG.G.G.UGC...............................AAAUCCCG.GACAGU.C.CC.GCUGCUGUGAA.AC.UCUGC.......UGGAAUCUUGAAAAAUACCUUU.......................GCCACUGAUGUGACAAUCCUC....................................................ACA.UCGGGAAGGC...UUC..A.AG..AUAAG.......................................................................GAGU.CAGUCAGAAGACCUGCCAUUCAUUAAAGGCUGUUU
Bacteroides_fragilis.4 CR626927.1/1843997-1843789 UUAUCUUUGCAGUGCAUUGGU...UUGUAUUCUCCGUGUUC............CGGGG....AUGCAAUU......AAAA..GGGAA.U.CA.G.G.UGC...............................AAAUCCUG.AACAGU.C.CC.GCUGCUGUAA..GU.UUCACAUCAG..AUUGUUGUAAGCAACCACCACUU......................GCCACUGGGAAACGU..........................................................UUC.CUGGGAAGGC...GCU..U.AU..CAACAG......................................................................AAAC.GAGUCAGAAGACCUGCCUGUGCAUCUUUUUCAUUG
Bacteroides_uniformi.3 AAYH02000045.1/230243-230451 UAUCUUUGUCCCAGUUUUGGUU..UCACCUCUCCCGGUUCUGUUG........GAGAU....GAGUGAUGA.....AAAA..GGGAA.U.CA.G.G.UGC...............................AAAUCCUG.AACAGA.C.CC.GCUGCUGUAA..GU.CCUUCCA.....AAAUCUUUGAAUAUUCUACAA........................GCCACUGUCCGCCCGG.........................................................CGG.AUGGGAAGGC...AUU..C.AA..AGAG........................................................................GGAU.AAGUCAGAAGACCUGCCAAGACAACAUAGUUUUAG
Bacteroides_caccae_A.1 AAVM02000005.1/21577-21370 CUAUCUUUGUCGCGCAUCGGU...UUGCAACUCUCACAUAC............GAGGG....AAGCGAUU......AAAA..GGGAA.U.CA.G.G.UGU...............................AAAUCCUG.AACAGU.C.CC.GCUGCUGUAA..GU.UCCACACAU...UACGUUGCGAGCAACCUACUUUUA.....................GCCACUGGAAAGAAA..........................................................CUU.CCGGGAAGGC...GCC..C.GC..AACAG.......................................................................GAAC.AAGUCAGAAGACCUGCCGUGCAACCAAUUUCACUG
Bacteroides_ovatus_A.1 AAXF02000043.1/123852-123648 AUCUUUGCCCCCCGAAAUGGU...UCAGAAUCCGUAUCCA.............ACGGA....CGACGAUU......AAUA..GGGAA.U.CG.G.G.UGU...............................AAGUCCCG.AACAGU.C.CC.GCUGCUGUGAA.GC.UC..........UGUUCAAUGUCUUAUAAUUGAACUAAUUUAAC.............GCCACUGAU..GUUA............................................................A.UCGGGAAGGC...AAA..U.AA..GACAA.......................................................................GAGU.CAGUCAGAAGACCUGCCAUUUUGUGUAAGACGCUC
Bacteroides_vulgatus.3 CP000139.1/3919800-3919587 UAUCUUUGUUCCCGAAUCGGU...UCCGAAUAGAUGUC...............CUCUA....UCCGGAUU......AAAA..GGGAA.U.CG.G.G.UGU...............................AAAUCCCG.GACAGU.C.CC.GCUGCUGUGAA.AC.UCCGAU......AAAAUUUCCGAUACGUACCUAUU......................GCCACUGCCUGACUCCACAUAACGAG...............................................AAC.GCGGGAAGGC...AUC..G.GA..AAUGAG......................................................................GAGC.CAGUCAGAAGACCUGCCAUUCAUCAAAGGCCGUUU
Bacteroides_ovatus_A.2 AAXF02000053.1/97071-97271 CUAUCUUUGUCGCGCAUUGGU...UUGCGACUCCCAUGC..............GGGGG....AAGCAAUU......AAAA..GGGAA.U.CA.G.G.UGU...............................AAAUCCUG.AACAGU.C.CC.GCUGCUGUAA..GU.UCCAUG......CAUGUUACAAGCAAUUCACUCAUU.....................GCCACUGGAG.ACUA...........................................................AU.CUGGGAAGGC...GUU..U.GU..AACAG.......................................................................GAAU.AAGUCAGAAGACCUACCAUGCAAUUAUGUUUCACU
Bacteroides_caccae_A.2 AAVM02000011.1/57485-57690 UAUCUUUGCCGCCGAAAUGGU...UCGGAAUCCGUAGCCA.............ACGGA....CGACGAUU......AAUA..GGGAA.U.CG.G.G.UGC...............................AAAUCCCG.AACAGU.C.CC.GCUGCUGUGAA.GC.UC..........AGUUCAAUGUCUUAUAAAUGAACUAAUUUGAC.............GCCACUGAU..GUUC..........................................................U.A.UCGGGAAGGC...AAA..U.AA..GACAA.......................................................................GAGU.CAGUCAGAAGACCUGCCACUUCACGUAAAACGUUC
Bacteroides_ovatus_A.3 AAXF02000050.1/365024-364813 UAUCUUUGCCCCUGAAUUGGU...UUCAGAUAGCCAUAUC.............AACUA....UCUGAAUU......AAAA..GGGAA.U.CG.G.G.UGU...............................AAAUCCCG.GACAGU.C.CC.GCUGCUGUGAA.AC.UCUAUU......CAACUUCUUGAUAUUUACUUUU.......................ACCACUGACCGGGUAUAGAUAGUCA................................................AGG.UCGGGAAGGA...AUC..A.GG..AAGG........................................................................GAGU.CAGUCAGAAGACCUGCCAUUCAUACCUUUAUAGCU
Bacteroides_uniformi.4 AAYH02000040.1/99907-100108 GUAUCUUUGUCAUGCAUUGGU...UCGCUCCCCCUCUUC..............UGGGA....AAGCGAUU......AAAA..GGGAA.U.CA.G.G.UGU...............................AAAUCCUG.GACAGU.C.CC.GCUGCUGUAA..GU.UUCGUGC.....AACGUUGCAGACAAUUACUCUAU......................GCCACUGGAAUAUUC...........................................................UU.CCGGGAAGGC...GCC..U.GC..AACAG.......................................................................AAAC.AAGUCAGAAGACCUGCCAUGCAUACUUUAUCAUUG
Parabacteroides_dist.1 CP000140.1/2695629-2695426 UAUCUUUGCUACAUGCUUUGU...UCCCUUUCGGCAAUCG.............CCGGA....UAGGGAUU......AAAA..GGGAA.U.CG.G.G.UGA...............................GAAUCCCG.GACAGU.C.CC.GCUGCUGUAA..GC.UUCAUA......AACGGGUUGAGCAAUACUGUU........................GCCACUGUUCAUUCAAG........................................................UGA.AUGGGAAGGC...GCU..U.AA..GACCGG......................................................................AAGU.AAGUCAGAAGACCUGCAAGGCGUGUAUAUUUUCGA
Parabacteroides_dist.2 CP000140.1/1176516-1176715 ACUUUUGUCACUGUAACAGGC...UCCGCUUAUCUCUUUUUC...........CGGGA....GGCGGAUU......AAAA..GGGAA.C.CG.G.G.UGA...............................GAAUCCCG.GACAGACC.AC.GCUGCUGUGA..AC.UUUU........AAACAUUCGGACAAUACCUUG........................GCCACUGGUU.UUGU...........................................................AA.UCGGGAAGGC...GUC..C.UG..AAUGG.......................................................................AAGU.AAGUCAGAAGACCUGCCGGUUCAUAAAUAAAUGUU
Parabacteroides_dist.3 CP000140.1/4143906-4143709 UACCUUUGCAUCCGAAUUGGU...UCCGUACGCUCGUUC..............GGGCA....UACGGAUU......AAAA..GGGAA.U.CC.G.G.UGA...............................GAAUCCGG.UACAGU.C.CC.GCUGCUGUGAA.AC.UCCUU.......UAACAUUCUAAUACUACUUUC........................GCCACUGGCCUAGUA...........................................................AG.CCGGGAAGGC...AUU..A.GA..AUGG........................................................................GAGU.CAGUCAGAAGACCUGCCAUUCAUUUAAGAUUCAUA
Parabacteroides_merd.1 AAXE02000001.1/18090-18297 UAAUUUUGUCUUCGGAUCGGUU..UCGUAUGAUUAAAUCA.............GAUGA....UACGGAUU......AAAA..GGGAA.U.CG.G.G.UGA...............................AAAUCCCG.GACAGU.C.CC.GCUGCUGUGAA.GC.UCCGUUU.....CAACAUCCUGAAAACUACUUUU.......................GCCACUGGUUUAUGGUUAU......................................................AAA.CCGGGAAGGC...UUC..G.GG..AUGG........................................................................GAGU.CAGUCAGAAGACCUGCCGUUCAUUAAAGGCUAUUC
Parabacteroides_merd.2 AAXE02000001.1/9613-9819 UACAUUUGCCACCGAAUCGGU...UCUGUAUUUCCCGUUC.............GGGAA....UAUGGAUU......AAAA..GGGAA.U.CG.G.G.UGU...............................AAAUCCCG.GACAGU.C.CC.GCUGCUGUGAA.GC.UCCGUUU.....UAACAUCUUGGAACUACUUUC........................GCCACUGACUUGUUAUAAUU.....................................................AAG.UCGGGAAGGC...UUC..A.GG..AUGG........................................................................GAGU.CAGUCAGAAGACCUGCCGUUCAUUAUAAGGUUCAU
Parabacteroides_merd.3 AAXE02000112.1/379532-379335 UAUAUUUGUCCCAUGCAUUGU...UCCUGCUUCGCAAUCU.............GCGGA....AAAGGAUU......AAAA..GGGAA.U.CG.G.G.UGC...............................AAAUCCCG.GACAGU.C.CC.GCUGCUGUAA..GC.UUCAA.......AACGGAUUGGGCAAUUCUUUUAU......................GCCACUGAC..GCGA............................................................G.UUGGGAAGGC...GCU..C.AU..ACCGG.......................................................................AAGU.AAGUCAGAAGACCUGCAACGCAUAUUUUUUCGACG
Parabacteroides_merd.4 AAXE02000103.1/317216-317417 UAUUUGCCCUUUGAAACAGGU...UUCCCUGUCCUCCUUA.............CAGGA....CAGGAAUG......AAAA..GGGAA.C.CG.G.G.UGG...............................AAAUCCCG.GACAGACC.AC.GCUGCUGUGAA.AC.UUCGG.......UAACAUACCGGCAAUACUCAAU.......................GCCACUGAUC.GGGG...........................................................GA.UCGGGAAGGU...GUC..C.GG..GGAUGG......................................................................AAGU.AAGUCAGAAGACCUGCCGUUUCGGUUUUGAAGAGU
Parabacteroides_merd.5 AAXE02000101.1/25986-25779 UACCUUUGCCACAGUUUUGGUU..UCACGGCUCCCAACCGCUAC.........GGGAG....GCGUGAUG......AAAA..GGGAA.U.CA.G.G.UGC...............................GAAUCCUG.AACAGA.C.CC.GCUGCUGUAA..GU.UCCUCUCC....AAAUCUUUGAAUACGCUACAA........................GCCACUGUCCGUCAC..........................................................CGG.AUGGGAAGGC...AUU..C.AA..AGACG.......................................................................GAAC.AAGUCAGAAGACCUGCCAAAACAAACAUAGUUUUA
Cytophaga_hutchinson.1 CP000383.1/1884029-1884217 ACCUUUGUUCCCGUUAAUGGU...UUAUUUCAAC...................GUUUG....AAAUAAUU......AAAA..GGGAA.G.CC.G.G.UGU...............................AAAUCCGG.AACAGUUC.CC.GCUGCUGUAA..GC.UCAUCAU.....UACGUUAUAUUUCAUUUA...........................GCCACUGAAU....U..........................................................UAU.UUGGGAAGGC...GGA..U.AU..AACA........................................................................GAGU.AAGUCAGAAGACCUGCCACUAACACACUAUUCGAA
Synechococcus.1 BX569694.1/273573-273792 CCCCUAGGGUUUGGGUCUGGUU..UCAGCGGGGA...................UCAGC....CGCUGAUGGA....AACG..GGGAAAGAAC.G.G.UGC...............................AAAUCCGU.CGCUGU.C.CC.GCAGCUGUAA..AG.CGUCCGGCCCCGCCGGCGUCAGUCAGAAC............................G...CCCGCCAGGAGCACUAC....................................................CGA.CGAGGAU..C...GAC..U.UU..GACCAAUCUU..................................................CUGGCUUCUCCCCGGCCUCU.GCGCCAG....GCCGCCGUUGCCGCAUUGGCCUUG
B.megaterium.1 AJ000758.1/1191-1370 UCAAACAGCAACAGUAAAGGU...GCCAA.................................GAAGGCUU......AAUA..GGGAA.A.CU.G.G.UGA...............................AAGACCAG.UACUGCCC.CC.GCAACUGUAA..GU.GU..........GGACGAACGAGUAUA..............................ACCACUGUGAAAAAA...........................................................UC.ACGGGAAGGU...UCU..C.AA..GUAGAAUGAU..................................................................ACAC.AAGUCAGGAGACCUGUCUUUAUUGUGAAGUUUCUA
B.megaterium.2 AJ000758.1/1489-1668 CAUAUCGUGCAAAAAAAAGGUG..CGUAAUA......................UUUAC....AUUGCGUU......AAAU..GGGAA.GUCU.G.G.UGU...............................GAAGCCAG.CGCGUA.C.CC.GCCACUGUGA..AG.A...........GGAGCUGAUUGCAUUU.............................GCCACUGUA..................................................................U.UCGGGAAGGC...GCA..A.UC..AAGUGAUGAA...................................................................UCG.AAGUCAGGAAACCAGCCUUUUUCUAAUGCUAAGCU
Bacillus.1 ABCF01000001.1/214794-214982 UACAUAUUGUCGUAAACAGGU...GAUUUCAGUCG..................AAUCU....GAAGUCUU......AAAA..GGGAA.G.UU.G.G.UGA...............................AAUUCCAA.CGCGGU.C.CC.GCCACUGUAA..AU.UG..........GGAGCAAGCUGUGAUUA............................ACCACUGUAC.UAAU...........................................................GU.AUGGGAAGGA...ACA..G.CG..AGCAAUGA....................................................................CCAU.AAGCCAGGAGACCUGCCUGUUACUGCUGCACCACA
Bacillus.2 AAXV01000016.1/49194-49376 UCAUAUAAAACGUCGAUAAGUG..CUCGAAG......................AACU.......CGAGAU......AAUA..GGGAA.A.UU.G.G.UGA...............................AAGUCCAA.UACAGCCC.CC.GCUACUGUAA..UA.GC..........UGAUGAAAUCGCAAU..............................GCCACCUGU..GCAA..........................................................A.C.UAGGGAAGGU...GCG..A.CA..GUAAAAUGAA..................................................................GCUU.AAGUCAGGAAACCUGCUUAUCAGAUUGUGCAUGCA
Bacillus.3 ABCF01000035.1/16750-16938 UGCAAUGCCGGUAAAUAUGGU...GUCUA........................UAUA........GACAA......AAUA..GGGAA.U.CU.G.G.UGA...............................AAGUCCAG.AACUGUCC.CCCGCAACUGUAA..GU.GC..........UGACGAAAUAAGCGUUG............................ACCACUGCCUCUGAAUAUA......................................................GAG.GCGGGAAGGG...CUU..A.AA..GUAGGAAGAA..................................................................GCAC.AAGUCAGGAGACCUGCCAUAUUUAUAGCGUCUUAU
Bacillus_coagulans_3.1 CP003056.1/1126059-1125863 AUAUAGUAUGCGAGUAUUGGU...GGCUUUG......................AGAU........GCCUG......AAAA..GGGAA.U.CC.G.G.UGG...............................GAAACCGG.AGCUGCCC.CC.GCAACUGUCA..GU.GU..........GGACGAAAGAGCAAA...............................CCACUGUACCGGCUGCUUUUUUUGGCGGC...........................................GGU.AUGGGAAGG....GCU..U.CA..UUAGAAUGAA..................................................................ACAC.AAGCCAGGAGACCUGCCAAUACUUGAAGUUUCUAU
Bacillus.4 AAOX01000008.1/103201-103005 UAAGAAUCCGCAAGCGAUGGU...GCCCUUU......................UAG.........GGCAU......AAUA..GGGAA.U.CC.G.G.UUC...............................AACGCCGG.AGCUGUCC.CC.GCAACUGUAA..GU.GU..........GUACGAAAUGAGCA...............................UCCACUGUAUAUGAACGCUGAAUAGGCGCA...........................................UAU.AUGGGAAGGG...CUC..A.GA..GUAGGAUGAA..................................................................GCAC.AAGCCAGGAGACCUGCCAUGCUUGUACGAGUUUCG
Geobacillus_kaustoph.1 BA000043.1/935017-935212 AUCGUUGCGCCAAGCAAUGGU...GUCCA........................UCAG........GACUU......AAUA..GGGAA.U.CC.G.G.UGU...............................GAAUCCGG.AACUGCCC.CC.GCAACUGUAU..GU.GC..........GGACGAAAUGGGAUG..............................GCCACUGGCGGCAAGAGCCAUUCGGCGCG............................................CCG.CUGGGAAGGC...CCC..A.AA..GUAGGACGAU..................................................................GCAC.GAGUCAGGAGACCUGCCUUGCUUGGAACGUUUCAU
Geobacillus_thermode.1 CP000557.1/2323587-2323388 UUCAUAGACUCGCAGCAAGGU...GCCGC.................................GAAGGCUU......AAUA..GGGAA.U.CC.G.G.UGG...............................GAAUCCGG.AACUGUCC.CC.GCAACUGUCA..AU.GC..........GGACGAAAUGAAAUU..............................GCCACUGUGCGGCUGGAUGGCUUGCGCCGUCUCC.......................................CGC.AUGGGAAGGC...UUC..A.GA..GUAGGAUGAA..................................................................GCAU.GAGUCAGUAGACCUGCCUUGCUUGCGCAAAAGUUU
Geobacillus_thermode.2 CP000557.1/1789202-1789010 UGGCGGUAAGACAAACAAGGUG..CCUAGCCCGCU..................UAGGG....CUUGGGUG......AAAA..GGGAA.GCUC.G.G.UGA...............................AAAUCCGG.CACGGUGC.CC.GCCACUGUGA..UG.GG..........GAGCUUUGCGGCAACAA............................GUCACUGAAG..GAU..........................................................GCU.UCGGGAAGAC...GCC..G.CC..AAGCGAUGA...................................................................UCCU.AAGUCAGGAGACCUGCCUUGUUUGGAUCGGACGGA
Geobacillus_thermode.3 CP000557.1/868974-869170 AUGGUGAUUGCAAGCAAUGGU...GUCCA........................UCAG........GACUU......AAUA..GGGAA.U.CC.G.G.UGC...............................GAAUCCGG.AACUGCCC.CC.GCAACUGUAU..GU.GC..........GGACGAAAUGGGAUG..............................GCCACUGGCGGUGAAAGCUUGCACGGCACG...........................................CCG.CUGGGAAGGA...CCC..A.AA..GUAGGACGAU..................................................................GCAC.GAGUCAGGAGACCUGCCUUGCUUGGAAGUUUCAUG
Geobacillus_kaustoph.2 BA000043.1/2300644-2300445 UAAAUCAACUCGCAGCAAGGC...GCCGA.................................AAAGGCUU......AAUA..GGGAA.U.CC.G.G.UGG...............................GAAUCCGG.AGCUGUCC.CC.GCAACUGUCA..AU.GC..........GGACGAAAUGAAAUC..............................GCCACUGUACGGACGGAUGGCUUGCGCUGUUUUC.......................................CGU.ACGGGAAGGC...UUC..A.GA..GUAGGAUGAA..................................................................GCAU.GAGCCAGUAGACCUGCCUUGCUUGCCGCAGUUUCC
L.monocytogenes.1 AL591978.1/56481-56658 GUACUAAACAACUAAAUAGGUG..AAU......................................AUAUU......AAUCC.GGGAA.A.GA.G.G.UGA...............................AAAUCCUC.UACAGGCC.CUAGCUACUGUAA..UA.C...........GGACGAAAACCAAACAUAU..........................GUCACUGGAA.GCAA...........................................................UU.CCGGGAAGAC...UGG..U.GA..GUAGGAUGAU...................................................................GUU.AAGUCAGGAGACC.GCUUUUAUAUUCGAUAUCCAA
L.innocua.1 AL596167.1/202425-202602 GUACUAAACAACUAAAUAGGUG..AAU......................................AUAUU......AAUCC.GGGAA.A.GA.G.G.UGG...............................AAAUCCUC.UACAGGCC.CUAGCUACUGUAA..UU.C...........GGACGAAAGCCAAACAUAU..........................GUCACUGGAA.GAAA...........................................................UU.CCGGGAAGAC...UGG..U.GA..GUAGGUUGAU...................................................................GAU.AAGUCAGGAGACC.GCUAGUAUAUUCGAUAUCCAA
L.innocua.2 AL596167.1/167425-167616 UUAAAUAGGUCUUAUGUUGGU...GGAAUGU......................GUUUG....CAUUUCUG......AAAG..AGGAA.U.UC.G.G.UAU...............................GAAGCCGG.AACUGCCC.CC.GCAACUGUAA..GG.UG..........GACAAGAAUUGAAAAUA............................ACCACUGUGCGUUUUUGA.......................................................CGU.AUGGGAAGGU...UCA..A.UU..GUUGAAUGA...................................................................AGCC.AAGUCAGGAUACUCGCCAAAUAAGACGGAAGCAAC
Listeria_welshimeri_.1 AM263198.1/1122851-1123040 UUAAAUAGGUCUUAAGUUGGU...GAAAUGU......................AUUUG....CAUUUCUG......AAAG..AGGAA.U.UC.G.G.UGC...............................AAUGCCGA.AACUGCCC.CC.GCAACUGUAA..GG.UG..........GACAAGAAUUGAGAAA.............................ACCACUGUGCGUUUAAU........................................................CGU.AUGGGAAGGU...UCA..A.UU..CUUGGAUGA...................................................................AGCC.AAGUCAGGAUACUCGCCAAAUAAGACGGAAGCAAC
Listeria_monocytogen.1 CP001175.1/1515606-1515417 UUAAAUAGGUCUUAUGUUGGU...GGAAUGU......................AUGUG....CAUUUCUG......AAAG..AGGAA.U.UC.G.G.UGC...............................GAUGCCGA.AACUGCCC.CC.GCAACUGUAA..GG.UG..........GACAAGAAUAGAUAUA.............................ACCACUGUACGUUUUAA........................................................UGU.AUGGGAAGGU...UCU..A.UU..GUUGGAUGA...................................................................AGCC.AAGUCAGGAUACUCGCCAAAUAAGCCGGAAGCAAC
Listeria_monocytogen.2 AARL02000087.1/606-795 UUAAAUAGGUCUUAUGUUGGU...GGAAUGU......................AUGUG....CAUUUCUG......AAAG..AGGAA.U.UC.G.G.UGC...............................GAUGCCGA.AACUGCCC.CC.GCAACUGUAA..GG.UG..........GACAAAAAUAGAUAUA.............................ACCACUGUACGUUUUAA........................................................UGU.AUGGGAAGGU...GCU..A.UU..GUUGGAUGA...................................................................AGCC.AAGUCAGGAUACUCGCCAAAUAAGCCGGAAGCAAC
L.monocytogenes.2 AL591978.1/19809-19999 UUAAAUAGGUCUUAUGUUGGU...GGAAUGU......................AUGUA....CAUUUCUG......AAAG..AGGAA.U.UC.G.G.UGC...............................GAUGCCGA.AACUGCCC.CC.GCAACUGUAA..GG.UG..........GACAAGAAUCGAGAUA.............................ACCACUGUACGUUUUUAG.......................................................CGU.AUGGGAAGGU...UCG..A.UU..GUUGGAUGA...................................................................AGCC.AAGUCAGGAUACUCGCCAAAUAAGACGGAAGCAAC
Listeria_welshimeri_.2 AM263198.1/1157829-1158018 CGCAUUGCCGGGUACUAAAAAA..CUAAAUA......................GGUGA....AUAUAUUA......AUCC..GGGAA.A.GA.G.G.UGA...............................AAAUCCUC.UACAGGCC.CUAGCUACUGUAA..UA.C...........GGACGAAAGCCAAAUAGAC..........................GUCACUGGAA.GAAA...........................................................UU.CCGGGAAGAC...UGG..U.GA..GUAGGAUGAU...................................................................GUU.AAGUCAGGAGACCGCUUUUAUAUUCGAUAUCCAAA
Paenibacillus_larvae.1 AARF01000099.1/15166-14989 CUGAUAAAAAUUGAAUAGAAAA..CUGGG....................................UAGAG......AUCA..GGGAA.A.GA.G.G.UGC...............................GAUUCCUC.UACAGGCC.CUAGCUACUGUGA..AG.CG..........GACGAAAUCCCCUUGAU............................GUCACUGGAA..CAU...........................................................UU.CCGGGAAGGC...GGG..A.AA..CUAGAAUGA...................................................................UGCA.AAGUCAGGAGACCUCCUCUAUUCAGCCUAUGCAGC
Paenibacillus_larvae.2 AARF01000375.1/31-230 UUGCAUAUUGUGGAGACAGGUG..CUUCGUCUGU...................AACGA....UGAAACUU......AAAA..GGGAA.GAUC.G.G.UGU...............................AAAUCCGU.CGCGGU.C.CC.GCCACUGUAA..CA.GA..........GGAGCCUUGUGCCAGGCAAAC........................GCCACUGGUCUAAGA..........................................................UGA.CUGGGAAGGC..GGCU..U.UA..AGGCGAUGAA..................................................................UCUGGAAGCCAGGAGACCUGCCUGUUCUAACGACACUGCU
A.metalliredigens.1 CP000724.1/79239-79421 AGUACAUAGAAUACGUUAGGU...GUUUCAU......................AUGA........AACUU......AAUU..GGGAA.A.GU.G.G.UGA...............................AAACCCAC.UGCAGCCC.CC.GCUACUGUAA..GU.GC..........AGAUGAACUCGACAAAA............................GCCACUAGAU....C..........................................................AAU.CUGGGAAGGC..GUCG..A.UA..GUAAGGUGAA..................................................................GCAC.AAGUCAGGAGACCAGCCUAAAGUAAGAAUCAGCCU
A.metalliredigens.2 CP000724.1/3721369-3721186 GAUGAAUUAAAUCGAAUUGGU...GCUUUAU......................CAA.........AGCUU......AAUA..GGGAA.A.GU.G.G.UUG...............................AAAUCCAC.UACAGCCC.CC.GCUACUGUAA..GU.GA..........GGAUGAGUCCAGCAAA.............................ACCACUGAUUGUGUC...........................................................AA.UUGGGAAGGU..GCUG..G.GU..GUCAGAAGAA..................................................................UCAC.AAGUCAGGAGACCUGCCAACCCUAAUUCCAAACAA
A.oremlandii.1 CP000853.1/1112785-1112962 AGUAAAUAAGAAGCAUUAGGU...UCUAA...................................AAGAUU......AAUA..GGGAA.A.UC.G.G.UUA...............................AAUUCCGA.UACAGCCC.CC.GCUACUGUAA..GU.GU..........GUACGAAACCAACGGG.............................UCCACUGGAU..AAU...........................................................AU.CUGGGAAGGU..GUUG..G.GA..GUAGGUUGAU..................................................................CCAC.GAGUCAGGAGACCUGCCUAAUUGCUUGUAUGAAGU
A.oremlandii.2 CP000853.1/1037045-1037222 UGAAUAUCAAAGUAUUAGGGUU..CUCUA........................CUUA........GAGAU......AUUA..GGGAA.A.UU.G.G.UGC...............................AAAGCCAA.UACAGCCC.CC.GCUACUGUAA..AC.AU..........GGACGA.GUUCUAAAA.............................GCCACUGGAU..UUA...........................................................AU.CUGGGAAGGC...AGA..A.....GGAGGAAGAA..................................................................GUGU.GAGUCAGGAUACCUAACUAAUACUUGGCAUGGUUU
A.oremlandii.3 CP000853.1/373263-373442 CAAAUGAAUACAUUUUAUGGUU..CUUUCUU......................AUGA........AAGCU......AAGA..GGGAA.A.GA.G.G.UGA...............................GAAACCUC.UGCAGCCC.CC.GCUACUGUAA..GC.A...........GGACGAAAUUCCAAUAA............................ACCACUGUGU................................................................AA.AUGGGAAGGU..AGGA..A.GA..GUAGGAAGAG...................................................................UGC.AAGCCAGGAGACCUGCCAUAAAACGUGAAUGAAGC
A.metalliredigens.3 CP000724.1/1570726-1570905 ACAAAAAAUAGCUUAUAAGGUG..CUCUUUC......................AUA.........GAGUU......AAAA..GGGAA.A.GU.G.G.UGU...............................AAAUCCAC.UACAGCCC.CC.GCUACUGUAA..AU.GG..........GUAUGAAAUCCGCGAAU............................GCCAUUGG...GAAA..............................................................CCGAGAAGGU...CGG..A.GA..GUAAGAUGAU..................................................................CCAU.AAGUCAGGAAACCUGCCUUAUAUUGUUAUAAAACG
A.metalliredigens.4 CP000724.1/86468-86650 AAAACUGAAUAUAUUUUAGGU...GUUUCAC......................GUGA........AGCUU......AAUU..GGGAA.A.AU.G.G.UGA...............................AAAUCCAU.CACAGCCC.CC.GCUACUGUAA..AU.GC..........AGAUGAAAUCGAUGAAG............................UCCACUGGA..UUUU............................................................U.CUGGGAAGGA..AUCG..A.GA..GUAAAAGGAA..................................................................GCAU.AAGUCAGGAGACCAGCCUAAAGACCAGUAACUACC
A.oremlandii.4 CP000853.1/2361990-2361811 CAAAUUAAAUAGUUUUAAGGU...CUUUAGA......................AUAU.......AAAGUU......AAAA..GAGAA.A.GA.G.G.UUC...............................AAUUCCUC.UACAGCCC.CC.GCUACUGUAA..UC.AG..........GUAUGAAAUCUUCAAA.............................UCCACUGG...GAAA..............................................................CCGGGAAGGG...AAG..A.UA..GUAAGUCGAU..................................................................CUGU.AAGUCAGGAGAACUGCCUUAAAAAUAAGAAUCACA
Clostridium_tetani_E.1 AE015927.1/769982-770164 UUUAAUAUUAUUUUAUUAGGUG..CUUUA...................................CAAGUU......AAAA..GGGAA.A.GU.G.G.UGA...............................AAAUCCAC.UGCAGCCCACC.GUUACUGUAA..UG.CU..........GACGAAAUCUUAUAAAA............................UCCACUAGAUAUAUUU.........................................................UAU.CUGGGAAGGU...UAG..A.AA..UUAGGAAGA...................................................................AGCU.AAGCCAGGAAACCUGCCUAAUAAGUGUUAAUUCUU
Clostridium_tetani_E.2 AE015927.1/793388-793200 AAUAGUAAAUGAAAUUUAGGUG..UCCACUUUGUA..................AAAAU....GAUGGAUG......AAAA..GGGAA.U.GU.G.G.UUC...............................AAUUCCAC.AGCAGCCC.CC.GCUACUGUAA..UA.GA..........UGACAAGCCUUUAGUA.............................ACCACUCUUU....A..........................................................AAA.GGAGGAAGGU...AAA..G.GU..UAGAAUGAU...................................................................UCUU.AAGCCAGGAGACCUGCCUAGAUUGUUAAAAUCCUC
Clostridium_tetani_E.3 AE015927.1/745345-745529 UGAAUAUGAAAAUAUUCAGGU...GCCAU........................UUUA........GGUUU......AAAA..GGGAA.U.GU.G.G.UUU...............................AAUUCCAC.AGCAGCCC.CC.GCUACUGUAA..UU.GA..........GGACGAAUCUUUCACAA............................ACCACUCUUUCAAAAAG........................................................GGA.AGGGGAAGGG...AAA..G.AC..AAGGGUGAA...................................................................UCAU.GAGCCAGGAGACCUGCCUGUAUAUGAAAGAUAAAC
Clostridium_tetani_E.4 AE015927.1/2416636-2416459 AUUUAAUAUUAGAUUUUAGGU...GUGAU........................CUUAU....AAUUACUU......AAAA..GAGAA.A.GU.G.G.UGA...............................AAAUCCAC.UACAGCCC.CC.GCUACUGUAA..UA.G...........UGGACGAUUCCUAUUA.............................UCCACCAGUU................................................................AA.CUGGGAAGGA...AGG..A.UA..AGGAAGAAA....................................................................CUA.AAGUCAGGAGAACUGCCUAAAAUAUAUUACUUCGG
Clostridium_difficil.1 ABKL02000008.1/4023-4215 UAAAUAUAUAAUAUUAUAGGU...UCUUCAA......................GCA.........AGAUU......AAUA..GGGAA.A.AA.G.G.UUA...............................AAUUCCUU.UACAGCCC.CC.GCUACUGUGA..UG.C...........AGACGAAACUUUUGUUA............................GCCACUAUGAUGAUAUUUUUUAUAU................................................CUC.AUGGGAAGGA...AGA..G.GA..UUAGGAAGAA...................................................................GCU.AAGUCAGGAGACCUGCCUAAAAUAUUAAAGUAAUU
C.botulinum.1 ABDP01000007.1/7251-7432 AUUUAAUAAAAAGAUUUAGGUG..CCUUUAC......................AUAA.......AAGGUG......AAAA..GGGAA.U.GU.G.G.UAA................................AAGCCAC.AGCAGCCC.CC.GCUACUGUAA..UU.GA..........GGACAAAUCUUUCAUAA............................ACCACUCUUU....A..........................................................AAA.AGGGGAAGGG...AAA..G.AU..UAGGAUGAA...................................................................UCAU.GAGCCAGGAGACCUGCCUAGAUUUUUAUUAGGGAA
Clostridium_tetani_E.5 AE015927.1/823404-823586 UUAAAUAUUUAUUUAUAAAGU...UUCUU........................GUAAA....AGAGAAUU......AAAA..GGGAA.G.GA.G.G.CGA...............................AAAUCCUC.CACGGU.C.CG.GCCACUGUAA..UU.GG..........UGAGUUUAUUCCAUAA.............................GCCAUUGAGA..UAU...........................................................UC.UUGAGAAGGC...GGA..A.AU..AAAUGAUGAA..................................................................CCAU.AAGUCAGGAGACCUGCUUUAUAAGAAUAAAUAUAC
Clostridium_botulinu.1 ABDO02000001.1/974410-974591 AUUUAAUAAAGAAAUUUAGGUG..CCUUU........................GUAGU....AAAAGGUG......AAAA..GGGAA.U.GU.G.G.UAA................................AAUCCAC.AGCAGCCC.CC.GCUACUGUAA..UU.GA..........AGACAAAUCUUUCAUAG............................GCCACUCUUU...............................................................AAA.AGGGGAAGGG...AAA..G.AU..UAGGAUGAA...................................................................UCAU.GAGCCAGGAGACCUGCCUAGAUUUUUAUUAGGAAA
Clostridium_perfring.1 ABDX01000004.1/114276-114455 UAAUAUUUUAUAUUUUUAGGU...UUGAU..................................UUUAAUU......AAAA..GGGAA.A.GU.G.G.UUA...............................AAGUCCAC.UACAGCCC.CC.GCUACUGUGA..UA.GG..........AUACAAGUUUCUAUUUG............................ACCACUGAUUAUAUA...........................................................AA.UUGGGAAGGG...AGA..A.AU..GAGGAUAAG...................................................................CCUU.AAGUCAGGAUACCUGCCUAAAGAUCAUGAACUAAG
C.novyi.1 CP000382.1/1272358-1272535 AAAUUAAAUAAGUCAUUAGGUG..CUCUAUU......................AUAA........GAGGU......AAAA..GGGAA.A.GU.G.G.UUA...............................AAAUCCAC.UGCAGCCC.CC.GCUACUGUAA..AU.GA..........GGAUGAAAUCUAAAUU.............................GCCA....UCCAUAA..........................................................GGA.....GAAGGU...UAG..A.AA..GUAAUAUGAU..................................................................CCAU.AAGCCAGGAAACCUGCCUAAUGUACGAUUAUUUAA
C.novyi.2 CP000382.1/2263667-2263491 AAAUUGUAUAUUAGCUUAGGUG..UCUGA........................UUAAU....UUCAGGUG......AAAA..GGGAA.U.AC.G.G.UGA...............................AAAUCCGU.AACAGCCC.CC.GCUACUGUAA..UG.UG..........GACAAAUCU.....AAA............................ACCACUGGUU..UAU...........................................................AA.CCGGGAAGGA........A.GA..GGAGGAUGA...................................................................AACU.AAGUCAGGAGACCUGCCUAAGCUUUGGAUAAAGAC
Clostridium_tetani_E.6 AE015927.1/793516-793697 GAAUAUUAAAAUUUAUAGAGUU..ACCCAUU......................UUUG........GGGUU......AAAA..GGGAA.G.GG.G.G.UUA...............................GAAUCCUC.CACGGU.C.CG.GCCACUGUAA..UU.GG..........UAAGUUUAUUCCAUAA.............................GCCAUUGAGA..UAU...........................................................UC.UCGAGAAGGU...GGA..A.AU..AAAUGAUGAA..................................................................CCAU.AAGUCAGGAGACCUGCUUUAUAUUUAAGAUGCAGC
Symbiobacterium_ther.1 AP006840.1/2078690-2078498 AAUACGGGCACAGCGGCAGGUG..CUCCCGGCCCCG.................CGCUC....CGGGAGUU......AAAA..GGGAA.G.CC.G.G.UGC...............................AAGUCCGG.CACGGU.C.CC.GCCACUGUGA..CG.G...........GGAGCCGUCCCCACGAUGC..........................GCCACUGGCC.GGAA...........................................................GG.CUGGGAAGGC...GGG..G.GA..AGGCGAUGAU...................................................................CCG.AAGUCAGGAGACCUGCCUGUCGCUGCAACGUCACU
Symbiobacterium_ther.2 AP006840.1/2074430-2074237 AUAGAGCAAACAGCGGCAGGUG..CUCCCGACCCU..................GCGGU....CGGGAGUU......AAAA..GGGAA.G.CC.G.G.UGC...............................AAGUCCGG.CACGGU.C.CC.GCCACUGUGA..CG.GG..........GAGUCGCCCCUCGGGAUGU..........................GCCACUGGCC.CGAA...........................................................GG.CCGGGAAGGC..GGAG..G.GG..CGGCGAGGA...................................................................UCCG.GAGUCAGGAAACCUGCCUGCCGCGCUGGCGCUGCU
Symbiobacterium_ther.3 AP006840.1/361924-361720 UAUAUUGGGGUUGUGACCGGU...GCACCUA......................UCGG.......GUGCUG......AAAA..GGGAA.C.CC.U.G.UGC...............................GAAUCAGG.GACUGC.C.CC.GCAGCGGUGA..GC.AGG.........AACGACCGCCACAGCAA.............................GCACUGGGC..UCC..........................................................GGC.CUGGGAAGC....GUG..G.CC..AGUAGGACAG............................................GCGGCAGAUGGUGCCGCCCCGCCUGC.AAGUCCGAAGACCUGCCGGUCAUCCGCUUUCAGGG
Desulfitobacterium_h.1 AP008230.1/4379378-4379199 GAAUAUCAGGCGGAAUAGGGU...UGCUU........................AAAU........GCAUU......AAUA..GGGAA.CUCC.G.G.UGU...............................GAAGCCGG.GACAGC.C.CC.GCUACUGUAA..GA.AG..........GACGAGUCCCUUAGAGGA...........................UCCACUGGU..GAAA............................................................A.CCGGGAAGGU...AAG..G.GA..UGAGGAUGA...................................................................GUUC.AAGUCAGGAUACCUGCCCCAUUCCGGAAACACAAG
Desulfitobacterium_h.2 AP008230.1/3094247-3094065 AACAAUUUAAGGAUUUCAGGUG..CCCUUCG......................CCAA.....GAAGGGAG......AAUA..GGGAA.C.CG.G.G.UGC...............................AAUUCCCG.GACGGA.C.CC.GCCACUGUAA..AG.AG..........GAGUCUCAGCGCUGAAU............................GCCACUGGGU................................................................AA.CUGGGAAGGC..AGCA..A.GG..AGACAAUGA...................................................................CUCG.AAGUCAGGAGACCUGCCUGGAUCCGGGGACACAUG
Thermoanaerobacter_t.1 AE008691.1/396055-396295 GAAUAUAAAAAGCCUUAUGGU...CCCGU.................................GAUGGGUU......AAAA..GGGAA.GACG.G.G.UGA...............................GAAUCCCG.CGCAGCCC.CC.GCUACUGUGA..GG.GA..........GGACGAAGCCCUAGUAA............................GCCACUGUCCGGCACUCAACUGAGCGCGUUAGUAAGGAGAAAAGAGGGAGAGAAAUUGCGUUCAGUUGAGUGCCGG.AUGGGAAGGC...AGG..G.UG..GAGGAUGAG...................................................................UCCC.GAGCCAGGAGACCUGCCAUAAGGUUUUUAAAAGUU
Thermoanaerobacter_t.2 AE008691.1/395133-395373 UGAAUAUUAAAGCCUUAUGGU...CCCAU.................................GAUGGGUU......AAAA..GGGAA.GACG.G.G.UGA...............................GAAUCCCG.CGCAGCCC.CC.GCUACUGUGA..GG.GA..........GGACGAAGCCCUAGUAA............................GCCACUGUCCGGCACUCAACUGAGCGCGUUAGUAAGGAGAAAAGAGGGAGAGAAAUUGCGUUCAGUUGAGUGCCGG.GUGGGAAGGC...AGG..G.UG..GAGGAUGAG...................................................................UCCC.GAGCCAGGAGACCUGCCAUAAGGUUUUAGAAGUUC
Moorella_thermoaceti.1 CP000232.1/1116483-1116660 CAAAUUUAAUAAACAACAGGUG..CCUGC...................................AGGGUU......AAAA..GGGAA.U.CA.G.G.UGU...............................AAAUCCUG.AGCGGU.C.GC.GCCACUGUAA..CC.GGG.........GAGUUUUUCCUCAGAG.............................GCCACUGGUG..AUC...........................................................UA.CUGGGAAGGC...GAG..G.AA..AAGUAAUGAG..................................................................CCGG.GAGCCAGGAAACCUGCCUGUUGGUUCAACCCUCGC
Thermoanaerobacter_p.1 CP000924.1/1954621-1954429 GAAUACAAAAAAUCUUAUGGU...CUUGAG...................................AAGUU......AAAA..GGGAA.A.GC.G.G.UGA...............................AAAUCCGC.UGCAGCCC.CC.GCUACUGUGA..GC.GA..........GGAUGAAGCCCUAAUAA............................GCCACUGCUUGGCACUCAAGAGAUGUGC.............................................CGG.GUGGGAAGGC...AGG..G.UG..GAAGAUGAA...................................................................UCGC.GAGCCAGGAGACCUGCCAUAAGAUUUCGGAAGUUC
Thermosinus_carboxyd.1 AAWL01000006.1/21090-20915 CAUAUGGCAAAGGGAAUAGGU...GCCUU..................................GCGGCUU......AAUA..GGGAA.GUCC.G.G.UGA...............................AAAACCGG.CACGGU.C.CC.GCCACUGUAA..UG.GG..........GAGUCUGGCUGCGUUAU............................GCCACUGGA..GCAA............................................................U.CUGGGAAGGU...GCG..G.CU..AGCAAUGA....................................................................ACCA.GAGUCAGGAGACCUGCCUAUUCUAACACACACCGU
Rhodopirellula_balti.1 BX294144.1/76053-76292 GCAACGUUACGUGGUGCCGGU...GUUCCAA......................AUCUUG...GAUCACUGGG....AACA..GGGAA.CUUC.G.G.UGA...............................GAUUCCGA.GACGGC.C.CG.GCCGCUGUAU..CC.GAU.........GCGAAGUUGCUGACUUGGCAACUUCCAAGCAAACAUUCCUCUUGUGCCAUUGUCGUUGAUCGGAAUUAUCCGUGA...........................................CGG.ACGAGAAGGC...GAG..C.GU..UUGCGAGUUU...............................................................GCAUCGG.GAGUCAGAAGACCUACCACGAAACGGACACUAUGU
Rhodopirellula_balti.2 BX294140.1/211185-211419 UCCGAGGUGACUGAUUUGGUUU..CUGCC........................GAGU........CAGUG......AACA..GGGAA.CUCC.G.G.UGA...............................AAUUCCGG.GACGGU.C.CG.GCCGCUGUGU..GC.CGCCAG......AGAUCUUCCAAGUGAAGUCUCAUUGUUUGCUUUUCUAUUCA....GCCAUUGCUCGUGUUUUCGCGUUUCAACGUGAACG......................................UGA.GUGAGAAGGC...CAU..G.AG..CAAACAAAGU................................................................GGUGGU.GAGUCAGAAGACCUACCUCGUACAAGACGUUUUGG
Caulobacter_crescent.1 AE005673.1/502948-503176 GUCUGUUGCCGUUGUCGUGGU...CUGCGGACGUU..................CGCGU....CCGGAGCU......AAGA..GGGAA.G.UC.G.G.UGAGGGCGUGAAACCCU.................GAAUCCGG.CGCUGCCC.CC.GCAACUGUGA..GC.GGC.........GAGCCGCUGUCCGUUUCGU..........................GUCACUGACGCGCCGAAGCUGGUUCGGGGAU..........................................GCG.UCGGGAAGGC.CAGGG..C.AG..GGGUGACGAC..................................................................CCGU.GAGCCAGGAGACCUGCCUCGACAGAUAACGUCCUC
Caulobacter.1 CP000927.1/2970294-2970494 AGUGCAGCUCUCGCGACAGGU...UCCUCGA......................AAGA........GGAUG......AAAA..GGGAA.CUCG.G.G.UGU...............................GAAACCCG.GGCUGCCC.CC.GCAACUGUAA..GC.GGCG........AGCCCGCGCGUCAUAA.............................ACCACUGGGAGCCUCCUUCGGGAGG................................................CCU.CUGGGAAGGC...GAC..G.CG..CACCGGCAUU...............................................................GACCCGC.GAGCCAGGAGACCUGCCCGUCGCGGUCGUCCUUCG
Caulobacter_crescent.2 AE005673.1/1924997-1925186 AGCUCUAGCUUCGCGUCAGGU...UCCUCGA......................AAGA........GGAUG......AAAA..GGGAA.C.GA.G.G.UUG...............................AAGACCUC.GGCUGCCC.CC.GCAACUGUAA..GC.GGC.........GAGCUUCGCGUCACAU.............................GCCACUGGGCCCAAAA.........................................................GGC.CUGGGAAGGC...GAC..G.CC..CAGAAGCAUU...............................................................GACCCGU.GAGCCAGGAGACCUGCCCGGCGCAGUCGUUCAUCG
Parvularcula_bermude.1 CP002156.1/2306524-2306337 GCCAUUCAGCGAAGAGAUGGUU..CCGUG........................AGAGA....UCACGGCG......AAGA..GGGAA.C.CC.G.G.UGG...............................CAAUCCGG.GGCUGUAC.CC.GCAACUGUGA..GC.CAG.........GAGCUGACAACCGAUAC............................ACCACUGGAG.GAAA...........................................................CU.CCGGGAAGGG...GGU..U.GG..AAGCGAUGAU..................................................................CGGU.GAGCCAGGAGACCUGCCAUCGCGUCGUUCGUCCGG
Bradyrhizobium.1 CP000494.1/6305642-6305856 ACCUACUGUGAUGGUGACGGU...GCCCC........................CUGAC....CGGGGCUC......AAAA..GGGAA.U.GC.G.G.UGCCGGACGUCCUUAACGGAUCGUUCG.......AAGGCCGC.AGCUGCCC.CC.GCAACUGUAA..GC.GG..........CGAAUCUCACGUCAGAU............................GCCACUGGGAAUUCUCG........................................................GUC.CUGGGAAGGC..GGCG..U.UG..AGGUGACGAC..................................................................CCGC.GAGCCAGGAGACCUGCCGUCAGCCGUGGUCACACG
B.japonicum.1 AF306632.1/382-181 GAUAAUCCAAGUCGUCGAGGUU..CUCCGGUUCCCA.................UUGAU....CCGGAGCU......AAGA..GGGAA.G.CC.G.G.UGC.........A.....................AAUGCCGG.CGCUGC.C.CC.GCAACUGUAA..GU.GGC.........GAGCCGCUGUCCAACGAU...........................GUCACUGAAGCCUGCACG.......................................................GCU.UCGGGAAGGC..CGGA..C.AG..CAGCGAUGAC..................................................................CAGC.AAGCCAGGAGACCGGCCCCGACAAUAUAUUGGUCC
Bradyrhizobium_japon.1 BA000040.2/5279689-5279475 CGUAGAUUGAUCGGUGACGGU...UCUCCGC......................ACGG........AGAUC......AAAA..GGGAA.C.GU.G.G.UGCGAGAUUGUCCCAAUGCCGGGAUUGUCCC...AACGCCAC.GGCUGCCC.CC.GCAACUGUAA..GC.GGU.........GAAUCUUUCGUCAUAU.............................GCCACUGGGAAUCUCG.........................................................GUC.CUGGGAAGGC...GAC..G.UA..AGGUAACGAC..................................................................CCGC.GAGCCAGGAGACCUGCCGUCAGCCGUGGUCACACG
Bradyrhizobium_japon.2 BA000040.2/3634102-3634304 AUCCUAGAUGCUCGCGACGGUU..UCCCCCG......................AGAG.......GGGAUG......AAAA..GGGAA.U.GC.G.G.UGCGGGGAUGUUUCCCC.................AAUGCCGC.GGCUGCCC.CC.GCAACUGUAA..GC.GG..........AUAAUCCUUCGUCAGAA............................GCCACUGGGUCCUCG..........................................................GUC.CCGGGAAGGC..GACG..A.AG..UGGUGACGAC..................................................................CCGC.GAGCCAGGAGACCUGCCGUCAGCCGUGGUCACACG
Bradyrhizobium.2 CU234118.1/5111792-5111599 CCGUAUCUAACAGAUGACGGU...UCUCCGA......................AAGG........AGAGA......UUUA..GGGAA.C.AC.G.G.UGCGGGUCUUCGACCC..................CAAGCCGC.GGCUGCCC.CC.GCAACUGUAA..UC.GGC.........GAGUGUGAGGCCAAGAC............................ACCACUGG...GCAA..............................................................CCGGGAAGGU...GGU..C.UC..ACGCAGCGAC..................................................................CCGA.GAGCCAGGAGACCUGCCGUCGACAUUGCUGUUGGC
Bradyrhizobium.3 CP000494.1/6303139-6303357 ACCUACUGUGAUGACGACGGU...GCCCC........................AUAAC....CGGGGCUC......AAAA..GGGAA.U.GC.G.G.CGCCGGACGCGUCUCGCGAGGGACAUGAUCG...AAGGGCGC.AGCUGUCC.CC.GCUCGUGCAG..GC.GG..........CAAAUGACGCGUCAUAG............................GCCACUCGGAAAUCCUG........................................................GUC.CCGGAACGAC..GUCA..U.GG..CGGCUAUGAC..................................................................ACGC.GAGCCAGGGCACCCGCCGUCAGCGGUGGUCACACG
Bradyrhizobium.4 CP000494.1/3290341-3290534 CGUAUCUAACAGGAUGACGGU...UCUCCGA......................AAGG........AGAGA......UUUA..GGGAA.C.AC.G.G.UGCGGGUUCUGAACCC..................AAGGCCGU.GGCUGCCC.CC.GCAACUGUAA..UC.GGC.........GAGUGUGAGGCCAAGAC............................ACCACUGG...GAAA..............................................................CCGGGAAGGU...GGU..U.UC..ACGCAGCGAC..................................................................CCGA.GAGCCAGGAGACCUGCCGUCGACAUUGCUGUUGGC
Bradyrhizobium_japon.3 BA000040.2/3617290-3617510 AAAUGGUGGCCCGGCGUUGGUU..CCUGUCC......................UAUG......ACAGGCG......AAGA..GGGAA.U.GC.G.A.UAGGGUCCGAAUCGGCAAGAUUUGGGUCCA....AAAU..GC.AGCCGCCC.CC.GCGACCGUGA..CC.GG..........AGAGAUGCCC....GAG............................GCCACUGAUCCCUGACG........................................................GGA.UCGGGAAGGC.....G..G.GG..AUCGAAGGGC.......................................................AAAACCCUGCUCCGC.AAGCCGGGAGACCUGCCAGCGCGGACGAUUUUGGA
Nitrobacter_winograd.1 CP000115.1/3122671-3122449 ACUAAAUAUAGUGGCCAAGGU...CUCUCGAGUCGC.................AACAC....CGAGAGCU......AAGA..GGGAA.G.CC.G.G.UGCGUCUCGGUCCGUGAUCCGGGC..........AAGGCCGG.CGCUGCCC.CC.GCAACUGUAA..GC.GGC.........GAGCCGAAGUCCACUUGAGU.........................GUCACUGGGGCUGCAAG........................................................GCU.CUGGGAAGAC..CGGA..C.CG..AUGCCUGGAC..................................................................CCGC.AAGUCAGUAGACCUGCCGUGGCAAAAAAAGAAUGU
Nitrobacter_hamburge.1 CP000319.1/4110955-4110750 CUUGUUUGGGAGAUCAUCGGUG..CCUCCCG......................CGGG........AGGUG......AAAC..GGGAA.U.GC.G.G.UGCGGGGAUACUGCCCCC................AAUACCGC.GGCUGCCC.CC.GCAACUGUAA..GC.GG..........CCAUCCGUAUCCAUUCG............................GCCACUGACCAUGCCAUGCA.....................................................UGU.GCGGGAAGGC...GGA..U.CC..GGAUAACGG...................................................................CCGC.GAGCCAGGAGACCGGCCGGUGACGCAUUCUUAGGC
Nitrobacter_hamburge.2 CP000319.1/4032968-4032764 CCAUAGGUUGGUUGUCGAGGUU..CUCCGGGUAUU..................CAUGC....UUGGAGCU......AAGA..GGGAA.G.CC.G.G.UGCGCUCUUGAGC.....................AAGACCGG.CGCUGCCC.CC.GCAACUGUAA..GC.GGU.........GAGCCGUGGUCCAUCAU............................GCCACUGGGU.GUUG...........................................................UC.CCGGGAAGGC..CGGA..C.CA..AAGCUGAGAC..................................................................CCGC.GAGCCAGGAGACCUGCCCCGGCAACAUAGUCGUCC
Nitrobacter_winograd.2 CP000115.1/2411796-2412010 CCCAAACAGAUCGGCGACGGU...UCUCCCU......................UGGG........AGAUC......AAAA..GGGAA.C.GU.G.G.UGCGGGAUCAUCCUAACACCGGGAUCAUUCC...AACGCCAC.GGCUGCCC.CC.GCAACUGUAA..GC.GG..........CGAAUCUGCGUCACAC.............................GCCACUGGGACAUCUCG........................................................GCC.CCGGGAAGGC...GAC..G.UC..AGGUAACGAC..................................................................CCGC.GAGCCAGGAGACCUGCCGUCAACCCGUGGUCACAC
Nitrobacter_hamburge.3 CP000319.1/2878648-2878845 UUCUAAAUGACCGGCGACGGU...UCUCCCU......................CGGG........AGAUC......AAAA..GGGAA.C.GU.G.G.UGCGGGAUCAUCCU....................AACGCCAC.GGCUGCCC.CC.GCAACUGUAA..GC.GG..........CGAAUCUGCGUCACAG.............................GCCACUGGGACAUCUCG........................................................GCC.CCGGGAAGGC...GAC..G.CC..AGGUAACGAC..................................................................CCGC.GAGCCAGGAGACCUGCCGUCAACCGUGGUCACACG
Nitrobacter.1 AAMY01000005.1/65948-65727 ACUAGAUAUGGUAGCCACGGU...CUCUCGAGUCGU.................CGUAC....CGAGAGCU......AAGA..GGGAA.G.CU.G.G.UGCGCCUCGGUCCAUGAUCCGGGC..........AAGGCCAG.CGCUGCCC.CC.GCAACUGUAA..GC.GG..........CGAGCCGAGUCCAAUUGAGU.........................GUCACUGGAACCGCAGG........................................................GUU.CCGGGAAGGC..CGGA..C.GG..ACGCUACGAC..................................................................CCGC.AAGUCAGGAGAUCUGCCGUGGCGGAAAGAACGUCC
Nitrobacter.2 AAMY01000011.1/25797-25600 UCCAAACAGAUCGGCGACGGU...UCUCCUU......................CGGG........AGAUC......AAAA..GGGAA.C.GU.G.G.UGCGGAAUCAUCCC....................AACGCCAC.GGCUGCCC.CC.GCAACUGUAA..GC.GG..........UGAAUCUGCGUCAUAC.............................GCCACUGGGAUAUCUCG........................................................GCC.CCGGGAAGGC...GAC..G.CC..AGGUAACGAC..................................................................CCGC.GAGCCAGGAGACCUGCCGUCAAACCGUGGUCACAC
Nitrobacter_hamburge.4 CP000319.1/4033871-4034093 ACUAGAUAUGGUGGUCACGGU...CUCUCGAGUCGC.................AAAAU....CGAGAGCU......AAGA..GGGAA.G.CC.G.G.UGCGCCCGAGUCUUAAUGGCGGGC..........AAUGCCGG.CGCUGCCC.CC.GCAACUGUAA..GC.GGC.........GAGCUGAAGUCCAUUAUUGU.........................GUCACUGGGACCGCAAG........................................................GCC.CUGGGAAGAC..CGGA..C.CG..ACGCCUAGAC..................................................................CCGC.AAGCCAGUAGAUCUGCCGCGACAACAAAAACGUCC
Nitrobacter_winograd.3 CP000115.1/3123579-3123785 CAUAGGAUGGGGGGUCGAGGUU..CUCCGGGACGAUU................CACGC....CCGGAGCU......AAGA..GGGAA.G.CC.G.G.UGUGUCUUCGGAU.....................AAAGCCGG.CGCUGCCC.CC.GCAACUGUAA..GC.GGU.........GAGCCGUGGUCCAUCAU............................GCCACUGGGU.GUUG...........................................................UC.CCGGGAAGGC..CGGA..C.CA..AAGCUGAGAC..................................................................CCGC.GAGCCAGGAGACCUGCCCCGGCAACAUAGUCGUCC
Rhodopseudomonas_pal.1 CP000250.1/3635632-3635843 AAACAUCGCGCUGCCGACGGU...UCCUGUC......................UGCGG....ACGGGACG......AAGA..GGGAA.UAUC.G.G.AAGUCAUCAUCCAGACGCGGAUGAUGGC......GGUGCCGA.AGCUGCUC.CC.GCAACUGUGA..AC.GG..........CGAGCCAUCGCAACAC.............................GCCACUGGGC.AGAC...........................................................GC.CUGGGAAGGC...UGC..G.UU..GGCCGUGAC...................................................................CCGU.GAGCCAGGAGACCUGCCGUCGCCUGCUGAUUGACG
Rhodopseudomonas_pal.2 CP000301.1/3897402-3897187 UGCGAUAGUUAACAUGAUGGUG..CCUCAAUCUCGAGUCUGCGUGAGUGGAUGCGAUC....UUGAGGAU......AAUA..GGGAA.C.AC.G.G.UGC...............................AAAACCGU.GACUGCCC.CC.GCAACUGUAA..GC.GG..........UUAGCCUGUCGUCCGAU............................ACCACUGGGAAUUUCGU........................................................UUC.CUGGGAAGGU..GACG..A.UA..GGUCAGCGAG..................................................................CCGC.GAGCCAGGAAACCUGCCAUCGCACGAUCAAUUUCG
Rhodopseudomonas_pal.3 CP000283.1/3256310-3256518 GAAGUCGCUUCAGCCUACGGUG..CCUCUCG......................UCGG......AGAGGUG......AAACU.GGGAA.U.GC.G.G.UGCGGCGAGAGAUCGCC.................AAUUCCGC.AGCUGCCC.CC.GCAACUGUGA..GC.GGAA........UAGGUCCGGAUCAAACU............................GCCACUGAGCUUCGAAGUGA.....................................................UGC.UUGGGAAGGC...GAU..C.CG..GACAAUCU....................................................................CCGC.GAGCCAGGAGACCGGCCGAAGGCGUUGUUCAACUC
Rhodopseudomonas_pal.4 CP000283.1/714109-714317 CUUCUAUCGGCAUGUUCAGGUG..UGCCGGA......................GUCUU....CCGGCA...........CA.GGGAA.G.CC.G.G.UCCGGGCGCCUUUGGCGGCGCCU...........CAAGCCGG.CGCUGCGC.CC.GCAACUGUAG..GC.GGC.........GAGCGAUCCUUCAUCAU............................GCCACUGGGCCCGUCG.........................................................GGU.UCGGGAAGGC...GGA..G.GA..UUGCGACGAC..................................................................CCGC.AAGUCAGGAGACCGGCCUGAGCCACGUCAUCUUCC
Rhodopseudomonas_pal.5 CP000301.1/4173480-4173288 GCUAGCGUUGCGAACGAUGGU...CCUUC........................CACGU....GGAAGGUG......AAAA..GGGAA.G.CC.G.G.UGCGAGCGAUUUC.....................AAACCCGG.CGCUGCCC.CC.GCAACUGUGA..GC.GA..........CGAGCCCGCGCCGAG..............................GCCACUGGGA..UGU...........................................................UC.CUGGGAAGGC...GGC..G.AG..GGGCUUUGAC..................................................................CCGC.GAGCCAGGAGACCUGCCAUCGUGAAGAGUGCUUUG
Rhodopseudomonas_pal.6 CP000283.1/4855579-4855783 CAUCUAGAUGAUUGUGACGGU...UCCCCUU......................CCGG........GGAUC......AAAA..GGGAA.U.GC.G.G.UGCGGACCUCUUCGGAGGACC.............AAUGCCGC.AGCUGUUC.CC.GCAACUGUAA..GC.GGU.........UCGACUUUCGUCGGAAU............................GCCACUGGGAAACUCG.........................................................GUC.CUGGGAAGGC...GAC..G.AA..AGCUAACAC...................................................................CCGC.GAGCCAGGAGACCUGCCGUCAUUCGUGGUCACACG
Rhodopseudomonas_pal.7 CP000283.1/2593935-2594143 CUGUUGUCGCGCAUCUUCGGUG..CCCUUCG......................UCGG......AAGGGUG......AAAC..GGGAA.U.GC.G.G.UGAGGCGAGUGAUCGCC.................CAAUCCGC.GGCUGCCC.CC.GCAACUGUAA..GC.GGA.........UUGUCUUCGGUCACAUGC...........................GCCACUGAGUUCGGCACCAGC....................................................CGC.UCGGGAAGGC...GAU..C.AG..GACAACAU....................................................................CCGC.AAGCCAGGAGACCGGCCGAAGACCGUAGCAACGCC
Rhodopseudomonas_pal.8 CP000283.1/785607-785805 GAUACGGUGAACAUCGACGGU...UCCCG........................CAAG........GGAUC......AAUA..GGGAA.U.GC.G.G.UGAGGAUUCUCGCGAAUCC...............AAUUCCGC.GGCUGCCC.CC.GCAACUGUAA..GC.GGC.........GAGCCUUUCGCCAAGC.............................GCCACUGGGCUUCGA...........................................................GC.CUGGGAAGGC...GGC..G.AA..AGGCAGCGAC..................................................................CCGC.GAGCCAGGAGACCUGCCGUCGUCGUGGUCACACGC
Rhodopseudomonas_pal.9 CP000283.1/2591234-2591019 CAAACAUCACGCGCCGAUGGUG..UCCCGUC......................UUUGG....ACGGGACG......AAAA..GGGAA.UGCC.G.G.AAGUCGCUGCCCGCAUUGAUGCGAGCAAGAC...CGAGCCGG.AGCUGCCC.CC.GCAACUGUAA..AC.GG..........CGAGCCGACGCAACAC.............................GCCACUGGAU.GUUU...........................................................CU.CCGGGAAGGC...UGC..G.CC..UGCGACGAC...................................................................CCGU.GAGCCAGGAGACCUGCCAUCGCCUGCUGUGUUGAC
Rhodopseudomonas_pal.10 CP000250.1/5294881-5295084 CUUUUAGUUGUAGGCGACGGU...UCCUCUC......................CGGA........GGAUC......AAAA..GGGAA.U.GC.G.G.UGCGGGUGCCUUCGGAAACCC.............AACUCCGC.AGCUGUUC.CC.GCAACUGUAA..GC.GGU.........UCGACUUUCGUCGGAAU............................GCCACUGGGAAACUCG.........................................................GUC.CUGGGAAGGC...GAC..G.GA..AGGUAACC....................................................................CCGC.GAGCCAGGAGACCUGCCGUCAUCCGUGGUCACACG
Rhodopseudomonas_pal.11 BX572600.1/273933-274129 CAUAGUGAUCGCCGUCGAGGUU..CUUCGGGCACGA.................UCGUC....CCGAAGCU......AAGA..GGGAA.G.CC.G.G.UGC...............................AAGGCCGG.CGCUGCCC.CC.GCAACUGUUA..GC.GGU.........GAGCCGACGUUCAGCAAA...........................GCCACUGGGA.GCGA...........................................................UC.CCGGGAAGGU..CGAA..C.AA..AGGCGAUGAC..................................................................CCGC.GAGCCAGGAGACCUGCCUCGUCGAACGAAACGUCC
Rhodopseudomonas_pal.12 BX572595.1/86162-86360 GCUAGCGUGCCAAGCGAUGGU...CCUUCCG......................UCAG......GAAGGUG......AAAA..GGGAA.G.CC.G.G.UGGGAGGCGCGGUGCGUCUC..............GAUCCCGG.AGCUGCCC.CC.GCAACUGUAA..GC.GA..........CGAGCCAUUGCCGAG..............................GCCACUGGGA....A..........................................................UUC.CUGGGAAGGC...GGC..G.AA..UGGCGGCGAC..................................................................UCGC.GAGCCAGGAGACCUGCCAUCGCGUAUUGUGCUUUG
Rhodopseudomonas_pal.13 CP000463.1/2468338-2468530 GCUAGCGUCGCCACCGAUGGU...CCUUCCG......................UUUG......GAAGGUG......AAAA..GGGAA.G.CC.G.G.UGCGAGUUCGCUC.....................CAUUCCGG.CGCUGCCC.CC.GCAACUGUAA..GC.GA..........CGAGCCAUCGCCGAG..............................ACCACUGGG..GCAA............................................................C.CUGGGAAGGC...GGC..G.AG.AGGGCGGCGAC..................................................................UCGC.GAGCCAGGAGACCUGCCAUCGCGGACUGUGCUUUG
Rhodopseudomonas_pal.14 CP000301.1/3909916-3909716 UACAAUAUAUAGUGUUACGGUC..UCCACAUGUUAC.................AUCAU....GUGGGGCU......AAGA..GGGAA.G.CC.G.G.UGU...............................GAAUCCGG.AGCUGCCC.CC.GCAACUGUCA..GC.GGC.........GAGCCGCCGUCCAGCGAU...........................AUCACUGAUGCCGCAAG........................................................GUG.UUGGGAAGAU..UGGA..C.GG..AAGCUGUGAC..................................................................CCGU.GAGCCAGGAGACCUGCCGUAGCAACGUGAAACGUC
Rhodopseudomonas_pal.15 CP000250.1/820695-820904 CUCCUAUCGAACCGUUCAGGUG..UGCCGGGA.....................GUCUC....CCGGCA...........CA.GGGAA.G.CC.G.G.UCCGGGCGCCUCAGGCGGUGCCC...........CAAGCCGG.CGCUGCGC.CC.GCAACUGUAG..GC.GGC.........GAGCGAUCCUUCAUCAU............................GCCACUGCGCCGAUCG.........................................................GGC.GCGGGAAGGC...GAG..G.GA..UUGCGACGAC..................................................................CCGC.GAGCCAGGAGACCGGCCUGAGCCACGUCAUCUUCC
Rhodopseudomonas_pal.16 CP000250.1/112481-112283 AGUACGGUCGCGCCCGACGGU...UCCCG........................CAAG........GGAUC......AAUA..GGGAA.U.GC.G.G.UGAGGGUCGCGCGCGAUCC...............GAUUCCGC.GGCUGCCC.CC.GCAACUGUGA..GC.GGC.........GAGCCUUUCGCCACAC.............................GCCACUGGGCCUCGU...........................................................GC.CUGGGAAGGC...GGC..G.AA..AGGCACGGAC..................................................................CCGC.GAGCCAGGAGACCUGCCGUCGUUCGUGGUCACACG
Rhodopseudomonas_pal.17 CP000283.1/3260113-3259915 UUAACCGGCCGCAGUACCGGUG..CCUCUCG......................AAGG......AGGGGUG......AAAC..GGGAA.U.GC.G.G.UGCGGGACGCUUGUCCC.................AAUGCCGC.AGCUGCCC.UC.GCAACUGUGG..GC.GG..........AUCGGAGUGUCCUUGAC............................GCCACUGGCC..AAU...........................................................GG.CCGGGAAGGC...GGA..C.GC..UCCAAAGAU...................................................................CCGC.GAGCCAGGAGACCGGCCGGUACCUCUGAAAGAACU
Rhodopseudomonas_pal.18 CP000463.1/4804452-4804231 GUUGGUGAGCACUGCCGAGGUU..CCCUGCUGCAGGCG...............UUUCA....GCAGGGCU......AAGAC.GGGAA.G.CC.G.A.UGGCGCUCGCGUUGAGCG................GAAUUCGG.CGCUGCCC.CC.GCAACUGUGA..GC.GGC.........GAGCGGCGGUUCGAUGGGU..........................GUCACUGGCGUUUACGAA.......................................................GCG.CUGGGAAGGC.UAGAA..C.CG..UCGCGACGAC..................................................................CCGU.GAGCCAGGAGACCUGCCUUUGGCGUGAUGACGUUC
Rhodopseudomonas_pal.19 BX572599.1/259196-259407 UGUGGUGCCGCUCGCUUCGGUG..CCCUUCG......................UUCG......AAGGGUG......AAAC..GGGAA.U.GC.G.G.UGCGGCGAGCAAUCGCC.................AAGUCCGC.GGCUGCCC.CC.GCAACUGUAA..GC.GGA.........UCGUCUCCGGUCACUCC............................GCCACUGAGUUCGGCAUCCUAGAGC................................................CGC.UCGGGAAGGC...GAC..C.GG..GACAAUGU....................................................................CCGC.GAGCCAGGAGACCGGCCGAAGUCCGCAACCAAGCC
Rhodopseudomonas_pal.20 CP000250.1/3754381-3754174 UCUGUUUGCCAUGCCUUCGGUG..CCUCUCG......................AAAG......AGAGGUG......AAACA.GGGAA.U.GC.G.G.UGCGGCGAGCUUUCGCC.................AAUUCCGC.GGCUGCCC.CC.GCAACUGUAG..GC.GGA.........UCGUCCGCGAUCAAGCU............................GCCACUGAGCGAUCGUUUUG.....................................................CGC.UCGGGAAGGC...GAU..C.CG..GACCAUAU....................................................................CCGC.GAGCCAGGAGACCGGCCGCAGGCAAUCGUCCACUU
Rhodopseudomonas_pal.21 BX572599.1/247113-247314 UUAACCCGAGGUUGUACCGGUG..CCUCUCG......................CCGA.....GAGAGGUG......AAAC..GGGAA.U.GC.G.G.UGCGGGGCGAUGCCCC..................AAUGCCGC.AGCUGCCC.UC.GCAACUGUGG..GC.GG..........AUCGGAGCGUCCUCGCAU...........................GCCACUGACCAGAUC...........................................................GG.UCGGGAAGGC...GGA..C.GC..GCCGGAUAU...................................................................CCGC.GAGCCAGGAGACCGGCCGGUACAAGGUGUGCAACU
Rhodopseudomonas_pal.22 CP000463.1/3487850-3487645 UUUCGUUCGGUCAUCUUCGGUG..CCCUUGU......................UCGG......AAGGGUG......AAAC..GGGAA.U.GC.A.G.UGCGGCGAGCAAUCGCC.................AAAGCUGC.GGCUGCCC.CC.GCAACUGUAA..GC.GGA.........UUGUCCGCGAUCACUAA............................GUCACUGAGGCGAGUUUCG......................................................GCC.UUGGGAAGAC...GAU..C.GG..GACCGUAU....................................................................CCGU.GAGCCAGGAGACCGGCCGAGGAUUUGUCGCAAUGC
Rhodopseudomonas_pal.23 CP000463.1/575538-575326 GACCUAGAUGGCCGCGACGGU...UCUUCGC......................AAGA........AGAUC......AAAA..GGGAA.C.GC.G.G.UGCGGGGCCUCCCACUUGGAAUGGCCCC......UAUGCCGC.GGCUGCCC.CC.GCAACUGUAA..GC.GG..........UUAGUCUUUCGUCUGAU............................GCCACUGGGUGCUUCG.........................................................GUC.CUGGGAAGGC..GACG..G.AA..GGUCAACGAC..................................................................CCGC.GAGCCAGGAGACCUGCCGUCGAUCGUGGUCACACG
Rhodopseudomonas_pal.24 CP000463.1/3532969-3532758 UCAUAAGUUAGCCAUCGUGGUU..CUGCGGGCAAGU.................CGUGC....CCGGAGCU......AAGA..GGGAA.G.CC.G.G.UGCGGCGCAAGCC.....................AAGGCCGG.AGCUGCCC.CC.GCAACUGUAA..GC.GGC.........GAGCCGCUGUCCAACAAU...........................GUCACUGGGACCGAUGAG.......................................................GUU.UCGGGAAGGC..CGGA..C.AG..CAGCGUUGAC..................................................................CCGC.GAGCCAGGAGACCUGCCACGAUGAAAUUCAACGUC
Rhodopseudomonas_pal.25 BX572596.1/50556-50756 UCUGGUUUUGACGUCUUCGGUG..CCUCGCG......................UGCG........AGGUG......AAACU.GGGAA.U.AC.G.G.UGCGGUGUUUUUCACC..................UAAUCCGU.AGCUGCCC.CC.GCAACUGUAG..GC.GGA.........UCUGUCCGGAUCAUGUA............................GCCACUGACGUCCUCG.........................................................GCG.UCGGGAAGGC...GGU..C.CA..GGCGAUAU....................................................................CCGU.GAGCCAGGAGACCGGCCGAAGACGGGAAGCAUCUA
Rhodopseudomonas_pal.26 CP000463.1/2461809-2461608 ACAUACUCUGGUGCCGAUGGU...UCCCAAA......................AUAU.......GGGAUG......AAAA..GGGAA.U.CC.G.G.AGCGUUGCCCGAGAUGGGCCGC............GACACCGG.AGCUGCCC.CC.GCAACUGUGA..CC.GG..........AGAGCCGCCACCAAAU.............................GCCACUGGAU..UUC..........................................................GAU.CCGGGAAGGC...GGU..G.CC..GGCUGUGAC...................................................................CCGC.GAGCCAGGAGACCUGCCAUCGCCUGUGACUGACGC
Rhodopseudomonas_pal.27 CP000301.1/3914520-3914312 GCUACAUGUAGAUGUCACGGU...CCCUCGAAUCGC.................AAGAU....CGGGGGCU......AAGA..GGGAA.G.CC.G.G.UGCGGCGCGAGCC.....................AAAGCCGG.AGCUGCCC.CC.GCAACUGUAA..GC.GGU.........GAGCCGACGUCCAGCCUUU..........................GUCACUGAGGCCGAAA.........................................................GCC.UCGGGAAGAC...GGA..C.CG..AAGCGACGAU..................................................................CCGC.GAGCCAGGAGACCUGCCGCGACAACAGAACGUCUU
Rhodopseudomonas_pal.28 CP000463.1/3487953-3488157 ACUAAAUGUUGCUGUCACGGU...CUCUCGAAUCGC.................UUGAU....CGAGAGCU......AAGA..GGGAA.U.CC.G.G.UGUGGCGAAAGCC.....................GAAGCCGG.AGCUGCCC.CC.GCAACUGUAA..GC.GGC.........GAGCCGACGUCACCGAGU...........................GCCACUGGGA.GCAA...........................................................UC.CCGGGAAGGC...CGA..C.GA..AGGCAUUGAC..................................................................CCGC.GAGCCAGGAGACCUGCCGCGACAACGACUACGUCC
Rhodopseudomonas_pal.29 BX572594.1/100625-100429 AAUACCGUGACCAGCGACGGU...UCCCG........................AAAG........GGAUC......AAUA..GGGAA.C.GC.G.G.UGCGGGCUUUAGGGCUC.................UAUUCCGC.GGCUGCCC.CC.GCAACUGUAA..GC.GGC.........GAGCCAUUCGCCACAC.............................GCCACUGGGCUUUCG...........................................................UC.CUGGGAAGGC...GGU..G.AA..CGGCAACGAC..................................................................CCGC.GAGCCAGGAGACCUGCCGUCAGUCGUGGUCACACG
Rhodopseudomonas_pal.30 CP000283.1/2565817-2565609 AGAAUACUCGCCUGUCACGGU...CUUUCGAGUCGUAUGUGCACG........CGAUC....CGAGAGCU......AAGA..GGGAA.G.CC.G.G.UGC...............................AAAGCCGG.CGCUGCCC.CC.GCAACUGUAA..GC.GGC.........GAGCUGACGUCCGAUAGUC..........................GCCACUGGGCCCAUUG.........................................................GAC.CCGGGAAGGC..AGGA..C.UG..ACGCUAAGAC..................................................................CCGC.GAGCCAGGAGACCUACCGCGACAGUCGCAAUCGUC
Rhodopseudomonas_pal.31 CP000463.1/3491563-3491365 UUAAAGCGCUGCGUCACCGGUG..CCUCUCG......................CAAG......AGGGGUG......AAAC..GGGAA.U.GC.G.G.UGCGGGACGAUGUCCC..................CAAGCCGC.AGCUGCCC.UC.GCAACUGUAA..GC.GG..........AUCACGACGUCCUUGAU............................GCCACUGGCC.GAUC...........................................................GG.CCGGGAAGGC...GGA..C.GA..GCGAUACAU...................................................................CCGC.GAGCCAGGAGACCGGCCGGUGACGUUGAGCCAACU
Rhodopseudomonas_pal.32 CP000250.1/3754538-3754747 UCUUGUCGGAUCGUCUACGGUG..CCUCU........................CGCGA....GAGAGGUG......AAACA.GGGAA.U.GC.G.G.UACGGCGCGAAAGCGCC.................AAAGCCGC.GGCUGCCC.CC.GCAACUGUAA..GC.GGA.........UCGUCGCCGAUCACAUGC...........................GCCACUGAGUCCGCCAAGACG....................................................GCC.UCGGGAAGGC...GAU..C.GG..GACAACAU....................................................................CCGC.GAGCCAGGAGACCGGCCGUAGAUUCGUGCAAUGCC
Rhodopseudomonas_pal.33 BX572595.1/100553-100338 UUUGAUCGCGCCCGUUCAGGUG..UGCCGGGA.....................AUCGU....CCGGCA...........CA.GGGAA.G.CC.G.G.UGCGGGCCCAAGCUUAUGGCCGCAAACCC.....AAAUCCGG.CGCUGCGC.CC.GCAACUGUGA..GC.GGU.........GAGCGAUCCUUCAAUCG............................GCCACUGGGCAGCACU.........................................................UGC.CCGGGAAGGC...GAA..G.GA..UUGCGACGAC..................................................................CCGU.GAGCCAGGAGACCGGCCUGAGUACGUCAUCUUCCA
Rhodopseudomonas_pal.34 CP000301.1/4737279-4737476 UUAAACGCCGCGGUCGUCGGUG..CCUCUCG......................CAAG......GGAGGUG......AAAC..GGGAA.U.GC.G.G.UGCGGGACGAUGUCCC..................AAGGCCGC.GGCUGCCC.UC.GCAACUGUAU..GC.GG..........AUCGAGACGUCCAACAU............................GCCACUGGCC.GAUC...........................................................GG.CUGGGAAGGC...GGA..C.GA..GGAGAUAU....................................................................CCGC.GAGCCAGGAGACCGGCCGGCGACGUCGAUCUUACG
Rhodopseudomonas_pal.35 CP000283.1/3256000-3255793 GUGCGCGCAUCGACCUUCGGUG..CCCUUCUU.....................GGAA........GGGUG......AAAC..GGGAA.U.GC.G.G.UGCGGCGAGCAAUCGCC.................UAGUCCGC.AGCUGCCC.CC.GCAACUGUAA..GC.GGA.........UCGUCUCCGGUCAAAUGC...........................GCCACUGAGUUCGGCUUCAGC....................................................CAC.UUGGGAAGGC...GAU..C.GG..GACAUUCU....................................................................CCGC.GAGCCAGGAGACCGGCCGAGGGUCGUUUUGGAUGC
Rhodopseudomonas_pal.36 CP000250.1/834289-834069 GCUAGCGUGGCCGGCGAUGGU...CCUUC........................CGCGA....GGAAGGUG......AAAA..GGGAA.U.CC.G.G.UGCGCGAACGCUCUGCAUUGAGCGAUCUC.....AAUCCCGG.UGCUGCCC.CC.GCAACUGUAA..GC.GA..........CGAGCCCGCGCCUCG..............................GCCACUGGGAUUCCUCUAAGGA...................................................CUC.CUGGGAAGGC...GGC..G.AC..AAGGGCAGCG................................................................ACUCGC.GAGCCAGGAGACCUGCCAUCGCGAAUUGUGCUUUG
Rhodopseudomonas_pal.37 CP000301.1/2063662-2063445 AUGCAGUCCAUAGCCGACGGUG..CCCUGUC......................CUCGG....ACAGGGCG......AAGA..GGGAA.UACC.G.G..GCGCCGGGUUAAGGGAUGGUCCCUUAGGCCGGUGAAGCCGG.AGCUGCCC.CC.GCAACUGUGA..GC.GG..........ACAGCCUGCACCGAAA.............................ACCACUGGGU..CUC..........................................................GAC.CUGGGAAGGU...GGU..G.CC..GGCCAUGAC...................................................................CCGC.GAGCCAGGAAACCUGCCGUCGCCUGCGAUUUCGCC
Rhodopseudomonas_pal.38 CP000283.1/727646-727425 GAUAGCGUGGCCGGCGAUGGU...CCUUCCG......................CCAG......GAAGGUG......AAAA..GGGAA.U.CC.G.G.UGCAAGUGAACUCUGUUCGAGUGAUCUC......AAUCCCGG.UGCUGCCC.CC.GCAACUGUAA..GC.GA..........CGAGCCCGCGCCUCG..............................GCCACUGGGAUUUCCUGCUUGGAA.................................................AUU.CUGGGAAGGC...GGC..G.ACAAGGGCGAUGAC..................................................................UCGC.GAGCCAGGAGACCUGCCAUCAUGAAUGGUGCUUUG
Rhodopseudomonas_pal.39 BX572608.1/190529-190732 ACUUCUAAUGGCGGUGACGGU...UCCCG........................AGAG........GGAUG......AAAA..GGGAA.U.AC.G.G.UGCGGACGCAGACACUUUCGCGUUC.........UAGGCCGU.AGCUGUUC.CC.GCAACUGUAA..GC.GGA.........UCGUCUUUCGUCGGAU.............................GCCACUGGGAACCUCG.........................................................GUC.CUGGGAAGGC...GAC..G.GA..AGAUCAA.....................................................................CCGC.GAGCCAGGAGACCUGCCGUCAUUCGUGGUCACACG
Rhodopseudomonas_pal.40 BX572599.1/256535-256331 CAAACAUCGCGCGCCGACGGUG..UCCUGUC......................UUCGG....ACAGGACG......AAGA..GGGAA.UAUC.G.G.AAGAUCGCUGCCUGCAGCGGU.............CGCGCCGA.AGCUGCCC.CC.GCAACUGUAA..AC.GG..........UGAGCCGACGCAAUAC.............................GCCACUGGAU..CAU...........................................................AU.CCGGGAAGGC...CGC..G.UC..GGCGACGAC...................................................................CCGU.GAGCCAGGAGACCUGCCGUCGCCUGCUAUGUUGAC
Rhodopseudomonas_pal.41 CP000301.1/96643-96430 CUCCUAGAUGAUCGCGACGGU...UCCCCUC......................UGGG........GGAUC......AAAA..GGGAA.U.GC.G.G.UGCGGGACGGCUCUCGGUUGGAGCAAGCCC....AAUGCCGC.GGCUGCCC.CC.GCAACUGUAA..GC.GGU.........UAGUCUUUCGUCUGAU.............................GCCACUGGGAAACUCG.........................................................GUC.CUGGGAAGGC...GAC..G.AA..AGGUUCCGAC..................................................................CCGC.GAGCCAGGAGACCUGCCGUCAAUCGUGGUCACACG
Rhodopseudomonas_pal.42 CP000301.1/4742649-4742447 UCUUUUCAGGCCGUCUUCGGUG..CCUCU........................GGUAA....CAGAGGUG......AAACU.GGGAA.U.GC.G.G.UGCGGCGAGAAAUCGCC.................AAUGCCGC.GGCUGCCC.CC.GCAACUGUAG..GC.GGA.........CUGUGCCCGAUCGAUAA............................GCCACUGAUGCCGUG...........................................................CA.UCGGGAAGGC...GAU..C.GG..GGACCAUGU...................................................................CCGU.GAGCCAGGAGACCGGCCGAAGACGCUGGUCCAACU
Rhodopseudomonas_pal.43 CP000463.1/3539927-3539727 UACAAGAUAUGGCGUUACGGUC..CCCACAUGUCAC.................AUCAU....GUGGGGCU......AAGA..GGGAA.G.CC.G.G.UGU...............................GAAUCCGG.CGCUGCCC.CC.GCAACUGUCA..GC.GGC.........GAGCCGCCGUCCAGCAAU...........................AUCACUGACGCCGCGAG........................................................GUG.UUGGGAAGAU..UGGA..C.GG..AAGCUGUGAC..................................................................CCGU.GAGCCAGGAGACCUGCCGUAGCAAACGCGUAACGU
Brucella_suis_1330.1 AE014291.4/1309296-1309068 UCGCAAUUUUCAGGAGACGGU...UCCGCCA......................UUGC.....GGCGGAUG......AAAA..GGGAA.C.AC.G.G.UGAAGCCAUAGGGCU...................GAAACCGA.GACUGCCC.CC.GCAACUGUAA..CC.GG..........AGAGCUAUCCUCCACAGGCCGCGCAAGCGGCCAAA..........GCCACUGAAAGCAGCAAUAUGCUG.................................................CAA.UCGGGAAGGC..GGAG..G.CA..AAGCGAAGAC..................................................................CCGG.AAGUCAGGAGACCUGCCGUAUCCGGUCACCCAUGC
Brucella_abortus_bv.1 AE017224.1/478516-478748 CCGUAAUACCGUCAUGACGGU...UCCCCGACCGAG.................AGCGA....AGGGGAUU......AAUA..GGGAA.C.AC.G.G.UGAGGACGACCCAUCAAGGGGCC...........GAGACCGU.GGCUGCCC.CC.GCAACUGUAA..GC.GGA.........UUGCCGUUCAUCCUCGUGACGCCGAAAGCGUCAU...........GCCACUGUGC.CCAC..........................................................GGC.ACGGGAAGGC..AGAU..G.GA..CGGCGAUUAU..................................................................CCGC.AAGCCAGGAGACCUGCCGUCUUACGUAGUCCAUUG
Brucella_canis_ATCC_.1 CP000873.1/297626-297839 ACCAUAUCUUGUGUUCGAGGUU..CUUUCGAUUCGA.................CGAGU....CGGGAGCU......AAGAC.GGGAA.U.CC.G.G.UGCGCUUGCCCAUGGUGGGCGGGC..........AAUGCCGG.AGCUGCCC.CC.GCAACUGUAA..GC.GG..........CGAGCUUUGCGCCCCAU............................GCCACUGGC..GAAA............................................................G.CCGGGAAGGC...GGG..U.GG..AAGCGUUGAG..................................................................CCGU.GAGCCAGGAGACCUGCCUUGAGCGUGAACGUCCAC
Ochrobactrum_anthrop.1 CP000758.1/1918958-1919182 UCGCAAUUCUCAGGAAACGGU...UCCGCUG......................UUCA.....GGCGGAUG......AAAA..GGGAA.C.AC.G.G.UGAAGCCAUCCUGGUU..................GAUGCCGC.GACUGCCC.CC.GCAACUGUAA..CC.GG..........AGAGCUAUCCUCCACAGCCGUGCAAGCGGUAAAA...........GCCACUGAGAGCAGUCGAUG.....................................................CAC.UCGGGAAGGC..GGAG..G.GA..AAGCGACGAC..................................................................CCGG.AAGUCAGGAGACCUGCCGUAUCCGGUCACCCAUGC
Ochrobactrum_anthrop.2 CP000759.1/1328776-1328542 ACGUAAUAGUGUAACGACGGU...UCCCCGACCGAG.................AGCGA....AGGGGAUU......AAUA..GGGAA.C.AC.G.G.UGAGGACGACCCGAAAAGGGGCC...........AAGACCGU.GGCUGCCC.CC.GCAACUGUAA..GC.GGA.........UUGCCGUUCAUCCUCGUGACGUUGAAAGCGUCAU...........GCCACUGUGCCGGAGA.........................................................AGC.GCGGGAAGGC..AGAU..G.AA..CAGCAGAUAU..................................................................UCGU.GAGCCAGGAGACCUGCCGUUUAGUGUUGUCCAUUG
Ochrobactrum_anthrop.3 CP000759.1/250860-251074 ACUAUAUAUAGUGUUCUAGGUU..CUUUCGAUUCGU.................UGGGU....CGAAAGCU......AAGAC.GGGAA.U.CC.G.G.UGCGUUUCAUCCAUGACGGAUGCGGC........AAUGCCGG.AGCUGCCC.CC.GCAACUGUAA..GC.GG..........AGAGUUCUGUCCAUCAC............................GUCACUGGC...UUU..........................................................G.G.CUGGGAAGGC...GGA..C.AG..AAUGUUGAU...................................................................CCGU.GAGCCAGGAGACCUGCCUUGAACGAGUACGUCCAC
Methylobacterium_ext.1 CP000908.1/1328850-1328641 CGAAGUUGCUGCGGCCAAGGUU..CCCCCGGAUGC..................AUGUC....CGAGGGCU......AAGA..GGGAA.U.UC.G.G.UAAGCCCGUCCGGGC...................GAGGCCGA.AGCUGCCC.CC.GCAACUGUGA..GC.GGC.........GAGCCACCGUCGUCGAAG...........................GUCACUGGUGCCCUG...........................................................CA.CCGGGAAGGC.CGAGA..C.GG..GGGCGCUGAC..................................................................CCGU.GAGCCAGGAGACCUGCCUUGGCGCGACGAUGUCCC
Methylobacterium_ext.2 CP000908.1/1617572-1617372 CUAUGACCGCUCCGUGACGGUG..CCCCGGC......................AGCG........GGGUG......AAAA..GGGAA.U.GC.G.G.UGAGAGGUUUUCCAGAAGCCUC............GAUUCCGC.GGCUGCCC.CC.GCAACUGUAA..GC.GG..........CGAGUUCCUGCCACGA.............................GCCACCGGGU...............................................................GAU.CCGGGAAGGC...GGC..A.GG..CACGAUACCA.................................................................GCCGC.GAGCCAGGAGACCUGCCGUCCAGCGAAGUUUUGUU
Methylobacterium.1 CP000943.1/2696265-2696461 GCUACCUUCCGCCGCGACGGUG..CCUCGGC......................GACG........AGGUG......AAAA..GGGAA.C.GC.G.G.AGCGGGGCCAGCCCCG..................GAAGCCGC.GGCUGCCC.CC.GCAACUGUGA..GC.GG..........UGCGGGCCCGCCAUCG.............................GCCACUGGA..GCGA............................................................U.CCGGGAAGGC...GGC..G.GG..CACGGUCCAC................................................................CAUCGC.GAGCCAGGAGACCUGCCGUCACCCCUUCCUCUCGA
Methylobacterium_ext.3 CP000908.1/2947467-2947267 CGUAGCUUGACCGUUGACGGU...UCCCG........................CAAG........GGAUC......AAAA..GGGAA.C.GC.G.G.UGGAGGGCUUUCGAGCUC................GAUCCCGC.GGCUGCCC.CC.GCAACUGUGA..GC.GGA.........GAGUCCUCCAUCACCAC............................GUCACUGGGCAUGCCU.........................................................CGC.CUGGGAAGAC...GAU..G.GA..GGGCGACGAC..................................................................CCGC.CAGCCAGGAGACCUGCCGUCAGCCGUGGUCACACG
Methylobacterium.2 CP000943.1/944045-944239 CCUAGCCUAUCGCUCGACGGU...GCCCU........................CCGG........GGCCU......AACA..GGGAA.C.GC.G.G.UGAGGGCUCGCGCCC...................GAAUCCGC.GGCUGCCC.CC.GCAACUGUGA..GC.GGC.........GAGCCCUCCAUCACCAC............................GUCACUGGGG.UCAU...........................................................GC.CCGGGAAGAC...GAU..G.GG..GGGCGGCGAC..................................................................CCGC.GAGCCAGGAGACCUGCCGUCGACCGUGGUCACACG
Chelativorans.1 CP000390.1/3801882-3802094 UAUUCAAUGCAUGUCUGUGGUU..CUCCGGGGCGGUUUUG.............CCGUU....CCGGAGCU......AAGA..GGGAA.G.CC.G.G.UGCGCGAUGUUGC.....................AAAGCCGG.CGCUGCCC.CC.GCAACUGUAA..AC.GGC.........GAGCCGAAAUCCACCGGU...........................GUCACUGAGGUGAUAA.........................................................GCC.UUGGGAAGAC...GGA..U.UG..AAGCGAAGAC..................................................................CCGC.GAGCCAGGAGACCUGCCACGGCAAGAAGAAACGUC
Chelativorans.2 CP000390.1/2942047-2941844 CUAAAUAUAGCCCAUCACGGU...GCUGUCGAGUCGUUC..............GGGUC....GAGAGCUU......AAGA..GGGAA.G.CC.G.G.UGU...............................GAGGCCGG.CGCUGCCC.CC.GCAACUGUAA..GC.AGC.........GAGCUUGUGUCGCGUAUU...........................GCCACUGGUGCUCCUAGA.......................................................GCG.CUGGGAAGGC..CUGA..C.AG..AAGCGAUGAC..................................................................CUGC.AAGCCAGGAGACCUGCCGUGAUGAGCAUUGAACGU
Mesorhizobium_loti_M.1 BA000012.4/1149122-1149327 CCUAAAUCCGCUCCAGACGGU...CCCUUGCCCGC..................AACGG....CAGGGGCU......AAGA..GGGAA.U.GC.G.G.UGCGGGAUUUCGAUCUC.................AAAUCCGC.GGCUGUCC.CC.GCAACUGUAA..GC.GA..........AGAGCCAAGGCCGAAA.............................GCCACUGGGA..CGU...........................................................UC.CCGGGAAGGC...GGCACC.CA..AGGCGAUGAC..................................................................CCGC.GAGCCAGGAGACCUGCCGUCUGCGACAAAAGAAUC
M.loti.1 AL672113.1/43141-43341 UGAUUGUGCGCAUGUCGUGGUU..CUCCGCGCGGCACUG..............CCGUA....GCGGAGCU......AAGA..GGGAA.G.CC.G.G.UGC...............................GAUGCCGG.CGCUGCCC.CC.GCAACUGUUA..GC.GG..........CGAGCCAAGCCCAUUGGU...........................GUCACUGAGGCGAACG.........................................................GCC.UCGGGAAGAC...GGG..C.AG..AGGCUUUGAC..................................................................CCGC.GAGCCAGGAGACCUGCCACGACGAACAACGUCCAC
Mesorhizobium_loti_M.2 BA000012.4/1101095-1100897 UAUAGUCAUGCAGUCGUCGGU...UCCGU........................UUUG........GAGCC......AAGA..GGGAA.U.GC.G.G.UGCGGGCGAAAUUCUUGCCC..............AAUGCCGU.GGCUGCCC.CC.GCAACUGUGU..GC.GG...........UAGUCCUCUCCAUAU.............................GCCACUGAAGAUUCG..........................................................UCU.UCGGGAAGGU...GGG..G.AA..GGGCGCUGAU..................................................................CCGU.GAGCCAGGAGACCUGCCGACGACGGCAAAACUGAC
Mesorhizobium_loti_M.3 BA000012.4/6749128-6749334 CUACGGUGGGUGCGUGAUGGU...CCCCGCGCCGA..................AAGGC....AAGGGGUG......AAAA..GGGAA.C.AC.G.G.UGAGACCUCAAAAGGUC.................GAGACCGU.GGCUGCCC.CC.GCAACUGUAA..GC.GG..........AGAGCAAGAUCCGACAU............................GCCACUGGCCGGCAA...........................................................GG.CUGGGAAGGC..AGGA..U.UG..CGCUGAGAC...................................................................CCGC.GAGCCAGGAGACCUGCCAUCACUGAGUUGACCGGA
Mesorhizobium_loti_M.4 BA000012.4/4044596-4044395 UUAGAUCAUGUCAUCUCAGGUG..CCGCUUC......................GUGACGACGGGGCGGAG......AAUU..GGGAA.G.CC.G.G.UCA...............................AAGUCCGG.CGCUGCCC.CC.GCAACGGUGG..UG.GAGU........UCAAGUCGCAACGGGAG............................ACCACUGGGC.AAAA...........................................................GC.CUGGGAAGGU...GUC..G.CG..ACCGUCCGCA...........................................................AGGACACUCCA.GAGCCCGGAAACCAGCCCGAGAUUUUUGAACUCGA
Mesorhizobium_loti_M.5 BA000012.4/6170874-6170694 AGGUCGCCGCCACUGCCUGGUG..CCCGCCG......................CAAG.......CGGGAG......AAUC..GGGAA.C.AC.G.G.UUG...............................AACUCCGU.GGCGUG.C.CC.AACGCUGUAA..GG.GG..........GACCGCGCCGGUAAAU.............................GCCACUGUCG...............................................................AUG.ACGGGAAGGC...ACC..G.GA..CGCGGGUUGA..................................................................UCCC.GAGCCAGAAGACCGGCCUGGCAGGCAUCGUCAUCC
Parvibaculum_lavamen.1 CP000774.1/549380-549581 UACACUCCGCCCGCCUAUGGUG..CCCCGGCCG....................CAAAU....CCGGGGUU......AAAA..GGGAA.C.GC.C.C.GGAGCGCAUGCUCUUUC.................UUCGAGGC.GGCUGCCC.CC.GCAACUGUAA..GC.GGC.........GAGCUUUUUCCGAUUGU............................GCCACUGGAU................................................................GU.CCGGGAAGGC...AGG..G.AA..GGGCGAAGAC..................................................................CCGC.GAGCCAGGAAACCUGCCACAGGCUGUCGUCCGUCU
Parvibaculum_lavamen.2 CP000774.1/668593-668795 UAGCAUCCGCCCCGCAAUGGU...UCCGAAGGCGAA.................UAGCC....GGAGGAUG......AAAA..GGGAA.C.CC.G.G.UUA...............................AAUACCGG.GGCUGCCC.CC.GCAACUGUAA..GC.AGA.........GAGUUCUGCCCAACCAC............................GCCACUGGCGCUCCACCUCGG....................................................AGG.CCGGGAAGGC...UGG..G.AA..AGAACAGUGA.................................................................CCUGC.GAGCCAGGAGACCUGCCAUUGCCCGUCAACGCGAA
Agrobacterium_tumefa.1 AE007870.2/441359-441124 CUUAUGUGAGAAAGCGACGGU...UCCUACAGCCGAA................AGGCG....AAGGGAUU......AAUA..GGGAA.C.AU.G.G.UGCGGGCGAUCUUUUUCGUCC.............AAUGCCUU.GGCUGCCC.CC.GCAACUGUAA..GC.GGA.........UUGUUGUUCAUCCCAGUGACGCUUGAAGGCGUCAU..........GCCACUGUUUUUUUCGG........................................................AAU.GCGGGAAGGC..AGAU..G.AG..GGACGCAAAU..................................................................CCGU.GAGCCAGGAGACCUGCCGUCAAAAUGGAAACCAUC
Agrobacterium_tumefa.2 AE007870.2/921705-921914 ACAUUGGUUAGCCAUCGUGGUU..CUGCGGACG....................AAGGU....CCGGAGCU......AAGA..GGGAA.U.UC.G.G.UGAGGGCUUUAAUCACAGCCU.............GAAUCCGA.AGCUGCCC.CC.GCAACUGUAA..GC.GAC.........GAGCGAAAGUCCAUCAU............................GUCACUGAGG..CCG..........................................................GCC.UCGGGAAGAC...GGA..C.CA..AAGCUAUGAC..................................................................CCGC.AAGCCAGGAGACCUGCCGCGAUAGAUAACGUCCAC
A.vitis.1 U45329.1/408-194 CUAAAGUGGCAGCGUAUCGGU...UCUGCAAGUGUCAAA..............ACGCN....CGCGGAUG......AAAA..GGGAA.U.AC.G.G.UGAGGACGACCCAAGUAAGGGCC...........GAAACCGU.GGCUGCCC.CC.GCAACUGUGA..AC.GG..........CGAGCGAUGUCCAUCAU............................GCCAUUGGCC.CCAC...........................................................GG.CCGAUAAGGC...GGA..C.AA..AGCCCAGAC...................................................................CCGU.GAGCCAGGAGACCUGCCGAUAAGCAUGCGCGAAAG
Agrobacterium_tumefa.3 AE007869.2/70421-70645 ACUAUAUGUGGUGUUCAAGGUU..CUUCCGAUUCGCU................AGGGU....UGGGAGCU......AAGAC.GGGAA.U.UC.G.G.UGCGUAACGCCAUCACGGCGGAGC..........AAGGCCGA.AACUGCCC.CC.GCAACUGUGA..GC.GG..........CGAGCAUCGUUCCGAUUUGA.........................GCCACUGGAGCCAAAA.........................................................GCU.CCGGGAAGGC.UGGAA..U.AG..AUGUUGUGAC..................................................................CCGC.AAGUCAGGAGACCUGCCUUGAGCGCAAAUGUCCAC
Agrobacterium_tumefa.4 AE007869.2/1640673-1640490 CCAUAGCUUCUCCGGUCAGGUG..CCCGCC.......................CUUGC....GGCGGGAG......AAUC..GGGAA.U.CC.G.G.UGA...............................AAGACCGG.AACGUG.C.CC.AACGCUGUAA..GG.CG..........GAUGCUCUUUUUCUCAU............................GCCACUGAA..GCAA............................................................U.UCGGGAAGGC...GAA..A.GG..GGCGGAUGA...................................................................AGCU.UAGUCAGAAGACCGGCCUGGCAGGAUAGACCGAAC
Agrobacterium_tumefa.5 AE007869.2/877627-877855 GGAUAACAUGUCCGUGAUGGUU..CCUUCCG......................GGCGUUCC.GGAAGGUG......AAAA..GGGAA.C.AC.G.A.UAGGGACAAAUCC.....................UCAUUCGU.GGCUGCCC.CC.GCAACUGUGA..GC.GG..........AGAGCCUGAAACGAAAU............................GCCACUGGCAAGCCAUCUCGCCUCCAUCAAGGGGGAAGGCA................................AUG.CCGGGAAGGU...GUU..U.CA..GGUUUUGAC...................................................................CCGU.AAGCCAGGAGACCUGCCAUCACGGAAAUAUCCAUG
Agrobacterium_tumefa.6 AE007869.2/2810186-2809969 UAAGGGUAAGGGACUGACGGU...CUUUUCCCGGC..................AACGG....GAAAAGCU......AAGA..GGGAA.C.AC.G.G.UUCCGCCCCGAGAAAGGGU...............CAUUCCGU.GGCUGCCC.CC.GCAACUGUAA..GC.GG..........UAAGCCCGCACCGUAAA............................GCCACUGAACCUUUAUGAUC.....................................................GGU.UCGGGAAGGC...GGU..G.AC..AGGGUGUUGA...............................................................UAGCCGC.AAGCCAGGAGACCUGCCGUUUCAGGAAAAAGCGUC
Rhizobium_leguminosa.1 AM236080.1/4518994-4518768 ACCAUAUCUAGUGUUCGAGGUU..CCGUCGAUUCGUG................AGGAU....CGGCGGCU......AAGAC.GGAAA.U.UC.G.G.UGCGCGUCGCCAUCAUGGCGCGGC..........AAUGCCGG.AGCUGCCC.CC.GCAACUGUGA..GC.GG..........CGAGCAACUGUCCGAUUUCAG........................GUCACUGGAGCAUGAU.........................................................GCU.CCGGGAAGGCUGGGGC..A.AA..GUGCUUUGAC..................................................................CCGU.GAGCCAGGAGACCUGCCUCGAAUGAAACGUCCACG
Rhizobium_etli_CFN_4.1 CP000133.1/3940621-3940395 ACUAUAUCUAGUGUUCAAGGUU..CCUUCGAUUCGUC................AGGAU....CGCGGGCG......AAGAU.GGGAA.U.AC.G.G.UGCGUUUCGCCAUGACGGCGCAAC..........AAGGCCGG.AGCUGCCC.CC.GCAACUGUAA..GC.GG..........CGAGCAACUGUCCGAUUUCAG........................GUCACUGAGGCAUGAU.........................................................GCC.UCGGGAAGGCUGGGGC..A.GG..GUGCUUCGAC..................................................................CCGC.GAGCCAGGAGACCUGCCUUGAACUAGAUGUCCACG
Rhizobium_leguminosa.2 AM236080.1/2836182-2835994 GAAAUAGAUGCGCCGUCAGGUG..CCCGCCG......................GUAA.....GGCGGGAG......AAUC..GGGAA.U.CC.G.G.UGC...............................AAGACCGG.AACGUG.C.CC.AACGCUGUAA..GG.CC..........GACGUUUGCCGCUUCAUCAC.........................GCCACUGGC..UUUU..........................................................C.G.CCGGGAAGGC..UGCG..G.CA..GACGGAUGA...................................................................CGCC.CAGUCAGAAGACCGGCCUGGCAAGAUAGACCGAUC
Rhizobium_etli_CFN_4.2 CP000133.1/2475759-2475573 GAAAUAGAUACCUCGUCAGGUG..CCCGC........................UUUCA....CGCGGGAG......AAUC..GGGAA.U.CC.G.G.UGC...............................AAGACCGG.AACGUG.C.CC.AACGCUGUAA..GG.CC..........GACGCCCGCCGCUUCAUCAU.........................GCCACUGG..GUUUU..........................................................G...CCGGGAAGGC..UGCG..G.CA..GACGGAUGA...................................................................CGCC.AAGUCAGAAGACCGGCCUGGCAAGAUAGACCCAAC
Sinorhizobium_melilo.1 AL591985.1/580383-580598 CAUACCAGAUCAUGUGAUGGU...UCCGCCCGACUGA................AGAAC....GGCGGAUG......AAAA..GGGAA.C.AC.G.G.UGAGGACGACCCAUCAGGGGCU............AAAACCGU.GGCUGCCC.CC.GCAACUGUGA..GC.GG..........CGAGCAAAGUCCAAGGAU...........................GCCAUUGGCCAUGAAU.........................................................CGG.CUGAUAAGGC...GGA..C.AA..AGCUACGAC...................................................................CCGC.AAGCCAGGAGACCUGCCAUCACCUUGGGCGACACG
Sinorhizobium_melilo.2 AL591688.1/954760-954963 UUAGAUGAGGACACUCAAGGUG..CCGCCUC......................GAAGGGA..GGGCGGAG......AAUU..GGGAA.G.CC.G.G.UCA...............................AAUCCCGG.CGCUGCCC.CC.GCAACGGUGG..UG.GAGCG.......AACAGCCACGGCAGAAG............................GCCACUGGACACCGC...........................................................GU.CCGGGAAGGC...GCC..G.GG..CAGGUCCCUU.........................................................GCGGACGGCUCCA.GAGCCCGGAAACCAGCCUUGAAGCAGAAAUAGACC
Sinorhizobium_medica.1 CP000738.1/1657203-1656988 GCCAUAUGACAGCCGUCAGGUG..CCCGC........................UUUUA....UGUGGGAG......AAUC..GGGAA.G.CC.G.G.UGC...............................AGUUCCGG.CACGUG.C.CC.AACGCUGUGA..AG.GG..........GACGUUCUCGCCAAAAACAGGCUCUGAAUCUUUUCAGAGCUUU..GCCACUGAAUUUUAAAGU.......................................................GAU.UUGGGAAGGC...GGC..G.GG..AGCGGAUGA...................................................................UCCG.AAGUCAGAAGACCGGCCUGGCGAGAUAGACCGGCC
Sinorhizobium_melilo.3 AL591688.1/1999767-1999554 GGCCAUAUGCCGCCGUCAGGUG..CCCGCGA......................AAUG.......CGGGGG......AAUC..GGGAA.G.CC.G.G.UGC...............................AGUUCCGG.CACGUG.C.CC.AACGCUGUGA..AG.GG..........GACGUUCUCGCCAAAAAGGGCUCUGAAUCUUUUCAGAGCUUU...GCCACUGAAUAUUGAAGC.......................................................UAU.UCGGGAAGGC...GGC..G.CG..AACGGAUGA...................................................................UCCG.AAGUCAGAAGACCGGCCUGGCGAGAUAGACCGGCC
Sinorhizobium_melilo.4 AL591985.1/66246-66476 ACAUUAACUGGGACCGACGGU...UCCCCUACCCGUGA...............GGUGG....AGGGGAUU......AAUA..GGGAA.C.AC.G.G.UGCGGACGACCCAAGAGGGACC............AAAACCGU.GGCUGCCC.CC.GCAACUGUAA..GC.GGA.........UCGUCGUUCAUCCUUGUGGCGCCAAGGCGCCA.............GCCACUGCGCGCGUU...........................................................GC.GCGGGAAGGC..AGAU..G.AG..CGACUCUGU...................................................................CCGU.GAGCCAGGAGACCUGCCGUCAAAUCGAUCCAACGU
Sinorhizobium_medica.2 CP000739.1/543105-542876 ACAUUAACUGGGACCGACGGU...UCCCCUACCCGAGA...............GGUGG....AGGGGAUU......AAUA..GGGAA.C.AC.G.G.UGCGGACGACCCAAAAGGGACC............AAAACCGU.GGCUGCCC.CC.GCAACUGUAA..GC.GGA.........UCGUCGUUCAUCCUCGUGGUGCCGAGGCACCA.............GCCACUGCGC..GAC...........................................................GC.GCGGGAAGGU..AGAU..G.AG..CGACUUCUGU..................................................................CCGU.GAGCCAGGAGACCUGCCGUCAAAUUCGAUCCAUCG
Sinorhizobium_medica.3 CP000738.1/523907-524111 UUAGAUGGACACACUCAAGGUG..CCGCCUG......................AAGGGA...GGGCGGAG......AAUU..GGGAA.G.CC.G.G.UCA...............................GAUCCCGG.CGCUGCCC.CC.GCAACGGUGG..UG.GAGCG.......AACAGCCACGGCAGAAG............................GCCACUGGACAGCGC...........................................................GU.CCGGGAAGGC...GCC..G.GG..UAGGUCCCCC.......................................................UGCGGGACAGCUCCA.GAGCCCGGAAACCAGCCUUGAAGCAGAAACGAAUC
Xanthobacter_autotro.1 CP000781.1/3651336-3651132 UUUAGUGCCCCUGUCGAAGGU...CCCGUGG......................UCCCA....CACGGGCGC.....AAAA..GGGAA.U.GC.G.G.UGCGGGAGGUCUCUCCC.................AAUGCCGC.GGCUGCCC.CC.GCAACUGUAA..GC.GG..........UGAGCCCCUGCCACAU.............................GCCACUGUCGCCGCAAG........................................................GCG.CCGGGAAGGC...GGU..G.GG..GGCGCUGAU...................................................................CCGC.GAGCCAGGAGACCUGCCUUCGACAAGGUCCGCGCC
Xanthobacter_autotro.2 CP000781.1/4182310-4182509 UAUAGUCGUCCCGUCGUCGGUG..UUCGCUU......................UCGG......GCGGACC......AAGA..GGGAA.U.GC.G.G.UGCGGGAGUUUCUCCC..................AAAGCCGC.GGCUGCCC.CC.GCAACUGUCG..GC.GGU.........GAGCGGGCCUGCAACAU............................GCCACUGGA..GCAA............................................................U.CCGGGAAGGC...GCA..G.GC..UUCGCAAUGA.................................................................CCCGC.GAGCCAGGAGACCUGCCGGCGACAUCCUGCCCGUU
Rhodobacterales_bact.1 AATR01000002.1/37098-37316 GCAAACAGGUUUUUGCAUGGU...UCCCCAUUAAAGUCAUAAUAA........AUGGC....UGGGGAUC......AAAU..GGGAA.U.GU.A.G.ACAGGGACUACCCGAAUGGGGCCU..........AAAGCUGC.AACCGCCC.CC.GCGACUGUGU..GC.GG..........AGAGUGAAGCCCAAA..............................GCCACUGGU..GAAA............................................................A.CUGGGAAGGC...GGG..C.AA..AACGAUCUAU..................................................................CCGU.GAGUCAGGAAACCAGCCUUGCAACGGCGUUAUCGC
Hyphomonas_neptunium.1 CP000158.1/1548021-1548210 ACAUCAACCCCAUCAGAUGGUG..CUCCCCU......................GACA......GGGAGCU......AAGA..GGGAA.G.CC.G.G.UGU...............................AAAUCCGG.CGCUGUAC.CC.GCAACUGUUA..GC.CGG.........GAGCUGAUGGCCACUAU............................GCCACUGGAACGCGA..........................................................GUU.CUGGGAAGGC...GGC..C.AA..AGGCGACGAU..................................................................CGGU.GAGCCAGGAGACCUGCCAUCGCGUCGUUUGUCCGG
Hyphomonas_neptunium.2 CP000158.1/1153196-1153386 ACGCCGCCUCACGCAACAGGUG..CCCGGAU......................CAUGG....UCCGGGUG......AAAA..GGGAA.G.CC.G.G.UGA...............................GAAUCCGG.CGCUAUGC.CC.GUAACUGUGA..GC.GG..........GGAGCCGUGUGAGCCAUAC..........................GCCACUGG...GAAA..............................................................CCGGGAAGGCAGCUCU..C.UC..CGGCGAUGAU..................................................................CCGCGAAGUCAGGAGACCUGCCUGUUGCCGUCGUUGGCUC
Maricaulis_maris_MCS.1 CP000449.1/2738434-2738239 UAGCUUUCGCGCCGCGAUGGU...UCCCU........................CACG........GGAAU......AAUA..GGGAA.G.CU.G.C.UCAGGCCUUCGGGCC...................AAGUCCAG.CGCUGUUC.CC.GCAGCCGUAG..GC.GGC.........GAGCGGUGAGGCACAAA............................GCCACUGGGG.GUGA...........................................................CC.CUGGGAAGGC...GCU..U.CA..UCCGCAUUGA.................................................................CCCGC.AAGCCGGAAGACCUGCCGUCGCUGUCGUCUGUCCG
Oceanicaulis.1 AAMQ01000002.1/102723-102924 CACACCGACAUACGCGACGGUU..CUCCCGC......................GAGG........GAGCG......AAGA..GGGAA.CACC.G.G.UGCGACGCGCGAGCGUC.................UGGUCCGG.GGCUGUAC.CC.GCAACUGUGA..GC.GGC.........GAGCGAGGCGUCAACA.............................GCCACUGGAUCGUCA..........................................................GAU.CUGGGAAGGC...GGC..G.CA..UCGCAUUGAC..................................................................CCGC.AAGCCAGGAGACCUGCCGACGCGGUCGCUCGUUCA
Dinoroseobacter_shib.1 CP000830.1/164274-164052 CGCAGAACAGUCAGGCAUGGU...UCCCCGUGCCCGCGCCAAG..........CGCCC....GGGGGAUC......AAAU..GGGAA.U.GU.G.G.AACGGUCCGAUCCAAACCGGAGGACC........AAAGCCUC.AGCCGCCC.CC.GCGACUGUAU..GC.GG..........AGAGGGAGAUCGACAU.............................GCCACUGGGG..CCC..........................................................GCC.CCGGGAAGGC...CGA..U.CC.ACCCCGAUGAC..................................................................CCGC.GAGCCAGGAGACCAGCCAUGCGCGACACCCUUAGC
Dinoroseobacter_shib.2 CP000830.1/546421-546638 AGCGAUGCUCUGAUCGAUGGU...UCCCGAAACCCGCGA..............GGGUG....AAGGGAUG......AAAA..GGGAA.C.AC.G.G.UGAGGCGUAGCCAUCAGGCACC............AAACCCGU.GACUGCCC.CC.GCAACUGUGA..GC.GG..........UGAGCGACCCCGUGGAC............................ACCACUGGACCGAUGC.........................................................GGU.CCGGGAAGGU...UCG..G.GG..AAGCCGUGAC..................................................................CCGC.GAGUCAGGAGACCUGCCAUCGAUGGUGCGCUUUCG
Jannaschia.1 CP000264.1/2958160-2957972 GAACAGGGUCACGGCGAUGGU...GCCCUUC......................UUGG......AGGGCCU......AAGA..GGGAA.C.GC.G.G.UGA...............................AACCCCGC.GGCUGCCC.CC.GCAACUGUAA..GC.GG..........UGAGCGGACCUGCGUAU............................GCCACUGAGCCGACA..........................................................AGC.UCGGGAAGGC..GCAG..G.CC..CCGCCCUGAC..................................................................CCGC.AAGCCAGGAGACCUGCCAUCACCUGUGAAACGCAU
Jannaschia.2 CP000264.1/2259475-2259261 UGAAAUCAAACUGGUGAUGGU...GUUUCGACAUCCAAGA.............CGAUG....UCGGACUG......AAAA..GGGAA.U.AC.G.G.UGAGGACGCGCCUUAGGGCACC............AAAUCCGU.AACUGCCC.CC.GCAACUGUAA..GC.GG..........UAAGCGACGCCAAAUAU............................GCCACUGGGA.CAGC...........................................................UC.CCGGGAAGGU...UGG..C.CA..AGCGUUGAU...................................................................CCGC.AAGUCAGGAGACCUGCCAUCAGGUGUUGAAACAUU
Labrenzia_aggregata_.1 AAUW01000004.1/197975-198192 GUUUAGGAAGAAACUGACGGU...UCCGGAGAAGGCCUUG.............CCCGA....UCCGGAUG......AAAC..GGGAA.U.CC.G.G.UGAGGGCUUUUCAAGUCC................GGGUCCGG.AGCUGCCC.CC.GCAACUGUGA..GC.GG..........UGAGUGGCUGUACGAAA............................ACCACUGGCGUCCUGAUG.......................................................GGG.CCGGGAAGGG..GUAC..A.GA..CCGCGCUGAG..................................................................CCGC.AAGCCAGGAGACCGGCCGUCGCAUUGGCAACCCUU
Labrenzia_aggregata_.2 AAUW01000003.1/68358-68148 AAACCUAGAUCGUGUGAUGGUU..UCGCCCGAACAAGC...............GUAAC....GGCGGAUG......AAAU..GGGAA.C.AC.G.G.UGAGGCGUACCCAACAGGGACC............AAGACCGU.GGCUGCCC.CC.GCAACUGUAA..GC.GA..........AGAGCAAAGCCCUUGA.............................GCCACUGGA..GCGA............................................................U.CCGGGAAGGC...GGG..C.UG..CGCGGAGAC...................................................................UCGC.GAGCCAGGAAACCUGCCAUCCAGCGGUCCCAUUGG
Labrenzia_aggregata_.3 AAUW01000028.1/66358-66145 GAGCACUUAGGAAGAGAUGGU...UCCCGACUCUGAACU..............UCGGA....GCGGGAUU......AAAA..GGGAA.C.AC.G.G.UGAGACCAGGCCGCAAGGCUUC............AAAUCCGU.GACUGCCC.CC.GCAACUGUGA..GC.GGU.........GAGCAAACCUGAAAGC.............................GCCACUGGGG..AAA...........................................................CC.CCGGGAAGGA...UCA..G.GC..AAGCUAUGAC..................................................................CCGC.AAGUCAGGAGACCUGCCAUUUCACCUUAAACCUUA
Loktanella_vestfolde.1 AAMS01000001.1/256679-256898 GGCACAACAUGACGGCACGGU...UCCCCGCACGGCGCGCA............GCGUC....AGGGGAUC......AAAU..GGGAA.U.GU.G.G.ACGCGCCGAUCCUGUCAGGGAGGCGC........CAAGCCAC.AGCCGCCC.CC.GCGACUGUAU..GC.GGA.........GAGUGCCUUGUUAACAU............................GCCACUGGG...UCC..........................................................G.C.CCGGGAAGGC...AAC..A.AG..GUGCAUCGAC..................................................................CCGC.AAGCCAGGAGACCAGCCAUGCACCGGGGAUCGCCC
Maritimibacter_alkal.1 AAMT01000006.1/185943-186161 GCCACAAGGAUAAGGCAUGGUU..CCCGACACGGCGCAA..............AGCGC....CAAGGGAG......AAUAU.GGGAA.U.GC.G.G.AGGGGUGAUCCAAACCGGAGCCU...........UCAGCCGC.AGCCGCCC.CC.GCGACUGUGAC.GC.GG..........CGAGCGCCCGCCGGAU.............................ACCACUGAGC..CUC..........................................................GGC.UCGGGAAGGU...GGC..G.AA..GCGCGACGAC..................................................................CCGCAAAGCCAGGAGACCUGCCAUGUGAAACGAAACCCCA
Oceanicola_batsensis.1 AAMO01000002.1/489939-490150 GGCACAACCGAAAGGCAUGGU...UCCUCAGACGGGUCUC.............AGGCC....CGAGGAUC......AAAU..GGGAA.U.GC.G.G.AGAGGCGACCCACAUCGGGGCCU...........UCAGCCGC.AGCCGCCC.CC.GCGACUGUGA..GC.GG..........AGAGCAUGUGUCACGA.............................GCCACUGG...GCAA..............................................................CCGGGAAGGC...GGC..A.CG..AUGCGACGAC..................................................................CCGC.GAGCCAGGAGACCAGCCCUGCGUCAAUUCUAACCG
Oceanicola_granulosu.1 AAOT01000001.1/134844-135060 GCACAAAGAUCCCCGCAUGGU...UCCAGCCGGACGCGUCAC...........GCGGC....CGAGGAUC......AAAA..GGGAA.U.GC.G.G.UGCGGGCGGAUCCAAACAGGACGCCC........AAUGCCGC.AGCCGCCC.CC.GCGACUGUCA..GC.GGA.........GAGCGUCUCGCCAUC..............................GCCACUGG...GCAA..............................................................CCGGGAAGGC...GGC..G.CG..ACGCAGUGAC..................................................................CCGC.AAGCCAGGAGACCUGCCAUGCACCGGCUUUUGCCG
Paracoccus_denitrifi.1 CP000489.1/1337566-1337356 CCAUGAGGGCCGAGCUACGGU...UCCGGCG......................GCGUGCC..UCCGGAUU......AAAA..GGGAA.UCCC.G.G.UGCGCCUGACCUGUUCAGGC..............AAUGCCGG.AGCUGCCC.CC.GCAACUGUAU..GC.GGU.........GAGUGACGGUCGAUCAU............................GCCACUGGCGCGAAU..........................................................GCG.CCGGGAAGGC...CGG..C.CC..GAACGAUGAC..................................................................CCGC.AAGCCAGGAGACCUGCCGCAGCAAUCACCCAUUUC
Paracoccus_denitrifi.2 CP000489.1/2543185-2543386 GCACAGACAUGGGGCGCUGGUU..CCUGUCC......................UAUG......ACAGGCU......AAGA..GGGAA.U.GC.G.A.CAGGCAACCGCCU.....................GAAA..GC.AGCCGCCC.CC.GCGACCGUGA..CC.GG..........AAAGGUCGCCCCUCU..............................GCCACUGGC..GAAA............................................................G.CCGGGAAGGC...GGG..G.CG..GCCGUGGGCC.......................................................CAGGCCCGAAUCCGC.AAGCCGGGAGACCUGCCGGUGCAGAAGGAUUGACC
Paracoccus_denitrifi.3 CP000489.1/1328400-1328204 CGCUAUGGCGGAGUUGUCGGU...UUCCG........................CAAG........GAAUU......GAAA..GGGAA.U.CC.G.C.CGGGGCAUCAGCCC....................CGAACCGG.AACUGCCC.CC.GCAACUGUAG..GC.GG..........CGAGCAGGGUGCGAAACA...........................GCCACUGUGGCCCAU..........................................................GCC.AUGGGAAGGC..CGCA..U.CC..CUGCCGUGAC..................................................................CCGU.CAGUCAGGAGACCUGCCGACGCGAUGACCAACCCG
Paracoccus_denitrifi.4 CP000489.1/2539767-2539972 GUAACAUAUGCGUGUAUCGGUG..CCCCU........................UUCG........GGGCC......AAAA..GGGAA.U.GC.G.G.UGCCGUCUCCGGCGUCUUGGGGACC.........AAAUCCGC.AGCCGCCC.CC.GCGACUGUAG..GC.GGA.........GAGCGGACGCCCAUCGU............................GCCACUGGCC.AUCC...........................................................GG.CCGGGAAGGC...GGG..C.GU..CAGCCGUGAC..................................................................CCGC.GAGCCAGGAGACCUGCCGAUGCGUGAAACCGCAAU
Paracoccus_denitrifi.5 CP000490.1/163550-163337 CCUAUAUGUAGGCAUCACGGUU..CUUUCGGGUCGAUC...............CGACC....CGAAAGCG......AAGA..GGGAA.G.CC.G.G.UGCGCCUUUCGGGGC...................AAGGCCGG.CGCUGCCC.CC.GCAACUGUAA..GC.AGC.........GAGCCUGCGCCGGAUCAC...........................GCCACUGGUGCCGCACG........................................................GCA.UUGGGAAGGC...CGG..C.AA..GGGCAGCGAC..................................................................CUGC.GAGCCAGGAGACCUGCCGUGAUGAUGACGAUGAAC
Paracoccus_denitrifi.6 CP000490.1/1566394-1566586 GCUAACUGCAACGGUCAUGGUUG.UCCCGGG......................GCCGACU..CGGGGAUG......AAAA..GGGAA.G.CC.G.G.UGA...............................AAAGCCGG.CACUGCCC.CC.GCAGCUGUAA..GC.GGA.........GAGCGACGCCGGAUCA..............................CCACUGGGGCCACGC.........................................................GCC.CCGGGAAGG....CCG..G.CC..AAGCCGAGAC..................................................................CCGC.AAGUCAGAAGACCUGCCAUGACGCGAAAGGACGAA
Paracoccus_denitrifi.7 CP000490.1/155234-155429 CUACCAAGUCGCUGCAUCGGU...UUCCG........................CAAG........GAAUG......AAAA..GGGAA.U.CC.A.G.CGCGCCCGAUGGGCGC..................GAAAC.GG.AACUGCCC.CC.GCAACUGUAG..GC.GG..........CGAGCGCGAUCUGGCAG............................GCCACUGGGCACGAU...........................................................GU.CCGGGAAGGC..AGGA..U.CC..GCGCAACGAC..................................................................CCGC.CAGUCAGGAGACCUGCCGGCGCGAAUUCACCAGAC
Paracoccus_denitrifi.8 CP000490.1/1574718-1574933 GCAAUGCGGGGCCGCUACGGU...UCCGGCGC.....................GAUCU....GCCGGAUG......AAAA..GGGAA.CACC.G.G.CGCGCCCAUCGCCGCGAUGCGGACGGGC......AAGGCCGG.GGCUGCCC.CC.GCAACUGUAG..GC.GGU.........GAGCGAAGGCCGAAGGC............................GCCACUGGGA.AGAU...........................................................CC.CCGGGAAGGC...CGG..C.CC..GAGCGAUGAU..................................................................CCGC.CAGCCAGGAGACCUGCCGCAGCGAUCACCCAUUUC
Paracoccus_denitrifi.9 CP000489.1/1319736-1319936 AUUUUACCGUCAGAUCAAGGUG..CCGGG........................GAAAU....CUCCGGGU......AAAA..GGGAA.U.UC.G.G.UGAGGCUGUCGCC.....................AAAUCCGA.AGCUGCCC.CC.GCAACUGUAG..GC.GG..........AGAGCCUGUCCGACAU.............................GCCACUGGCGCGGAUUUC.......................................................GCG.CCGGGAAAGC...UGG..A.CC..AGGUAAAGAU..................................................................CCGC.AAGUCAGGAAACCUGCCUGGAUCAAUCACCUGUUC
Paracoccus_denitrifi.10 CP000491.1/325972-326168 ACUACACGGUCGGGUGACGGU...UUCCGAU......................UUCG........GAAUG......AAAA..GGGAA.C.GC.A.G.UGCGGACCAGCCGGUCC.................CAUGCUGC.GGCUGCCC.CC.GCAACUGUAG..GC.GG..........AUAGCCUUUGCCAACG.............................GCCACUGGGU.GCGA...........................................................CC.CCGGGAAGGC...GGC..G.AC..AGGCGACGAC..................................................................CCGC.GAGCCAGGAGACCUGCCGUCAGCCGUUGUCACGCG
Pelagibaca_bermudens.1 AATQ01000040.1/37497-37304 CUAGAUAUAGGUGCUUCAGGUGCUCGGCGGA......................AUCAU....CCGCCGGC......AAGA..GGGAA.G.CC.G.G.UGA...............................AAAGCCGG.CACUGCCC.CC.GCAACUGUAA..GC.GG..........CGCGCGAGGCCGAUCAU............................GCCACUGGGGCUGCC..........................................................ACC.CCGGGAAGGC...CGG..U.CA..AGCGGGACCC.................................................................GCCGC.GAGUCAGGAGACCUGCCGGAAGCAACAGGAUUUGA
Pelagibaca_bermudens.2 AATQ01000007.1/84467-84279 UUAAGCGGAGCGGGCCUCGGUU..CCGGGCC......................UUGU.......CCGGAG......AAUA..GGGAA.C.GC.G.G.UGC...............................AAACCCGC.GACUGCCC.CC.GCAACUGUGA..GC.GGU.........GAGUGCGACCGGCAUAU............................GCCACUGGGCGAAAC...........................................................GC.CCGGGAAGGC...CCG.CG.UC..GCGCGAUGAC..................................................................CCGC.AAGUCAGGAGACCUGCCAAGGUGAUCACCCUCCCC
Pelagibaca_bermudens.3 AATQ01000008.1/108753-108536 CAUCACUGACGCAUAUCCGGU...CCCGGUGCAGUC.................UCUGC....CCCGGGCGCA....AGAA..GGGAA.C.GC.A.G.UGCGGCACGGGCCAUUCGGUCACGGCC.......AAUUCUGC.GACUGCCC.CC.GCAACUGUAA..GC.GGC.........GAGCAACGGCUGAUCGU............................GCCACUGGA..GCAA............................................................U.CCGGGAAGGC...CAG..C.CC..GCGCGAUGAC..................................................................CCGC.AAGUCAGGAGACCUGCCGGAUACGCGCCCCUGGAA
Pelagibaca_bermudens.4 AATQ01000008.1/90798-91010 CGCAUCUGGCACCACGCUGGUG..CCUGUGU......................AAAC........AGGUG......AAAA..GGGAA.U.GC.G.C.CAGCCCGGGAAACCGGG.................UCAAGCGC.AGCCGCCC.CC.GCGACCGUGA..CC.GG..........AAAGGUCCUCC...ACC............................GCCACUGGC..CUUG..........................................................C.G.CCGGGAAGGC...AGG..G.GG..GCCGCUGGAU................................................GGCGCUGCCAUCCUGCAUCCGC.AAGCCGGGAGACCUGCCAGCGCAAGACGACACCAA
Rhodobacter_sphaeroi.1 CP000577.1/1528291-1528485 CACCACUUCCGGCGCGCUGGUU..CCUGUCC......................GACCG....GACAGGCG......AAGA..GGGAA.U.GC.C.....C...............................CAGA.GGC.AGCCGCCC.CC.GCGACCGUGA..CC.GG..........AGAGGUUGCCC....AA............................GCCACUGGCC.GCAA...........................................................GG.CCGGGAAGGC....GG..G.CC..GCCGCGGAGC...................................................CGCAAGGCCCCACAUCCGC.AAGCCGGGAGACCUGCCAGCGCUGAGACUGACGGG
Rhodobacter_sphaeroi.2 CP000662.1/267567-267380 UCAUCACAGGGACGCUUUGGUU..CCCGCGGC.....................AGCAC....CGCGGGCU......AAGA..GGGAA.G.CC.G.G.UGG...............................GAAUCCGG.CACUGCCC.CC.GCAACUGUAA..GC.GG..........CGAGCCUUGCUUCGAA.............................ACCACUGGCC..AAU...........................................................GG.CCGGGAAGGG...AAG..C.CG..GGCGCCCGAG..................................................................CCGC.AAGCCAGGAGACCUGCCAGAGCCACAGAGACGACC
Rhodobacter_sphaeroi.3 CP000144.1/239679-239466 GUCACGCCGGGCUAUGACGGU...UCCCGAACGCCGCA...............AGGUC....AAGGGAUG......AAAA..GGGAA.C.GC.G.G.UGAGGGGUGCUGACCCC.................AGUUCCGC.GACUGCCC.CC.GCAACUGUGA..GC.GGC.........GAGCCCGCCCCGAAGAC............................GCCACUGGACCGAAAG.........................................................GGC.CCGGGAAGGU..UCGG..G.GA..AGGCCGCGAC..................................................................CCGC.GAGUCAGGAGACCUGCCGUCGAGCGCGCAAGCGCC
Rhodobacter_sphaeroi.4 CP000578.1/656987-656780 GUCACCUCAUGGCACGACGGU...UCCCGAAGGUCGCAA..............GGCCC....GAGGGAUG......AAAA..GGGAA.C.GC.G.G.UGAGGGGAAACCC.....................GAGGCCGC.GACUGCCC.CC.GCAACUGUGA..GC.GGC.........AAGCCGCCCCGACGGAC............................ACCACUGGCC..GAU...........................................................GG.CUGGGAAGGU...UCG..G.GG..AUCGGCCACG................................................................ACCCGC.GAGUCAGGAGACCUGCCGUCGGGCGCAUCCGCGCC
Rhodobacter_sphaeroi.5 CP000662.1/326212-326417 AAUGACAGGCGCGUGAUCGGU...UCACCCGGGCGUCAU..............GCGUC....CGGGGAUU......AAAA..GGGAA.C.GC.G.G.UGCGCCCCGAAGGGGC..................AAGACCGC.GGCUGCCC.CC.GCAACUGUGA..GC.GG..........UGAGCGACGCCGAAGAU............................GCCACUGGGA....G..........................................................AUC.CCGGGAAGGC...CGG..C.CG..AGCCGAGAC...................................................................CCGC.GAGCCAGGAGACCUGCCGCUCGCCCGCCGGCCCCC
R.capsulatus.1 AF010496.1/105318-105541 CCACUCAGGGCGGGCGCUGGUU..UCUGUCC......................UAUG......ACAGGCG......AAGA..GGGAA.U.GU.G.A.AGGGAAUUGCGACGGCUUUGCCGCGAAAC.....CCGACCGC.AGCCGCCC.CC.GCGACCGUGA..CC.GG..........AGAGGGCGCCCCGAG..............................GCCACUGGC..ACCA............................................................G.CCGGGAAGGC...GGG..G.CG..ACCGUGAGGG...................................................GACCCCCCCUCGCAUCCGC.AAGCCGGGAGACCUGCCAGCGCAUGGAUUUCGGGC
Rhodobacter_sphaeroi.6 CP000578.1/651773-651962 GCAUCGUCGGCUGGCCCUGGUU..CCCGCGG......................CGAUCC...CGCGGGCG......AAGA..GGGAA.G.CC.G.G.UGC...............................AAGUCCGG.CGCUGCCC.CC.GCAACUGUGA..GC.GG..........CGAGCCAUCUGCCAU..............................GCCACUGGCCCCCAC..........................................................GGG.CCGGGAAGGG...GCA..G.CC..GGCGUCCGAG..................................................................CCGC.GAGCCAGGAGACCUGCCGGGCCUUGACGACCAUCC
Rhodobacter_sphaeroi.7 CP000662.1/314827-314627 UUCAACGGCAGCGUCAUCGGUU..CUUCCGG......................CAACG....GAAGAGGA......AAGA..GGGAA.U.GC.G.G.UGAGGCCGGAUGGCC...................GACUCCGC.GGCUGCCC.CC.GCAACUGUGA..GC.GG..........UGAGCGAGGCCGACAU.............................GCCACUGGGCGCCCU...........................................................GC.CCGGGAAGGC...CGG..C.CG..AAGCUGUGAU..................................................................CCGC.GAGCCAGGAGACCUGCCGCUGGCGCGCGGGGAGCG
Rhodobacter_sphaeroi.8 CP000661.1/387171-386964 GCCGAUGGUGCGCGGGACGGUU..CCCGGGG......................GCAGC....CCCGGGCG......AAGA..GGGAA.U.GC.G.G.UGCGGGCCUGUUCGGCCC................CAAGCCGC.GACUGCCC.CC.GCAACUGUAG..GC.GGC.........GAGCGCGUCCCAUCAUG............................CCCACUGGCCCCGGAC.........................................................AGG.CCGGGAAGGG...CGG..G.AC..AAGCCGAGAC..................................................................CCGC.GAGUCAGGAGACCUGCCGUCAUCGGACCUGUAACA
Rhodobacter_sphaeroi.9 CP000143.1/2531295-2531502 ACGGAAGGUGCGGGCGACGGUU..CCCGGAG......................GAAGC....UCCGGGCG......AAGA..GGGAA.U.GC.G.G.UGCGGGCCUGACAGGCCC................CAAGCCGC.GACUGCCC.CC.GCAACUGUAG..GC.GGC.........GAGCGCGUCCCAUCAUG............................CCCACUGGCCCAGGAC.........................................................AGG.CCGGGAAGGG...CGG..G.AC..AAGCCCAGAC..................................................................CCGC.GAGUCAGGAGACCUGCCGUCGACGGACCUGUAACA
Rhodobacter_sphaeroi.10 CP000578.1/1093642-1093821 GCUUUGUGGCAGGGGUCAGGUG..CCGCCUU......................CGGG........CGGAG......AAUC..GGGAA.G.CC.G.G.UGG...............................AAAUCCGG.CGCGGG.C.CC.GCCGCUGUGA..CG.GG..........GAUGCUUCGGGCAAGAG............................GCCACCGGUU................................................................CG.CCGGGAAGGC...GCC..C.GG..CGGCAGAUGA..................................................................ACCG.GAGCCAGAAGACCGGCCUGACGCAGAGGUUCCCGC
R.capsulatus.2 AF010496.1/39869-39652 GGCACCUUCGCGGCAGAUGGUU..CCCGGCCAAGCCAC...............GCGCG....GCCGGGUG......AAAA..GGGAA.U.AC.G.G.UGUGGUGUAGGCAUCAGCCGCC............AAAUCCGU.AACUGCCC.CC.GCAACUGUAA..GC.GG..........CGAGCACCCCCCGGCA.............................ACCACUGGCCCCGACCGCG......................................................GGG.CCGGGAAGGU...GGG..G.....AAGCCACGAC..................................................................CCGC.AAGUCAGGAGACCUGCCAUCAGCGUCAUCAACCGC
Rhodobacter_sphaeroi.11 CP000661.1/1554899-1555094 CACCACUGCCGCCGCGCUGGUU..CCUGUCC......................GCAAGC...GACAGGCG......AAGA..GGGAA.U.GC.C.....C...............................CAGA.GGC.AGCCGCCC.CC.GCGACCGUGA..CC.GG..........AGAGGUUGUCC....AU............................GCCACUGGCC.GAAA...........................................................GG.CCGGGAAGGC....GG..A.CC..GCCGCGGGAC...................................................CGCAAGGCCCCACAUCCGC.AAGCCGGGAGACCUGCCAGCGCUGAGACUUACGGG
Rhodobacter_sphaeroi.12 CP000577.1/1097204-1097404 AUAUUGAGGAACGGCUUCGGU...UCCGGCG......................UGAUG....GCCGGAUG......AAAA..GGGAA.C.GC.G.G.UGCGGGGAGAUCUCCCC.................AACUCCGC.GGCUGCCC.CC.GCAACUGUAG..GC.GGC.........GAGCGACGACCGACGGC............................GCCACUGGGA....U..........................................................GUC.CCGGGAAGGC...CGG..U.CC..GAGCUGCGAC..................................................................CCGC.AAGUCAGGAGACCUGCCGGAGCGAUCACCCUUUCC
Rhodobacter_sphaeroi.13 CP000664.1/92637-92429 GUCACGCCAUGCCAUGACGGU...UCCCGAGGGUCGCAC..............GGCCC....GAGGGAUG......AAAA..GGGAA.C.AC.G.G.UGAGGGGGAAACCCC...................GAGUCCGC.GACUGCCC.CC.GCAACUGUGA..GC.GG..........CGAGCCGCCCCGACGGAC...........................ACCACUGGCC..GAU...........................................................GG.CCGGGAAGGU..UCGG..G.GA..CGGCCACGAC..................................................................CCGC.GAGUCAGGAGACCUGCCGUCGGGCGCAUCCGCGCC
Rhodobacter_sphaeroi.14 CP000578.1/48121-47921 GGCUACUCAAUCCUCGUCGGU...UUCCG........................UAAG........GAAUU......GAAA..GGGAA.U.CC.G.C.CGCCGGACCUGUCCGG..................CGAACCGG.AACUGCCC.CC.GCAACUGUAG..GC.GGC.........GAGGAGCUCGCGAUCAAA...........................GCCACUGUGGCCUCAA.........................................................GCC.AUGGGAAGGC...CGC..G.CC..AGCCCUGUGA.................................................................CCCGC.CAGUCAGGAGACCUGCCGGCGUUCGAUCUCAACGC
Rhodobacter_sphaeroi.15 CP000662.1/491640-491462 GUCUCAGCUACUGCGUCAGGUG..CCGCCCG......................CGGG........CGGAG......AAUC..GGGAA.G.CC.G.G.UGC...............................GACUCCGG.CGCGGG.C.CC.GCCGCUGUGA..CG.GG..........GAUGCUUCGGGCAGGAU............................GCCACCGGUU................................................................CG.CCGGGAAGGC...GCC..C.GG..GGCAGGUGA...................................................................ACCG.GAGCCAGAAGACCGGCCUGACAAAGAGGUUCCUGC
R.capsulatus.3 AF010496.1/116971-117194 GCUACUCCAACAGGCGAUGGU...UCCCA........................ACUGG....ACGGGAUU......AAUA..GGGAA.C.AC.G.G.UGAGGAUUACCCAUCAGGGGCC............UAAUCCGU.GGCUGCCC.CC.GCAACUGUGA..GC.GGC.........GAGACGACGGUCGAAG.............................ACCACUGGCCCCCCCGAUCCACCGGGGAGAA..........................................CGG.CCGGGAAGGU...GAC..C.CG..AGUUGAUCGA.................................................................ACCGC.AAGUCAGGAGACCUGCCAUCGCUCUGGCGUCGCAA
Rhodobacter_sphaeroi.16 CP000662.1/326137-325950 GCAUCGUCGCGGUGCCCUGGUU..CCCGCGG......................UGAUCC...CGCGGGCG......AAGA..GGGAA.G.CC.G.G.UGC...............................AACUCCGG.CGCUGCCC.CC.GCAACUGUGA..GC.GG..........CGAGCCAUCUGCCAU..............................GCCACUGGCC..CCC..........................................................GGG.CCGGGAAGGG...GCA..G.CC..GGCGUCCGAG..................................................................CCGU.GAGCCAGGAGACCUGCCGGGCCUUGACGACCAUCC
Rhodobacter_sphaeroi.17 CP000661.1/1410118-1410316 CUAUUGAGAAACGGCUUCGGU...UCCGGCG......................UCAU.....GCCGGAUG......AAAA..GGGAA.C.GC.G.G.UGAGGGGUGCCCCUCC..................AAAUCCGC.GGCUGCCC.CC.GCAACUGUAG..GC.GGC.........GAGCGACGACCGAUCAC............................GCCACUGGGG....U..........................................................UCC.CCGGGAAGGC...CGG..U.CC..GAGCGAAGAC..................................................................CCGC.GAGUCAGGAGACCUGCCGGAGCGAUCACCCUUUCC
Roseobacter.1 AAYC01000003.1/148871-149085 CAUUUAGCCAAAGUGACUGGU...UCUACGAGUGCUUCAA.............UGCGC....AGUGGAAGA.....AAUA..GGGAA.C.AC.G.G.UGCGGCGUACCCAAAAGGGACC............AAAUCCGU.GACUGCCC.CC.GCAACUGUGA..GC.GG..........UGAGUGACGCUGAACAA............................GCCACUGGGG..UUC...........................................................UC.CCGGGAAGGC...CAG..C.UG..AACCAAGAC...................................................................CCGU.GAGUCAGGAGACCUGCCGGACACAAAGAACGAUAG
Roseobacter.2 AAYC01000005.1/205052-205266 CUCAUACAUAGCGCUGAUGGUU..UUUCCGGGGGACA................CUCCU....GGAAAAUG......AAAA..GGGAA.U.AC.G.G.UGAGGUGUAGCCAACAGGCGCC............AAAUCCGU.GACUGCCC.CC.GCAACUGUGA..GC.GGA.........GAGCAUUGCUGCAACAA............................GCCACUGCCC..CAA..........................................................GGG.GUGGGAAGGC...GUA..G.CA..AGGCAUCGAC..................................................................CCGC.GAGUCAGGAGACCUGCCAUCUAGUAGUUCACCAAC
Roseobacter.3 AAYC01000008.1/31758-31987 GAUAGCGCUGGAGAGGAUGGU...UCCUGCGAGACACAAACUG..........UGUGU....CCAGGAUG......AAAA..GGGAA.C.GC.G.G.UGCGGCUGGUACUGAUCAGCC.............AAUUCCGC.GACUGCCC.CC.GCAACUGUAA..GC.GG..........UGAGCGGACCGGGUGA.............................ACCACUGGCAUGGAGUUUUGCGCUCC...............................................AGG.UUGGGAAGGA...CCG..G.UU..UCGCAGCGAC..................................................................CCGC.AAGUCAGGAGACCUGCCAUCAUAUGAAAACUCGAA
Roseobacter_denitrif.1 CP000362.1/3701518-3701322 GAAAAUGCAGGGCACGAUGGUU..GUUCCGGUU....................CAGGC....CGGGACAU......AAAA..GGGAA.C.GC.G.G.UGA...............................AAUGCCGU.GGCUGCCC.CC.GCAACUGUAA..GC.GAA.........GAGUGCCUCUGUCGCAC............................GCCACUGACCGAAAGAC........................................................GGG.UUGGGAAGGC..AAAA..G.AG..GCGCGCUGAC..................................................................CCGC.GAGCCAGGAGACCUGCCAUCACAAACGCAACAUAA
Roseobacter.4 AAYC01000003.1/114698-114499 AAUUUUCCUAUUAAGUAAGGUG..UCGUCCC......................AUUG.....GGGCGGAG......AAUU..GGGAA.G.CC.G.G.UGU...............................GAAUCCGG.CACUGCCC.CC.GCAACGGUAACAUC.GGG.........CAAGGGCGUAGCAAGA.............................GCCACUGGGACGAGG..........................................................ACC.CCGGGAAGGC...GCU..G.CG..GCCGGUCAUU..........................................................UGACCCCGAUGA.AAGUCCGGAAACCAGCCUUGCCUUGAUAGUCAAAC
Roseobacter.5 AAYC01000005.1/102065-102276 GCGCAAGGGGGUUCAGCUGGUU..CCUGG........................GGAAA....CCUGGGCG......AAGA..GGGAA.U.GU.GAC.AGCUGGAAUUAUCUGGCA................AAAAGCAC.AGCCGCCC.CC.GCGACCGUGA..CC.GG..........AUGAGACCGCC....AU............................GCCACUGGG..ACAC............................................................C.CCGGGAAGGC...AGG..A.GG..GUCGACAGAG...................................................CGCACGCUCUGGCAUCCGC.AAGCCGGGAGACCUGCCAGCAAGAGGAGAUUUCAA
Roseobacter.6 AANB01000001.1/655385-655158 CGCAAGGGGGUUUUUGUUGGUU..CCUGCAA......................AUUG.......CAGGCG......AAGA..GGGAA.U.GU.G....ACAGGCUGAUAGGGAUUUUUGCUAUCAGCUCU.CAAG.CAC.AGCCGCCC.CC.GCGACCGUGA..CC.GG..........AAAGGUCUCU....GAU............................GCCACUGGCCCACCG...........................................................UG.CCGGGAAGGC....AA..G.AG..CACCGCAGAC...............................................AGGCAUCGCCCGUCGAAAUCCGC.AAGCCGGGAGACCUGCCAACGCAUGAGACAACGAG
Roseobacter_denitrif.2 CP000362.1/3352019-3351799 GGAAAGGGUUCUGGGGAUGGU...GUUCGGAAAGCCAAAA.............GCAAU....CCGGGCUG......AAAA..GGGAA.U.AC.G.G.UGCGGCGUUCGUAACAGACGCC............AAGUCCGU.GACUGCCC.CC.GCAACUGUAA..GC.GGU.........GAGCGACCCCGAUGAUC............................ACCACUGGGUGCAUCCG........................................................CAU.CCGGGAAGGA...UCG..G.GC..AAGCUGUGAC..................................................................CCGC.AAGUCAGGAGACCUGCCAUCAUCGAUGUAACUUCA
Roseobacter.7 AAYC01000003.1/275906-275694 CGCCUACCUGUUUUCGAUGGUU..CCUCAGGGCAGA.................AUGCU....GAGAGGAUGA....AAAA..GGGAA.C.AC.G.G.UGAGGUGUAGCCAACAGGCGCU............GAAUCCGU.GACUGCCC.CC.GCAACUGUAA..GC.GG..........AUAGCGACGCCAAGCA.............................CCCACUGGCC.GUAA...........................................................GG.CUGGGAAGGA...UGG..C.GC..AGCCAAGAC...................................................................CCGC.AAGUCAGGAGACCUGCCAUCGUGAAUUCAACCAAG
Roseobacter.8 AAYB01000001.1/493900-494119 GCAAACAGUACCCGUGAUGGU...UCCCAAAGCGCCGAAAA............UGCGU....CUGGGAUG......AAAA..GGGAA.U.AC.G.G.UGAGGAAGAGCCAAAGCGCGCC............AAAUCCGU.AACUGCCC.CC.GCAACUGUGA..GC.GGC.........GAGCGACCCCGAUGAUC............................ACCACUGAGC.AAAC...........................................................GC.UCGGGAAGGG..AUCG..G.GC..AAGCAGCGAC..................................................................CCGCGAAGUCAGGAGACCUGCCAUCAAAGGGCGUCGAAAU
Roseobacter.9 AAYC01000002.1/248003-247819 UGAGCGGAAUCAGUUUCAGGUG..CCCUGCU......................CUUG......UAGGGAG......AAUC..GGGAA.G.GC.G.G.UGC...............................AAAUCCGC.UGCGUG.C.CC.AACGCUGUAA..CG.GG..........GACUGGUCGACGAAUAU............................GCCACUGAAG.UCAC...........................................................UU.UCGGGAAGGG...CGU..C.GA..CUGGGGUGA...................................................................UCCG.AAGCCAGAAGACCGGCCUGGAACCCAUAUUGCCGC
Roseobacter.10 AANB01000001.1/641586-641368 GAGCAGUGACCUAUCGAUGGU...UCCACUGAAGCCCA...............AGGCU....UUUGGAUG......AAAA..GGGAA.U.CC.G.G.UGAGGUGUAGCCAAAAGGCGCC............AAACCCGG.AACUGCCC.CC.GCAACUGUGA..GC.GG..........CGAGCCACUGGGAUAA.............................GCCACUGAUCUGCACAGC.......................................................AGG.UCGGGAAGGC...CCC..A.GA..CCGGCCCAGA.................................................................CCCGC.AAGUCAGGAGACCUGCCCUCGUGAGUUGACCAUAG
Roseovarius.1 ABCL01000001.1/663982-664208 UGCAUACCGGACGUGCAAGGU...UCCUCGUUUGGGCGCAAAG..........CGCCU....CGGGGAUG......AAAU..GGGAA.U.GA.C.G.UGCCGGUGGACCCAAUUAGGGCGCC.........UAUGCGUC.AGCCGCCC.CC.GCGACUGUAA..GC.GG..........CGAGCCCCUGCCAGAU.............................GCCACUGAGGUGCCUAUG.......................................................ACC.UUGGGAAGGC...GGC..A.GA.CAGGCGACGAC..................................................................CCGC.GAGCCAGGAGACCAGCCCUGCGUUCGUCAAUCCCG
R.nubinhibens.1 AALY01000002.1/281935-282138 CUAGGCUAAAGCUCUCAGGGUG..CCGUCCUCG....................CAAGG....GGCCGGAG......AAUU..GGGAA.G.CC.G.G.UGC...............................AAGUCCGG.CGCUGCCC.CC.GCAACGGUAA..GG.AG..........GGGUGGUUGGGCGAUAU............................GCCACUGGGCCGCGA..........................................................GGC.CUGGGAAGGU..AGCC..C.GA..UCACAGGCCA........................................................GAUGGCCGUCCACC.AAGCCCGGAAACCAGCCAUGAGACAACGUCAGAAC
Roseovarius.2 AAMV01000013.1/62699-62923 UGCAUACGAGAGUGGCAAGGUU..CCUCGUUUCGGUGCAAA............GCGCC....GCGAGGAU......AAAU..GGGAA.U.GA.C.G.UGCCGGCGGACCCAAUCAGGGCGUC.........CAUGCGUC.AGCCGCCC.CC.GCGACUGUAA..GC.GG..........CGAGCCCCUGCCAGAU.............................GCCACUGAGGUGUAAAA........................................................CCC.UUGGGAAGGC...GGC..A.GA.CAGGCGACGAC..................................................................CCGC.GAGCCAGGAGACCAGCCCUGCGUUUGUUAAUCCCG
R.nubinhibens.2 AALY01000002.1/134769-134968 AGCAUUGUCGCCCCUGAUGGUU..GCCCGGG......................ACGAAU...CCGGGCUG......AAAA..GGGAA.C.GC.G.G.UGCGGGUCUGACCC....................AAUUCCGC.GGCUGCCC.UC.GCAACUGUAA..GC.GG..........CGAAUGUCUCGCACCAU............................GCCACUGGCC..CUC..........................................................GGG.CUGGGAAGGC...GCG..A.CC..CAUGAUGAC...................................................................CCGC.AAGCCAGGAGACCUGCCAUCCAGGGCGCUGUCCGG
Roseovarius.3 AAMV01000014.1/59909-60128 UUAGGCUGAUCCUGUCAUGGUG..CCAUGCCGACAGCAGUCCACUGC......UCUCG....GGAUGGAG......AAUU..GGGAA.G.CC.G.G.UGC...............................GAUUCCGG.CGCUGCCC.CC.GCAACGGUAA..GG.GA..........GGGCGUUUCGGCGAUAU............................GCCACUGGGCGACAA..........................................................UGC.UCGGGAAGGU...GCC..G.CG..ACGCGAGGGU.....................................................CAUCCGGCCCGCCAUCC.AAGCCCGGAAACCAGCCUUGGCGUGACGUCGAAUC
Roseovarius.4 ABCL01000003.1/119153-118953 CUAGGCUGAUCCUGUCAGGGUG..CCGCCCU......................UUGG......GGCGGAG......AAUU..GGGAA.G.CC.G.G.UGU...............................AACUCCGG.CGCUGCCC.CC.GCAACGGUAA..GG.GA..........GGGCAUUUCGGCGAUAG............................GCCACUGGGCAAUUU...........................................................GU.CCGGGAAGGU...GCC..G.AG..AUGCGAGGGC.....................................................CAUUUGGCCUGCCGCCC.AAGCCCGGAAACCAGCCUUGGCGGAUCGUCGAAUC
R.nubinhibens.3 AALY01000001.1/1587847-1587653 GGGUGUCACUGCGGCGUCGGU...UUUCG........................AUGG........AAACU......AAUA..GGGAA.U.CC.G.C.GGCGUCCAGCAGGGCG..................UCAACCGG.AACUGCCC.CC.GCAACUGUAG..GC.GGC.........GAGCUGCAUCUUCAGA.............................ACCACUGGGC..CGA..........................................................GGU.CUGGGAAGGG...AAG..A.UG..ACGCCAUGAG..................................................................CCGU.GAGUCAGGAGACCUGCCGACGCAUAACCUGAAACC
Ruegeria.1 CP000376.1/216700-216497 UACAACUCUGCCCUACGAGGUG..CUGUCCG......................GGCUUUCC.GGACGGAG......AAUU..GGGAA.G.CC.G.G.UGC...............................GAUUCCGG.CGCUGCCC.CC.GCAACGGUCA..UG.GGAUU.......CGCGGGCGUAACAUCU.............................GCCACUGGGAGGAGG...........................................................AC.CCGGGAAGGC...GUU..G.CG..CUCCGACCAG.........................................................CAGGUCACCCCCA.GAGCCCGGAAACCAGCCUCGGCAGAUAUCGUCAAC
Ruegeria.2 CP000377.1/548354-548161 UCAAUAUCGUGUUGCUUUGGUU..CUUUCGA......................GGCGACU..CGCAAGCG......AAGA..GGGAA.A.CU.G.G.UGA...............................AAAUCCGG.UGCUGCCC.CC.GCAACUGUAA..GC.GG..........CAAGCCCUGCCC...GU............................GCCACUGACGCAUCGCU........................................................GCG.UUGGGAAGGC...GGG..A.GG..GGGCGUUUGA.................................................................GCCGCGAAGCCAGGAGACCUGCCAGAGCACGACACACGACG
Ruegeria_pomeroyi_DS.1 CP000031.1/3073055-3073267 GGCUAAAUGAAGGGGUCUGGU...CCUGCCGGAG...................CAAUC....CGGAUGCU......AAGA..GGGAA.U.UU.G.G.UGCGACCGCCCGUCGGUU................CAGGCCAA.AGCCGCCC.CC.GCGACUGUAA..GC.GGU.........GAGCCUCUGUUCAACCA............................GCCACUCCCGGGUUCGCCC......................................................CCG.GGGGGAAGGC...GAA..C.AG..AGGCACUGAC..................................................................CCGC.GAGCCAGGAGACCUGCCAGACAGGCACUGUAACAC
Ruegeria_pomeroyi_DS.2 CP000031.1/3757898-3758110 CGCUACCGCUGGGUCGAUGGU...UCCCGGUCGUGC.................AUGCG....CCGGGAUG......AAAA..GGGAA.C.AC.G.G.UGCGGCCCUCUGGCGACAGAGGACC.........AAUGCCGA.GACUGCCC.CC.GCAACUGUAA..GC.GG..........UGAGCGAUGCCGAAAU.............................GCCACUGGCC..CCC..........................................................GGG.CCGGGAAGGC...CGG..C.AA..AGCCCGGAC...................................................................CCGC.AAGUCAGGAGACCUGCCAUCGCAACCGUAACUCGA
Ruegeria_pomeroyi_DS.3 CP000031.1/3058882-3059105 CCGCAUGUCCGCCCUGUUGGUG..UCCGGGC......................AACC........GGAUG......AAAA..GGGAA.U.GC.G.C.CAGCGGUUCCGGGACAUGAUCCCGGGCAGCCG..UCAAGCGC.AGCCGCCC.CC.GCGACCGUGA..CC.GG..........AGAGGGUGCCC....AA............................GCCACUGGCC.AAAU...........................................................GG.CCGGGAAGGC....GG..G.AC..AUCCGCCAGA...................................................GCAGCGCUCUGACAUCCGC.AAGCCGGGAGACCUGCCAGCACCCGAACUGCAACC
Ruegeria.3 CP000377.1/2318941-2319180 GCGCAAGGAAAUUUCGUUGGUU..CCCGAAGGUGA..................CAGCC....UUUGGGCG......AAGA..GGGAA.U.GU.G.U.CGGGCCGGGAUCAUCCUUGCU.............CCAAACAC.AGCCGCCC.CC.GCGACCGUGA..CC.GG..........AGAGGUCUUCC...AAC............................GCCACUGGCGCGCCCCUUGUGGGC.................................................AGG.CCGGGAAGGC...AGG..G.AG..ACCGUUCGCG.............................................CCCCACUCGGGGCGGAUCUAUCCGC.AAGCCGGGAGACCUGCCAACGCGUGAGAACCGGCG
Ruegeria.4 CP000377.1/2333297-2333511 GCAUUGUCGACGGCAUACGGU...GUCCCAGAGCGCAA...............AGCGC....CGGGACUG......AAAC..GGGAA.U.GA.G.G.AACGGCGGACCCAAUCGCGGCGCC..........AAAGCCUC.AACCGCCC.CC.GCGACUGUGA..GC.GG..........UGAGCGACAUUCAGCA.............................UCCACUGGCC..GCU..........................................................GGG.CCGGGAAGGA...GAA..U.GA..UCGCCGCGAC..................................................................CCGC.GAGUCAGGAGACCGGCCGUAUGAAACGAGGACAGU
Ruegeria.5 CP000377.1/3101368-3101583 CCGCAUGAGAGGGGCGAUGGU...UCCCCGACGCCUAA...............GGCCG....GUGGGAUG......AAAA..GGGAA.U.UC.G.G.UGCGGAGGAGCCAAAGGGCGCC............AAAUCCGA.AACUGCCC.CC.GCAACUGUAA..GC.GG..........CGAGCGCCCCGUCACAG............................CCCACUGAUCCUCAU..........................................................GGA.UCGGGAAGGG...AGG..G.AC..GCGCAAUAAC..................................................................CCGC.AAGUCAGGAGACCUGCCAUCGCGACUUUUUAACCA
Ruegeria.6 CP000377.1/185492-185258 CGUAGCAUCCAGACAGAUGGU...UCCUGCCUCUGU.................UUGGG....GUGGGAUG......AAAA..GGGAA.U.AC.G.G.UGAGGCUUUGGACCAUUGGGUCCCGCC.......AAGUCCGU.GACUGCCC.CC.GCAACUGUGA..GC.GGC.........GAGUUCCCCGGCAAAG..............................CCACUGACCCCAACGUCGUAACCGGCAAAAAA........................................GGG.UCGGGAAGG....GCC..G.GU..UCGCGAUGAC..................................................................CCGC.AAGUCAGGAGACCUGCCAUCGGCAAUGUAAACCUG
Sagittula_stellata_E.1 AAYA01000018.1/10947-10742 CAAGGAAAUCGCAUGUCCGGU...UCCGGAGUUUU..................CACGC....UUCGGAGGA.....AAGA..GGGAA.U.GC.A.G.UGCGGCACGCGAGUGCC.................UACCCUGC.AGCUGCCC.CC.GCAACUGUAA..GC.GG..........CAAGCAGGGCUGAUAU.............................GCCACUGGA..GAAA............................................................U.CCGGGAAGGC...CAG..U.CCAGAUGCGAUGAC..................................................................CCGC.GAGCCAGGAGACCUGCCGGACUGGCGCCUCAGGAA
Sagittula_stellata_E.2 AAYA01000008.1/50513-50733 UGCUUAACGAUCCGCGAUGGU...UCCCGGAACGCCAGCAA............GCCAA....CCGGGAUG......AAAA..GGGAA.C.AC.G.G.UGAGGAUGUCCGCAAGGUGCC.............GAAUCCGC.GACUGCCC.CC.GCAACUGUGA..GC.GG..........AGAGCGAUCCUGAGAAC............................ACCACUGGGCCGGUAGGC.......................................................GGC.UCGGGAAGGU...UCG..G.GA..AAGCGUUGAC..................................................................CCGC.AAGUCAGGAGACCUGCCAUCUCCGGCGCGCUCCGC
Sagittula_stellata_E.3 AAYA01000006.1/294690-294473 CGCAUCAGCCGGAGUGCUGGUG..CCUGUGU......................CUAG.......CAGGUG......AAAA..GGGAA.U.GC.G.C.AGCCCCGCGUCGGGG...................UCAGGCGC.AGCCGCCC.CC.GCGACCGUGA..CC.GG..........AAAG..GGCCCGAA...............................GCCACUGGCG.ACAU...........................................................CG.CCGGGAAGGC...CGG..G.UU..CCGUUGGGAU.........................................CGGCAGGACUGCCUGCCGCCCAGUUCCGC.AAGCCGGGAGACCUGCCAGUGGCCGCGCCGUGGAA
Sagittula_stellata_E.4 AAYA01000006.1/51136-50945 GCGAUCCCGUCCGUGUCAGGUG..CCUCC........................GUCCU....CGGGGGAG......AAUC..GGGAA.G.CC.G.G.GGC...............................AGAACCGG.CGCGGG.C.CC.GCCGCUGUGA..CG.GG..........GACGGGGCGGACACAUG............................GCCACUGGGCGUCAGUCAGG.....................................................CGC.UCGGGAAGGC...GUC..C.GU..UCCGGAUGA...................................................................UCCG.AAGCCAGAAGACCGGCCUGACGGCAUGGCGGCCCC
Sulfitobacter.1 AALV01000003.1/110855-110656 UGUCAUCGAAACCGGGUCGGU...UUCCU........................UCGG........GAAAU......AAUA..GGGAA.U.UC.G.C.CAUCCGCCCUUUGGUGUGGA..............UGAACCGG.AACUGCCC.CC.GCAACUGUAG..AC.GG..........UGAGCUACCUCCAUCAU............................GCCACUGGGCCUAAA..........................................................GGU.CCGGGAAGGC...GGG..G.AC..AGCCGCGAU...................................................................CCGU.CAGUCAGGAGACCUGCCGACACUGAACCUGAAACA
Sulfitobacter.2 AALV01000001.1/473478-473696 CAAUGCAGGGCGUAUGUUGGUU..CCUGUCC......................CAGA.......CAGGCG......AAGA..GGGAA.C.GC.G.A.UACGCAUUGAUCCAGCCUUGGGUCAGCGC.....CAAG.CGC.AGCCGCCC.CC.GCGACCGUGA..CC.GG..........AGAGAGCUUUCAA.................................CCACUGGCC.CGCA...........................................................GG.CUGGGAAGG....UGA..A.GG..UUCGCAAGGC....................................................AAGCUGCCUUAGAUCCGC.AAGCCGGGAGACCUGCCAGCAUAGUUUGUAACGGG
Sulfitobacter.3 AALV01000001.1/486810-487026 UGACCACCUAUUCCGGACGGUU..CCCCGUGCGCCUUCG..............GGCAA....UCGGGGUG......AAAA..GGGAA.U.AC.G.G.UGCGGUGCCAAAGCAAAGGUGCC...........AAAUCCGG.AACUGCCC.CC.GCACCUGUAA..GU.GA..........AGAGCAACCCGCAUU..............................GCCACUGGGCCACAC..........................................................CGC.CUGGGAAGGC...GCG..G.CA..CGCAUGGAC...................................................................GCACAAAGUCAGGAGACCUGCCGUCAUGGGGAUGAUCCCC
Sulfitobacter.4 AALZ01000005.1/160175-160353 GGCCCAAUGGCCGGGUCUGGUG..UCCGCCU......................CGC.........GGAAG......AAUC..GGGAA.G.CU.G.G.UGA...............................AACUCCGG.CACGUG.C.CC.AACGCUGUAA..UG.GG..........GAUGGUUUGCGCAUAG.............................GCCACUGGAA....U..........................................................AUU.CCGGGAAGGC...GCG..C.GG..ACCAGACGA...................................................................CCCU.AAGUCAGAAGACCGGCCAGACAGUACAGCUUGCCC
Granulibacter_bethes.1 CP000394.1/902076-901862 CUAAGCAUGCCUGGUCGUGGUU..CUGCGGGUCCGUCAAAGAC..........GAACG....CCGGAGCC......AAGA..GGGAA.U.CC.G.G.UGCGCAUCAGC.......................AAAGCCGG.AGCUGCCC.CC.GCAACUGUAA..GC.GGC.........GAGCCUGCAUCCACCGAC...........................GUCACUGAGGCUUCC..........................................................GCC.UCGGGAAGAC..AGGA..UCGC..AGGCAAUGAC..................................................................CCGU.GAGCCAGGAGACCUGCCACGACACCAUAAUCGUCC
M.magnetotacticum.1 AAAP01003877.1/22278-22051 AUUAUAGUGCCGGGUGAUGGUU..CCCCGCGUCCGCUU...............AGGGC....AAGGGGUG......AAAAU.GGGAA.C.GU.G.G.UGCGGCGCCCGAAAAGGGGGCC............AAUUCCGC.GACUGCCC.CC.GCAACUGUAG..GC.GGA.........GAGGUUCCGGCCGUUAGAGAC........................GCCACUGGCCCUGAAAUG.......................................................GGG.CUGGGAAGGC.UAUGC..C.GG..ACCCAACGAC..................................................................CCGC.GAGUCAGGAGACCUGCCAUCAUCGAGAGUCGCUUG
M.magnetotacticum.2 AAAP01002228.1/195-394 CCUAGCGUGGCCGUCGACGGU...UCCCG........................AAAG........GGAUC......AAAA..GGGAA.C.GC.G.G.UGAAGGGCCUUUGCCC..................GAUCCCGC.GGCUGCCC.CC.GCAACUGUGA..GC.GGA.........GAGCCCUCCAUCACCAC............................GUCACUGGGCGAGCCUU........................................................CGC.CUGGGAAGAC...GAU..G.GA..GGACAACGAC..................................................................CCGC.GAGCCAGGAGACCUGCCGUCAGCCGUGGUCACACG
M.magnetotacticum.3 AAAP01002012.1/63-265 GCACAUCCUGGAAGUGACGGU...UCCCU........................UCGG........GGAUC......AAAA..GGGAA.C.GC.G.G.UGAGGACUUUCGGGUCC.................GAUGCCGC.GGCUGCCC.CC.GCAACUGUAA..GC.GGC.........GAGCCUUUUCACCACCGAU..........................GUCACUGGAUGAGCCU.........................................................CAU.CCGGGAAGAC..GGUG..A.GA..CGGCGACGAC..................................................................CCGC.GAGCCAGGAGACCUGCCGUCAGCCGUGGUCACACG
M.magnetotacticum.4 AAAP01003520.1/1076-875 GGCCAAGAUCAUCCCGACGGU...UCCCG........................CAAG........GGAUC......AAAA..GGGAA.C.GC.G.G.UGAGGACCGUUCGGUCC.................GAUGCCGC.GGCUGCCC.CC.GCAACUGUGA..GC.GGC.........GAGCCUUUUCGCCACCGAC..........................GUCACUGGGCCACCU..........................................................CGC.CCGGGAAGAC..GGUG..A.GA..AGGCGACGAC..................................................................CCGC.GAGCCAGGAGACCUGCCGUCAGCCGUGGUCACACG
M.magnetotacticum.5 AAAP01003421.1/1751-1551 GGUUAGAAGGUCAGCGACGGU...UCCCU........................UCGG........GGAUC......AAAC..GGGAA.C.GC.G.G.UGAGGGUUCGCCCUC...................GAUGCCGC.GGCUGCCC.CC.GCAACUGUGA..GC.GGC.........GAGCCUUUUCACCACCGAU..........................GUCACUGGAUGGGCCU.........................................................CAU.CCGGGAAGAC..GGUG..A.GA..GGGCGACGAC..................................................................CCGC.GAGCCAGGAGACCUGCCGUCAGCCGUGGUCACACG
Magnetospirillum_mag.1 AP007255.1/306940-307165 AUUAUAGUGCCCGGCGAUGGUU..CCCCGCGACCGGCG...............ACGGC....GCGGGGUG......AAAAU.GGGAA.C.GC.G.G.UGAGGCACCCGAAAAGGGGGCC............GAUUCCGC.GACUGCCC.CC.GCAACUGUAG..GC.GGA.........GAGGUUCCGGCCCUGAGAGAU........................GCCACUGGCCCGAAAA.........................................................GGG.CUGGGAAGGC.UAUGC..C.GG..ACCCAACGAC..................................................................CCGC.GAGUCAGGAGACCUGCCAUCAUCGAGAGUCGCUUG
M.magnetotacticum.6 AAAP01003109.1/772-976 CAAAGGUCGUGCGGCCAAGGUU..CCUGCGGACUC..................UUCCC....CGUGGGCU......AAGA..GGGAA.U.CC.G.G.UCGGUUCGUCC.......................GAUGCCGG.AGCUGCCC.CC.GCAACUGUGA..GC.GG..........CGAGCUCCCGCCGCGAGAG..........................GUCACUGGUGCCCCG...........................................................CA.CCGGGAAGGC.CGGGC..G.GG..GGCGCUGAC...................................................................CCGU.GAGCCAGGAGACCUGCCUCGGCACGACGAUAUUCC
Rhodospirillum_rubru.1 CP000230.1/1340533-1340749 GGCUAGCCUGCGGCUGACGGU...UCCCCCCAAGCGCA...............AGCCG....AAGGGAUU......AAAA..GGGAA.C.AC.G.G.UGCAGGCGAAGGAUUUGUCC..............GAAACCGU.GGCUGCCC.CC.GCAACUGUGA..GC.GGC.........GAGCCUUCCUCCGAUGAAA..........................ACCACUGGGGCGCGU..........................................................GCC.UUGGGAAGGG...GGA..U.GA..AGGCGAUGAC..................................................................CCGU.GAGCCAGGAGACCUGCCGUCCGACCCUAAUCCAUG
Rhodospirillum_rubru.2 CP000230.1/2009119-2009340 GUAAGCUUUGAGGAUCGUGGUU..CUUUGGCACCGUUUUGUC...........GGGUG....CCGGAGCU......AAGA..GGGAA.U.CC.G.G.UGAGCCGCGUUUUGGC..................GAUGCCGG.AGCUGCCC.CC.GCAACUGUAA..GC.GG..........CGAGCCGCUGUCAAGACGU..........................GCCACUGCCCCCGGCAAGG......................................................GGG.GUGGGAAGGC.CAGAC..A.GC...GGCGACGAC..................................................................CCGU.AAGCCAGGAGACCUGCCGCGAUGUCAUAACCUCCC
Rhodospirillum_rubru.3 CP000230.1/1707586-1707782 UAGCCUAUGUUGUGUUACGGUU..CCCCGGACACCAC................AAUAU....CCGGGGCU......AAGA..GGGAA.G.CC.G.G.UGC...............................GAUGCCGG.CGCUGCCC.CC.GCAACUGUCA..GC.GGC.........GAGCCUUCAUCCAUUCAU...........................GCCACUGGGG.AAAU...........................................................UC.CCGGGAAGGC...GGA..C.GA..AGGCGACGAC..................................................................CCGU.GAGCCAGGAGACCUGCCGUGACCCUUGAAACGUCC
Rhodospirillum_rubru.4 CP000230.1/1501900-1501675 UACCGUAUUUAGCGUUACGGUU..CCUUGGGUAUGC.................AAUAU....CUAGGGUG......AAGA..GGGAA.G.AC.G.G.UGCGCCCUUGAAGGGC..................AAUGCCGG.CGCUGCCC.CC.GCAACUGUGA..GC.GGC.........GAGCCCGCGUCCAAGACU...........................GCCACUGGUGCGCCGGUCCUUCGGAACCG............................................GCC.CCGGGAAGGC..CGGA..C.GG..GGGCUGUGAC..................................................................CCGC.AAGCCAGGAGACCUGCCGUAAUGGCCGCAACGUCC
Erythrobacter_litora.1 CP000157.1/1649862-1649676 CGGCUGCUUCACGUCACGGGUU..GCCGC........................GUAAC....ACCGGCCG......AAGA..GGGAA.G.GG.A.G.UGC...............................GAUGCUCC.CGCUGCCC.CC.GCAACUGUGA..CC.GGG.........GAGCGACCCUGCCAAGG............................GCCACUGGU...UUC..........................................................G.A.CCGGGAAGGC..GGCG..G.GG..AAGCGACGAU..................................................................CCGG.GAGCCAGGAGACCUGCCCGAGACCGUCGCUUGAGC
Novosphingobium_arom.1 CP000248.1/1228186-1228384 UGGCGCGCCGACGCCAGAGGUG..CCCGGUA......................ACAC........GGGCU......AAGA..GGGAA.G.CC.G.G.UUC...............................GAUUCCGG.CGCUGCCC.CC.GCAACUGUAA..CC.GGA.........UAGCGCGUCGCCCAUUCAU..........................GCCACUGGUGUCGGCUUCGGCCA..................................................GCA.CCGGGAAGGC..GGGC..G.AC..GAGCCGUGAC..................................................................CCGG.AAGCCAGGAAACCUGCCCUUGGUUGUCGUUCCGCG
Sphingomonas_wittich.1 CP000699.1/5269738-5269503 UCCAAUGGAUGCUGUCGAGGUU..CCCUGCUCGCGAUCCGGCAACGGGUC...GCGCG....GCAGGGCU......AAGAC.GGGAA.G.CC.G.G.UGACGUCCGCGAGGACG.................GAGUCCGG.CGCUGCCC.CC.GCAACUGUAA..GC.GGC.........GAGCGGCGGUUUCAACCAU..........................GCCACUGGCGCCCCGCGAGGA....................................................GCG.CCGGGAAGGC.CGGAG..C.CG..CCGUGACGAC..................................................................CCGU.GAGCCAGGAGACCUGCCUCCGACGCGAUAACGUUC
Sphingomonas.1 AAQG01000024.1/17748-17526 GUUGAAGGAGCCUGUCGAGGUU..CCCCGCUUCAGGCA...............UGACG....GCGGGGCU......AAGAC.GGGAA.G.CC.G.G.UGGUGCCCUUUGGGCA..................GAGUCCGG.CGCUGCCC.CC.GCAACUGUAA..GC.GGC.........GAGUGGUGGCUCCAUUUUGU.........................GUCACUGAGCUUUUGCACGA.....................................................GGC.UCGGGAAGGC.CGGAG..C.CA..UUGCGAUGAC..................................................................CCGC.AAGCCAGGAGACCUGCCUUCGACGGCAUAACGUUC
Sphingomonas.2 AAQG01000005.1/141632-141818 AACGGCCGCGCUGCGACAGGU...UCCCC........................GGCGA....CGGGGAUG......AAAAU.GGGAA....C.G.G.AUA...............................ACAUCCG...GCUGCCC.CU.GCAACUGUAU..GC.GG..........UGAGUCAUCGGCCAUAU............................GCCAUUGGAAGCGCAG.........................................................CUU.CCGAGAAGGC..GACC..G.AC..CGGCGUUGAC..................................................................CCGC.AAGCCAGGAGACCUGCCCGUCGCCGUCGUCUUUCG
Sphingomonas_wittich.2 CP000699.1/3500758-3500554 AAAGCGCACGGCGCGACAGGU...UCCCGGA......................AACG........GGAUC......AA.A..GGGAA.U.UC.G.G.AAGCGGGAUCGUCCCG..................CAAGCCGA.AGCUGCCC.CC.GCAACUGUGA..UC.GG..........CGAGCGAUCGUCCAUCCCGC.........................GUCACUGGAUGCUCCGG........................................................CAU.CCGGGAAGGC.CGGAC..G.AG..ACGCGACGAC..................................................................CCGA.GAGCCAGGAGACCUGCCCGUCGCGGUCGUUCCAUC
Z.mobilis.1 AF193754.1/4343-4142 GCAAUGAGGAAGGAUUAAGGUU..CUUUGUC......................AUUG.....GCAAAGCU......AAGA..GGGAA.A.CU.G.G.UGCGAAAGAAUUUUC...................AAAGCCAG.UGCUGCCC.CC.GCAACUGUAA..AC.GG..........CGAGCAAAGAUCAAAAU............................GCCACUGAUA.UUAU...........................................................UA.UCGGGAAGGC..UGAU..C.GG..ACGCGGUGAC..................................................................CCGUCAAGUCAGGAGACCUGCCUUAAACCAAGUCAUCCAC
Z.mobilis.2 AF193754.1/24966-24788 GGAAAUUUUUUUGCAUAGGGU...UUCCUUC......................GAGUG....AAGGAA........AAUU..GGGAA.C.AA.G.G.UGC...............................AAAACCUU.GGCUGCCC.CU.GCAACUGUAA..AC.AG..........UUGA..AACGCCAAAAA............................GCCACUGAAU....C..........................................................UAU.UCGGGAAGGC...GGU..U.GU..UUCGAUG.....................................................................CUGU.GAGCCAGGAGACCGACCCUAUGUAAUCGUUCCACG
B.ubonensis.1 ABBE01000883.1/365-556 UACGCCCGUUCGUUCGCCGGC...GCCCC........................UCGG........GGCCG......AAGA..GGGAA.C.AC.A.G.GGC.GCGUGCCGC.....................GCCGCUGU.GGCUGCCC.CC.GCAACUGUAG..GC.AGCG........AGCCCGCCUCCAUCUCGC...........................GCCACUGG...CUUG..........................................................U...CCGGGAAGGC..CUGG..A.GC..GGGCGUCGAC..................................................................CUGU.CAGCCAGGAGACCUGCCGGCUUGAAAGUGCGUGCG
Burkholderia_xenovor.1 CP000271.1/1989295-1989475 AGGCAUAAUACAGCCGCCGGUU..GCCCU........................UCGG........GGCCG......AAGA..GGGAA.C.AC.A.G.UGC.................................CACUGU.GGCUGCCC.CC.GCAACUGUAU..GC.AGCG........AGUCCGCCUGCGCUUCAC...........................GCCACUGGUU...............................................................CGA.CCGGGAAGGC...CGC..A.GC..GGACCAUGAC..................................................................CUGC.CAGCCAGGAGACCUGCCGGCGAGACUGUUCGUGCC
Burkholderia_cenocep.1 AAKX01000098.1/49369-49176 UUACCCUUGCGCGCUGAUGGU...UCCCGGA......................GACG........GGAUC......AAAA..GGGAA.C.GC.A.G..GCGAGGCAACGCCUC..................GAAGCUGC.GGCUGCCC.CC.GCAACUGUGA..GC.GG..........CGAAUCCGUGCCACCGCAU..........................GCCACUGG...GAAA..............................................................CCGGGAAGGC..CCGC..A.CG..GACGACGAC...................................................................CCGC.GAGCCAGGAGACCUGCCAUCGACCCGAGGUCCAGC
Burkholderia_multivo.1 AP009385.1/1806044-1805855 UACGCGCGUUCGUUCGCCGGU...GCCCU........................UCGG........GGCCG......AAGA..GGGAA.C.AC.A.G.GGCGCAUCGCGCC.....................G...CUGU.GGCUGCCC.CC.GCAACUGUAG..AC.AG..........CGAGCCGAUCUCCCCCUCAU.........................GCCACUGGU...UUC............................................................A.CCGGGAAGGC..CGGG..A.GC..AGGCGCCGAC..................................................................CUGU.CAGCCAGGAGACCUGCCGGCCUGAAAGUGCGUGCG
Burkholderia_multivo.2 AP009386.1/1277939-1278133 UUACCCUUGCGCGCUGAUGGUU..CCCGCGA......................GACG........GGAUC......AAAU..GGGAA.C.GC.A.G.UGACGGCGCACGCCG...................GAAUCUGC.GGCUGCCC.CC.GCAACUGUAA..GC.GG..........CGAGUCCGUGCCCUUCGC...........................GCCACUGG...GAGA..............................................................CCGGGAAGGC..GGGC..A.CC..GGGCGGCGAC..................................................................CCGC.GAGCCAGGAGACCAGCCAUCGACCGAGGUCCAAGC
B.ambifaria.1 CP000440.1/1742843-1742651 UACGGCCGUUCGUUCGCCGGU...GCCCU........................UCGG........GGCCG......AAGA..GGGAA.C.AC.A.G.GGCGCGUAUCGC......................GCUGCUGU.GGCUGCCC.CC.GCAACUGUAG..AC.AG..........CGAGCCGAUCUCCCCCCUCAU........................GCCACUGGU...UUC............................................................A.CCGGGAAGGC..CGGG..A.GC..CGGCGCCGAC..................................................................CUGU.CAGCCAGGAGACCUGCCGGCCUGAAAGUGCGUGCG
B.ambifaria.2 CP000441.1/778547-778740 UUACGCUUGCGCGCUGAUGGU...UCCCGGG......................AACG........GGAUC......AAAA..GGGAA.C.GC.A.G.GAGAGGCAGCGCCUC...................GAAUCUGC.GGCUGCCC.CC.GCAACUGUAA..GC.GG..........CGAAUCCGCGCCACCACAC..........................GCCACUGG...GAAA..............................................................CCGGGAAGGC..CGGC..G.CG..AAUAACGAC...................................................................CCGC.GAGCCAGGAGACCUGCCAUCGACCCGAGGUCCAAG
Burkholderia_ambifar.1 CP001025.1/1786797-1786605 UACGGCCGUUCGUUCGCCGGU...GCCCU........................UCGG........GGCCG......AAGA..GGGAA.C.AC.A.G.GGCGCGCAUCGC......................GCCGCUGU.GGCUGCCC.CC.GCAACUGUAG..AC.AG..........CGAGCCGAUCUCCCCCCUCAU........................GCCACUGGU...UUC............................................................A.CCGGGAAGGC..CGGG..A.GC..CGGCGCCGAC..................................................................CUGU.CAGCCAGGAGACCUGCCGGCACUGAAAGUGCGUGC
Burkholderia_vietnam.1 CP000615.1/1891336-1891529 UUACGCUUGCGCACCGAUGGU...UCCCGGA......................GACG........GGAUC......AAAA..GGGAA.C.GC.A.G.CAGAGGCCGAGCCUC...................CAAUCUGC.GGCUGCCC.CC.GCAACUGUAA..GC.GG..........CGAAUCCGCGCCACCACGC..........................GCCACUGG...GAAA..............................................................CCGGGAAGGC..CGGC..G.CG..GAUGACGAC...................................................................CCGC.AAGCCAGGAGACCUGCCAUCGACCCGAGGUCCAGC
Burkholderia_cenocep.2 CP000379.1/1074555-1074362 UUACCCUUGCGCGCUGAUGGU...UCCCGGA......................GACG........GGAUC......AAAA..GGGAA.C.GC.A.GGUGAGGCAACGCCUC....................GAAGCUGC.GGCUGCCC.CC.GCAACUGUGA..GC.GG..........CGAAUCCGUGCCACCGCAU..........................GCCACUGG...GAAA..............................................................CCGGGAAGGC..CCGC..A.CG..GACGACGAC...................................................................CCGC.GAGCCAGGAGACCUGCCAUCGACCCGAGGUCCAGC
Burkholderia_vietnam.2 CP000614.1/1755111-1754922 UACGGCCGUUCGUUCGCCGGU...GCCCU........................UCGG........GGCCG......AAGA..GGGAA.C.AC.A.G.GGCGCGCCGCGCC.....................G...CUGU.GGCUGCCC.CC.GCAACUGUAG..AC.AG..........CGAGCCGCGCUCCGCCACAU.........................GCCACUGGU...UUC............................................................A.CCGGGAAGGC..CGGG..A.GC..CGGCGCCGAC..................................................................CUGU.CAGCCAGGAGACCUGCCGGCCAGAAAGUGCGUGCG
Burkholderia.1 CP000151.1/1842062-1841871 UACGGCCGUUCGUUCGCCGGU...GCCCC........................UCGG........GGCCG......AAGA..GGGAA.C.AC.A.G.GGCGCGCCACGC......................GCCGCUGU.GGCUGCCC.CC.GCAACUGUAG..AC.AG..........CGAGCCGAUCUCCCCCUCAU.........................GCCACUGGU...UCC............................................................A.CCGGGAAGGC..CGGG..A.GC..CGGCGCCGAC..................................................................CUGU.CAGCCAGGAGACCUGCCGGCCUGAAAGUGCGUGCG
Burkholderia_cenocep.3 CP000958.1/1840255-1840064 UACGGCCGUUCGUUCGCCGGU...GCCCU........................UCGG........GGCCG......AAGA..GGGAA.C.AC.A.G.GGC.GCCCCCCGC.....................GCCGCUGU.GGCUGCCC.CC.GCAACUGUAG..AC.AGCG........AGCCGAGCUCCCCCUCAU...........................GCCACUGGU...UUC............................................................A.CCGGGAAGGC..CGGG..A.GC..CGGCGCCGAC..................................................................CUGU.CAGCCAGGAGACCUGCCGGCCAGAAAGUGCGUGCG
Burkholderia.2 CP000152.1/1678463-1678270 UUACCCUUGCGCGCUGAUGGU...UCCCGGA......................AACG........GGAUC......AAAA..GGGAA.C.GC.A.G.GAGAGGCAGCGCCUC...................GAAUCUGC.GGCUGCCC.CC.GCAACUGUGA..GC.GG..........CGAAUCCGUGCCACUGCAU..........................GCCACUGG...GAAA..............................................................CCGGGAAGGC..CGGC..A.CG..AAUCAGGAC...................................................................CCGC.GAGCCAGGAGACCUGCCAUCGACCCGAGGUCCAAG
Burkholderia_pseudom.1 ABBP01000344.1/210-416 AUACAGCGUCCGUCGACCGGC...GCCCC........................ACGG........GGCCC......AAGA..GGGAA.C.GC.A.G.GGCGCGCCGCGCC.....................G...CUGC.GGCUGCCC.CC.GCAACUGUGA..GC.AGC.........GAGUCCGCAUCCGAUCCAC..........................GCCACUGGCCACGCCGCCCUUUCGCGG..............................................CCG.CCGGGAAGGC..CCGC..U.GC..GGACGACGAC..................................................................CUGC.CAGCCAGGAGACCUGCCGGGACGUUUCGUUCGUGC
Ralstonia_solanacear.1 AL646053.1/765144-764965 AUCCCGCCUCACGAUGAUGGUG..CCCUU.................................CCAGGGUG......AAAC..GGGAA.C.GC.G.G.UGC...............................GAUGCCGC.GGCUGCCC.CC.GCAACUGUAA..GC.GA..........CGAGUCUGCGCCAACCA............................GCCACCGCACGAUGC...............................................................CGGGAAGGC...GGC..G.CC..AGGCGAUGAC..................................................................GCGC.GAGCCAGGAGACCGGCCAUCUCCUUCUGUCGACGU
Ralstonia_solanacear.2 AAKL01000016.1/79085-78906 AUCCCGCCUCACGAUGAUGGUG..CCCUU.................................CCAGGGUG......AAAC..GGGAA.C.GC.G.G.UGC...............................GAUGCCGC.GGCUGCCC.CC.GCAACUGUAA..GC.GA..........CGAGCCAGCGCCAACCA............................GCCACCGCACCAUGA...............................................................CGGGAAGGC...GGC..G.CC..GGGCGAUGAU..................................................................GCGC.GAGCCAGGAGACCGGCCAUCUCCUUUUGUCGACGU
Acidovorax.1 CP000539.1/3361819-3361627 UUAUCAUCCCCGUCCUCAGGUG..CCCGCUGCCGC..................AAGGC....AAAGGGAG......AAUC..GGGAA.G.GC.G.G.UUG...............................GAGUCCGC.CGCGUG.C.CC.AACGCUGUAA..GG.AA..........GAUGACCCCCGCUCAAU............................GCCACUGGCCGCCAA...........................................................GG.CCGGGAAGGC...GCG..G.CG..GGUCAGAUGA..................................................................AUCC.AAGCCAGAAGACCGGCCUGAACGUUCAUCGCGCUG
Chromobacterium_viol.1 AE016825.1/1690702-1690517 AUUCUUGCCAUUCUUGACGGUG..CCCCA.................................AAAGGGUG......AAAC..GGGAA.C.GC.G.G.UGG...............................AAUGCCGC.GGCUGCCC.CC.GCAACUGUAA..GC.GC..........AGAGUCCACGCCUGAC.............................GCCACUGGCCCUUAGCA........................................................AGG.UCGGGAAGGC...GGC..G.CC..CGGACGGCGA.................................................................CGCGC.GAGCCAGGAGACCGGCCGUCAAACGUGUCGACGCA
Nitrosomonas_eutroph.1 CP000450.1/2027042-2027265 CUCCACUCCCUUGCUUGAGGUG..UCCCAGAUGCAUU................UGCAC....GAGGGAUG......AAAC..GGGAA.G.CC.G.G.UGCGCACUGGAAUCAAACAAUGC...........AAUGCCGA.CACUGCCC.CC.GCAACGGUAA..AU.GA..........GUCAAUAUUCUGCACAC............................GCCACUGUGCCAUCC..........................................................GGC.ACGGGAAGGC..GCAG..A.AU..CAGGAAAUAA............................................................AUCUACUCAC.AAGUCCGGAGACCGGCCUGAAGCAAUAUCAUGUUA
Nitrosomonas_europae.1 AL954747.1/696804-696577 UCUGCGCCCCUUGUUUGAGGUG..UCCCAGAUGCAUU................UGCAC....GAGGGAUG......AAAC..GGGAA.G.CC.G.G.UGCGCGCUGGAAUCAGCCAGCGC...........AAUGCCGG.CACUGCCC.CC.GCAACGGUAA..AU.GAG.........UCAAUGAUCUGCACAC.............................GCCACUGUGCUGUAU..........................................................GGC.ACGGGAAGGC...GCA..G.AA..UCAGGAAAAC.......................................................ACAGCUUCCGCUCAU.AAGUCCGGAGACCGGCCUGAAGCAAUAUCAUGUUA
Aromatoleum_aromatic.1 CR555306.1/2373817-2374002 AGUAUUUAACCGUAUCGAGGUG..CCCGC........................GCUCG....CGCGGGAG......AAUC..GGGAA.G.GC.G.G.UGC...............................GAUUCCGC.CACGUG.C.CC.AGCGCCGUGA..UG.AG..........GAUCGUCCGGGCAGGCGUCA.........................GCCACUGGC..GAAA............................................................G.CCGGGAAGGC...GCC..C.GG..ACGAGUCGAG..................................................................C.CU.CAGUCGGAAGACCGGCCUCGAGACAUAUUGGCAGC
Azoarcus.1 AM406670.1/3903431-3903207 AAGGUGCGGCGCGUUUCAGGUG..CCCGAAGGCGGUCC...............UCGCC....CCAGGGUU......AAAC..GGGAA.A.CA.G.G.UGCGCGCCUCCGGCGC..................AAUGCCUG.UGCUGCCC.CC.GCAACGGUAA..GC.GAGU........GCAAGGCGCAUCAACA.............................GCCACUGGG..UCGU..........................................................C.C.CCGGGAAGGC...GAU..G.CG..UCGGAGCCGG..................................................CCACAGCCGCUCCAGCCCGC.GAGCCCGGAUACCGGCCCGAGCGCGAACUGGCGGA
Azoarcus.2 AM406670.1/2635166-2635365 AAACUCCCCGGCGUUGAAGGU...UCCCCGC......................CAGG........GGAUU......AAAA..GGGAA.G.CC.G.G.UGCCGAGCCCAGCUCG..................AAUUCCGG.CGCUGCCC.CC.GCAACUGUCA..UC.GGC.........GAGCGCUUCGCCACCCCAU..........................GCCACUGGA..UGCG..........................................................U.U.CCGGGAAGGC..GGGC..G.AA..GCGCGACGAC..................................................................CCGA.GAGCCAGGAGACCUGCCCCAACGUCCAUCCUUGAA
D.aromatica.1 CP000089.1/155783-155587 CCGGCCUUUAUGUCUCUCGGUG..CCCGGCCGAU...................UUAUC....GGCGGGAG......AAUC..GGGAA.G.GC.G.G.UGC...............................AAAUCCGC.CGCGUG.C.CC.AACGCUGUAA..GG.AG..........GACGGGCGAUGCGAAAA............................GCCACUGGUCAGGGAAAACC.....................................................CGG.CCGGGAAGGC...GCA..U.CG..GCCGGGUGA...................................................................AUCC.GAGUCAGAAGACCGGCCGGGAGACGAAACCGGGCU
delta_proteobacteriu.1 AAQF01000040.1/17254-17069 UUGGGCGAUUGCCGACCUGGU...CGCGG...........................GC....CUGGGGAG......AAUA..GGAAA.U.CG.G.G.UGU...............................AAAUCCCG.AGCGGU.C.CC.GCCGCUGUGA..AC.GGG.........GAGUGAUUCCGGUAAAU............................GCCACUGGCCGCCAGG.........................................................CGG.CCGGGAAGGC...CCG..G.AA..AAACGAUGAG..................................................................CCGU.GAGCCAGAAGGCCUGCCCCUUGGUUAGCCGCCGCC
delta_proteobacteriu.2 AAQF01000153.1/10735-10925 CCAAGUUGGGCGAUUGCCGGC...CUGGUCG......................CGGGC....CCGGGGAG......AAUA..GGAAA.U.CG.G.G.UGU...............................AAAUCCCG.AGCGGU.C.CC.GCCGCUGUGA..AC.GGG.........GAGUGAUUCCGGUAAAU............................GCCACUGGCCGCCAGG.........................................................CGG.CCGGGAAGGC...CCG..G.AA..AAGCGAUGAG..................................................................CCGU.GAGCCAGAAGGCCUGCCCCCUGGUUAGCCGCCGCA
Desulfuromonas_aceto.1 AAEW02000019.1/41610-41805 GACGUCAUAUUGGAUCACGGU...GCCCAACGGGAGCUUAAAUG.........UCUCG....UGAGGCUU......GAUA..GGGAA.GAGG.G.G.UGC...............................AACUCCCC.CGCGGA.C.CC.GCCGCUGUAA..AC.G...........UGGACAACAGGCUCCAU............................GCCACUGGU...UUC..........................................................G.A.CCGGGAAGGC...GCC..U.GA..AGGAUGAAG....................................................................CGU.AAGCCAGAAGACCUGCCUGAUCCCAACACUCAAUG
Desulfuromonas_aceto.2 AAEW02000025.1/17075-16893 UCUGCGCUGAAAGUUUCAGGU...GCUUGUU......................GCA.........AGCAC......AAUA..GGGAA.U.UC.C.G.UGA...............................AAUUCGGG.AGUGGG.C.CC.GCCGCUGUAA..CC.AG..........GGACGAUCAACACAUUUG...........................GCCACUGACU..UAG...........................................................AG.UCGGGAAGGC..GUGU..U.GA..GACGGAAGAU..................................................................CUGG.AAGCCAGAAGACCUGCCUGAAACGCAAUGGUUGCA
Geobacter_uraniiredu.1 CP000698.1/4850452-4850264 UAAAUAGUUAUUCGAUCUGGUG..CGCUCAC......................UAACA....AGAGCGUU......AAAA..GGGAA.G.GA.G.G.UGU...............................AAUUCCUC.CACUGU.C.CC.GCAACUGUGA..AC.GG..........UGAUGAAAGCCGCUGAUGU..........................GCCACUGAAU....A..........................................................UAA.UCGGGAAGGC..GCGG..C.AA..GUAAAGUGAC..................................................................CCGU.AAGUCAGGAAACCUGCCAGGCUGAUUGCUCAAUGG
G.lovleyi.1 CP001090.1/13752-13558 CAAAAUAAAUCAAAUCACGGU...GCCCA........................UAGG........GGCUU......GAUA..GGGAA.GAGG.G.G.UGCAUUUCCAUUUGGAAA................GAGUCCCC.CGCGGA.C.CC.GCCGCUGUAA..GC.GA..........GGACAAAGGGCAAUAAU............................GUCACUGAUC.AUUA...........................................................GA.UUGGGAAGAC....GC..C.CG..GAGGAUGAA...................................................................UCGC.AAGCCAGAAGACCUGCCGAUGAUCUCAACACUCAA
G.lovleyi.2 CP001090.1/1002-822 GCAGAAUAUACGAUCAACGGU...GCCCA........................UACG........GGCUU......GAUA..GGGAA.GUGA.G.G.UGA...............................AACUCCUC.CACGGA.C.CC.GCCGCUGUAA..GC.GA..........UGACAAAGGGCAACAAU............................GUCACUGAUCAAUUU...........................................................GA.UCGGGAAGAC....GC..C.CG..GAGGAUGAU...................................................................UCGC.AAGUCAGAAGACCUGCCUUGAUCUUACAUCAUGAA
Geobacter_uraniiredu.2 CP000698.1/931897-931705 AACUGAAUAUCGGAUCACGGU...GCCCG........................CAAG........GGCUU......GAUA..GGGAA.GAGG.G.G.UGCCGCUCAAACCGAGC.................CAUUCCCC.CGCGGA.C.CC.GCCGCUGUAA..GC.GA..........GGACGA.AGGGCAUUAU............................GUCACUGGUC.GAAA...........................................................GA.CCGGGAAGGC...GCC..C.....GGAGGAUGAA..................................................................UCGC.GAGCCAGAAGACCUGCCAUGAUCUUAGCACUCAAC
G.lovleyi.3 CP001090.1/30663-30471 UGAAUAUGCACGAAUCACGGUG..CCCGC..................................AAGGGUG......AAAA..GGGAA.GAGG.G.G.UGACGCUCUGACGAGC..................UAUUCCCC.CGCGGA.C.CC.GCCGCUGUAA..GC.GA..........UGACGA.AGGGCAACAAC...........................GUCACUGAUCAUUUA...........................................................GA.UUGGGAAGAC...GCC..C.....GGAGGAUGAC..................................................................UCGC.AAGUCAGAAGACCUGCCGCUGAUUGUUGUUACUCG
Pelobacter_propionic.1 CP000482.1/1280913-1280737 ACACUCAUACCGGAUCAGGGC...GCCCG........................ACAG........GGCUU......GAUA..GGGAA.GAGG.G.G.UGC...............................GACUCCCC.CGCGGA.C.CC.GCCGCUGUAA..GC.GA..........UGACAA.GGGGCAACG.............................GCCACUGGU..UUUU..........................................................G.A.CUGGGAAGGC...GCC..C.....GGAGGAUGAA..................................................................UCGC.GAGCCAGAAGACCUGCCACUGAUCCACGCCACUCA
Pelobacter_propionic.2 CP000482.1/1312853-1313047 AAUUGAAUAUCUGAUCAAGGU...GCCCG........................AGAG........GGCUU......GAUA..GGGAA.GAGG.G.G.UGCCGCUCUCAGUAACGAGC..............CAUUCCCC.CGCGGA.C.CC.GCCGCUGUAA..GC.GA..........UGACGA.AGGGCAGUAU............................GCCACUGGU..GAAU..........................................................A.A.CCGGGAAGGC...GCC..C.....GGAGGAUGAC..................................................................UCGC.GAGCCAGAAGACCUGCCUUUUGAUUAUUGCCACAG
Pelobacter_propionic.3 CP000482.1/1300492-1300303 AGUUGAAUACCGGAUCAAGGC...GCCCG........................AGAG........GGCUU......GAUA..GGGAA.GAGG.G.G.UGAGCUCCGAAGAGC...................GAUUCCCC.CGCGGA.C.CC.GCCGCUGUAA..GC.GA..........UGACAA.AGGGCAACA.............................GCCACUGGUU.UUUU...........................................................GA.CUGGGAAGGC...GCC..C.....GGAGGAUGAC..................................................................UCGC.AAGCCAGAAGACCUGCCUGAUCUCUGCACUCAAUA
Pelobacter_propionic.4 CP000482.1/1298216-1298027 AGUUUCAUACCGGAUCACGGU...GCCCG........................CAAG........GGCUU......GAUA..GGGAA.GAUG.G.G.UGAGCUCCAAAGAGC...................GAUUCCCC.CGCGGA.C.CC.GCCGCUGUAA..GC.GA..........UGACGA.AGGGCACACC............................GCCACUGGU..UUUU..........................................................G.A.CUGGGAAGGC...GCC..C.....GGAGAAUGAC..................................................................UCGC.GAGCCAGAAAACCUGCCUGAUCCCAAACACUCGGA
Pelobacter_propionic.5 CP000482.1/1351280-1351088 AGCAUCAUAUCGGAUCACGGU...GCCCG........................CAAG........GGCUU......GAUA..GGGAA.GAGG.G.G.UGCAACUCUUAUACGAGC................CAUUCCCC.CGCGGA.C.CC.GCCGCUGUAA..GC.GA..........UGACGA.AGGGCAGUAU............................GCCACUGGU..GAAC..........................................................A.A.CCGGGAAGGC...GCC..C.....GGAGGAUGAC..................................................................UCGC.AAGCCAGAAGACCUGCCUGAUCUUUACCACUGACU
Stigmatella_aurantia.1 AAMD01000084.1/10237-10455 UAUCCCCGGCCUGUCCUCGGCG..CGUCCAU......................GAAGUCA..UGGACGCU......CA.A..GGGAA.C.CC.G.G.UGU...............................GAUUCCGG.GACUGC.C.CC.GCAGCGGUGA..AC.AGGA........ACGACCGCCGUCCACGCA...........................AGCACUGGCCCCUCCCG........................................................GGG.CUGGGAAGC....GAC..A.GC..CAGUAGAAGG..........................................AGGAUUCCCCCGAACCCUCCGCGCCUGU.GAGUCCGAAGACCUGCCGAGGUCCCGUGCCCCGCA
Stigmatella_aurantia.2 AAMD01000003.1/111144-110935 AUGAGAUGUGCUUCGGCACGU...UCUUGAU......................GACGC....AGUAGUCUU.....AAAA..GGGAA.C.CC.G.G.UGU...............................GAAUCCGG.GGCUGC.C.CC.GCAGCGGUAA..GC.GAGA........ACGACCUCCACGACGA..............................GCACUGGUCCCUUCCG........................................................GGA.CUGGGAAGC....GGU..G.GA..CAGUAGGAAC...............................................CCGGCGCAAGCCGGAGUGCUCGU.GAGCCCGAAGACCUGCCCGCACCUGACGUUGGAGA
Stigmatella_aurantia.3 AAMD01000003.1/140975-140765 UAUAGACGCGCCUGUGCUGGU...GUCUGGGCU....................CACGC....CUGGACUU......AAAA..GGGAA.C.CC.G.G.UGU...............................GAUUCCGG.GACUGC.C.CC.GCAGCGGUAA..GU.GAGA........ACGAAUCUCGCCAUUG..............................GCACUGGCUCCUCGG.........................................................GGG.CUGGGAAGC....GGC..G.AG..CCGUAGGAAU..............................................CCGGCCCUGGGCCGGAGCGCUCAC.GAGUCCGAAGACCUGCCCGCAUCCACCCGUGGGGA
Myxococcus_xanthus_D.1 CP000113.1/8100727-8100515 AUCCCCGCUCGCGUCCUCGGUG..UCGCCGU......................GGAGCCA..CGGUGACU......CA.A..GGGAA.C.CC.G.G.UGU...............................GAAUCCGG.GACUGC.C.CC.GCAGCGGUGA..GC.AGGA........ACGAACGCCGUCACGUGA...........................AGCACUGGCCCGAAGC.........................................................GGG.CUGGGAAGC....GAC..G.GC..AAGUAGGUGG...............................................GUGCUCCGUGCACCCGCGCCUGC.GAGUCCGAAAACCUGCCGAAGACCCGUGCCCUUGG
Plesiocystis_pacific.1 ABCS01000025.1/79736-79534 UAUGAGCGGAGGGCCGAUGGUC..CCGCG........................CGUG........CGGGC......CCGA..GGGAA.U.CC.G.G.UGG...............................AAAUCCGG.AGCUGC.C.CC.GCAGCGGUGA..GC.GGG.........AACGAAAGCUGCAUCGAA...........................GGCACUAGGC..CAC...........................................................GC.CCGGGAAGCC...GCA..G.CG..AGUAGGUCAC..............................................CGGGGUCUCGACCCCGUCGCCCGC.GAGUCCGAAGACCUGCCGUCGGUGUUGUCCGUCAC
Plesiocystis_pacific.2 ABCS01000001.1/110390-110179 AUAUGUUGUGCCCGCGAAGGU...GCUCGAC......................CCCGG....UCGGGCCC......GAGA..GGGAA.U.CC.G.G.UGA...............................GAAUCCGG.AGCUGC.C.CC.GCAGCGGUAA..GC.GAG.........AACGACCGCCACAUCAGA...........................GGCACUGGGACGCCC..........................................................GUC.CUGGGAAGCC...GUG..G.CC..AGUAGGUUGG.............................................ACCGACGUCGAGGUCCAGCGCUCGC.AAGUCCGAAUACCUGCCUUCGCCCGGCGCCGGGAG
Enterobacter.1 CP000653.1/4368932-4368756 UUGUAGCAUUCUGUUUCCGGU...CUCAU..................................GUAAGUG......AAAA..GGGAA.U.CC.A.G.UGC...............................AAAUCUGG.AGCUGA.C.GC.GCAGCGGUAA..AG.AC..........UGGCGGGAUGAGAGUUGUA..........................GACACUGU...GAAA..............................................................AUGGGAAGUC...UUC..A.UC..CGUAAAACGC..................................................................CACU.AAGCCCGAAGACCUGCCGGAAUUACGUCGCAUCUG
E.coli.1 AJ278144.1/22351-22163 CAGUAAUAUCCAGUUGUCGGU...CCUGC....................................GAGUU......AAUA..GGGAA.U.CC.A.G.UGC...............................AAAUCCGA.AACUGA.C.AC.GCAGCGGUAA..GG.AA..........AGGUGCGAUGAUUGCGUAAUGUG......................GACACGGUC..AUCC............................................................G.GUGGGUGGUC...AUC..U.CU..UUGUAUCUUC..........................................................AGAUGCCCUUCU.AGGUCUGAAGACCUGUCGGUUAACGUCGCAUCUGG
E.coli.2 M10112.1/56-247 CUGUAGCAUCCACUUGCCGGU...CCUGU....................................GAGUU......AAUA..GGGAA.U.CC.A.G.UGC...............................GAAUCUGG.AGCUGA.C.GC.GCAGCGGUAA..GG.AA..........AGGUGCGAUGAUUGCGUUAUGCG......................GACACU..CGCCAUU...........................................................CG.GUGGGAAGUC...AUC..A.UC..UCUUAGUAUC........................................................UUAGAUACCCCUCC.AAGCCCGAAGACCUGCCGGCCAACGUCGCAUCUGG
Klebsiella_pneumonia.1 CP000647.1/3513278-3513100 CGGCGAAACAAACCGACAGGUU..CGACACC......................AGU.........UUGGU......GUCA..GGGAA.G.GG.G.G.UGU...............................AAAUCCCC.CGCAGCCC.CC.GCUGCUGUGA..UG.C...........UGACGACCCCGCAAAAA.............................CCACUGAUC.GAAA...........................................................GA.UUGGGAAGG....GCG..G.GC..GAGAACGAG....................................................................GCU.AAGCCAGAAGACCUGCCUGCCGGUAACUGACCAAC
Klebsiella_pneumonia.2 CP000647.1/4660061-4660248 UUGUAGCAUUCGCCUACCGGU...CCUGU....................................GAGUU......AAAA..GGGAA.C.CC.A.G.UGG...............................AAAUCUGG.GGCUGA.C.GC.GCAGCGGUAA..GG.AA...........GGUGAGAAAUGAGCGCACUCGGUGCA..................GACACUGCGG..CUA..........................................................GCC.GUGGGAAGUC.AUUAU..U.UC..UUGAAACAGC..................................................................CUCC.AAGCCCGAAGACCUGCCGGAAUACGUCGCACUGGG
Photorhabdus_lumines.1 BX571869.1/30799-30632 UUAAUACCACACCUUAAUGGU...............................................GU......GGUU..GGGAA.G.GA.G.G.UGA...............................AAGUCCUC.CGCAGCCC.CC.GCUGCUGUGA..UG.CU..........GACAACUCCGCUGAU..............................GCCACUGGUCGGAAA...........................................................GA.CUGGGAAGGU...UGC..G.GG..GAAGGGUGA...................................................................CGCU.AAGCCAGAAGACCGACCUGACAGGCACGAGACAUU
Salmonella_enterica_.1 CP000880.1/3464662-3464469 CGGUAGCAUCCGUGGGCCGGU...CCUGU....................................GAGUU......AAUA..GGGAA.U.CC.A.G.UGA...............................AAAUCUGG.AGCUGA.C.GC.GCAGCGGUAA..GG.AA..........AGGUGAGAUGAGAGCGUAAGCA.......................GACACUGCC...UCC............................................................G.GCGGGAAGUC...AUC..A.UU..UCUGCUAUCC...................................................AGCCAACGGAUAACCCUCC.AAGCCCGAAGACCUGCCGGCUAACGUCGCAUCUGG
S.enterica.1 AL627279.1/139350-139157 CGGUAGCAUCCGUGGGCCGGU...CCUGU....................................GAGUU......AAUA..GGGAA.U.CC.A.G.UGA...............................AAAUCUGG.AGCUGA.C.GC.GCAGCGGUAA..GG.AA..........AGGUGAGAUGAGAGCGUAAGCA.......................GACACUGCC...UCC............................................................G.GCGGGAAGUC...AUC..A.UU..UCUGCUAUCC...................................................AGUCAACGGAUAACCCUCC.AAGCCCGAAGACCUGCCGGCUAACGUCGCAUCUGG
S.enterica.2 M57569.1/218-26 CGGUAGCAUCCGUGGGCCGGU...CCUGU....................................GAGUU......AAUA..GGGAA.U.CC.A.G.UGA...............................AAAUCUGG.AGCUGA.C.GC.GCAGCGGUAA..GG.AA..........AGGUGAGAUGAGAGCGUAAGCA.......................GACACCUGUC...............................................................CGG.C.GGGAAGUC...AUC..A.UU..UCUGCUAUCC...................................................AGCCAACGGAUAACCCUCC.AAGCCCGAAGACCUGCCGGCUAACGUCGCAUCUGG
S.enterica.3 L12006.1/1016-1191 CCAUAACGUAAACCAACAGGUUU.GCCACAU......................UUGU........GGU...........A..GGGAA.G.GG.G.G.UGA...............................AAAUCCCC.CGCAGCCC.CC.GCUGCUGUGA..UG.C...........UGACGACCCCGUAAAGA.............................CCACUGAUC.GCAA...........................................................GA.UUGGGAAGG....ACG..G.GC..GAGGAGGAC....................................................................GCU.AAGCCAGAAGACCUGCCUGUCGGUGAUAACCAACA
S.enterica.4 M89481.1/311-504 CGGUAGCAUCCGUGGGCCGGU...CCUGU....................................GAGUU......AAUA..GGGAA.U.CC.A.G.UGA...............................AAAUCUGG.AGCUGA.C.GC.GCAGCGGUAA..GG.AA..........AGGUGAGAUGAGAGCGUAAGCA.......................GAAACUGCC...UCC............................................................G.GCGGGAAGUC...AUC..A.UU..UCUGCUAUCC...................................................AGCCAACGGAUAACCCUCC.AAGCCCGAAGACCUGCCGGCUAACGUCGCAUCUGG
Shigella_sonnei_Ss04.1 CP000038.1/2154731-2154556 UCAUAACAUACGCUGACAGGUGU.GGCACAU......................UUGU........GCC...........U..GGGAA.G.AG.G.G.UGA...............................AAAUCCCU.CGCAGCCC.CC.GCUGCUGUAA..UG.C............UGACAAACCCGAAAAU............................GCCACUGAUC.GCGA...........................................................GA.UUGGGAAGGU...CGG..G.UG..AGGAUGAC.....................................................................GCU.AAGCCAGAAGACCAGUCUGUCAGUCAAUACCAACA
Shigella_boydii_Sb22.1 CP000036.1/1206778-1206953 UCAUAACAUACGCUGACAGGUGU.GGCACAU......................UUGU........GCC...........U..GGGAA.G.AG.A.G.UGA...............................AAAUCCCU.CGCAGCCC.CC.GCUGCUGUAA..UG.C............UGACAAACCCGAAAAU............................GCCACUGAUC.GCGA...........................................................GA.UUGGGAAGGU...CGG..G.....AGAGGAUGAC...................................................................GCU.AAGCCAGAAGACCAGCCAGUCAGUCAAUACCAACA
Shigella_boydii_CDC_.1 CP001063.1/4163721-4163911 CUGUAGCAUCCACUUGCCGGU...CCUGU....................................GAGUU......AAUA..GGGAA.U.CC.A.G.UGC...............................GAAUCUGG.AGCUGA.C.GC.GCAGCGGUAA..GG.AA..........AGGUGCGAUGAUUGCGUUAUGCG......................GACACUGCC..AUCC............................................................G.GUGGGAAGUC...AUC..A.UC..UCUUAGUAUC........................................................UUAGAUACCCCUCC.AAGCCCGAAGACCUGCCGGCCAACGUCUCAUCAUC
Yersinia_bercovieri_.1 AALC02000021.1/24189-24004 UUUUUUAUAUAUCGAAAUGGUC..AUGUUAU......................GCGCAA...AAGCAU........AACU..GGGAA.G.GG.G.G.UGA...............................CAAUCCCC.CGCAGCCC.CC.GCUGCUGUGA..UG.CU..........GACGAACCCGCUGUU..............................ACCACUGAUCCAUCG...........................................................GA.UUGGGAAGGU...UGC..G.GG..UGAGAGUGA...................................................................CGCU.AAGCCAGAAGACCAGCCAGAUCGGUAAAAGAUAUU
Yersinia_enterocolit.1 AM286415.1/2962117-2961936 UACUUAAAUACUGAAACAGGUA..UGUCGUG......................GAUA........ACACG......AU.U..GGGAA.G.GG.G.G.UGU...............................AAAUCCCC.CGCAGCCC.CC.GCUGCUGUGA..UG.CU..........GACGAACCCGCUGAG..............................ACCACUGAUCCAUAG...........................................................GA.UUGGGAAGGU...AGC..G.GG..GGAGAGUGA...................................................................CGCU.AAGCCAGAAGACCAGCCAAAUCAGUAAAGAGUUUC
Yersinia_mollaretii_.1 AALD02000002.1/89872-89688 AUUUGUAGUUACUGAUAGGGUC..AUGUUAU......................GCGCUA...AAGCAU........AACU..GGGAA.G.GG.G.G.UGA...............................CAAUCCCC.CGCAGCCC.CC.GCUGCUGUGA..UG.C...........UGACGAACCCGCUGUU.............................ACCACUGAUCCAUCG...........................................................GA.UUGGGAAGGU...GCG..G.GG..GAGAAUGAC....................................................................GCU.AAGCCAGAAGACCAGCCAGAUCGGUAAAAGAUAUU
Yersinia_intermedia_.1 AALF02000008.1/20807-20994 UUACUGAAAUGGUUAUGUCGU...GUACGCAUUG...................GCACU....UAAUACAC......GACA..GGGAA.G.GG.G.G.UGA...............................CAAUCCCC.CGCAGCCC.CC.GCUGCUGUGA..UG.C...........CGACGAACCCGCUGAA.............................ACCACUGAUCCAUCG...........................................................GA.UUGGGAAGGU...GCG..G.GG..GAGGAUGAC....................................................................GCU.AAGCCAGAAGACCAGCCAAAUCGGUAAAAUAUAUU
Yersinia_frederiksen.1 AALE02000017.1/13768-13947 CUUCAAGAAUAAAAGGCAUGUU..AUGCACU......................AAAG........CAU........AACU..GGGAA.G.GG.G.G.UGA...............................CAAUCCCC.CGCAGCCC.CC.GCUGCUGUGA..UG.C...........UGACGAACCCGUAGAA.............................ACCACUGAUCCACAA...........................................................GA.UUGGGAAGGU...GCG..G.GA..GAGGAUGAC....................................................................GCU.AAGCCAGAAGACCAGCCCGCUCAGUAAAAGAUUUU
Acinetobacter_bauman.1 CP000521.1/3325202-3325408 UGCGUUCAAAUGGAAGCAAGU...GUAAGCA......................AUUGA....UGCUUU...........A..GGGAA.G.CU.G.G.UGA...............................AAGUCCGG.CACUGCCC.CC.GCAACGGUAA..CA.AUG.........UAAAGCAUAUUUUUAAGUCGAAAUCGACUUAC.............ACCACUGCA...GUA..........................................................G.U.GUGGGAAGGU...GAA..U.AU..GUCCAUAAAU........................................................GAAUUAUGGCGCUG.AAGUCCGGAGACCUACUUGUUUCAUCUAUCUACCC
A.calcoaceticus.1 M34485.1/360-150 UUUACACAAUUCGUAACAAGUU..AAAAGCA......................UUCG.......CUUU...........A..GGGAA.A.CU.G.G.UGC...............................AAAUCCAG.UGCUGCCC.CC.GCAACGGUAA..AA.AU..........GUAAACCAUAUUAAAAAAGUCAUUUAGACUUAC............GCCACUGCAUGCAUA..........................................................GAU.GUGGGAAGGU..GAAU..A.UG..CUUGUCUCUU.......................................................UUUGAGAUGCCAUUU.GAGUCCGGAGACCUGCUUGUUACAUCUAUCCACUC
A.vinelandii.1 CP001157.1/3390006-3389785 CCUGCGCGCCUCGCUUCAGGUG..CCCCAA...................................GGGUG......AAACA.GGGAA.G.CC.G.G.UGCGUGCCGCGACCAUUCGCGGCGC.........AAGGCCGG.CGCUGCCC.CC.GCAACGGUAG..AC.GAG.........UCGCGAAACCGCAAUA.............................GCCACUGUGUUGCUCG.........................................................GAC.ACGGGAAGGC...GCG..G.UU..UCGGAAGCCG..................................................CCGCAUGGCGCUUCGCUCGU.GAGCCCGGAGACCGGCCUGUGGCGAUCCAUGGCGG
Pseudomonas_putida_K.1 AE015451.1/3857543-3857766 CCUUAUGCCUCGCGUUCAGGUG..CCCCU........................CAGG........GGGUG......AAAC..GGGAA.A.CC.G.G.UGCGUCCCAGGCCCUUCAGCAGGGCCGGAC....AAUGCCGG.UGCUGCCC.CC.GCAACGGUAA..GC.GA............GUGAAGCGUCUGU..............................ACCACUGUGCCUCGUAGUAC.....................................................GGC.AUGGGAAGGU...GAC..G.CG..UUCCAGGAGC.......................................................CCAGCUCUUCCUCGC.AAGCCCGGAGACCGGCCUGGCGUUCAUGAACACCC
Pseudomonas_stutzeri.1 CP000304.1/1397689-1397909 AACCUCCGCGUCGCCUCAGGUG..CCCCCUGGCCUUG................UGCCA....GACGGGUG......AAACA.GGGAA.G.CC.G.G.UCCAUUCUCACGAA....................GAUUCCGG.CGCUGCCC.CC.GCAACGGUAG..GC.GAG.........UCGAGAAACCGCAACG.............................GCCACUGUGCAUGAC...........................................................GC.AUGGGAAGGC...GCG..G.UU..UCGGGAUGCC.....................................................GCAAGGCAUACGCUCGC.AAGCCCGGAGACCGGCCUGUCGCAUUUCACUGACA
Pseudomonas_entomoph.1 CT573326.1/1440491-1440711 CCUUCGCGGCGUGUUUCAGGUG..CCCUGUGAACCCAG...............GUUCG....GCAGGGUG......AAACU.GGGAA.G.CC.G.G.UGGGCGCCAGCAAGGUGC................GAUUCCGG.CGCUGCCC.CC.GCAACGGUAG..AU.GA..........GUCGACGGCUGCGCAAG............................GCCACUGGAUUUCGU..........................................................GAU.CCGGGAAGGC...GCACGG.CC..CGGGCAUGGC.............................................................CCCACUCAU.GAGCCCGGAGACCGGCCUGUCACUGCCAACGGCAU
Pseudomonas_putida_F.1 CP000712.1/3685877-3686075 UCUACCAUGCGGGCCGCCGGU...UUCCACC......................ACG.........GAACU......AACA..GGGAA.U.CC.C.A.GGCCUGCCAAUACGGGCC................AAAC..GG.AACUGCCC.CC.GCAACUGUAG..GU.GC..........CGAGCCUGCUCCAUCGAU...........................GCCACUGGGCCUGCC...........................................................GC.CCGGGAAGGC..CGGA..G.CC..GGGCCGUGAC..................................................................GCAC.CAGUCAGGAGACCUGCCGGCCUACAUUCACCAACC
P.mendocina.1 CP000680.1/4136427-4136223 AGUAAGGUUGCCGCCGAUGGU...UCCGCCGCCUC..................UGGCG....CGCGGAUG......AAAA..GGGAA.C.AG.G.G.UGCGGCGCCGCGUCGCC.................AAUGCCCU.GGCUGCCC.CC.GCAACUGUAA..AC.GG..........CGUACGACGCUCCCUAU............................GCCACUGGCC.GCCA...........................................................GG.CCGGGAAGGC...GAG..C.GA..AGUGGCAAG...................................................................CCGU.GAGCCAGGAGACCUGCCAUCGGCAAACGGGCGUUU
Pseudomonas_fluoresc.1 CP000076.1/2504928-2504724 AUAUGCCGCCCAGUUUCAGGUG..CCUCCUGCCGC..................CGUGC....AGGAGGUG......AAAC..GGGAA.A.CC.G.G.UGCGCCCCUUUUCGGGC.................AAGUCCGG.UGCUGCCC.CC.GCAACGGUAA..GC.GA...........GUGCUGCAUUCAACAG............................GCCACUGUACCCAAG...........................................................GU.AUGGGAAGGC...GAA..U.GC..CGCCAGAC....................................................................UCGC.AAGCCCGGAGACCGGCCUGUGACGUCUGUUUGGCA
Pseudomonas_fluoresc.2 CP000076.1/4227691-4227479 GUAGCCUUGCGCUUUCGAGGUU..CUUCGGCC.....................ACGGG....UCGAAGCU......AAGAA.GGGAA.C.GC.G.G.U.C...............................GAUGCCGC.GGCUGCCC.CC.GCAACUGUGA..AG.GG..........UUCGAUUGCUGCAAG..............................GCCACUGCAUGGGCGUCGACGACG.................................................CCG.GUGGGAAGGC...GCA..G.CA..AUCGCCGGUC....................................................CGACGACUGGCAAGCCCU.CAGCCAGGAGACCUGCCUCGAUCCCAGAUUCUCAC
Pseudomonas_syringae.1 AE016853.1/3679925-3680123 UUUACCAUGCCGGCCGUCGGU...UUCCG........................AGAG........GAACU......AACA..GGGAA.U.UC.G....CCAGCUUUGUUUCAAAGGCC.............AAAA.CGA.AACUGCCC.CC.GCAACUGUAG..GC.AU..........CGAGCCUGCUCCAAGACU...........................GCCACUGGAU..UCA..........................................................GAU.CCGGGAAGGC..CGGA..G.CA..UGGUGAUGAC..................................................................AUGC.CAGUCAGGAGACCUGCCGACCCGAUUCAACCAACU
Pseudomonas_aerugino.1 AAQW01000001.1/3968828-3969033 CCCAUCCGGCCCGUUCCAGGUG..CCUCCUGCCGC..................CGCGC....AGGAGGUG......AAAC..GGGAA.G.CC.G.G.UGCGUCACUUCGGUGAU.................CAGUCCGG.CGCUGCCC.CC.GCAACGGUAA..GC.GA...........GCGAAAUCCUCUUCAG............................GCCACUGUGC..UCC..........................................................GGC.AUGGGAAGGC...GAG..G.AU..UUCACGACCC..................................................................UCGC.AAGCCCGGAGACCGGCCUGCAACGCCCUGUUGGCA
Pseudomonas_syringae.2 AE016853.1/1878136-1878350 CCUUCGCGGCUUGUUUCAGGUG..CUCUGCAAUCCUC................GAUUG....GCAGGGUG......AAACA.GGGAA.G.CC.G.G.UGUGGAUCGACCGAUCC.................GAUCCCGG.CGCUGCCC.CC.GCAACGGUAA..AU.GAG.........UCAAGGCUGUGCAUCGU............................GCCACUGUGU..UUC..........................................................GAC.ACGGGAAGGC...GCG..C.AG..CCGGGGUAAC..............................................................CCGCUCAU.GAGCCCGGAGACCGGCCUGAACCACUCAAUGGCAU
Pseudomonas_aerugino.2 AAQW01000001.1/1951627-1951835 GCUGCGCGCCUUGCGACAGGUG..CCCCG........................CAAG........GGGUG......AAACA.GGGAA.G.CU.G.G.UGCGUUCCGUCGGAAC..................CAGGCCAG.CGCUGCCC.CC.GCAACGGUAG..GC.GAA.........UCAGACAGCCGCUCGAUG...........................ACCACUGUGC..UCC..........................................................GGC.AUGGGAAGGC...GCG..G.CU..GGAAGCGUCC........................................................AGCGCUUCGCUCGC.GAGCCCGGAGACCGGCCUGACGCACCCACGGCAUC
Pseudomonas_fluoresc.3 CP000094.2/3552647-3552437 GUAGCCUUGCGCUUUCGAGGUU..CUUCGGC......................CCACG....CCGAAGCU......AAGAA.GGGAA.C.GC.G.G.UCC................................AAGCCGC.GGCUGCCC.CC.GCAACUGUGA..AC.GGU.........GCUGUUCGCUGCCAC..............................GCCACUGCCAACUCAAUCCAGAG..................................................CCA.GCGGGAAGGC...GCA..G.CG..AAUACCGGGC.....................................................CAAGGCCCGAACACCGU.CAGCCAGGAGACCUGCCUCGUCACAGAUUCUCACU
Pseudomonas_putida_K.2 AE015451.1/1866934-1867155 CCUUCGCGGCGUGUUUCAGGUG..CCCUGCCAGCCCCG...............ACUGG....GCAGGGUG......AAACU.GGGAA.G.CC.G.G.UGGGCGCCAGCAUGGCGC................GAUUCCGG.CGCUGCCC.CC.GCAACGGUGG..AU.GAGU........AAAAGGCCGCGCAGG..............................GCCACUGGAUGCCAG..........................................................CAU.CCGGGAAGGC...GCG..C.AG..GCCAGGGCCA..........................................................AGGCCCACUCAC.AAGCCCGGAGACCGGCCUGAUACUGCCAACGGCAU
P.mendocina.2 CP000680.1/5037130-5036935 UAGCCUUCUCGCUUUCGAGGUU..CUUCCCGGCAAG.................CCGCC....GGGGAGCU......AAGA..GGGAA.C.AG.G.G.U.C...............................GAUGCCCU.GGCUGCCC.CC.GCAACUGUAA..AC.GGU.........CGCAACUCCUUCGAUAC............................ACCACUGCCU...............................................................CAA.GCGGGAAGGU...GAA..G.GA..CGCACAGCGU.............................................................GCAGACCGU.GAGCCAGGAGACCUGCCUCGAUAGACCAGCCACUU
Pseudomonas_entomoph.2 CT573326.1/2524145-2524344 GUAGCCUUGCCGCUUCGAGGUU..CUCCGGC......................GUUGG....CCGGAGCU......AAGAC.GGGAA.C.GC.G.G.U.C...............................GAUGCCGC.GGCUGCCC.CC.GCAACUGUAG..GC.AC..........UGGAACGGAUCGGCACA............................GCCACUGCGC....A..........................................................CGC.GCGGGAAGGC..GCCA..U.CC..CGCUGGCAAU......................................................GCUGCCGGCACAGUGC.GAGCCAGGAGACCUGCCUCGUGACGUUUUCGACUU
Pseudomonas_putida_W.1 CP000949.1/2158518-2158320 UCUACCAUGCGGGCCGCCGGU...UUCCACC......................ACG.........GAAAU......AAUA..GGGAA.U.CC.C.A.GGCCGCCCAGGCGCGCC.................AAAC..GG.AACUGCCC.CC.GCAACUGUAA..GU.GC..........CGAGCCCGCUCCAUCGAU...........................GCCACUGGAUCAGCC..........................................................GAU.CCGGGAAGGC..UGGA..G.CC..GGGUGAUGAC..................................................................GCAC.CAGUCAGGAGACCUGCCGGCUUACAUUCACCAACC
P.mendocina.3 CP000680.1/1925111-1925322 CCUGCGCGCCUUGCUUCAGGUG..CCCCGCGUCGUCUCCAUCGA.........CGGCG....CCGGGGUG......AAACA.GGGAA.G.CC.G.G.UUC.........C.....................AAUGCCGG.CGCUGCCC.CC.GCAACGGUAG..GU.GA..........GUCAAACGCUGUUUCAG............................GCCACUGUGC..AAU...........................................................GC.ACGGGAAGGC...GCA..G.CG..UCGAACCUUU.........................................................CAGGUUCGCUCAC.GAGCCCGGAGACCGGCCUGUCGCAGUUCCACGGCA
Pseudomonas_fluoresc.4 CP000076.1/5141454-5141221 CCUUCGCGACUUGUUUCAGGUG..CUCUGUGGCCCGU................GGCCG....ACAGAGUG......AAACA.GGGAA.G.CC.G.G.UCAGGGUCUGUUCCAGUGAUGGAGCCGACGAC..GAUUCCGG.CGCUGCCC.CC.GCAACGGUAG..AU.GAG.........UCAAGACUGCGCCUGAC............................GCCACUGUGUCAAUG...........................................................AC.ACGGGAAGGC...GCG..C.AG..UCCGGCAGCC...........................................................AUGCCGCUCAU.GAGCCCGGAGACCGGCCUGAUCCAUCCAACGGCAU
Pseudomonas_aerugino.3 AAKV01000038.1/3066-2875 GUAGCCUUGCCGGUUCGAGGUU..CCUCGCC......................GGCGACG..GCGGGGCU......AAGA..GGGAA.C.GC.G.G.U.C...............................GAUGCCGC.GGCUGCCC.CC.GCAACUGUGA..AC.GG..........CGAUCGUUCCCCAAU..............................GCCACUGCGU...............................................................GAC.GCGGGAAGGC...GGG..G.AA..CCGGCGGAGA...........................................................CGCCAGACCGU.GAGCCAGGAGACCUGCCUCGUCGAUCCCGUGGCGC
Pseudomonas_syringae.3 CP000058.1/2582044-2581830 CCUGUACGCCUUGUUUCGGGUG..CCCCU........................CACG........GGGUG......AAAC..GGGAA.A.CC.G.G.UGCGCUCACGCUGUCGAGC...............AAGUCCGG.UGCUGCCC.CC.GCAACGGUAA..GC.GA.............GAGAAGGUCUUA..............................UCCACUGUGC..UAC..........................................................GGC.AUGGGAAGGU...GAC..C.UU..GCAGGCCUUG.............................................AACGCGCGACGUUUGAGCCCCUCGC.GAGCCCGGAGACCGGCCCGACAUCGUUGAAUGACA
Pseudomonas_syringae.4 CP000058.1/3489261-3489461 UUUACCAUGCCGCCCGUCGGU...UUCCG........................AGAG........GAACU......AACA..GGGAA.U.UC.G.....CACGCUUUGUCUGCACAAGGCC..........AAAA.CGA.AACUGCCC.CC.GCAACUGUAG..GC.AU..........CGAGCCUGCUCCAUGACU...........................GCCACUGGAU..UAA..........................................................GCU.CCGGGAAGGC..CGGA..G.CC..UGGCGAUGAC..................................................................AUGC.CAGUCAGGAGACCUGCCGACCUGCUUCAACCCACU
Pseudomonas_syringae.5 CP000075.1/4368222-4368008 CCUUCGCGGUUUGUUUCAGGUG..CUCUGCAAUCCUC................GAUUG....GCAGAGUG......AAACA.GGGAA.G.CC.G.G.UGUGGGUCGACAGAUCC.................GAUCCCGG.CGCUGCCC.CC.GCAACGGUAA..AU.GAG.........UCAAGGCUGUGCCUGAC............................GCCACUGUGU..UUC..........................................................GAC.AUGGGAAGGC...GCG..C.AG..CCGGGGUGAC..............................................................CCGCUCAU.GAGCCCGGAGACCGGCCUGAAUCACUCAAUGACAU
Pseudomonas_syringae.6 CP000075.1/3709306-3709505 UUUACCAUGCCGCGCGUCGGU...UUCCG........................AGAG........GAACU......AACA..GGGAA.U.UC.G...CACGCCUUUCUCACCAGGCG..............AAAAACGA.AACUGCCC.CC.GCAACUGUAG..GC.AC..........CGAGCCUGCUCCAUGACU...........................GCCACUGGAU..CGU..........................................................GAU.CCGGGAAGGC..CGGA..G.CC..UGGCGAUGAC..................................................................GUGU.CAGUCAGGAGACCUGCCGACCCGCUUCAACCCACU
Reinekea_blandensis_.1 AAOE01000043.1/7099-6915 GUUGGCGAUGUCACUGACGGUU..UAAGACA......................AGCUG....UACUUGUC.........U..GGGAA.U.CC.G.G.UUA...............................AAUUCCGG.AGCUGCCC.CC.GCAACUGUAA..UG.GU..........CAGGACGAUGUCUGUUU............................GCCACUGAAAAUUAU...........................................................UU.UCGGGAAGGC...GAC..A.UC..GAGCCGUA....................................................................GCCA.GAGCCAGGAGACCGGCCGUCGUGCAUCUCGCAUCA
Stenotrophomonas_mal.1 CP001111.1/542487-542264 AGACUGCGCGCACUUCCAGGUG..ACCUGCGGCCAU.................GGCCG....GCAGGUUG......AAAC..GGGAA.G.CC.G.G.UGACGCGUGAUUCCACGC................CAUGCCGG.CGCUGCCC.CC.GCAACGGUAA..GCACG..........UCAGUUCCAGGCAACACC...........................GCCACUGUGCCGCAG...........................................................GC.AUGGGAAGGC...GCC..U.GG..ACGGUGGCCU......................................................CGCGCCACCCGGCGGC.AAGCCCGGAGACCGGCCCGGAAGCCUCAGGUCGCG
X.euvesicatoria.1 AM039952.1/3802147-3801923 UACCAUGCGCGCCCCUGAGGUG..ACUGCCG......................GUUGGCC..GGUGGUUU......AAAC..GGGAA.U.CC.G.G.UGCGCGCGUCGCCUUGGGCCAGGCGC........AAUUCCGG.AGCUGCCC.CC.GCAACGGUGG..GC.GAG.........GCCAGGUGCCGCAACAU............................GCCACUGUGC.AGCC...........................................................GC.AUGGGAAGGC...GCG..G.CA..UCGGAAGCAC........................................................CAGCUUCCACUCGC.GAGCCCGGAGACCGGCCUGAGGGAUUGACCCGGCA
Xanthomonas_oryzae_p.1 AE013598.1/1368227-1368452 UACCAUGCGCGCCCCUGAGGUG..ACUGUCG......................GCUUGCC..GGCGGUUU......AAAC..GGGAA.U.CC.G.G.UGCGCAGAUCGCCUUGGCGUGGUGC.........AAUUCCGG.AGCUGCCC.CC.GCAACGGUGG..GC.GAG.........ACAAGGGUCUGCAUGUAAC..........................ACCACUGUGC..GGU...........................................................GC.ACGGGAAGGC...GCA..G.AU..CCGGGAAGCG.......................................................AUUGCUUCCGCUCGC.AAGCCCGGAGGCCGGCCUGAAGGGAUUGACCCGGC
Xanthomonas_campestr.1 AE008922.1/3631190-3630967 UACCAUGCGCGCCCCUGAGGUG..ACUGCCG......................GAAUUCC..GGUGGUUU......AAAC..GGGAA.U.CC.G.G.UGCGCGCAUCGCCUUGGCGAGACGC.........AAGUCCGG.AGCUGCCC.CC.GCAACGGUGG..GC.GAG.........GUCAGGUGCCGCAACAG............................GCCACUGUGC.ACAC...........................................................GC.AUGGGAAGGC...GCG..G.UA..CCGGAAGCGC........................................................AGGCUUCCACUCGC.GAGCCCGGAGACCGGCCUGAGGGAUUGACCCGGCA
Endoriftia_persephon.1 AASF01001990.1/2185-2411 UCCUGCGGCUCUGCUUCAGGUG..UCCCAAGGGUAUCCA..............CCCCC....AAGGGAUG......AAAC..GGGAA.G.CC.G.G.UACGUACUGGUGAAAAUCAGAAC...........AAUUCCGG.CGCUGCCC.CC.GCAACGGUAG..GC.GAG.........UUGCGGCGGAUCAUACA............................GCCACUGCGU..UUC..........................................................GAC.GUGGGAAGGC...GAU..C.CG..CCAGGGUCUG.........................................................CAAGACCACUCGC.AAGCCCGGAGACCGGCCUGGAGCCCAAGGAACCUC
Fervidobacterium_nod.1 CP000771.1/268818-268646 AUAAACCUCCCUUUGCAUGUUG.......................................................AAA..GGGAA.GCCC.G.G.UGA...............................AAAUCCGG.CGCGGG.G.CC.GCCACCGUGA..GU.GGG.........GACGAAAUUCACAAUAU............................ACCACUGGCCUAAUUU.........................................................UGG.CUGGGAAGGU...GUG..A.AG.AGUAGGAUGAU..................................................................CCAC.GAGUCGGGAGACCUAACAUGCAAAGGAAGGGAGCC
Fervidobacterium_nod.2 CP000771.1/1485865-1486047 AAUAUUCCAAACUGCGAAGGU...GCCGA..................................AAGGCUU......AAUA..GGGAA.CUCC.G.G.UGA...............................GAAUCCGG.GACGGU.C.GG.GCCACCGUGA..GU.GGG.........GACGAAAUGCUCAACUG............................GCCACUGGCUUUUUU...........................................................AG.CUGGGAAGGC...GAG..C.AG..AGUAGGAUGA.................................................................GCCAC.AAGUCGGGAGACCUGCCUUCGUAGGAUGGCAUUCC
Thermosipho_melanesi.1 CP000716.1/891454-891623 AUAUAAAUUGUUACUAUAGGUU........................................................AA..GGGAA.CUCC.G.G.UGA...............................AAAUCCGG.GGCUGC.C.CA.GCAACCGUAA..CC.GGG.........GACGAAAUCCACAAAAU............................GUCACUGGGAAUUUU...........................................................UC.CUGGGAAGGC...GUG..G.AG..AGUAGGUUGA.................................................................UCCGG.GAGCCGGGAGACCUGCCUAUAGUAAGGUUAUUUCC
Thermosipho_melanesi.2 CP000716.1/1854993-1855172 AAUAACCAAUGGAAUAAAGGU...GCCUU.................................AAAGGCUU......AAUA..GGGAA.G.CU.G.G.UGA...............................AAAUCCAG.CGCGGC.C.CC.GCCACCGUAA..CU.GGG.........GACGAAAGUCGCAAAGU............................GCCACUGGGA....U..........................................................UUC.CUGGGAAGGU...GCG..A.CG..AGUAGGUUGA.................................................................UCCAG.AAGCCGGGAGACCUGCCUUUGUUCCAAAGUGUUUC
Thermosipho_melanesi.3 CP000716.1/734867-735049 AAAUAAUAAAACAUCUAGGGU...ACCAA..................................GCGGUUU......AAAA..GGGAA.CUCC.G.G.UGA...............................AAGUCCGG.GGCUGC.C.CA.GCAACCGUAA..CC.GGG.........GACGAAAUCCACAAAAU............................GCCACUGGGAAUUUU...........................................................UC.CUGGGAAGGC...GUG..G.AG..AGUAGGUUGA.................................................................UCCGG.GAGCCGGGAGACCUGCCUUAGAUGUAUGGACUCCA
Thermotoga_petrophil.1 CP000702.1/858840-859024 AAGCCUCCCUCACCGUGCGGU...ACCCU........................UCGG........GGUUC......AAAG..GGGAA.G.CC.G.G.UGG...............................AAAUCCGG.CGCGGG.G.CC.GCCACCGUGA..CC.GGG.........GACGAAACCCGCAGAAC............................GCCACUGGGGCGAUC..........................................................ACC.CUGGGAAGGU...GCG..G.GG.AGUAGGAUGAU..................................................................CCGG.AAGCCGGGAAACCCGCCCGCGGUGAAGGGAAACCA