# -------------------------------------------------------------------------- #
#                                 CAMPAIGN(tm)                               #
# -------------------------------------------------------------------------- #
# This is part of the CAMPAIGN data clustering library originating from      #
# Simbios, the NIH National Center for Physics-Based Simulation of           #
# Biological Structures at Stanford, funded under the NIH Roadmap for        #
# Medical Research, grant U54 GM072970, and the FEATURE project at Stanford, #
# funded under the NIH grant LM05652.  See https://simtk.org and             #
# http://feature.stanford.edu/index.php                                      #
#                                                                            #
# Portions copyright (c) 2010 Stanford University, Authors and Contributors  #
# Authors:  Marc Sosnick                                                     #
# Contributors: Kai J. Kolhoff, William Hsu                                  #
#                                                                            #
# Permission is hereby granted, free of charge, to any person obtaining a    #
# copy of this software and associated documentation files (the "Software"), #
# to deal with the Software limited to the rights to use, copy, modify, merge#
# and publish. No redistribution, licensing or commercialization             #
# is allowed without written permission.                                     #
#                                                                            #
# Software is furnished subject to the following conditions:                 #
#                                                                            #
# The above copyright notice and this permission notice shall be included in #
# all copies or substantial portions of the Software.                        #
#                                                                            #
# THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR #
# IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,   #
# FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL    #
# THE AUTHORS, CONTRIBUTORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM,    #
# DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR      #
# OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE  #
# USE OR OTHER DEALINGS IN THE SOFTWARE.                                     #
# -------------------------------------------------------------------------- #

# $Id$

# Makefile
# Makefile for the CAMPAIGN Developer Distribution
#
# Configuration:
#   See common.mk for system configuration.
#   You may add another directory in which to descnd and make by adding
#   its name to the SUBDIRS list.
#  
# Usage:
#   From the command line in the dev directory, type make.  The system
#   will descend into each directory and execute the makefile in that 
#   directory.  Make clean will remove executables, objects, and temp
#   files from all SUBDIRS.  See README for more detailed instructions.
# 

SUBDIRS := 	util \
	   	hierarchicalCPU \
	   	hierarchicalGPU \
		kcentersCPU \
		kcentersGPU \
		kmeansCPU \
		kmeansGPU \
		kmedoidsCPU \
		kmedoidsGPU \
		kpsmeansGPU \
		rmsdGPU \
		somCPU \
		somGPU

all:
	@for dir in $(SUBDIRS); do \
	  echo ; \
	  echo Making $$dir; \
	  $(MAKE) -C $$dir; \
	done

clean:
	@for dir in $(SUBDIRS); do \
	  echo ; echo Cleaning $$dir; \
	  $(MAKE) -C $$dir clean; \
	done


distribution:
	cp hierarchicalCPU/hierarchicalCPU.h release/campaign
	cp hierarchicalCPU/hierarchicalCPU.cpp release/campaign
	cp hierarchicalCPU/hierarchicalCPUMain.cc release/examples/hierarchicalCPU.cc
	cp hierarchicalGPU/hierarchicalGPU.cu release/campaign
	cp hierarchicalGPU/hierarchicalGPU.h release/campaign
	cp hierarchicalGPU/min.cu release/campaign
	cp hierarchicalGPU/min.h release/campaign
	cp hierarchicalGPU/hierarchicalGPUMain.cc release/examples/hierarchicalGPU.cc
	cp kcentersCPU/kcentersCPU.h release/campaign
	cp kcentersCPU/kcentersCPU.cpp release/campaign
	cp kcentersCPU/kcentersCPUMain.cc release/examples/kcentersCPU.cc
	cp kcentersGPU/kcentersGPU.h release/campaign
	cp kcentersGPU/kcentersGPU.cu release/campaign
	cp kcentersGPU/kcentersGPUMain.cc release/examples/kcentersGPU.cc
	cp kmeansCPU/kmeansCPU.h release/campaign
	cp kmeansCPU/kmeansCPU.cpp release/campaign
	cp kmeansCPU/kmeansCPUMain.cc release/examples/kmeansCPU.cc
	cp kmeansGPU/kmeansGPU.h release/campaign
	cp kmeansGPU/kmeansGPU.cu release/campaign
	cp kmeansGPU/kmeansGPUMain.cc release/examples/kmeansGPU.cc
	cp kmedoidsCPU/kmedoidsCPU.h release/campaign
	cp kmedoidsCPU/kmedoidsCPU.cpp release/campaign
	cp kmedoidsCPU/kmedoidsCPUMain.cc release/examples/kmedoidsCPU.cc
	cp kmedoidsGPU/kmedoidsGPU.h release/campaign
	cp kmedoidsGPU/kmedoidsGPU.cu release/campaign
	cp kmedoidsGPU/kmedoidsGPUMain.cc release/examples/kmedoidsGPU.cc
	cp kpsmeansGPU/kpsmeansGPU.h release/campaign
	cp kpsmeansGPU/kpsmeansGPU.cu release/campaign
	cp kpsmeansGPU/kpsmeansGPUMain.cc release/examples/kpsmeansGPU.cc
	cp rmsdGPU/rmsdGPU.h release/campaign
	cp rmsdGPU/rmsdGPU.cu release/campaign
	cp rmsdGPU/rmsdGPUMain.cc release/examples/rmsdGPU.cc
	cp somCPU/somCPU.h release/campaign
	cp somCPU/somCPU.cpp release/campaign
	cp somCPU/somCPUMain.cc release/examples/somCPU.cc
	cp somGPU/somGPU.h release/campaign
	cp somGPU/somGPU.cu release/campaign
	cp somGPU/somGPUMain.cc release/examples/somGPU.cc
	cp util/gpudevices.h release/campaign
	cp util/dataio.cpp release/campaign
	cp util/dataio.h release/campaign
	cp util/defaults.cpp release/campaign
	cp util/defaults.h release/campaign
	cp util/gpudevices.cpp release/campaign
	cp util/metricsCPU.h release/campaign
	cp util/metricsGPU.h release/campaign
	cp util/timing.cpp release/campaign
	cp util/timing.h release/campaign
	cp util/tokens.cpp release/campaign
	cp util/tokens.h release/campaign
	cp util/index.h release/campaign