\BOOKMARK [1][-]{section*.1}{Introduction}{}
\BOOKMARK [1][-]{section*.2}{Theory}{}
\BOOKMARK [2][-]{section*.3}{Discrete-state Markovian kinetic models}{section*.2}
\BOOKMARK [2][-]{section*.4}{Transition probabilities by reweighting}{section*.2}
\BOOKMARK [3][-]{section*.5}{Dynamical reweighting}{section*.4}
\BOOKMARK [3][-]{section*.6}{Modified parallel tempering protocol}{section*.4}
\BOOKMARK [3][-]{section*.7}{Transition probabilities}{section*.4}
\BOOKMARK [2][-]{section*.8}{Bayesian estimate of transition probabilities from a single temperature}{section*.2}
\BOOKMARK [1][-]{section*.9}{Application to terminally-blocked alanine peptide}{}
\BOOKMARK [1][-]{section*.10}{Discussion}{}
\BOOKMARK [1][-]{section*.11}{Acknowledgments}{}
\BOOKMARK [1][-]{section*.12}{Proof that modified parallel tempering protocol generates canonical distribution}{}
\BOOKMARK [1][-]{section*.13}{Estimation of uncertainties in transition probabilities}{}