Flat profile: Each sample counts as 0.01 seconds. % cumulative self self total time seconds seconds calls s/call s/call name 53.87 34.50 34.50 178078 0.00 0.00 ._ZN8CProtein13ParseDSSPLineEPKc 17.83 45.92 11.42 2503507 0.00 0.00 ._ZN11CLISPParser7GetLineEPc 5.28 49.30 3.38 199200745 0.00 0.00 ._ZNK8CObArray5GetAtEi 2.59 50.96 1.66 6669577 0.00 0.00 ._Z11ParseStringPcPKcii 1.26 51.77 0.81 869 0.00 0.01 ._ZN8NeighborC1EPK11SuperVectorIP8SPoint3DEf 0.67 52.20 0.43 9163179 0.00 0.00 ._ZNK9SuperHashIiEclERKi 0.62 52.60 0.40 ._ZN8CObArray9RemoveAllEv 0.58 52.97 0.37 869 0.00 0.00 ._Z10MarkHetatmP10CAtomArray 0.58 53.34 0.37 3054393 0.00 0.00 ._ZNK9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE14_M_bkt_num_keyERS4_m 0.55 53.69 0.35 2987080 0.00 0.00 ._ZN5SAtom9GetChargeEv 0.53 54.03 0.34 4165298 0.00 0.00 ._ZN8CObArray7SetSizeEii 0.50 54.35 0.32 1444154 0.00 0.00 ._ZN5SAtom12ParsePDBAtomEPKc 0.45 54.64 0.29 2776608 0.00 0.00 ._ZN10CAtomArray7AddAtomEP5SAtomb 0.44 54.92 0.28 3054393 0.00 0.00 ._ZNK8Neighbor4Cell4HashclERKS0_ 0.42 55.19 0.27 1388585 0.00 0.00 ._Z17ConvertStructCodec 0.42 55.46 0.27 1 0.27 63.28 ._ZN9Featurize23RunPointEnvironmentModeEv 0.41 55.72 0.26 4939382 0.00 0.00 ._ZNKSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE4sizeEv 0.34 55.94 0.22 6943450 0.00 0.00 ._Z11ParseDoublePdPKcii 0.34 56.16 0.22 2201943 0.00 0.00 ._Z10IsStringInPKcS0_ 0.31 56.36 0.20 1525962 0.00 0.00 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE22insert_unique_noresizeERKS8_ 0.30 56.55 0.19 4700304 0.00 0.00 ._Z9ParseCharPcPKci 0.30 56.74 0.19 1443367 0.00 0.00 ._ZN8CProtein9ParseAtomEPKc 0.28 56.92 0.18 6376067 0.00 0.00 ._ZNKSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE5beginEv 0.27 57.09 0.17 4165298 0.00 0.00 ._ZN5SAtomC1Ev 0.25 57.25 0.16 4940251 0.00 0.00 ._ZN9__gnu_cxxmiIPKPNS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESD_St6vectorISB_SaISB_EEEENS_17__normal_iteratorIT_T1_E15difference_typeERKSK_RKNSH_IT0_SJ_EE 0.25 57.41 0.16 4165298 0.00 0.00 ._ZN8CObArray9SetAtGrowEiP7CObject 0.25 57.57 0.16 3033923 0.00 0.00 ._ZNK9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE14_M_bkt_num_keyERS4_ 0.25 57.73 0.16 2502638 0.00 0.00 ._ZN8CProtein12ParsePDBLineEPKc 0.23 57.88 0.15 869 0.00 0.00 ._ZN10CAtomArrayD1Ev 0.22 58.02 0.14 4165298 0.00 0.00 ._ZN8CObArray3AddEP7CObject 0.22 58.16 0.14 869 0.00 0.00 ._ZN8CProteinD1Ev 0.22 58.30 0.14 4939382 0.00 0.00 ._ZNKSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE3endEv 0.22 58.44 0.14 4167036 0.00 0.00 ._ZN14CProteinObjectD2Ev 0.22 58.58 0.14 2293831 0.00 0.00 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EEixEm 0.22 58.72 0.14 751928 0.00 0.00 ._ZN5SAtom12GetVDWRadiusEv 0.20 58.85 0.13 751928 0.00 0.00 ._ZN15SAtomProperties14SetResidueNameEP5SAtom 0.20 58.98 0.13 751928 0.00 0.00 ._ZN15SAtomProperties7SetTypeEP5SAtom 0.19 59.10 0.12 1387918 0.00 0.00 ._ZSt10_ConstructIP8SPoint3DS1_EvPT_RKT0_ 0.18 59.22 0.12 4167036 0.00 0.00 ._ZN14CProteinObjectC2Ev 0.17 59.33 0.11 751928 0.00 0.00 ._ZN5SAtom17GetHydrophobicityEv 0.17 59.44 0.11 12752134 0.00 0.00 ._ZN9__gnu_cxx17__normal_iteratorIPKPNS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESt6vectorISB_SaISB_EEEC1ERKSD_ 0.17 59.55 0.11 751928 0.00 0.00 ._ZNK8SPoint3D14GetDistanceSqrERKS_ 0.17 59.66 0.11 869 0.00 0.02 ._ZN8CProtein11ReadPDBFileEPKc 0.16 59.76 0.10 751928 0.00 0.00 ._ZN15SAtomProperties16SetChargeWithHisEP5SAtom 0.16 59.86 0.10 869 0.00 0.00 ._ZN10CAtomArrayD2Ev 0.14 59.95 0.09 1435816 0.00 0.00 ._ZNK9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE4findERS4_ 0.14 60.04 0.09 7418 0.00 0.00 ._Z8FindFilePcPPKcS2_S2_S2_ 0.14 60.13 0.09 4165298 0.00 0.00 ._ZN5SAtomD1Ev 0.13 60.21 0.09 1399133 0.00 0.00 ._ZNKSt6vectorIP8SPoint3DSaIS1_EE3endEv 0.12 60.29 0.08 3528536 0.00 0.00 ._ZN10CAtomArray7GetAtomEi 0.12 60.37 0.08 3219284 0.00 0.00 ._ZNK8Neighbor4Cell5EqualclERKS0_S3_ 0.12 60.45 0.08 3133536 0.00 0.00 ._Z9ParseLongPlPKcii 0.12 60.53 0.08 2293831 0.00 0.00 ._ZNK9__gnu_cxx17__normal_iteratorIPPNS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESt6vectorISB_SaISB_EEEplERKl 0.12 60.61 0.08 1525962 0.00 0.00 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE6resizeEm 0.12 60.69 0.08 1435816 0.00 0.00 ._ZNK9__gnu_cxx17__normal_iteratorIPKPNS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESt6vectorISB_SaISB_EEEplERKl 0.12 60.77 0.08 1388690 0.00 0.00 ._ZN5SAtom22SetResidueFullSequenceEPS_ 0.12 60.85 0.08 869 0.00 0.00 ._ZN10CAtomArray18ExtractMarkedAtomsEi 0.11 60.92 0.07 751928 0.00 0.00 ._ZN15SAtomProperties16SetPartialChargeEP5SAtom 0.11 60.99 0.07 751928 0.00 0.00 ._ZN15SAtomProperties23CalculateAtomPropertiesEP5SAtom 0.11 61.06 0.07 459891 0.00 0.00 ._ZNKSt6vectorIiSaIiEE4sizeEv 0.11 61.13 0.07 2776608 0.00 0.00 ._ZN5SAtomaSERS_ 0.11 61.20 0.07 1525962 0.00 0.00 ._ZN12SuperHashMapIN8Neighbor4CellEP11SuperVectorIiENS1_4HashENS1_5EqualEEixERKS1_ 0.11 61.27 0.07 1435816 0.00 0.00 ._ZNK12SuperHashMapIN8Neighbor4CellEP11SuperVectorIiENS1_4HashENS1_5EqualEE6hasKeyERKS1_ 0.11 61.34 0.07 1435816 0.00 0.00 ._ZNKSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EEixEm 0.11 61.41 0.07 751928 0.00 0.00 ._ZN8SPoint3DaSERKS_ 0.11 61.48 0.07 446308 0.00 0.00 ._ZNSt6vectorIiSaIiEE13_M_insert_auxEN9__gnu_cxx17__normal_iteratorIPiS1_EERKi 0.10 61.55 0.07 1387918 0.00 0.00 ._ZSt10_ConstructIiiEvPT_RKT0_ 0.09 61.61 0.06 9103484 0.00 0.00 ._ZN7CObjectC2Ev 0.09 61.67 0.06 7881471 0.00 0.00 ._ZN8CObArray7GetSizeEv 0.09 61.73 0.06 751928 0.00 0.00 ._ZN15SAtomProperties12SetPosChargeEP5SAtom 0.09 61.79 0.06 751928 0.00 0.00 ._ZN15SAtomProperties18SetFunctionalGroupEP5SAtom 0.09 61.84 0.06 4931234 0.00 0.00 ._ZN8SPoint3DD1Ev 0.08 61.89 0.05 9880502 0.00 0.00 ._ZNK9__gnu_cxx17__normal_iteratorIPKPNS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESt6vectorISB_SaISB_EEE4baseEv 0.08 61.94 0.05 1388787 0.00 0.00 ._ZN9__gnu_cxxneIPKP8SPoint3DSt6vectorIS2_SaIS2_EEEEbRKNS_17__normal_iteratorIT_T0_EESD_ 0.08 61.99 0.05 1840 0.00 0.00 ._ZSt8_DestroyIPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEEvT_SD_ 0.08 62.04 0.05 ._ZN14CProteinObjectC1Em 0.07 62.09 0.05 1387918 0.00 0.00 ._ZNSt6vectorIiSaIiEE9push_backERKi 0.06 62.13 0.04 5342121 0.00 0.00 ._ZN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEC1ERKS1_ 0.06 62.17 0.04 5001984 0.00 0.00 ._ZNK9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEE4baseEv 0.06 62.21 0.04 4590269 0.00 0.00 ._ZN9__gnu_cxx17__normal_iteratorIPPNS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESt6vectorISB_SaISB_EEEC1ERKSC_ 0.06 62.25 0.04 2293831 0.00 0.00 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE5beginEv 0.06 62.29 0.04 1435816 0.00 0.00 ._ZNK9__gnu_cxx8hash_mapIN8Neighbor4CellEP11SuperVectorIiENS2_4HashENS2_5EqualESaIS5_EE4findERKS2_ 0.06 62.33 0.04 954963 0.00 0.00 ._ZSt4copyIN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEES6_ET0_T_S8_S7_ 0.06 62.37 0.04 751928 0.00 0.00 ._ZN15SAtomPropertiesD1Ev 0.06 62.41 0.04 751928 0.00 0.00 ._ZNSt6vectorIiSaIiEEixEm 0.06 62.45 0.04 446308 0.00 0.00 ._ZN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEppEv 0.06 62.49 0.04 38729 0.00 0.00 ._ZNSt6vectorIiSaIiEE15_M_range_insertIN9__gnu_cxx17__normal_iteratorIPiS1_EEEEvS6_T_S7_St20forward_iterator_tag 0.06 62.53 0.04 10644 0.00 0.00 ._Z16PrintEnvironmentR16CPropertiesArrayP8_IO_FILE 0.06 62.57 0.04 ._ZN8SPoint3DC2Ev 0.05 62.60 0.04 2902258 0.00 0.00 ._ZnwmPv 0.05 62.63 0.03 9163179 0.00 0.00 ._ZNK9__gnu_cxx4hashIiEclEi 0.05 62.66 0.03 9103484 0.00 0.00 ._ZN7CObjectD2Ev 0.05 62.69 0.03 4917226 0.00 0.00 ._ZN8SPoint3DC1Ev 0.05 62.72 0.03 1656466 0.00 0.00 ._ZNKSt10_Select1stISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEclERS7_ 0.05 62.75 0.03 1525962 0.00 0.00 ._ZN9__gnu_cxx8hash_mapIN8Neighbor4CellEP11SuperVectorIiENS2_4HashENS2_5EqualESaIS5_EE6insertERKSt4pairIKS2_S5_E 0.05 62.78 0.03 1525962 0.00 0.00 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE13insert_uniqueERKS8_ 0.05 62.81 0.03 1387918 0.00 0.00 ._ZN9__gnu_cxx17__normal_iteratorIPKP8SPoint3DSt6vectorIS2_SaIS2_EEEppEi 0.05 62.84 0.03 751928 0.00 0.00 ._ZN15SAtomProperties12SetVDWVolumeEP5SAtom 0.05 62.87 0.03 7418 0.00 0.00 ._Z15FindProteinFilePcPKcS1_PS1_ 0.03 62.89 0.02 4837861 0.00 0.00 ._ZNKSt10_Select1stISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEclERKS7_ 0.03 62.91 0.02 2798266 0.00 0.00 ._ZN9__gnu_cxx17__normal_iteratorIPKP8SPoint3DSt6vectorIS2_SaIS2_EEEC1ERKS4_ 0.03 62.93 0.02 2798266 0.00 0.00 ._ZNK9__gnu_cxx17__normal_iteratorIPKP8SPoint3DSt6vectorIS2_SaIS2_EEE4baseEv 0.03 62.95 0.02 2293831 0.00 0.00 ._ZNK9__gnu_cxx17__normal_iteratorIPPNS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESt6vectorISB_SaISB_EEEdeEv 0.03 62.97 0.02 1627015 0.00 0.00 ._ZN9__gnu_cxx19_Hashtable_iteratorISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EEC1EPNS_15_Hashtable_nodeIS8_EEPNS_9hashtableIS8_S3_S9_SB_SC_SD_EE 0.03 62.99 0.02 1525962 0.00 0.00 ._ZNSt4pairIKN8Neighbor4CellEP11SuperVectorIiEEC1IS1_S5_EERKS_IT_T0_E 0.03 63.01 0.02 1525962 0.00 0.00 ._ZNSt4pairIN9__gnu_cxx19_Hashtable_iteratorIS_IKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EEEbEC1ERKSE_RKb 0.03 63.03 0.02 1435816 0.00 0.00 ._ZNK9__gnu_cxx25_Hashtable_const_iteratorISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EEneERKSE_ 0.03 63.05 0.02 1435816 0.00 0.00 ._ZNK9__gnu_cxx8hash_mapIN8Neighbor4CellEP11SuperVectorIiENS2_4HashENS2_5EqualESaIS5_EE3endEv 0.03 63.07 0.02 1435816 0.00 0.00 ._ZNK9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE3endEv 0.03 63.09 0.02 1392166 0.00 0.00 ._ZN10CAtomArray8NumAtomsEv 0.03 63.11 0.02 1387918 0.00 0.00 ._ZNSt6vectorIP8SPoint3DSaIS1_EE9push_backERKS1_ 0.03 63.13 0.02 954963 0.00 0.00 ._ZSt10__copy_ni1IN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEES6_ET0_T_S8_S7_11__true_type 0.03 63.15 0.02 751928 0.00 0.00 ._ZN15SAtomProperties12SetNegChargeEP5SAtom 0.03 63.17 0.02 751928 0.00 0.00 ._ZN5SAtom10IsBackboneEv 0.03 63.19 0.02 751928 0.00 0.00 ._ZNK8SPoint3D11GetDistanceERKS_ 0.03 63.21 0.02 751928 0.00 0.00 ._ZNK9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEdeEv 0.03 63.23 0.02 643540 0.00 0.00 ._Z12IsFileExistsPKc 0.03 63.25 0.02 643540 0.00 0.00 .stat 0.03 63.27 0.02 101089 0.00 0.00 ._ZNSt12_Vector_baseIiSaIiEED2Ev 0.03 63.29 0.02 99315 0.00 0.00 ._ZN9__gnu_cxx19_Hashtable_iteratorISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EEppEv 0.03 63.31 0.02 99315 0.00 0.00 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE14_M_delete_nodeEPNS_15_Hashtable_nodeIS8_EE 0.03 63.33 0.02 1738 0.00 0.00 ._ZSt14__copy_trivialIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEEPT_PKSC_SF_SD_ 0.03 63.35 0.02 869 0.00 0.00 ._ZN13CNeighborhood17GeneratePointListEP10CAtomArray 0.03 63.37 0.02 869 0.00 0.00 ._ZN8NeighborD1Ev 0.03 63.39 0.02 869 0.00 0.00 ._ZN9__gnu_cxx8hash_mapIN8Neighbor4CellEP11SuperVectorIiENS2_4HashENS2_5EqualESaIS5_EED2Ev 0.03 63.41 0.02 1 0.02 0.04 ._ZN17PdbidPointListMapD1Ev 0.03 63.43 0.02 ._Z13setdebugleveli 0.02 63.45 0.02 459891 0.00 0.00 ._ZNKSt6vectorIiSaIiEE5beginEv 0.02 63.46 0.02 101089 0.00 0.00 ._ZNSt6vectorIiSaIiEED2Ev 0.02 63.47 0.01 1625277 0.00 0.00 ._ZNK9__gnu_cxx19_Hashtable_iteratorISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EEdeEv 0.02 63.48 0.01 1598107 0.00 0.00 ._ZNK9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE10_M_bkt_numERKS8_ 0.02 63.49 0.01 1525962 0.00 0.00 ._ZNSt4pairIN8Neighbor4CellEP11SuperVectorIiEEC1ERKS1_RKS4_ 0.02 63.50 0.01 1435816 0.00 0.00 ._ZNK9__gnu_cxx17__normal_iteratorIPKPNS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESt6vectorISB_SaISB_EEEdeEv 0.02 63.51 0.01 1387918 0.00 0.00 ._ZNK9__gnu_cxx17__normal_iteratorIPKP8SPoint3DSt6vectorIS2_SaIS2_EEEdeEv 0.02 63.52 0.01 1236965 0.00 0.00 ._ZNSt6vectorIiSaIiEE5beginEv 0.02 63.53 0.01 996994 0.00 0.00 ._ZNSt6vectorIiSaIiEE3endEv 0.02 63.54 0.01 928043 0.00 0.00 ._ZSt24__uninitialized_copy_auxIN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEES6_ET0_T_S8_S7_11__true_type 0.02 63.55 0.01 813271 0.00 0.00 ._ZN16CPropertiesArray7AddPropEii 0.02 63.56 0.01 751928 0.00 0.00 ._ZN15SAtomPropertiesC1Ev 0.02 63.57 0.01 751928 0.00 0.00 ._ZNK9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEplERKl 0.02 63.58 0.01 459891 0.00 0.00 ._ZNKSt6vectorIiSaIiEE3endEv 0.02 63.59 0.01 458117 0.00 0.00 ._ZN9__gnu_cxx13new_allocatorIiE8allocateEmPKv 0.02 63.60 0.01 446308 0.00 0.00 ._ZSt8_DestroyIN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEEEvT_S7_ 0.02 63.61 0.01 112898 0.00 0.00 ._ZSt13__destroy_auxIPiEvT_S1_11__true_type 0.02 63.62 0.01 101089 0.00 0.00 ._ZN11SuperVectorIiEC1Ev 0.02 63.63 0.01 101089 0.00 0.00 ._ZNSaIiEC1Ev 0.02 63.64 0.01 101089 0.00 0.00 ._ZNSt6vectorIiSaIiEEC2ERKS0_ 0.02 63.65 0.01 99315 0.00 0.00 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0.00 2 0.00 0.00 ._ZN11SuperVectorIPcED2Ev 0.00 64.04 0.00 2 0.00 0.00 ._ZN7StrList13destroyCopiesEv 0.00 64.04 0.00 2 0.00 0.00 ._ZN7StrListC1Ev 0.00 64.04 0.00 2 0.00 0.00 ._ZN7StrListD1Ev 0.00 64.04 0.00 2 0.00 0.00 ._ZN9__gnu_cxx13new_allocatorIPcEC2ERKS2_ 0.00 64.04 0.00 2 0.00 0.00 ._ZN9__gnu_cxx13new_allocatorIPcEC2Ev 0.00 64.04 0.00 2 0.00 0.00 ._ZN9__gnu_cxx8hash_mapISsP9PointListNS_4hashISsEESt8equal_toISsESaIS2_EE5beginEv 0.00 64.04 0.00 2 0.00 0.00 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE5beginEv 0.00 64.04 0.00 2 0.00 0.00 ._ZNSaIPcEC1Ev 0.00 64.04 0.00 2 0.00 0.00 ._ZNSaIPcEC2ERKS0_ 0.00 64.04 0.00 2 0.00 0.00 ._ZNSaIPcED1Ev 0.00 64.04 0.00 2 0.00 0.00 ._ZNSaIPcED2Ev 0.00 64.04 0.00 2 0.00 0.00 ._ZNSt12_Vector_baseIPcSaIS0_EE12_Vector_implC1ERKS1_ 0.00 64.04 0.00 2 0.00 0.00 ._ZNSt12_Vector_baseIPcSaIS0_EE12_Vector_implD1Ev 0.00 64.04 0.00 2 0.00 0.00 ._ZNSt12_Vector_baseIPcSaIS0_EEC2ERKS1_ 0.00 64.04 0.00 2 0.00 0.00 ._ZNSt12_Vector_baseIPcSaIS0_EED2Ev 0.00 64.04 0.00 2 0.00 0.00 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE3endEv 0.00 64.04 0.00 2 0.00 0.00 ._ZNSt6vectorIPcSaIS0_EEC2ERKS1_ 0.00 64.04 0.00 2 0.00 0.00 ._ZNSt6vectorIPcSaIS0_EED2Ev 0.00 64.04 0.00 2 0.00 0.00 ._ZSt10__copy_ni2IPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEES9_ET0_T_SB_SA_12__false_type 0.00 64.04 0.00 2 0.00 0.00 ._ZSt11__copy_aux2IPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEEEPT_SA_SA_SA_11__true_type 0.00 64.04 0.00 2 0.00 0.00 ._ZSt13__destroy_auxIPPcEvT_S2_11__true_type 0.00 64.04 0.00 2 0.00 0.00 ._ZSt14__copy_trivialIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEEEPT_PKS9_SC_SA_ 0.00 64.04 0.00 2 0.00 0.00 ._ZSt8_DestroyIPPcEvT_S2_ 0.00 64.04 0.00 2 0.00 0.00 ._ZlsRSoRK7StrList 0.00 64.04 0.00 1 0.00 0.00 ._Z11fatal_errorPcz 0.00 64.04 0.00 1 0.00 0.00 ._Z12GetCoordListP8CProtein 0.00 64.04 0.00 1 0.00 0.00 ._Z12assign_typesP8CProteinP23ForceFieldParametersSetPc 0.00 64.04 0.00 1 0.00 0.00 ._Z15DumpEnvironmentP8_IO_FILEPP16CPropertiesArrayi 0.00 64.04 0.00 1 0.00 0.00 ._ZN15EnvironmentList9GetValuesEii 0.00 64.04 0.00 1 0.00 0.09 ._ZN17PdbidPointListMap4readEPKc 0.00 64.04 0.00 1 0.00 0.01 ._ZN17PdbidPointListMap7GetKeysEPPPKcPi 0.00 64.04 0.00 1 0.00 0.09 ._ZN17PdbidPointListMapC1EPKc 0.00 64.04 0.00 1 0.00 0.00 ._ZN23ForceFieldParametersSetD1Ev 0.00 64.04 0.00 1 0.00 0.00 ._ZN7StrList10extendCopyEPcPKc 0.00 64.04 0.00 1 0.00 0.00 ._ZN8CProtein7GetNameEv 0.00 64.04 0.00 1 0.00 0.00 ._ZN9Featurize14DumpParametersEi 0.00 64.04 0.00 1 0.00 0.11 ._ZN9Featurize14ParseArgumentsEiPPc 0.00 64.04 0.00 1 0.00 63.39 ._ZN9Featurize4mainEiPPc 0.00 64.04 0.00 1 0.00 0.00 ._ZN9FeaturizeC1Ev 0.00 64.04 0.00 1 0.00 0.04 ._ZN9FeaturizeD1Ev 0.00 64.04 0.00 1 0.00 0.00 ._ZN9__gnu_cxx13new_allocatorINS_15_Hashtable_nodeISt4pairIKSsP9PointListEEEEC2Ev 0.00 64.04 0.00 1 0.00 0.00 ._ZN9__gnu_cxx13new_allocatorINS_15_Hashtable_nodeISt4pairIKSsP9PointListEEEED2Ev 0.00 64.04 0.00 1 0.00 0.00 ._ZN9__gnu_cxx13new_allocatorIP9PointListEC2Ev 0.00 64.04 0.00 1 0.00 0.00 ._ZN9__gnu_cxx13new_allocatorIP9PointListED2Ev 0.00 64.04 0.00 1 0.00 0.00 ._ZN9__gnu_cxx13new_allocatorIPNS_15_Hashtable_nodeISt4pairIKSsP9PointListEEEEC2Ev 0.00 64.04 0.00 1 0.00 0.00 ._ZN9__gnu_cxx8hash_mapISsP9PointListNS_4hashISsEESt8equal_toISsESaIS2_EEC1Ev 0.00 64.04 0.00 1 0.00 0.01 ._ZN9__gnu_cxx8hash_mapISsP9PointListNS_4hashISsEESt8equal_toISsESaIS2_EED1Ev 0.00 64.04 0.00 1 0.00 0.00 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE21_M_initialize_bucketsEm 0.00 64.04 0.00 1 0.00 0.00 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EEC1EmRKS7_RKSB_RKSC_ 0.00 64.04 0.00 1 0.00 0.01 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EED1Ev 0.00 64.04 0.00 1 0.00 0.00 ._ZN9__gnu_cxxmiIPPNS_15_Hashtable_nodeISt4pairIKSsP9PointListEEES9_St6vectorIS8_SaIS8_EEEENS_17__normal_iteratorIT_T1_E15difference_typeERKSG_RKNSD_IT0_SF_EE 0.00 64.04 0.00 1 0.00 0.00 ._ZN9__gnu_cxxneIPPNS_15_Hashtable_nodeISt4pairIKSsP9PointListEEESt6vectorIS8_SaIS8_EEEEbRKNS_17__normal_iteratorIT_T0_EESI_ 0.00 64.04 0.00 1 0.00 0.00 ._ZNK9__gnu_cxx8hash_mapISsP9PointListNS_4hashISsEESt8equal_toISsESaIS2_EE4sizeEv 0.00 64.04 0.00 1 0.00 0.00 ._ZNK9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE4sizeEv 0.00 64.04 0.00 1 0.00 0.00 ._ZNKSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE8capacityEv 0.00 64.04 0.00 1 0.00 0.00 ._ZNKSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE8max_sizeEv 0.00 64.04 0.00 1 0.00 0.00 ._ZNSaIN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEEEC1IS4_EERKSaIT_E 0.00 64.04 0.00 1 0.00 0.00 ._ZNSaIN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEEED1Ev 0.00 64.04 0.00 1 0.00 0.00 ._ZNSaIP9PointListEC1Ev 0.00 64.04 0.00 1 0.00 0.00 ._ZNSaIP9PointListED1Ev 0.00 64.04 0.00 1 0.00 0.00 ._ZNSaIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEEEC1IS4_EERKSaIT_E 0.00 64.04 0.00 1 0.00 0.00 ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EEC2ERKS9_ 0.00 64.04 0.00 1 0.00 0.00 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE14_M_fill_insertENS0_17__normal_iteratorIPS8_SA_EEmRKS8_ 0.00 64.04 0.00 1 0.00 0.00 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE20_M_allocate_and_copyIPS8_EESC_mT_SD_ 0.00 64.04 0.00 1 0.00 0.00 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE6insertENS0_17__normal_iteratorIPS8_SA_EEmRKS8_ 0.00 64.04 0.00 1 0.00 0.00 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE7reserveEm 0.00 64.04 0.00 1 0.00 0.00 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EEC1ERKS9_ 0.00 64.04 0.00 1 0.00 0.00 ._ZSt10__copy_ni1IN9__gnu_cxx17__normal_iteratorIPPNS0_15_Hashtable_nodeISt4pairIKSsP9PointListEEESt6vectorIS9_SaIS9_EEEESA_ET0_T_SG_SF_11__true_type 0.00 64.04 0.00 1 0.00 0.00 ._ZSt10__copy_ni1IPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEES9_ET0_T_SB_SA_12__false_type 0.00 64.04 0.00 1 0.00 0.00 ._ZSt18uninitialized_copyIN9__gnu_cxx17__normal_iteratorIPPNS0_15_Hashtable_nodeISt4pairIKSsP9PointListEEESt6vectorIS9_SaIS9_EEEESA_ET0_T_SG_SF_ 0.00 64.04 0.00 1 0.00 0.00 ._ZSt18uninitialized_copyIPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEES9_ET0_T_SB_SA_ 0.00 64.04 0.00 1 0.00 0.00 ._ZSt24__uninitialized_copy_auxIN9__gnu_cxx17__normal_iteratorIPPNS0_15_Hashtable_nodeISt4pairIKSsP9PointListEEESt6vectorIS9_SaIS9_EEEESA_ET0_T_SG_SF_11__true_type 0.00 64.04 0.00 1 0.00 0.00 ._ZSt24__uninitialized_copy_auxIPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEES9_ET0_T_SB_SA_11__true_type 0.00 64.04 0.00 1 0.00 0.00 ._ZSt4copyIN9__gnu_cxx17__normal_iteratorIPPNS0_15_Hashtable_nodeISt4pairIKSsP9PointListEEESt6vectorIS9_SaIS9_EEEESA_ET0_T_SG_SF_ 0.00 64.04 0.00 1 0.00 0.00 ._ZSt4copyIPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEES9_ET0_T_SB_SA_ 0.00 64.04 0.00 1 0.00 0.00 ._ZSt4fillIN9__gnu_cxx17__normal_iteratorIPPNS0_15_Hashtable_nodeISt4pairIKSsP9PointListEEESt6vectorIS9_SaIS9_EEEES9_EvT_SF_RKT0_ 0.00 64.04 0.00 1 0.00 0.00 ._ZlsRSoRK11SuperVectorIP8SPoint3DE 0.00 64.04 0.00 1 0.00 0.00 ._ZlsRSoRK18ResidueTemplateSet 0.00 64.04 0.00 1 0.00 63.44 .main % the percentage of the total running time of the time program used by this function. cumulative a running sum of the number of seconds accounted seconds for by this function and those listed above it. self the number of seconds accounted for by this seconds function alone. This is the major sort for this listing. calls the number of times this function was invoked, if this function is profiled, else blank. self the average number of milliseconds spent in this ms/call function per call, if this function is profiled, else blank. total the average number of milliseconds spent in this ms/call function and its descendents per call, if this function is profiled, else blank. name the name of the function. This is the minor sort for this listing. The index shows the location of the function in the gprof listing. If the index is in parenthesis it shows where it would appear in the gprof listing if it were to be printed. Call graph (explanation follows) granularity: each sample hit covers 2 byte(s) for 0.02% of 64.04 seconds index % time self children called name [1] 99.1 0.00 63.44 .atexit [1] 0.00 63.44 1/1 .main [2] 0.00 0.00 1/1775 ._ZN8Neighbor12GetNeighborsERK8SPoint3D [59] 0.00 0.00 1/1 ._Z12assign_typesP8CProteinP23ForceFieldParametersSetPc [571] 0.00 0.00 1/1 ._Z15DumpEnvironmentP8_IO_FILEPP16CPropertiesArrayi [572] 0.00 0.00 1/1 ._ZN8CProtein7GetNameEv [575] 0.00 0.00 1/1 ._ZN15EnvironmentList9GetValuesEii [573] 0.00 0.00 1/1 ._ZN23ForceFieldParametersSetD1Ev [574] 0.00 0.00 1/1 ._Z12GetCoordListP8CProtein [570] 0.00 0.00 1/1 ._ZlsRSoRK18ResidueTemplateSet [609] 0.00 0.00 1/1 ._ZlsRSoRK11SuperVectorIP8SPoint3DE [608] 0.00 0.00 1/1 ._Z11fatal_errorPcz [569] 0.00 0.00 1/3 ._Z8tostringRK7StrList [544] ----------------------------------------------- 1 .main [2] 0.00 63.44 1/1 .atexit [1] [2] 99.1 0.00 63.44 1+1 .main [2] 0.00 63.39 1/1 ._ZN9Featurize4mainEiPPc [3] 0.00 0.04 1/1 ._ZN9FeaturizeD1Ev [132] 0.00 0.00 1/1 ._ZN9FeaturizeC1Ev [577] 1 .main [2] ----------------------------------------------- 0.00 63.39 1/1 .main [2] [3] 99.0 0.00 63.39 1 ._ZN9Featurize4mainEiPPc [3] 0.27 63.01 1/1 ._ZN9Featurize23RunPointEnvironmentModeEv [4] 0.00 0.11 1/1 ._ZN9Featurize14ParseArgumentsEiPPc [87] 0.00 0.00 1/1 ._ZN9Featurize14DumpParametersEi [576] ----------------------------------------------- 0.27 63.01 1/1 ._ZN9Featurize4mainEiPPc [3] [4] 98.8 0.27 63.01 1 ._ZN9Featurize23RunPointEnvironmentModeEv [4] 0.00 38.03 869/869 ._ZN8CProtein12ReadDSSPFileEPKc [6] 0.00 15.28 869/869 ._ZN8CProteinC1EPKc [7] 0.00 5.15 869/869 ._ZN13CNeighborhoodC1EP10CAtomArrayd [10] 0.07 1.51 751928/751928 ._ZN15SAtomProperties23CalculateAtomPropertiesEP5SAtom [21] 0.00 1.10 869/869 ._Z22GetNonExcludedResiduesP10CAtomArrayR7StrList [27] 0.14 0.35 869/869 ._ZN8CProteinD1Ev [36] 0.00 0.36 869/869 ._ZN13CNeighborhoodD1Ev [44] 0.15 0.12 869/869 ._ZN10CAtomArrayD1Ev [50] 0.00 0.20 1774/1774 ._ZN13CNeighborhood18GetNeighborIndexesERK8SPoint3D [60] 0.01 0.14 6549/6549 ._Z11FindPdbFilePcPKcS1_ [73] 0.02 0.11 751928/751928 ._ZNK8SPoint3D11GetDistanceERKS_ [81] 0.04 0.05 751928/751928 ._ZNSt6vectorIiSaIiEEixEm [101] 0.04 0.01 751928/751928 ._ZN15SAtomPropertiesD1Ev [124] 0.04 0.00 10644/10644 ._Z16PrintEnvironmentR16CPropertiesArrayP8_IO_FILE [142] 0.02 0.02 751928/3528536 ._ZN10CAtomArray7GetAtomEi [66] 0.01 0.01 751928/751928 ._ZN15SAtomPropertiesC1Ev [179] 0.00 0.02 869/869 ._Z12FindDsspFilePcPKcS1_ [181] 0.00 0.01 146634/146634 ._ZN16CPropertiesArray19UpdatePropertyArrayEP15SAtomProperties [210] 0.00 0.00 869/869 ._ZN17PdbidPointListMap12GetPointListEPKc [263] 0.00 0.00 1774/101089 ._ZN11SuperVectorIiED1Ev [123] 0.00 0.00 6549/643540 ._Z12IsFileExistsPKc [140] 0.00 0.00 1774/459891 ._ZNKSt6vectorIiSaIiEE4sizeEv [89] 0.00 0.00 1738/1392166 ._ZN10CAtomArray8NumAtomsEv [147] 0.00 0.00 10644/10644 ._ZN16CPropertiesArrayC1Ev [381] 0.00 0.00 10644/10644 ._ZN16CPropertiesArrayD1Ev [382] 0.00 0.00 6549/6549 ._ZNSt6vectorIPcSaIS0_EEixEm [421] 0.00 0.00 5680/5680 ._Z7warningPcz [426] 0.00 0.00 1774/1774 ._ZN9PointList8GetPointEi [433] 0.00 0.00 1774/1774 ._ZN5Point5PrintEP8_IO_FILE [432] 0.00 0.00 1738/639603 ._Z5debugiPcz [304] 0.00 0.00 869/869 ._ZN9PointList9NumPointsEv [460] 0.00 0.00 1/20 ._ZNKSt6vectorIPcSaIS0_EE4sizeEv [509] ----------------------------------------------- 34.50 3.53 178078/178078 ._ZN8CProtein12ReadDSSPFileEPKc [6] [5] 59.4 34.50 3.53 178078 ._ZN8CProtein13ParseDSSPLineEPKc [5] 3.23 0.00 190118993/199200745 ._ZNK8CObArray5GetAtEi [13] 0.27 0.00 1388585/1388585 ._Z17ConvertStructCodec [51] 0.02 0.00 534234/4700304 ._Z9ParseCharPcPKci [62] 0.01 0.00 356156/3133536 ._Z9ParseLongPlPKcii [106] 0.00 0.00 178078/7881471 ._ZN8CObArray7GetSizeEv [115] ----------------------------------------------- 0.00 38.03 869/869 ._ZN9Featurize23RunPointEnvironmentModeEv [4] [6] 59.4 0.00 38.03 869 ._ZN8CProtein12ReadDSSPFileEPKc [6] 34.50 3.53 178078/178078 ._ZN8CProtein13ParseDSSPLineEPKc [5] 0.00 0.00 21725/21725 ._ZSt6strstrPcPKc [351] ----------------------------------------------- 0.00 15.28 869/869 ._ZN9Featurize23RunPointEnvironmentModeEv [4] [7] 23.9 0.00 15.28 869 ._ZN8CProteinC1EPKc [7] 0.11 15.17 869/869 ._ZN8CProtein11ReadPDBFileEPKc [8] 0.01 0.00 3476/5214 ._ZN8CObArrayC1Ev [198] 0.00 0.00 869/869 ._ZN10CAtomArrayC2Ev [265] ----------------------------------------------- 0.11 15.17 869/869 ._ZN8CProteinC1EPKc [7] [8] 23.9 0.11 15.17 869 ._ZN8CProtein11ReadPDBFileEPKc [8] 11.42 0.00 2503507/2503507 ._ZN11CLISPParser7GetLineEPc [9] 0.16 3.58 2502638/2502638 ._ZN8CProtein12ParsePDBLineEPKc [12] 0.01 0.00 869/869 ._ZN11CLISPParserD1Ev [260] 0.00 0.00 869/869 ._ZN11CLISPParserC1EPKc [455] ----------------------------------------------- 11.42 0.00 2503507/2503507 ._ZN8CProtein11ReadPDBFileEPKc [8] [9] 17.8 11.42 0.00 2503507 ._ZN11CLISPParser7GetLineEPc [9] ----------------------------------------------- 0.00 5.15 869/869 ._ZN9Featurize23RunPointEnvironmentModeEv [4] [10] 8.0 0.00 5.15 869 ._ZN13CNeighborhoodC1EP10CAtomArrayd [10] 0.81 4.08 869/869 ._ZN8NeighborC1EPK11SuperVectorIP8SPoint3DEf [11] 0.02 0.24 869/869 ._ZN13CNeighborhood17GeneratePointListEP10CAtomArray [52] ----------------------------------------------- 0.81 4.08 869/869 ._ZN13CNeighborhoodC1EP10CAtomArrayd [10] [11] 7.6 0.81 4.08 869 ._ZN8NeighborC1EPK11SuperVectorIP8SPoint3DEf [11] 0.07 1.89 1487233/1525962 ._ZN12SuperHashMapIN8Neighbor4CellEP11SuperVectorIiENS1_4HashENS1_5EqualEEixERKS1_ [16] 0.07 1.26 1387918/1435816 ._ZNK12SuperHashMapIN8Neighbor4CellEP11SuperVectorIiENS1_4HashENS1_5EqualEE6hasKeyERKS1_ [23] 0.05 0.45 1387918/1387918 ._ZNSt6vectorIiSaIiEE9push_backERKi [35] 0.08 0.01 1388787/1399133 ._ZNKSt6vectorIP8SPoint3DSaIS1_EE3endEv [95] 0.05 0.02 1388787/1388787 ._ZN9__gnu_cxxneIPKP8SPoint3DSt6vectorIS2_SaIS2_EEEEbRKNS_17__normal_iteratorIT_T0_EESD_ [112] 0.00 0.06 869/869 ._ZN12SuperHashMapIN8Neighbor4CellEP11SuperVectorIiENS1_4HashENS1_5EqualEEC1Ev [119] 0.03 0.01 1387918/1387918 ._ZN9__gnu_cxx17__normal_iteratorIPKP8SPoint3DSt6vectorIS2_SaIS2_EEEppEi [144] 0.01 0.02 99315/101089 ._ZN11SuperVectorIiEC1Ev [151] 0.01 0.00 1387918/1387918 ._ZNK9__gnu_cxx17__normal_iteratorIPKP8SPoint3DSt6vectorIS2_SaIS2_EEEdeEv [204] 0.00 0.00 869/11215 ._ZNKSt6vectorIP8SPoint3DSaIS1_EE5beginEv [283] 0.00 0.00 1387918/1437590 ._ZN8Neighbor4CellC1Eiii [298] ----------------------------------------------- 0.16 3.58 2502638/2502638 ._ZN8CProtein11ReadPDBFileEPKc [8] [12] 5.8 0.16 3.58 2502638 ._ZN8CProtein12ParsePDBLineEPKc [12] 0.19 2.76 1443367/1443367 ._ZN8CProtein9ParseAtomEPKc [14] 0.62 0.00 2502638/6669577 ._Z11ParseStringPcPKcii [20] 0.01 0.00 787/787 ._ZN8CProtein12ParseHetAtomEPKc [192] 0.00 0.00 869/869 ._ZN8CProtein11ParseHeaderEPKc [276] ----------------------------------------------- 0.02 0.00 1387918/199200745 ._ZN10CAtomArrayD1Ev [50] 0.02 0.00 1387918/199200745 ._ZN10CAtomArray18ExtractMarkedAtomsEi [33] 0.02 0.00 1388690/199200745 ._ZN10CAtomArrayD2Ev [55] 0.02 0.00 1388690/199200745 ._ZN8CProteinD1Ev [36] 0.06 0.00 3528536/199200745 ._ZN10CAtomArray7GetAtomEi [66] 3.23 0.00 190118993/199200745 ._ZN8CProtein13ParseDSSPLineEPKc [5] [13] 5.3 3.38 0.00 199200745 ._ZNK8CObArray5GetAtEi [13] ----------------------------------------------- 0.19 2.76 1443367/1443367 ._ZN8CProtein12ParsePDBLineEPKc [12] [14] 4.6 0.19 2.76 1443367 ._ZN8CProtein9ParseAtomEPKc [14] 0.32 1.70 1443367/1444154 ._ZN5SAtom12ParsePDBAtomEPKc [15] 0.14 0.38 1387918/2776608 ._ZN10CAtomArray7AddAtomEP5SAtomb [28] 0.05 0.17 1387918/4165298 ._ZN8CObArray3AddEP7CObject [32] ----------------------------------------------- 0.00 0.00 787/1444154 ._ZN8CProtein12ParseHetAtomEPKc [192] 0.32 1.70 1443367/1444154 ._ZN8CProtein9ParseAtomEPKc [14] [15] 3.2 0.32 1.70 1444154 ._ZN5SAtom12ParsePDBAtomEPKc [15] 1.04 0.00 4166070/6669577 ._Z11ParseStringPcPKcii [20] 0.22 0.00 6943450/6943450 ._Z11ParseDoublePdPKcii [56] 0.17 0.00 4166070/4700304 ._Z9ParseCharPcPKci [62] 0.06 0.07 1388690/4165298 ._ZN5SAtomC1Ev [42] 0.08 0.00 1388690/1388690 ._ZN5SAtom22SetResidueFullSequenceEPS_ [107] 0.07 0.00 2777380/3133536 ._Z9ParseLongPlPKcii [106] ----------------------------------------------- 0.00 0.05 38729/1525962 ._ZN8Neighbor12GetNeighborsERK8SPoint3D [59] 0.07 1.89 1487233/1525962 ._ZN8NeighborC1EPK11SuperVectorIP8SPoint3DEf [11] [16] 3.1 0.07 1.94 1525962 ._ZN12SuperHashMapIN8Neighbor4CellEP11SuperVectorIiENS1_4HashENS1_5EqualEEixERKS1_ [16] 0.03 1.87 1525962/1525962 ._ZN9__gnu_cxx8hash_mapIN8Neighbor4CellEP11SuperVectorIiENS2_4HashENS2_5EqualESaIS5_EE6insertERKSt4pairIKS2_S5_E [17] 0.02 0.00 1525962/1525962 ._ZNSt4pairIKN8Neighbor4CellEP11SuperVectorIiEEC1IS1_S5_EERKS_IT_T0_E [165] 0.01 0.00 1525962/1525962 ._ZNSt4pairIN8Neighbor4CellEP11SuperVectorIiEEC1ERKS1_RKS4_ [202] 0.01 0.00 1525962/1625277 ._ZNK9__gnu_cxx19_Hashtable_iteratorISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EEdeEv [201] ----------------------------------------------- 0.03 1.87 1525962/1525962 ._ZN12SuperHashMapIN8Neighbor4CellEP11SuperVectorIiENS1_4HashENS1_5EqualEEixERKS1_ [16] [17] 3.0 0.03 1.87 1525962 ._ZN9__gnu_cxx8hash_mapIN8Neighbor4CellEP11SuperVectorIiENS2_4HashENS2_5EqualESaIS5_EE6insertERKSt4pairIKS2_S5_E [17] 0.03 1.84 1525962/1525962 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE13insert_uniqueERKS8_ [18] ----------------------------------------------- 0.03 1.84 1525962/1525962 ._ZN9__gnu_cxx8hash_mapIN8Neighbor4CellEP11SuperVectorIiENS2_4HashENS2_5EqualESaIS5_EE6insertERKSt4pairIKS2_S5_E [17] [18] 2.9 0.03 1.84 1525962 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE13insert_uniqueERKS8_ [18] 0.20 1.27 1525962/1525962 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE22insert_unique_noresizeERKS8_ [22] 0.08 0.28 1525962/1525962 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE6resizeEm [43] ----------------------------------------------- 0.08 0.76 1435816/3033923 ._ZNK9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE4findERS4_ [25] 0.08 0.85 1598107/3033923 ._ZNK9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE10_M_bkt_numERKS8_ [29] [19] 2.8 0.16 1.62 3033923 ._ZNK9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE14_M_bkt_num_keyERS4_ [19] 0.37 0.74 3033923/3054393 ._ZNK9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE14_M_bkt_num_keyERS4_m [26] 0.16 0.35 3033923/4939382 ._ZNKSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE4sizeEv [30] ----------------------------------------------- 0.00 0.00 869/6669577 ._ZN8CProtein11ParseHeaderEPKc [276] 0.62 0.00 2502638/6669577 ._ZN8CProtein12ParsePDBLineEPKc [12] 1.04 0.00 4166070/6669577 ._ZN5SAtom12ParsePDBAtomEPKc [15] [20] 2.6 1.66 0.00 6669577 ._Z11ParseStringPcPKcii [20] ----------------------------------------------- 0.07 1.51 751928/751928 ._ZN9Featurize23RunPointEnvironmentModeEv [4] [21] 2.5 0.07 1.51 751928 ._ZN15SAtomProperties23CalculateAtomPropertiesEP5SAtom [21] 0.11 0.19 751928/751928 ._ZN5SAtom17GetHydrophobicityEv [49] 0.10 0.10 751928/751928 ._ZN15SAtomProperties16SetChargeWithHisEP5SAtom [61] 0.03 0.14 751928/751928 ._ZN15SAtomProperties12SetVDWVolumeEP5SAtom [65] 0.06 0.10 751928/751928 ._ZN15SAtomProperties12SetPosChargeEP5SAtom [67] 0.13 0.00 751928/751928 ._ZN15SAtomProperties14SetResidueNameEP5SAtom [79] 0.13 0.00 751928/751928 ._ZN15SAtomProperties7SetTypeEP5SAtom [80] 0.02 0.10 751928/751928 ._ZN15SAtomProperties12SetNegChargeEP5SAtom [83] 0.09 0.01 751928/2987080 ._ZN5SAtom9GetChargeEv [40] 0.07 0.00 751928/751928 ._ZN15SAtomProperties16SetPartialChargeEP5SAtom [109] 0.07 0.00 751928/751928 ._ZN8SPoint3DaSERKS_ [111] 0.06 0.00 751928/751928 ._ZN15SAtomProperties18SetFunctionalGroupEP5SAtom [116] 0.00 0.00 751928/751928 ._ZN15SAtomProperties7SetNameEP5SAtom [303] ----------------------------------------------- 0.20 1.27 1525962/1525962 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE13insert_uniqueERKS8_ [18] [22] 2.3 0.20 1.27 1525962 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE22insert_unique_noresizeERKS8_ [22] 0.01 0.90 1525962/1598107 ._ZNK9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE10_M_bkt_numERKS8_ [29] 0.10 0.13 1625277/2293831 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EEixEm [47] 0.04 0.00 1656466/3219284 ._ZNK8Neighbor4Cell5EqualclERKS0_S3_ [105] 0.03 0.00 1656466/1656466 ._ZNKSt10_Select1stISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEclERS7_ [150] 0.01 0.01 99315/99315 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE11_M_new_nodeERKS8_ [156] 0.02 0.00 1525962/1525962 ._ZNSt4pairIN9__gnu_cxx19_Hashtable_iteratorIS_IKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EEEbEC1ERKSE_RKb [166] 0.02 0.00 1525962/1627015 ._ZN9__gnu_cxx19_Hashtable_iteratorISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EEC1EPNS_15_Hashtable_nodeIS8_EEPNS_9hashtableIS8_S3_S9_SB_SC_SD_EE [164] 0.01 0.00 1656466/4837861 ._ZNKSt10_Select1stISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEclERKS7_ [160] ----------------------------------------------- 0.00 0.04 47898/1435816 ._ZN8Neighbor12GetNeighborsERK8SPoint3D [59] 0.07 1.26 1387918/1435816 ._ZN8NeighborC1EPK11SuperVectorIP8SPoint3DEf [11] [23] 2.1 0.07 1.30 1435816 ._ZNK12SuperHashMapIN8Neighbor4CellEP11SuperVectorIiENS1_4HashENS1_5EqualEE6hasKeyERKS1_ [23] 0.04 1.20 1435816/1435816 ._ZNK9__gnu_cxx8hash_mapIN8Neighbor4CellEP11SuperVectorIiENS2_4HashENS2_5EqualESaIS5_EE4findERKS2_ [24] 0.02 0.02 1435816/1435816 ._ZNK9__gnu_cxx8hash_mapIN8Neighbor4CellEP11SuperVectorIiENS2_4HashENS2_5EqualESaIS5_EE3endEv [139] 0.02 0.00 1435816/1435816 ._ZNK9__gnu_cxx25_Hashtable_const_iteratorISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EEneERKSE_ [167] ----------------------------------------------- 0.04 1.20 1435816/1435816 ._ZNK12SuperHashMapIN8Neighbor4CellEP11SuperVectorIiENS1_4HashENS1_5EqualEE6hasKeyERKS1_ [23] [24] 1.9 0.04 1.20 1435816 ._ZNK9__gnu_cxx8hash_mapIN8Neighbor4CellEP11SuperVectorIiENS2_4HashENS2_5EqualESaIS5_EE4findERKS2_ [24] 0.09 1.11 1435816/1435816 ._ZNK9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE4findERS4_ [25] ----------------------------------------------- 0.09 1.11 1435816/1435816 ._ZNK9__gnu_cxx8hash_mapIN8Neighbor4CellEP11SuperVectorIiENS2_4HashENS2_5EqualESaIS5_EE4findERKS2_ [24] [25] 1.9 0.09 1.11 1435816 ._ZNK9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE4findERS4_ [25] 0.08 0.76 1435816/3033923 ._ZNK9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE14_M_bkt_num_keyERS4_ [19] 0.07 0.16 1435816/1435816 ._ZNKSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EEixEm [54] 0.04 0.00 1562818/3219284 ._ZNK8Neighbor4Cell5EqualclERKS0_S3_ [105] 0.01 0.00 1562818/4837861 ._ZNKSt10_Select1stISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEclERKS7_ [160] 0.00 0.00 1435816/2871632 ._ZN9__gnu_cxx25_Hashtable_const_iteratorISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EEC1EPKNS_15_Hashtable_nodeIS8_EEPKNS_9hashtableIS8_S3_S9_SB_SC_SD_EE [297] ----------------------------------------------- 0.00 0.00 20470/3054393 ._ZNK9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE10_M_bkt_numERKS8_m [253] 0.37 0.74 3033923/3054393 ._ZNK9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE14_M_bkt_num_keyERS4_ [19] [26] 1.7 0.37 0.74 3054393 ._ZNK9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE14_M_bkt_num_keyERS4_m [26] 0.28 0.46 3054393/3054393 ._ZNK8Neighbor4Cell4HashclERKS0_ [31] ----------------------------------------------- 0.00 1.10 869/869 ._ZN9Featurize23RunPointEnvironmentModeEv [4] [27] 1.7 0.00 1.10 869 ._Z22GetNonExcludedResiduesP10CAtomArrayR7StrList [27] 0.08 0.55 869/869 ._ZN10CAtomArray18ExtractMarkedAtomsEi [33] 0.37 0.10 869/869 ._Z10MarkHetatmP10CAtomArray [37] 0.00 0.00 1738/8320 ._ZNSt6vectorIPcSaIS0_EE3endEv [390] 0.00 0.00 1738/8290 ._ZN9__gnu_cxxneIPPcSt6vectorIS1_SaIS1_EEEEbRKNS_17__normal_iteratorIT_T0_EESB_ [391] 0.00 0.00 869/869 ._ZN9__gnu_cxx17__normal_iteratorIPPcSt6vectorIS1_SaIS1_EEEC1Ev [468] 0.00 0.00 869/7435 ._ZNSt6vectorIPcSaIS0_EE5beginEv [392] 0.00 0.00 869/13968 ._ZNK9__gnu_cxx17__normal_iteratorIPPcSt6vectorIS1_SaIS1_EEEdeEv [364] 0.00 0.00 869/7419 ._ZN9__gnu_cxx17__normal_iteratorIPPcSt6vectorIS1_SaIS1_EEEppEi [393] ----------------------------------------------- 0.00 0.00 772/2776608 ._ZN8CProtein12ParseHetAtomEPKc [192] 0.14 0.38 1387918/2776608 ._ZN10CAtomArray18ExtractMarkedAtomsEi [33] 0.14 0.38 1387918/2776608 ._ZN8CProtein9ParseAtomEPKc [14] [28] 1.6 0.29 0.76 2776608 ._ZN10CAtomArray7AddAtomEP5SAtomb [28] 0.09 0.33 2776608/4165298 ._ZN8CObArray3AddEP7CObject [32] 0.11 0.13 2776608/4165298 ._ZN5SAtomC1Ev [42] 0.07 0.00 2776608/2776608 ._ZN5SAtomaSERS_ [110] 0.02 0.00 2776608/7881471 ._ZN8CObArray7GetSizeEv [115] ----------------------------------------------- 0.00 0.04 72145/1598107 ._ZN9__gnu_cxx19_Hashtable_iteratorISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EEppEv [84] 0.01 0.90 1525962/1598107 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE22insert_unique_noresizeERKS8_ [22] [29] 1.5 0.01 0.94 1598107 ._ZNK9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE10_M_bkt_numERKS8_ [29] 0.08 0.85 1598107/3033923 ._ZNK9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE14_M_bkt_num_keyERS4_ [19] 0.01 0.00 1598107/4837861 ._ZNKSt10_Select1stISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEclERKS7_ [160] ----------------------------------------------- 0.00 0.00 869/4939382 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE7reserveEm [128] 0.00 0.00 3893/4939382 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE5beginEv [267] 0.01 0.02 185421/4939382 ._ZN9__gnu_cxx19_Hashtable_iteratorISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EEppEv [84] 0.01 0.02 189314/4939382 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE5clearEv [88] 0.08 0.18 1525962/4939382 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE6resizeEm [43] 0.16 0.35 3033923/4939382 ._ZNK9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE14_M_bkt_num_keyERS4_ [19] [30] 1.3 0.26 0.57 4939382 ._ZNKSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE4sizeEv [30] 0.16 0.05 4939382/4940251 ._ZN9__gnu_cxxmiIPKPNS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESD_St6vectorISB_SaISB_EEEENS_17__normal_iteratorIT_T1_E15difference_typeERKSK_RKNSH_IT0_SJ_EE [58] 0.14 0.04 4939382/4939382 ._ZNKSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE3endEv [63] 0.14 0.04 4939382/6376067 ._ZNKSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE5beginEv [53] ----------------------------------------------- 0.28 0.46 3054393/3054393 ._ZNK9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE14_M_bkt_num_keyERS4_m [26] [31] 1.2 0.28 0.46 3054393 ._ZNK8Neighbor4Cell4HashclERKS0_ [31] 0.43 0.03 9163179/9163179 ._ZNK9SuperHashIiEclERKi [38] ----------------------------------------------- 0.00 0.00 772/4165298 ._ZN8CProtein12ParseHetAtomEPKc [192] 0.05 0.17 1387918/4165298 ._ZN8CProtein9ParseAtomEPKc [14] 0.09 0.33 2776608/4165298 ._ZN10CAtomArray7AddAtomEP5SAtomb [28] [32] 1.0 0.14 0.50 4165298 ._ZN8CObArray3AddEP7CObject [32] 0.16 0.34 4165298/4165298 ._ZN8CObArray9SetAtGrowEiP7CObject [34] ----------------------------------------------- 0.08 0.55 869/869 ._Z22GetNonExcludedResiduesP10CAtomArrayR7StrList [27] [33] 1.0 0.08 0.55 869 ._ZN10CAtomArray18ExtractMarkedAtomsEi [33] 0.14 0.38 1387918/2776608 ._ZN10CAtomArray7AddAtomEP5SAtomb [28] 0.02 0.00 1387918/199200745 ._ZNK8CObArray5GetAtEi [13] 0.00 0.00 869/869 ._ZN10CAtomArrayC1Ev [264] 0.00 0.00 869/7881471 ._ZN8CObArray7GetSizeEv [115] ----------------------------------------------- 0.16 0.34 4165298/4165298 ._ZN8CObArray3AddEP7CObject [32] [34] 0.8 0.16 0.34 4165298 ._ZN8CObArray9SetAtGrowEiP7CObject [34] 0.34 0.00 4165298/4165298 ._ZN8CObArray7SetSizeEii [46] ----------------------------------------------- 0.05 0.45 1387918/1387918 ._ZN8NeighborC1EPK11SuperVectorIP8SPoint3DEf [11] [35] 0.8 0.05 0.45 1387918 ._ZNSt6vectorIiSaIiEE9push_backERKi [35] 0.07 0.32 446308/446308 ._ZNSt6vectorIiSaIiEE13_M_insert_auxEN9__gnu_cxx17__normal_iteratorIPiS1_EERKi [41] 0.04 0.01 941610/1387918 ._ZSt10_ConstructIiiEvPT_RKT0_ [104] 0.00 0.00 446308/996994 ._ZNSt6vectorIiSaIiEE3endEv [183] ----------------------------------------------- 0.14 0.35 869/869 ._ZN9Featurize23RunPointEnvironmentModeEv [4] [36] 0.8 0.14 0.35 869 ._ZN8CProteinD1Ev [36] 0.10 0.12 869/869 ._ZN10CAtomArrayD2Ev [55] 0.03 0.07 1388690/4165298 ._ZN5SAtomD1Ev [48] 0.02 0.00 1388690/199200745 ._ZNK8CObArray5GetAtEi [13] 0.00 0.00 3476/7881471 ._ZN8CObArray7GetSizeEv [115] 0.00 0.00 3476/5214 ._ZN8CObArrayD1Ev [287] ----------------------------------------------- 0.37 0.10 869/869 ._Z22GetNonExcludedResiduesP10CAtomArrayR7StrList [27] [37] 0.7 0.37 0.10 869 ._Z10MarkHetatmP10CAtomArray [37] 0.03 0.03 1388690/3528536 ._ZN10CAtomArray7GetAtomEi [66] 0.02 0.01 1389559/1392166 ._ZN10CAtomArray8NumAtomsEv [147] 0.00 0.00 869/639603 ._Z5debugiPcz [304] 0.00 0.00 772/772 ._ZN10CAtomArray11DecAtomMarkEi [492] ----------------------------------------------- 0.43 0.03 9163179/9163179 ._ZNK8Neighbor4Cell4HashclERKS0_ [31] [38] 0.7 0.43 0.03 9163179 ._ZNK9SuperHashIiEclERKi [38] 0.03 0.00 9163179/9163179 ._ZNK9__gnu_cxx4hashIiEclEi [148] ----------------------------------------------- [39] 0.6 0.40 0.00 ._ZN8CObArray9RemoveAllEv [39] ----------------------------------------------- 0.09 0.01 731296/2987080 ._ZN15SAtomProperties16SetChargeWithHisEP5SAtom [61] 0.09 0.01 751928/2987080 ._ZN15SAtomProperties12SetNegChargeEP5SAtom [83] 0.09 0.01 751928/2987080 ._ZN15SAtomProperties12SetPosChargeEP5SAtom [67] 0.09 0.01 751928/2987080 ._ZN15SAtomProperties23CalculateAtomPropertiesEP5SAtom [21] [40] 0.6 0.35 0.05 2987080 ._ZN5SAtom9GetChargeEv [40] 0.05 0.00 492292/2201943 ._Z10IsStringInPKcS0_ [57] ----------------------------------------------- 0.07 0.32 446308/446308 ._ZNSt6vectorIiSaIiEE9push_backERKi [35] [41] 0.6 0.07 0.32 446308 ._ZNSt6vectorIiSaIiEE13_M_insert_auxEN9__gnu_cxx17__normal_iteratorIPiS1_EERKi [41] 0.07 0.03 446308/459891 ._ZNKSt6vectorIiSaIiEE4sizeEv [89] 0.00 0.09 892616/928043 ._ZSt18uninitialized_copyIN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEES6_ET0_T_S8_S7_ [91] 0.04 0.00 446308/446308 ._ZN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEppEv [141] 0.02 0.01 446308/1387918 ._ZSt10_ConstructIiiEvPT_RKT0_ [104] 0.01 0.00 1785232/5001984 ._ZNK9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEE4baseEv [137] 0.01 0.00 1338924/5342121 ._ZN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEC1ERKS1_ [136] 0.01 0.00 446308/446308 ._ZSt8_DestroyIN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEEEvT_S7_ [209] 0.00 0.01 446308/458117 ._ZNSt12_Vector_baseIiSaIiEE11_M_allocateEm [208] 0.00 0.00 446308/996994 ._ZNSt6vectorIiSaIiEE3endEv [183] 0.00 0.00 446308/1236965 ._ZNSt6vectorIiSaIiEE5beginEv [180] 0.00 0.00 446308/559206 ._ZNSt12_Vector_baseIiSaIiEE13_M_deallocateEPim [305] ----------------------------------------------- 0.06 0.07 1388690/4165298 ._ZN5SAtom12ParsePDBAtomEPKc [15] 0.11 0.13 2776608/4165298 ._ZN10CAtomArray7AddAtomEP5SAtomb [28] [42] 0.6 0.17 0.20 4165298 ._ZN5SAtomC1Ev [42] 0.11 0.03 4165298/4167036 ._ZN14CProteinObjectC2Ev [74] 0.03 0.03 4165298/4917226 ._ZN8SPoint3DC1Ev [113] ----------------------------------------------- 0.08 0.28 1525962/1525962 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE13insert_uniqueERKS8_ [18] [43] 0.6 0.08 0.28 1525962 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE6resizeEm [43] 0.08 0.18 1525962/4939382 ._ZNKSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE4sizeEv [30] 0.01 0.01 102350/2293831 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EEixEm [47] 0.00 0.01 20470/20470 ._ZNK9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE10_M_bkt_numERKS8_m [253] 0.00 0.00 102/971 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EED1Ev [146] 0.00 0.00 102/971 ._ZNK9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE12_M_next_sizeEm [444] 0.00 0.00 102/102 ._ZNKSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE13get_allocatorEv [495] 0.00 0.00 102/102 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EEC1EmRKSB_RKSC_ [499] 0.00 0.00 102/971 ._ZNSaIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEED1Ev [446] 0.00 0.00 102/102 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE4swapERSD_ [498] ----------------------------------------------- 0.00 0.36 869/869 ._ZN9Featurize23RunPointEnvironmentModeEv [4] [44] 0.6 0.00 0.36 869 ._ZN13CNeighborhoodD1Ev [44] 0.02 0.34 869/869 ._ZN8NeighborD1Ev [45] 0.00 0.00 869/869 ._ZN11SuperVectorIP8SPoint3DED1Ev [457] ----------------------------------------------- 0.02 0.34 869/869 ._ZN13CNeighborhoodD1Ev [44] [45] 0.6 0.02 0.34 869 ._ZN8NeighborD1Ev [45] 0.00 0.15 869/869 ._ZN12SuperHashMapIN8Neighbor4CellEP11SuperVectorIiENS1_4HashENS1_5EqualEED1Ev [71] 0.01 0.12 99315/99315 ._ZN9__gnu_cxx19_Hashtable_iteratorISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EEppEi [78] 0.00 0.05 99315/101089 ._ZN11SuperVectorIiED1Ev [123] 0.00 0.00 869/869 ._ZN9__gnu_cxx8hash_mapIN8Neighbor4CellEP11SuperVectorIiENS2_4HashENS2_5EqualESaIS5_EE5beginEv [266] 0.00 0.00 100184/100184 ._ZN9__gnu_cxx8hash_mapIN8Neighbor4CellEP11SuperVectorIiENS2_4HashENS2_5EqualESaIS5_EE3endEv [268] 0.00 0.00 99315/1625277 ._ZNK9__gnu_cxx19_Hashtable_iteratorISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EEdeEv [201] 0.00 0.00 100184/100184 ._ZNK9__gnu_cxx19_Hashtable_iteratorISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EEneERKSE_ [326] ----------------------------------------------- 0.34 0.00 4165298/4165298 ._ZN8CObArray9SetAtGrowEiP7CObject [34] [46] 0.5 0.34 0.00 4165298 ._ZN8CObArray7SetSizeEii [46] ----------------------------------------------- 0.00 0.00 4762/2293831 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE5beginEv [267] 0.01 0.01 102350/2293831 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE6resizeEm [43] 0.01 0.01 184552/2293831 ._ZN9__gnu_cxx19_Hashtable_iteratorISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EEppEv [84] 0.02 0.03 376890/2293831 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE5clearEv [88] 0.10 0.13 1625277/2293831 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE22insert_unique_noresizeERKS8_ [22] [47] 0.5 0.14 0.18 2293831 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EEixEm [47] 0.08 0.02 2293831/2293831 ._ZNK9__gnu_cxx17__normal_iteratorIPPNS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESt6vectorISB_SaISB_EEEplERKl [90] 0.04 0.02 2293831/2293831 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE5beginEv [118] 0.02 0.00 2293831/2293831 ._ZNK9__gnu_cxx17__normal_iteratorIPPNS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESt6vectorISB_SaISB_EEEdeEv [163] ----------------------------------------------- 0.03 0.07 1387918/4165298 ._ZN10CAtomArrayD1Ev [50] 0.03 0.07 1388690/4165298 ._ZN10CAtomArrayD2Ev [55] 0.03 0.07 1388690/4165298 ._ZN8CProteinD1Ev [36] [48] 0.5 0.09 0.21 4165298 ._ZN5SAtomD1Ev [48] 0.14 0.01 4165298/4167036 ._ZN14CProteinObjectD2Ev [70] 0.05 0.01 4165298/4931234 ._ZN8SPoint3DD1Ev [108] ----------------------------------------------- 0.11 0.19 751928/751928 ._ZN15SAtomProperties23CalculateAtomPropertiesEP5SAtom [21] [49] 0.5 0.11 0.19 751928 ._ZN5SAtom17GetHydrophobicityEv [49] 0.02 0.08 751928/751928 ._ZN5SAtom10IsBackboneEv [94] 0.09 0.00 920409/2201943 ._Z10IsStringInPKcS0_ [57] 0.00 0.00 85/243 ._Z9IsVerbosev [494] ----------------------------------------------- 0.15 0.12 869/869 ._ZN9Featurize23RunPointEnvironmentModeEv [4] [50] 0.4 0.15 0.12 869 ._ZN10CAtomArrayD1Ev [50] 0.03 0.07 1387918/4165298 ._ZN5SAtomD1Ev [48] 0.02 0.00 1387918/199200745 ._ZNK8CObArray5GetAtEi [13] 0.00 0.00 869/4167036 ._ZN14CProteinObjectD2Ev [70] 0.00 0.00 869/7881471 ._ZN8CObArray7GetSizeEv [115] 0.00 0.00 869/5214 ._ZN8CObArrayD1Ev [287] ----------------------------------------------- 0.27 0.00 1388585/1388585 ._ZN8CProtein13ParseDSSPLineEPKc [5] [51] 0.4 0.27 0.00 1388585 ._Z17ConvertStructCodec [51] ----------------------------------------------- 0.02 0.24 869/869 ._ZN13CNeighborhoodC1EP10CAtomArrayd [10] [52] 0.4 0.02 0.24 869 ._ZN13CNeighborhood17GeneratePointListEP10CAtomArray [52] 0.02 0.16 1387918/1387918 ._ZNSt6vectorIP8SPoint3DSaIS1_EE9push_backERKS1_ [64] 0.03 0.03 1387918/3528536 ._ZN10CAtomArray7GetAtomEi [66] 0.00 0.00 869/1392166 ._ZN10CAtomArray8NumAtomsEv [147] 0.00 0.00 869/869 ._ZN11SuperVectorIP8SPoint3DEC1Ev [456] ----------------------------------------------- 0.00 0.00 869/6376067 ._ZNKSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE8capacityEv [286] 0.04 0.01 1435816/6376067 ._ZNKSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EEixEm [54] 0.14 0.04 4939382/6376067 ._ZNKSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE4sizeEv [30] [53] 0.4 0.18 0.06 6376067 ._ZNKSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE5beginEv [53] 0.06 0.00 6376067/12752134 ._ZN9__gnu_cxx17__normal_iteratorIPKPNS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESt6vectorISB_SaISB_EEEC1ERKSD_ [85] ----------------------------------------------- 0.07 0.16 1435816/1435816 ._ZNK9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE4findERS4_ [25] [54] 0.4 0.07 0.16 1435816 ._ZNKSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EEixEm [54] 0.08 0.01 1435816/1435816 ._ZNK9__gnu_cxx17__normal_iteratorIPKPNS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESt6vectorISB_SaISB_EEEplERKl [99] 0.04 0.01 1435816/6376067 ._ZNKSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE5beginEv [53] 0.01 0.00 1435816/1435816 ._ZNK9__gnu_cxx17__normal_iteratorIPKPNS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESt6vectorISB_SaISB_EEEdeEv [203] ----------------------------------------------- 0.10 0.12 869/869 ._ZN8CProteinD1Ev [36] [55] 0.4 0.10 0.12 869 ._ZN10CAtomArrayD2Ev [55] 0.03 0.07 1388690/4165298 ._ZN5SAtomD1Ev [48] 0.02 0.00 1388690/199200745 ._ZNK8CObArray5GetAtEi [13] 0.00 0.00 869/4167036 ._ZN14CProteinObjectD2Ev [70] 0.00 0.00 869/7881471 ._ZN8CObArray7GetSizeEv [115] 0.00 0.00 869/5214 ._ZN8CObArrayD1Ev [287] ----------------------------------------------- 0.22 0.00 6943450/6943450 ._ZN5SAtom12ParsePDBAtomEPKc [15] [56] 0.3 0.22 0.00 6943450 ._Z11ParseDoublePdPKcii [56] ----------------------------------------------- 0.00 0.00 37314/2201943 ._ZN15SAtomProperties16SetChargeWithHisEP5SAtom [61] 0.05 0.00 492292/2201943 ._ZN5SAtom9GetChargeEv [40] 0.08 0.00 751928/2201943 ._ZN5SAtom10IsBackboneEv [94] 0.09 0.00 920409/2201943 ._ZN5SAtom17GetHydrophobicityEv [49] [57] 0.3 0.22 0.00 2201943 ._Z10IsStringInPKcS0_ [57] ----------------------------------------------- 0.00 0.00 869/4940251 ._ZNKSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE8capacityEv [286] 0.16 0.05 4939382/4940251 ._ZNKSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE4sizeEv [30] [58] 0.3 0.16 0.05 4940251 ._ZN9__gnu_cxxmiIPKPNS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESD_St6vectorISB_SaISB_EEEENS_17__normal_iteratorIT_T1_E15difference_typeERKSK_RKNSH_IT0_SJ_EE [58] 0.05 0.00 9880502/9880502 ._ZNK9__gnu_cxx17__normal_iteratorIPKPNS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESt6vectorISB_SaISB_EEE4baseEv [126] ----------------------------------------------- 1 ._ZN8Neighbor12GetNeighborsERK8SPoint3D [59] 0.00 0.00 1/1775 .atexit [1] 0.01 0.19 1774/1775 ._ZN13CNeighborhood18GetNeighborIndexesERK8SPoint3D [60] [59] 0.3 0.01 0.19 1775+1 ._ZN8Neighbor12GetNeighborsERK8SPoint3D [59] 0.00 0.10 38729/38729 ._ZN11SuperVectorIiE6extendERS0_ [93] 0.00 0.05 38729/1525962 ._ZN12SuperHashMapIN8Neighbor4CellEP11SuperVectorIiENS1_4HashENS1_5EqualEEixERKS1_ [16] 0.00 0.04 47898/1435816 ._ZNK12SuperHashMapIN8Neighbor4CellEP11SuperVectorIiENS1_4HashENS1_5EqualEE6hasKeyERKS1_ [23] 0.00 0.00 1774/101089 ._ZN11SuperVectorIiEC1Ev [151] 0.00 0.00 49672/1437590 ._ZN8Neighbor4CellC1Eiii [298] 1 ._ZN8Neighbor12GetNeighborsERK8SPoint3D [59] ----------------------------------------------- 0.00 0.20 1774/1774 ._ZN9Featurize23RunPointEnvironmentModeEv [4] [60] 0.3 0.00 0.20 1774 ._ZN13CNeighborhood18GetNeighborIndexesERK8SPoint3D [60] 0.01 0.19 1774/1775 ._ZN8Neighbor12GetNeighborsERK8SPoint3D [59] ----------------------------------------------- 0.10 0.10 751928/751928 ._ZN15SAtomProperties23CalculateAtomPropertiesEP5SAtom [21] [61] 0.3 0.10 0.10 751928 ._ZN15SAtomProperties16SetChargeWithHisEP5SAtom [61] 0.09 0.01 731296/2987080 ._ZN5SAtom9GetChargeEv [40] 0.00 0.00 37314/2201943 ._Z10IsStringInPKcS0_ [57] ----------------------------------------------- 0.02 0.00 534234/4700304 ._ZN8CProtein13ParseDSSPLineEPKc [5] 0.17 0.00 4166070/4700304 ._ZN5SAtom12ParsePDBAtomEPKc [15] [62] 0.3 0.19 0.00 4700304 ._Z9ParseCharPcPKci [62] ----------------------------------------------- 0.14 0.04 4939382/4939382 ._ZNKSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE4sizeEv [30] [63] 0.3 0.14 0.04 4939382 ._ZNKSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE3endEv [63] 0.04 0.00 4939382/12752134 ._ZN9__gnu_cxx17__normal_iteratorIPKPNS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESt6vectorISB_SaISB_EEEC1ERKSD_ [85] ----------------------------------------------- 0.02 0.16 1387918/1387918 ._ZN13CNeighborhood17GeneratePointListEP10CAtomArray [52] [64] 0.3 0.02 0.16 1387918 ._ZNSt6vectorIP8SPoint3DSaIS1_EE9push_backERKS1_ [64] 0.12 0.02 1377572/1387918 ._ZSt10_ConstructIP8SPoint3DS1_EvPT_RKT0_ [76] 0.00 0.02 10346/10346 ._ZNSt6vectorIP8SPoint3DSaIS1_EE13_M_insert_auxEN9__gnu_cxx17__normal_iteratorIPS1_S3_EERKS1_ [184] 0.01 0.00 10346/20692 ._ZNSt6vectorIP8SPoint3DSaIS1_EE3endEv [227] ----------------------------------------------- 0.03 0.14 751928/751928 ._ZN15SAtomProperties23CalculateAtomPropertiesEP5SAtom [21] [65] 0.3 0.03 0.14 751928 ._ZN15SAtomProperties12SetVDWVolumeEP5SAtom [65] 0.14 0.00 751928/751928 ._ZN5SAtom12GetVDWRadiusEv [75] ----------------------------------------------- 0.02 0.02 751928/3528536 ._ZN9Featurize23RunPointEnvironmentModeEv [4] 0.03 0.03 1387918/3528536 ._ZN13CNeighborhood17GeneratePointListEP10CAtomArray [52] 0.03 0.03 1388690/3528536 ._Z10MarkHetatmP10CAtomArray [37] [66] 0.3 0.08 0.09 3528536 ._ZN10CAtomArray7GetAtomEi [66] 0.06 0.00 3528536/199200745 ._ZNK8CObArray5GetAtEi [13] 0.03 0.00 3528536/7881471 ._ZN8CObArray7GetSizeEv [115] ----------------------------------------------- 0.06 0.10 751928/751928 ._ZN15SAtomProperties23CalculateAtomPropertiesEP5SAtom [21] [67] 0.3 0.06 0.10 751928 ._ZN15SAtomProperties12SetPosChargeEP5SAtom [67] 0.09 0.01 751928/2987080 ._ZN5SAtom9GetChargeEv [40] ----------------------------------------------- 0.03 0.13 7418/7418 ._Z19PathFindProteinFilePcPKcS1_PS1_ [69] [68] 0.2 0.03 0.13 7418 ._Z15FindProteinFilePcPKcS1_PS1_ [68] 0.09 0.04 7418/7418 ._Z8FindFilePcPPKcS2_S2_S2_ [82] 0.00 0.00 7418/643540 ._Z12IsFileExistsPKc [140] 0.00 0.00 7418/7418 ._Z8StrLowerPc [394] ----------------------------------------------- 0.00 0.02 869/7418 ._Z12FindDsspFilePcPKcS1_ [181] 0.00 0.14 6549/7418 ._Z11FindPdbFilePcPKcS1_ [73] [69] 0.2 0.00 0.16 7418 ._Z19PathFindProteinFilePcPKcS1_PS1_ [69] 0.03 0.13 7418/7418 ._Z15FindProteinFilePcPKcS1_PS1_ [68] ----------------------------------------------- 0.00 0.00 869/4167036 ._ZN10CAtomArrayD2Ev [55] 0.00 0.00 869/4167036 ._ZN10CAtomArrayD1Ev [50] 0.14 0.01 4165298/4167036 ._ZN5SAtomD1Ev [48] [70] 0.2 0.14 0.01 4167036 ._ZN14CProteinObjectD2Ev [70] 0.01 0.00 4167036/9103484 ._ZN7CObjectD2Ev [149] ----------------------------------------------- 0.00 0.15 869/869 ._ZN8NeighborD1Ev [45] [71] 0.2 0.00 0.15 869 ._ZN12SuperHashMapIN8Neighbor4CellEP11SuperVectorIiENS1_4HashENS1_5EqualEED1Ev [71] 0.02 0.13 869/869 ._ZN9__gnu_cxx8hash_mapIN8Neighbor4CellEP11SuperVectorIiENS2_4HashENS2_5EqualESaIS5_EED2Ev [72] ----------------------------------------------- 0.02 0.13 869/869 ._ZN12SuperHashMapIN8Neighbor4CellEP11SuperVectorIiENS1_4HashENS1_5EqualEED1Ev [71] [72] 0.2 0.02 0.13 869 ._ZN9__gnu_cxx8hash_mapIN8Neighbor4CellEP11SuperVectorIiENS2_4HashENS2_5EqualESaIS5_EED2Ev [72] 0.00 0.13 869/869 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EED1Ev [77] ----------------------------------------------- 0.01 0.14 6549/6549 ._ZN9Featurize23RunPointEnvironmentModeEv [4] [73] 0.2 0.01 0.14 6549 ._Z11FindPdbFilePcPKcS1_ [73] 0.00 0.14 6549/7418 ._Z19PathFindProteinFilePcPKcS1_PS1_ [69] ----------------------------------------------- 0.00 0.00 869/4167036 ._ZN10CAtomArrayC1Ev [264] 0.00 0.00 869/4167036 ._ZN10CAtomArrayC2Ev [265] 0.11 0.03 4165298/4167036 ._ZN5SAtomC1Ev [42] [74] 0.2 0.12 0.03 4167036 ._ZN14CProteinObjectC2Ev [74] 0.03 0.00 4167036/9103484 ._ZN7CObjectC2Ev [114] ----------------------------------------------- 0.14 0.00 751928/751928 ._ZN15SAtomProperties12SetVDWVolumeEP5SAtom [65] [75] 0.2 0.14 0.00 751928 ._ZN5SAtom12GetVDWRadiusEv [75] 0.00 0.00 158/243 ._Z9IsVerbosev [494] ----------------------------------------------- 0.00 0.00 10346/1387918 ._ZNSt6vectorIP8SPoint3DSaIS1_EE13_M_insert_auxEN9__gnu_cxx17__normal_iteratorIPS1_S3_EERKS1_ [184] 0.12 0.02 1377572/1387918 ._ZNSt6vectorIP8SPoint3DSaIS1_EE9push_backERKS1_ [64] [76] 0.2 0.12 0.02 1387918 ._ZSt10_ConstructIP8SPoint3DS1_EvPT_RKT0_ [76] 0.02 0.00 1387918/2902258 ._ZnwmPv [145] ----------------------------------------------- 0.00 0.13 869/869 ._ZN9__gnu_cxx8hash_mapIN8Neighbor4CellEP11SuperVectorIiENS2_4HashENS2_5EqualESaIS5_EED2Ev [72] [77] 0.2 0.00 0.13 869 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EED1Ev [77] 0.00 0.10 869/869 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE5clearEv [88] 0.00 0.03 869/971 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EED1Ev [146] 0.00 0.00 869/869 ._ZNSaIN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEED1Ev [473] ----------------------------------------------- 0.01 0.12 99315/99315 ._ZN8NeighborD1Ev [45] [78] 0.2 0.01 0.12 99315 ._ZN9__gnu_cxx19_Hashtable_iteratorISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EEppEi [78] 0.02 0.10 99315/99315 ._ZN9__gnu_cxx19_Hashtable_iteratorISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EEppEv [84] ----------------------------------------------- 0.13 0.00 751928/751928 ._ZN15SAtomProperties23CalculateAtomPropertiesEP5SAtom [21] [79] 0.2 0.13 0.00 751928 ._ZN15SAtomProperties14SetResidueNameEP5SAtom [79] ----------------------------------------------- 0.13 0.00 751928/751928 ._ZN15SAtomProperties23CalculateAtomPropertiesEP5SAtom [21] [80] 0.2 0.13 0.00 751928 ._ZN15SAtomProperties7SetTypeEP5SAtom [80] ----------------------------------------------- 0.02 0.11 751928/751928 ._ZN9Featurize23RunPointEnvironmentModeEv [4] [81] 0.2 0.02 0.11 751928 ._ZNK8SPoint3D11GetDistanceERKS_ [81] 0.11 0.00 751928/751928 ._ZNK8SPoint3D14GetDistanceSqrERKS_ [86] ----------------------------------------------- 0.09 0.04 7418/7418 ._Z15FindProteinFilePcPKcS1_PS1_ [68] [82] 0.2 0.09 0.04 7418 ._Z8FindFilePcPPKcS2_S2_S2_ [82] 0.02 0.02 629573/643540 ._Z12IsFileExistsPKc [140] 0.00 0.00 636991/639603 ._Z5debugiPcz [304] ----------------------------------------------- 0.02 0.10 751928/751928 ._ZN15SAtomProperties23CalculateAtomPropertiesEP5SAtom [21] [83] 0.2 0.02 0.10 751928 ._ZN15SAtomProperties12SetNegChargeEP5SAtom [83] 0.09 0.01 751928/2987080 ._ZN5SAtom9GetChargeEv [40] ----------------------------------------------- 0.02 0.10 99315/99315 ._ZN9__gnu_cxx19_Hashtable_iteratorISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EEppEi [78] [84] 0.2 0.02 0.10 99315 ._ZN9__gnu_cxx19_Hashtable_iteratorISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EEppEv [84] 0.00 0.04 72145/1598107 ._ZNK9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE10_M_bkt_numERKS8_ [29] 0.01 0.02 185421/4939382 ._ZNKSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE4sizeEv [30] 0.01 0.01 184552/2293831 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EEixEm [47] ----------------------------------------------- 0.00 0.00 869/12752134 ._ZNKSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE8capacityEv [286] 0.01 0.00 1435816/12752134 ._ZNK9__gnu_cxx17__normal_iteratorIPKPNS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESt6vectorISB_SaISB_EEEplERKl [99] 0.04 0.00 4939382/12752134 ._ZNKSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE3endEv [63] 0.06 0.00 6376067/12752134 ._ZNKSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE5beginEv [53] [85] 0.2 0.11 0.00 12752134 ._ZN9__gnu_cxx17__normal_iteratorIPKPNS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESt6vectorISB_SaISB_EEEC1ERKSD_ [85] ----------------------------------------------- 0.11 0.00 751928/751928 ._ZNK8SPoint3D11GetDistanceERKS_ [81] [86] 0.2 0.11 0.00 751928 ._ZNK8SPoint3D14GetDistanceSqrERKS_ [86] ----------------------------------------------- 0.00 0.11 1/1 ._ZN9Featurize4mainEiPPc [3] [87] 0.2 0.00 0.11 1 ._ZN9Featurize14ParseArgumentsEiPPc [87] 0.00 0.09 1/1 ._ZN17PdbidPointListMapC1EPKc [97] 0.00 0.01 1/1 ._ZN17PdbidPointListMap7GetKeysEPPPKcPi [197] 0.00 0.01 6549/6549 ._ZN7StrList10appendCopyEPKc [256] 0.00 0.00 1/1 ._ZN7StrList10extendCopyEPcPKc [292] 0.00 0.00 2/20 ._ZNKSt6vectorIPcSaIS0_EE4sizeEv [509] ----------------------------------------------- 0.00 0.10 869/869 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EED1Ev [77] [88] 0.2 0.00 0.10 869 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE5clearEv [88] 0.02 0.03 376890/2293831 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EEixEm [47] 0.01 0.02 189314/4939382 ._ZNKSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE4sizeEv [30] 0.02 0.00 99315/99315 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE14_M_delete_nodeEPNS_15_Hashtable_nodeIS8_EE [172] ----------------------------------------------- 0.00 0.00 1774/459891 ._ZN9Featurize23RunPointEnvironmentModeEv [4] 0.00 0.00 11809/459891 ._ZNSt6vectorIiSaIiEE15_M_range_insertIN9__gnu_cxx17__normal_iteratorIPiS1_EEEEvS6_T_S7_St20forward_iterator_tag [102] 0.07 0.03 446308/459891 ._ZNSt6vectorIiSaIiEE13_M_insert_auxEN9__gnu_cxx17__normal_iteratorIPiS1_EERKi [41] [89] 0.2 0.07 0.03 459891 ._ZNKSt6vectorIiSaIiEE4sizeEv [89] 0.02 0.00 459891/459891 ._ZNKSt6vectorIiSaIiEE5beginEv [186] 0.01 0.00 459891/459891 ._ZNKSt6vectorIiSaIiEE3endEv [206] 0.01 0.00 459891/459891 ._ZN9__gnu_cxxmiIPKiS2_St6vectorIiSaIiEEEENS_17__normal_iteratorIT_T1_E15difference_typeERKS9_RKNS6_IT0_S8_EE [257] ----------------------------------------------- 0.08 0.02 2293831/2293831 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EEixEm [47] [90] 0.2 0.08 0.02 2293831 ._ZNK9__gnu_cxx17__normal_iteratorIPPNS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESt6vectorISB_SaISB_EEEplERKl [90] 0.02 0.00 2293831/4590269 ._ZN9__gnu_cxx17__normal_iteratorIPPNS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESt6vectorISB_SaISB_EEEC1ERKSC_ [138] ----------------------------------------------- 0.00 0.00 35427/928043 ._ZNSt6vectorIiSaIiEE15_M_range_insertIN9__gnu_cxx17__normal_iteratorIPiS1_EEEEvS6_T_S7_St20forward_iterator_tag [102] 0.00 0.09 892616/928043 ._ZNSt6vectorIiSaIiEE13_M_insert_auxEN9__gnu_cxx17__normal_iteratorIPiS1_EERKi [41] [91] 0.2 0.00 0.10 928043 ._ZSt18uninitialized_copyIN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEES6_ET0_T_S8_S7_ [91] 0.01 0.09 928043/928043 ._ZSt24__uninitialized_copy_auxIN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEES6_ET0_T_S8_S7_11__true_type [92] ----------------------------------------------- 0.01 0.09 928043/928043 ._ZSt18uninitialized_copyIN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEES6_ET0_T_S8_S7_ [91] [92] 0.2 0.01 0.09 928043 ._ZSt24__uninitialized_copy_auxIN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEES6_ET0_T_S8_S7_11__true_type [92] 0.04 0.05 928043/954963 ._ZSt4copyIN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEES6_ET0_T_S8_S7_ [100] ----------------------------------------------- 0.00 0.10 38729/38729 ._ZN8Neighbor12GetNeighborsERK8SPoint3D [59] [93] 0.2 0.00 0.10 38729 ._ZN11SuperVectorIiE6extendERS0_ [93] 0.01 0.08 38729/38729 ._ZNSt6vectorIiSaIiEE6insertIN9__gnu_cxx17__normal_iteratorIPiS1_EEEEvS6_T_S7_ [96] 0.00 0.00 77458/996994 ._ZNSt6vectorIiSaIiEE3endEv [183] 0.00 0.00 38729/1236965 ._ZNSt6vectorIiSaIiEE5beginEv [180] ----------------------------------------------- 0.02 0.08 751928/751928 ._ZN5SAtom17GetHydrophobicityEv [49] [94] 0.1 0.02 0.08 751928 ._ZN5SAtom10IsBackboneEv [94] 0.08 0.00 751928/2201943 ._Z10IsStringInPKcS0_ [57] ----------------------------------------------- 0.00 0.00 10346/1399133 ._ZNKSt6vectorIP8SPoint3DSaIS1_EE4sizeEv [272] 0.08 0.01 1388787/1399133 ._ZN8NeighborC1EPK11SuperVectorIP8SPoint3DEf [11] [95] 0.1 0.09 0.01 1399133 ._ZNKSt6vectorIP8SPoint3DSaIS1_EE3endEv [95] 0.01 0.00 1399133/2798266 ._ZN9__gnu_cxx17__normal_iteratorIPKP8SPoint3DSt6vectorIS2_SaIS2_EEEC1ERKS4_ [161] ----------------------------------------------- 0.01 0.08 38729/38729 ._ZN11SuperVectorIiE6extendERS0_ [93] [96] 0.1 0.01 0.08 38729 ._ZNSt6vectorIiSaIiEE6insertIN9__gnu_cxx17__normal_iteratorIPiS1_EEEEvS6_T_S7_ [96] 0.00 0.08 38729/38729 ._ZNSt6vectorIiSaIiEE18_M_insert_dispatchIN9__gnu_cxx17__normal_iteratorIPiS1_EEEEvS6_T_S7_12__false_type [103] ----------------------------------------------- 0.00 0.09 1/1 ._ZN9Featurize14ParseArgumentsEiPPc [87] [97] 0.1 0.00 0.09 1 ._ZN17PdbidPointListMapC1EPKc [97] 0.00 0.09 1/1 ._ZN17PdbidPointListMap4readEPKc [98] 0.00 0.00 1/1 ._ZN9__gnu_cxx8hash_mapISsP9PointListNS_4hashISsEESt8equal_toISsESaIS2_EEC1Ev [293] ----------------------------------------------- 0.00 0.09 1/1 ._ZN17PdbidPointListMapC1EPKc [97] [98] 0.1 0.00 0.09 1 ._ZN17PdbidPointListMap4readEPKc [98] 0.00 0.04 14008/14877 ._ZN17PdbidPointListMap6lookupESsb [130] 0.00 0.04 14008/14008 ._ZN9PointList6appendEP5Point [133] 0.01 0.00 14008/14008 ._ZN5Point5parseEPcS0_ [232] 0.00 0.00 14008/14008 ._ZN5PointC1Ev [281] ----------------------------------------------- 0.08 0.01 1435816/1435816 ._ZNKSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EEixEm [54] [99] 0.1 0.08 0.01 1435816 ._ZNK9__gnu_cxx17__normal_iteratorIPKPNS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESt6vectorISB_SaISB_EEEplERKl [99] 0.01 0.00 1435816/12752134 ._ZN9__gnu_cxx17__normal_iteratorIPKPNS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESt6vectorISB_SaISB_EEEC1ERKSD_ [85] ----------------------------------------------- 0.00 0.00 26920/954963 ._ZNSt6vectorIiSaIiEE15_M_range_insertIN9__gnu_cxx17__normal_iteratorIPiS1_EEEEvS6_T_S7_St20forward_iterator_tag [102] 0.04 0.05 928043/954963 ._ZSt24__uninitialized_copy_auxIN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEES6_ET0_T_S8_S7_11__true_type [92] [100] 0.1 0.04 0.05 954963 ._ZSt4copyIN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEES6_ET0_T_S8_S7_ [100] 0.02 0.03 954963/954963 ._ZSt10__copy_ni1IN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEES6_ET0_T_S8_S7_11__true_type [125] ----------------------------------------------- 0.04 0.05 751928/751928 ._ZN9Featurize23RunPointEnvironmentModeEv [4] [101] 0.1 0.04 0.05 751928 ._ZNSt6vectorIiSaIiEEixEm [101] 0.02 0.00 751928/751928 ._ZNK9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEdeEv [169] 0.01 0.01 751928/751928 ._ZNK9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEplERKl [185] 0.01 0.01 751928/1236965 ._ZNSt6vectorIiSaIiEE5beginEv [180] ----------------------------------------------- 0.04 0.04 38729/38729 ._ZNSt6vectorIiSaIiEE18_M_insert_dispatchIN9__gnu_cxx17__normal_iteratorIPiS1_EEEEvS6_T_S7_12__false_type [103] [102] 0.1 0.04 0.04 38729 ._ZNSt6vectorIiSaIiEE15_M_range_insertIN9__gnu_cxx17__normal_iteratorIPiS1_EEEEvS6_T_S7_St20forward_iterator_tag [102] 0.01 0.00 53840/53840 ._ZSt18uninitialized_copyIN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEES2_ET0_T_S8_S7_ [193] 0.01 0.00 38729/38729 ._ZN9__gnu_cxxneIPiSt6vectorIiSaIiEEEEbRKNS_17__normal_iteratorIT_T0_EESA_ [194] 0.00 0.01 38729/38729 ._ZSt8distanceIN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEEENSt15iterator_traitsIT_E15difference_typeES8_S8_ [196] 0.00 0.00 35427/928043 ._ZSt18uninitialized_copyIN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEES6_ET0_T_S8_S7_ [91] 0.00 0.00 11809/459891 ._ZNKSt6vectorIiSaIiEE4sizeEv [89] 0.00 0.00 26920/954963 ._ZSt4copyIN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEES6_ET0_T_S8_S7_ [100] 0.00 0.00 11809/112898 ._ZSt8_DestroyIPiEvT_S1_ [187] 0.00 0.00 26920/996994 ._ZNSt6vectorIiSaIiEE3endEv [183] 0.00 0.00 62347/5342121 ._ZN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEC1ERKS1_ [136] 0.00 0.00 26920/65649 ._ZN9__gnu_cxxmiIPiS1_St6vectorIiSaIiEEEENS_17__normal_iteratorIT_T1_E15difference_typeERKS8_RKNS5_IT0_S7_EE [271] 0.00 0.00 35427/5001984 ._ZNK9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEE4baseEv [137] 0.00 0.00 11809/458117 ._ZNSt12_Vector_baseIiSaIiEE11_M_allocateEm [208] 0.00 0.00 26920/26920 ._ZSt7advanceIN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEEmEvRT_T0_ [347] 0.00 0.00 11809/11809 ._ZSt3maxImERKT_S2_S2_ [379] 0.00 0.00 11809/559206 ._ZNSt12_Vector_baseIiSaIiEE13_M_deallocateEPim [305] ----------------------------------------------- 0.00 0.08 38729/38729 ._ZNSt6vectorIiSaIiEE6insertIN9__gnu_cxx17__normal_iteratorIPiS1_EEEEvS6_T_S7_ [96] [103] 0.1 0.00 0.08 38729 ._ZNSt6vectorIiSaIiEE18_M_insert_dispatchIN9__gnu_cxx17__normal_iteratorIPiS1_EEEEvS6_T_S7_12__false_type [103] 0.04 0.04 38729/38729 ._ZNSt6vectorIiSaIiEE15_M_range_insertIN9__gnu_cxx17__normal_iteratorIPiS1_EEEEvS6_T_S7_St20forward_iterator_tag [102] ----------------------------------------------- 0.02 0.01 446308/1387918 ._ZNSt6vectorIiSaIiEE13_M_insert_auxEN9__gnu_cxx17__normal_iteratorIPiS1_EERKi [41] 0.04 0.01 941610/1387918 ._ZNSt6vectorIiSaIiEE9push_backERKi [35] [104] 0.1 0.07 0.02 1387918 ._ZSt10_ConstructIiiEvPT_RKT0_ [104] 0.02 0.00 1387918/2902258 ._ZnwmPv [145] ----------------------------------------------- 0.04 0.00 1562818/3219284 ._ZNK9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE4findERS4_ [25] 0.04 0.00 1656466/3219284 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE22insert_unique_noresizeERKS8_ [22] [105] 0.1 0.08 0.00 3219284 ._ZNK8Neighbor4Cell5EqualclERKS0_S3_ [105] ----------------------------------------------- 0.01 0.00 356156/3133536 ._ZN8CProtein13ParseDSSPLineEPKc [5] 0.07 0.00 2777380/3133536 ._ZN5SAtom12ParsePDBAtomEPKc [15] [106] 0.1 0.08 0.00 3133536 ._Z9ParseLongPlPKcii [106] ----------------------------------------------- 0.08 0.00 1388690/1388690 ._ZN5SAtom12ParsePDBAtomEPKc [15] [107] 0.1 0.08 0.00 1388690 ._ZN5SAtom22SetResidueFullSequenceEPS_ [107] ----------------------------------------------- 0.00 0.00 14008/4931234 ._ZN5PointD1Ev [277] 0.01 0.00 751928/4931234 ._ZN15SAtomPropertiesD1Ev [124] 0.05 0.01 4165298/4931234 ._ZN5SAtomD1Ev [48] [108] 0.1 0.06 0.02 4931234 ._ZN8SPoint3DD1Ev [108] 0.02 0.00 4931234/9103484 ._ZN7CObjectD2Ev [149] ----------------------------------------------- 0.07 0.00 751928/751928 ._ZN15SAtomProperties23CalculateAtomPropertiesEP5SAtom [21] [109] 0.1 0.07 0.00 751928 ._ZN15SAtomProperties16SetPartialChargeEP5SAtom [109] ----------------------------------------------- 0.07 0.00 2776608/2776608 ._ZN10CAtomArray7AddAtomEP5SAtomb [28] [110] 0.1 0.07 0.00 2776608 ._ZN5SAtomaSERS_ [110] ----------------------------------------------- 0.07 0.00 751928/751928 ._ZN15SAtomProperties23CalculateAtomPropertiesEP5SAtom [21] [111] 0.1 0.07 0.00 751928 ._ZN8SPoint3DaSERKS_ [111] ----------------------------------------------- 0.05 0.02 1388787/1388787 ._ZN8NeighborC1EPK11SuperVectorIP8SPoint3DEf [11] [112] 0.1 0.05 0.02 1388787 ._ZN9__gnu_cxxneIPKP8SPoint3DSt6vectorIS2_SaIS2_EEEEbRKNS_17__normal_iteratorIT_T0_EESD_ [112] 0.02 0.00 2777574/2798266 ._ZNK9__gnu_cxx17__normal_iteratorIPKP8SPoint3DSt6vectorIS2_SaIS2_EEE4baseEv [162] ----------------------------------------------- 0.00 0.00 751928/4917226 ._ZN15SAtomPropertiesC1Ev [179] 0.03 0.03 4165298/4917226 ._ZN5SAtomC1Ev [42] [113] 0.1 0.03 0.03 4917226 ._ZN8SPoint3DC1Ev [113] 0.03 0.00 4917226/9103484 ._ZN7CObjectC2Ev [114] ----------------------------------------------- 0.00 0.00 5214/9103484 ._ZN8CObArrayC1Ev [198] 0.00 0.00 14008/9103484 ._ZN8SPoint3DC1Eddd [282] 0.03 0.00 4167036/9103484 ._ZN14CProteinObjectC2Ev [74] 0.03 0.00 4917226/9103484 ._ZN8SPoint3DC1Ev [113] [114] 0.1 0.06 0.00 9103484 ._ZN7CObjectC2Ev [114] ----------------------------------------------- 0.00 0.00 869/7881471 ._ZN10CAtomArrayD2Ev [55] 0.00 0.00 869/7881471 ._ZN10CAtomArrayD1Ev [50] 0.00 0.00 869/7881471 ._ZN10CAtomArray18ExtractMarkedAtomsEi [33] 0.00 0.00 3476/7881471 ._ZN8CProteinD1Ev [36] 0.00 0.00 178078/7881471 ._ZN8CProtein13ParseDSSPLineEPKc [5] 0.01 0.00 1392166/7881471 ._ZN10CAtomArray8NumAtomsEv [147] 0.02 0.00 2776608/7881471 ._ZN10CAtomArray7AddAtomEP5SAtomb [28] 0.03 0.00 3528536/7881471 ._ZN10CAtomArray7GetAtomEi [66] [115] 0.1 0.06 0.00 7881471 ._ZN8CObArray7GetSizeEv [115] ----------------------------------------------- 0.06 0.00 751928/751928 ._ZN15SAtomProperties23CalculateAtomPropertiesEP5SAtom [21] [116] 0.1 0.06 0.00 751928 ._ZN15SAtomProperties18SetFunctionalGroupEP5SAtom [116] ----------------------------------------------- 0.02 0.00 869/1840 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE7reserveEm [128] 0.03 0.01 971/1840 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EED1Ev [146] [117] 0.1 0.05 0.01 1840 ._ZSt8_DestroyIPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEEvT_SD_ [117] 0.01 0.00 1840/1840 ._ZSt13__destroy_auxIPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEEvT_SD_11__true_type [234] ----------------------------------------------- 0.04 0.02 2293831/2293831 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EEixEm [47] [118] 0.1 0.04 0.02 2293831 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE5beginEv [118] 0.02 0.00 2293831/4590269 ._ZN9__gnu_cxx17__normal_iteratorIPPNS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESt6vectorISB_SaISB_EEEC1ERKSC_ [138] ----------------------------------------------- 0.00 0.06 869/869 ._ZN8NeighborC1EPK11SuperVectorIP8SPoint3DEf [11] [119] 0.1 0.00 0.06 869 ._ZN12SuperHashMapIN8Neighbor4CellEP11SuperVectorIiENS1_4HashENS1_5EqualEEC1Ev [119] 0.00 0.06 869/869 ._ZN9__gnu_cxx8hash_mapIN8Neighbor4CellEP11SuperVectorIiENS2_4HashENS2_5EqualESaIS5_EEC2Ev [120] ----------------------------------------------- 0.00 0.06 869/869 ._ZN12SuperHashMapIN8Neighbor4CellEP11SuperVectorIiENS1_4HashENS1_5EqualEEC1Ev [119] [120] 0.1 0.00 0.06 869 ._ZN9__gnu_cxx8hash_mapIN8Neighbor4CellEP11SuperVectorIiENS2_4HashENS2_5EqualESaIS5_EEC2Ev [120] 0.00 0.06 869/869 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EEC1EmRKS9_RKSC_RKSD_ [122] 0.00 0.00 869/869 ._ZNSaIP11SuperVectorIiEEC1Ev [474] 0.00 0.00 869/869 ._ZNSaIP11SuperVectorIiEED1Ev [475] ----------------------------------------------- 0.00 0.06 869/869 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EEC1EmRKS9_RKSC_RKSD_ [122] [121] 0.1 0.00 0.06 869 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE21_M_initialize_bucketsEm [121] 0.00 0.05 869/869 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE7reserveEm [128] 0.00 0.01 869/869 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE6insertENS0_17__normal_iteratorIPSB_SD_EEmRKSB_ [200] 0.00 0.00 869/1738 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE3endEv [288] 0.00 0.00 869/971 ._ZNK9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE12_M_next_sizeEm [444] ----------------------------------------------- 0.00 0.06 869/869 ._ZN9__gnu_cxx8hash_mapIN8Neighbor4CellEP11SuperVectorIiENS2_4HashENS2_5EqualESaIS5_EEC2Ev [120] [122] 0.1 0.00 0.06 869 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EEC1EmRKS9_RKSC_RKSD_ [122] 0.00 0.06 869/869 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE21_M_initialize_bucketsEm [121] 0.00 0.00 869/869 ._ZNSaIN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEEC1IS7_EERKSaIT_E [472] 0.00 0.00 869/869 ._ZNSaIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEEC1IS7_EERKSaIT_E [480] 0.00 0.00 869/869 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EEC1ERKSC_ [488] 0.00 0.00 869/971 ._ZNSaIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEED1Ev [446] ----------------------------------------------- 0.00 0.00 1774/101089 ._ZN9Featurize23RunPointEnvironmentModeEv [4] 0.00 0.05 99315/101089 ._ZN8NeighborD1Ev [45] [123] 0.1 0.01 0.05 101089 ._ZN11SuperVectorIiED1Ev [123] 0.02 0.03 101089/101089 ._ZNSt6vectorIiSaIiEED2Ev [129] ----------------------------------------------- 0.04 0.01 751928/751928 ._ZN9Featurize23RunPointEnvironmentModeEv [4] [124] 0.1 0.04 0.01 751928 ._ZN15SAtomPropertiesD1Ev [124] 0.01 0.00 751928/4931234 ._ZN8SPoint3DD1Ev [108] ----------------------------------------------- 0.02 0.03 954963/954963 ._ZSt4copyIN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEES6_ET0_T_S8_S7_ [100] [125] 0.1 0.02 0.03 954963 ._ZSt10__copy_ni1IN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEES6_ET0_T_S8_S7_11__true_type [125] 0.02 0.00 1909926/5001984 ._ZNK9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEE4baseEv [137] 0.00 0.01 954963/954963 ._ZSt10__copy_ni2IPiN9__gnu_cxx17__normal_iteratorIS0_St6vectorIiSaIiEEEEET0_T_S8_S7_11__true_type [188] ----------------------------------------------- 0.05 0.00 9880502/9880502 ._ZN9__gnu_cxxmiIPKPNS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESD_St6vectorISB_SaISB_EEEENS_17__normal_iteratorIT_T1_E15difference_typeERKSK_RKNSH_IT0_SJ_EE [58] [126] 0.1 0.05 0.00 9880502 ._ZNK9__gnu_cxx17__normal_iteratorIPKPNS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESt6vectorISB_SaISB_EEE4baseEv [126] ----------------------------------------------- [127] 0.1 0.05 0.00 ._ZN14CProteinObjectC1Em [127] ----------------------------------------------- 0.00 0.05 869/869 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE21_M_initialize_bucketsEm [121] [128] 0.1 0.00 0.05 869 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE7reserveEm [128] 0.02 0.00 869/1840 ._ZSt8_DestroyIPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEEvT_SD_ [117] 0.01 0.01 869/869 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE20_M_allocate_and_copyIPSB_EESF_mT_SG_ [177] 0.00 0.00 869/4939382 ._ZNKSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE4sizeEv [30] 0.00 0.00 869/869 ._ZNKSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE8capacityEv [286] 0.00 0.00 869/869 ._ZNKSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE8max_sizeEv [471] 0.00 0.00 869/1840 ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE13_M_deallocateEPSB_m [431] ----------------------------------------------- 0.02 0.03 101089/101089 ._ZN11SuperVectorIiED1Ev [123] [129] 0.1 0.02 0.03 101089 ._ZNSt6vectorIiSaIiEED2Ev [129] 0.02 0.00 101089/101089 ._ZNSt12_Vector_baseIiSaIiEED2Ev [171] 0.00 0.01 101089/112898 ._ZSt8_DestroyIPiEvT_S1_ [187] ----------------------------------------------- 0.00 0.00 869/14877 ._ZN17PdbidPointListMap12GetPointListEPKc [263] 0.00 0.04 14008/14877 ._ZN17PdbidPointListMap4readEPKc [98] [130] 0.1 0.00 0.05 14877 ._ZN17PdbidPointListMap6lookupESsb [130] 0.00 0.02 6549/6549 ._ZN9__gnu_cxx8hash_mapISsP9PointListNS_4hashISsEESt8equal_toISsESaIS2_EEixERKSs [152] 0.00 0.02 14877/14877 ._ZN9__gnu_cxx8hash_mapISsP9PointListNS_4hashISsEESt8equal_toISsESaIS2_EE4findERKSs [154] 0.00 0.00 14877/14879 ._ZN9__gnu_cxx19_Hashtable_iteratorISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EEC1Ev [361] 0.00 0.00 14877/27977 ._ZN9__gnu_cxx8hash_mapISsP9PointListNS_4hashISsEESt8equal_toISsESaIS2_EE3endEv [344] 0.00 0.00 14877/14877 ._ZNK9__gnu_cxx19_Hashtable_iteratorISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EEeqERKSD_ [362] 0.00 0.00 8328/21426 ._ZNK9__gnu_cxx19_Hashtable_iteratorISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EEdeEv [352] 0.00 0.00 6549/6549 ._ZN9PointListC1Ev [399] ----------------------------------------------- 0.02 0.02 1/1 ._ZN9FeaturizeD1Ev [132] [131] 0.1 0.02 0.02 1 ._ZN17PdbidPointListMapD1Ev [131] 0.00 0.01 1/1 ._ZN9__gnu_cxx8hash_mapISsP9PointListNS_4hashISsEESt8equal_toISsESaIS2_EED1Ev [189] 0.00 0.01 6549/13098 ._ZN9__gnu_cxx19_Hashtable_iteratorISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EEppEi [158] 0.00 0.00 6549/6549 ._ZN9PointListD1Ev [278] 0.00 0.00 1/2 ._ZN9__gnu_cxx8hash_mapISsP9PointListNS_4hashISsEESt8equal_toISsESaIS2_EE5beginEv [290] 0.00 0.00 6550/27977 ._ZN9__gnu_cxx8hash_mapISsP9PointListNS_4hashISsEESt8equal_toISsESaIS2_EE3endEv [344] 0.00 0.00 6550/13100 ._ZNK9__gnu_cxx19_Hashtable_iteratorISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EEneERKSD_ [371] 0.00 0.00 6549/21426 ._ZNK9__gnu_cxx19_Hashtable_iteratorISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EEdeEv [352] 0.00 0.00 1/14879 ._ZN9__gnu_cxx19_Hashtable_iteratorISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EEC1Ev [361] ----------------------------------------------- 0.00 0.04 1/1 .main [2] [132] 0.1 0.00 0.04 1 ._ZN9FeaturizeD1Ev [132] 0.02 0.02 1/1 ._ZN17PdbidPointListMapD1Ev [131] 0.00 0.00 2/2 ._ZN7StrList13destroyCopiesEv [547] 0.00 0.00 2/2 ._ZN7StrListD1Ev [549] ----------------------------------------------- 0.00 0.04 14008/14008 ._ZN17PdbidPointListMap4readEPKc [98] [133] 0.1 0.00 0.04 14008 ._ZN9PointList6appendEP5Point [133] 0.00 0.04 14008/14008 ._ZNSt6vectorIP5PointSaIS1_EE9push_backERKS1_ [134] ----------------------------------------------- 0.00 0.04 14008/14008 ._ZN9PointList6appendEP5Point [133] [134] 0.1 0.00 0.04 14008 ._ZNSt6vectorIP5PointSaIS1_EE9push_backERKS1_ [134] 0.01 0.03 12589/12589 ._ZNSt6vectorIP5PointSaIS1_EE13_M_insert_auxEN9__gnu_cxx17__normal_iteratorIPS1_S3_EERKS1_ [135] 0.00 0.00 1419/14008 ._ZSt10_ConstructIP5PointS1_EvPT_RKT0_ [279] 0.00 0.00 12589/45735 ._ZNSt6vectorIP5PointSaIS1_EE3endEv [337] ----------------------------------------------- 0.01 0.03 12589/12589 ._ZNSt6vectorIP5PointSaIS1_EE9push_backERKS1_ [134] [135] 0.1 0.01 0.03 12589 ._ZNSt6vectorIP5PointSaIS1_EE13_M_insert_auxEN9__gnu_cxx17__normal_iteratorIPS1_S3_EERKS1_ [135] 0.01 0.01 25178/25178 ._ZSt18uninitialized_copyIN9__gnu_cxx17__normal_iteratorIPP5PointSt6vectorIS3_SaIS3_EEEES8_ET0_T_SA_S9_ [173] 0.01 0.00 12589/12589 ._ZN9__gnu_cxx17__normal_iteratorIPP5PointSt6vectorIS2_SaIS2_EEEppEv [233] 0.00 0.00 12589/14008 ._ZSt10_ConstructIP5PointS1_EvPT_RKT0_ [279] 0.00 0.00 50356/167004 ._ZNK9__gnu_cxx17__normal_iteratorIPP5PointSt6vectorIS2_SaIS2_EEE4baseEv [312] 0.00 0.00 37767/145374 ._ZN9__gnu_cxx17__normal_iteratorIPP5PointSt6vectorIS2_SaIS2_EEEC1ERKS3_ [313] 0.00 0.00 12589/13458 ._ZNKSt6vectorIP5PointSaIS1_EE4sizeEv [367] 0.00 0.00 12589/12589 ._ZNSt12_Vector_baseIP5PointSaIS1_EE11_M_allocateEm [376] 0.00 0.00 12589/20912 ._ZNSt6vectorIP5PointSaIS1_EE5beginEv [353] 0.00 0.00 12589/45735 ._ZNSt6vectorIP5PointSaIS1_EE3endEv [337] 0.00 0.00 12589/12589 ._ZSt8_DestroyIN9__gnu_cxx17__normal_iteratorIPP5PointSt6vectorIS3_SaIS3_EEEEEvT_S9_ [378] 0.00 0.00 12589/19138 ._ZNSt12_Vector_baseIP5PointSaIS1_EE13_M_deallocateEPS1_m [358] ----------------------------------------------- 0.00 0.00 62347/5342121 ._ZNSt6vectorIiSaIiEE15_M_range_insertIN9__gnu_cxx17__normal_iteratorIPiS1_EEEEvS6_T_S7_St20forward_iterator_tag [102] 0.01 0.00 751928/5342121 ._ZNK9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEplERKl [185] 0.01 0.00 954963/5342121 ._ZSt10__copy_ni2IPiN9__gnu_cxx17__normal_iteratorIS0_St6vectorIiSaIiEEEEET0_T_S8_S7_11__true_type [188] 0.01 0.00 996994/5342121 ._ZNSt6vectorIiSaIiEE3endEv [183] 0.01 0.00 1236965/5342121 ._ZNSt6vectorIiSaIiEE5beginEv [180] 0.01 0.00 1338924/5342121 ._ZNSt6vectorIiSaIiEE13_M_insert_auxEN9__gnu_cxx17__normal_iteratorIPiS1_EERKi [41] [136] 0.1 0.04 0.00 5342121 ._ZN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEC1ERKS1_ [136] ----------------------------------------------- 0.00 0.00 35427/5001984 ._ZNSt6vectorIiSaIiEE15_M_range_insertIN9__gnu_cxx17__normal_iteratorIPiS1_EEEEvS6_T_S7_St20forward_iterator_tag [102] 0.00 0.00 77458/5001984 ._ZN9__gnu_cxxneIPiSt6vectorIiSaIiEEEEbRKNS_17__normal_iteratorIT_T0_EESA_ [194] 0.00 0.00 107680/5001984 ._ZSt10__copy_ni1IN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEES2_ET0_T_S8_S7_11__true_type [273] 0.00 0.00 131298/5001984 ._ZN9__gnu_cxxmiIPiS1_St6vectorIiSaIiEEEENS_17__normal_iteratorIT_T1_E15difference_typeERKS8_RKNS5_IT0_S7_EE [271] 0.01 0.00 954963/5001984 ._ZSt10__copy_ni2IPiN9__gnu_cxx17__normal_iteratorIS0_St6vectorIiSaIiEEEEET0_T_S8_S7_11__true_type [188] 0.01 0.00 1785232/5001984 ._ZNSt6vectorIiSaIiEE13_M_insert_auxEN9__gnu_cxx17__normal_iteratorIPiS1_EERKi [41] 0.02 0.00 1909926/5001984 ._ZSt10__copy_ni1IN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEES6_ET0_T_S8_S7_11__true_type [125] [137] 0.1 0.04 0.00 5001984 ._ZNK9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEE4baseEv [137] ----------------------------------------------- 0.00 0.00 869/4590269 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE14_M_fill_insertENS0_17__normal_iteratorIPSB_SD_EEmRKSB_ [199] 0.00 0.00 1738/4590269 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE3endEv [288] 0.02 0.00 2293831/4590269 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE5beginEv [118] 0.02 0.00 2293831/4590269 ._ZNK9__gnu_cxx17__normal_iteratorIPPNS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESt6vectorISB_SaISB_EEEplERKl [90] [138] 0.1 0.04 0.00 4590269 ._ZN9__gnu_cxx17__normal_iteratorIPPNS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESt6vectorISB_SaISB_EEEC1ERKSC_ [138] ----------------------------------------------- 0.02 0.02 1435816/1435816 ._ZNK12SuperHashMapIN8Neighbor4CellEP11SuperVectorIiENS1_4HashENS1_5EqualEE6hasKeyERKS1_ [23] [139] 0.1 0.02 0.02 1435816 ._ZNK9__gnu_cxx8hash_mapIN8Neighbor4CellEP11SuperVectorIiENS2_4HashENS2_5EqualESaIS5_EE3endEv [139] 0.02 0.00 1435816/1435816 ._ZNK9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE3endEv [168] ----------------------------------------------- 0.00 0.00 6549/643540 ._ZN9Featurize23RunPointEnvironmentModeEv [4] 0.00 0.00 7418/643540 ._Z15FindProteinFilePcPKcS1_PS1_ [68] 0.02 0.02 629573/643540 ._Z8FindFilePcPPKcS2_S2_S2_ [82] [140] 0.1 0.02 0.02 643540 ._Z12IsFileExistsPKc [140] 0.02 0.00 643540/643540 .stat [170] ----------------------------------------------- 0.04 0.00 446308/446308 ._ZNSt6vectorIiSaIiEE13_M_insert_auxEN9__gnu_cxx17__normal_iteratorIPiS1_EERKi [41] [141] 0.1 0.04 0.00 446308 ._ZN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEppEv [141] ----------------------------------------------- 0.04 0.00 10644/10644 ._ZN9Featurize23RunPointEnvironmentModeEv [4] [142] 0.1 0.04 0.00 10644 ._Z16PrintEnvironmentR16CPropertiesArrayP8_IO_FILE [142] 0.00 0.00 468336/468336 ._ZN16CPropertiesArray16GetPropertyValueEi [306] ----------------------------------------------- [143] 0.1 0.04 0.00 ._ZN8SPoint3DC2Ev [143] ----------------------------------------------- 0.03 0.01 1387918/1387918 ._ZN8NeighborC1EPK11SuperVectorIP8SPoint3DEf [11] [144] 0.1 0.03 0.01 1387918 ._ZN9__gnu_cxx17__normal_iteratorIPKP8SPoint3DSt6vectorIS2_SaIS2_EEEppEi [144] 0.01 0.00 1387918/2798266 ._ZN9__gnu_cxx17__normal_iteratorIPKP8SPoint3DSt6vectorIS2_SaIS2_EEEC1ERKS4_ [161] ----------------------------------------------- 0.00 0.00 6549/2902258 ._ZSt10_ConstructISt4pairIKSsP9PointListES4_EvPT_RKT0_ [285] 0.00 0.00 6550/2902258 ._ZSt10_ConstructIPcS0_EvPT_RKT0_ [255] 0.00 0.00 14008/2902258 ._ZSt10_ConstructIP5PointS1_EvPT_RKT0_ [279] 0.00 0.00 99315/2902258 ._ZSt10_ConstructISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES7_EvPT_RKT0_ [270] 0.02 0.00 1387918/2902258 ._ZSt10_ConstructIP8SPoint3DS1_EvPT_RKT0_ [76] 0.02 0.00 1387918/2902258 ._ZSt10_ConstructIiiEvPT_RKT0_ [104] [145] 0.1 0.04 0.00 2902258 ._ZnwmPv [145] ----------------------------------------------- 0.00 0.00 102/971 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE6resizeEm [43] 0.00 0.03 869/971 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EED1Ev [77] [146] 0.0 0.00 0.03 971 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EED1Ev [146] 0.03 0.01 971/1840 ._ZSt8_DestroyIPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEEvT_SD_ [117] 0.00 0.00 971/971 ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EED2Ev [451] ----------------------------------------------- 0.00 0.00 869/1392166 ._ZN13CNeighborhood17GeneratePointListEP10CAtomArray [52] 0.00 0.00 1738/1392166 ._ZN9Featurize23RunPointEnvironmentModeEv [4] 0.02 0.01 1389559/1392166 ._Z10MarkHetatmP10CAtomArray [37] [147] 0.0 0.02 0.01 1392166 ._ZN10CAtomArray8NumAtomsEv [147] 0.01 0.00 1392166/7881471 ._ZN8CObArray7GetSizeEv [115] ----------------------------------------------- 0.03 0.00 9163179/9163179 ._ZNK9SuperHashIiEclERKi [38] [148] 0.0 0.03 0.00 9163179 ._ZNK9__gnu_cxx4hashIiEclEi [148] ----------------------------------------------- 0.00 0.00 5214/9103484 ._ZN8CObArrayD1Ev [287] 0.01 0.00 4167036/9103484 ._ZN14CProteinObjectD2Ev [70] 0.02 0.00 4931234/9103484 ._ZN8SPoint3DD1Ev [108] [149] 0.0 0.03 0.00 9103484 ._ZN7CObjectD2Ev [149] ----------------------------------------------- 0.03 0.00 1656466/1656466 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE22insert_unique_noresizeERKS8_ [22] [150] 0.0 0.03 0.00 1656466 ._ZNKSt10_Select1stISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEclERS7_ [150] ----------------------------------------------- 0.00 0.00 1774/101089 ._ZN8Neighbor12GetNeighborsERK8SPoint3D [59] 0.01 0.02 99315/101089 ._ZN8NeighborC1EPK11SuperVectorIP8SPoint3DEf [11] [151] 0.0 0.01 0.02 101089 ._ZN11SuperVectorIiEC1Ev [151] 0.01 0.00 101089/101089 ._ZNSaIiEC1Ev [213] 0.01 0.00 101089/101089 ._ZNSt6vectorIiSaIiEEC2ERKS0_ [214] 0.00 0.00 101089/101089 ._ZNSaIiED1Ev [321] ----------------------------------------------- 0.00 0.02 6549/6549 ._ZN17PdbidPointListMap6lookupESsb [130] [152] 0.0 0.00 0.02 6549 ._ZN9__gnu_cxx8hash_mapISsP9PointListNS_4hashISsEESt8equal_toISsESaIS2_EEixERKSs [152] 0.00 0.02 6549/6549 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE14find_or_insertERKS5_ [153] 0.00 0.00 6549/6549 ._ZNSt4pairIKSsP9PointListEC1ERS0_RKS2_ [418] 0.00 0.00 6549/13098 ._ZNSt4pairIKSsP9PointListED1Ev [373] ----------------------------------------------- 0.00 0.02 6549/6549 ._ZN9__gnu_cxx8hash_mapISsP9PointListNS_4hashISsEESt8equal_toISsESaIS2_EEixERKSs [152] [153] 0.0 0.00 0.02 6549 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE14find_or_insertERKS5_ [153] 0.01 0.01 6549/6549 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE6resizeEm [182] 0.00 0.00 6549/13035 ._ZNK9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE10_M_bkt_numERKS5_ [252] 0.00 0.00 13098/137753 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EEixEm [211] 0.00 0.00 6549/6549 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE11_M_new_nodeERKS5_ [284] 0.00 0.00 9836/36574 ._ZNKSt10_Select1stISt4pairIKSsP9PointListEEclERS4_ [339] 0.00 0.00 9836/34995 ._ZNKSt10_Select1stISt4pairIKSsP9PointListEEclERKS4_ [342] 0.00 0.00 9836/36574 ._ZNKSt8equal_toISsEclERKSsS2_ [340] ----------------------------------------------- 0.00 0.02 14877/14877 ._ZN17PdbidPointListMap6lookupESsb [130] [154] 0.0 0.00 0.02 14877 ._ZN9__gnu_cxx8hash_mapISsP9PointListNS_4hashISsEESt8equal_toISsESaIS2_EE4findERKSs [154] 0.01 0.01 14877/14877 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE4findERS2_ [155] ----------------------------------------------- 0.01 0.01 14877/14877 ._ZN9__gnu_cxx8hash_mapISsP9PointListNS_4hashISsEESt8equal_toISsESaIS2_EE4findERKSs [154] [155] 0.0 0.01 0.01 14877 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE4findERS2_ [155] 0.01 0.01 14877/27912 ._ZNK9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE14_M_bkt_num_keyERS2_ [157] 0.00 0.00 14877/137753 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EEixEm [211] 0.00 0.00 26738/36574 ._ZNKSt10_Select1stISt4pairIKSsP9PointListEEclERS4_ [339] 0.00 0.00 26738/36574 ._ZNKSt8equal_toISsEclERKSsS2_ [340] 0.00 0.00 14877/42856 ._ZN9__gnu_cxx19_Hashtable_iteratorISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EEC1EPNS_15_Hashtable_nodeIS5_EEPNS_9hashtableIS5_SsS7_S9_SB_SC_EE [338] ----------------------------------------------- 0.01 0.01 99315/99315 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE22insert_unique_noresizeERKS8_ [22] [156] 0.0 0.01 0.01 99315 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE11_M_new_nodeERKS8_ [156] 0.01 0.00 99315/99315 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE11_M_get_nodeEv [215] 0.00 0.00 99315/99315 ._ZSt10_ConstructISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES7_EvPT_RKT0_ [270] ----------------------------------------------- 0.00 0.01 13035/27912 ._ZNK9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE10_M_bkt_numERKS5_ [252] 0.01 0.01 14877/27912 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE4findERS2_ [155] [157] 0.0 0.01 0.01 27912 ._ZNK9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE14_M_bkt_num_keyERS2_ [157] 0.00 0.01 27912/40036 ._ZNK9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE14_M_bkt_num_keyERS2_m [220] 0.00 0.00 27912/71332 ._ZNKSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE4sizeEv [216] ----------------------------------------------- 0.00 0.01 6549/13098 ._ZN17PdbidPointListMapD1Ev [131] 0.00 0.01 6549/13098 ._ZN17PdbidPointListMap7GetKeysEPPPKcPi [197] [158] 0.0 0.00 0.02 13098 ._ZN9__gnu_cxx19_Hashtable_iteratorISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EEppEi [158] 0.01 0.01 13098/13098 ._ZN9__gnu_cxx19_Hashtable_iteratorISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EEppEv [159] ----------------------------------------------- 0.01 0.01 13098/13098 ._ZN9__gnu_cxx19_Hashtable_iteratorISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EEppEi [158] [159] 0.0 0.01 0.01 13098 ._ZN9__gnu_cxx19_Hashtable_iteratorISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EEppEv [159] 0.00 0.00 6486/13035 ._ZNK9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE10_M_bkt_numERKS5_ [252] 0.00 0.00 24564/71332 ._ZNKSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE4sizeEv [216] 0.00 0.00 24562/137753 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EEixEm [211] ----------------------------------------------- 0.00 0.00 20470/4837861 ._ZNK9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE10_M_bkt_numERKS8_m [253] 0.01 0.00 1562818/4837861 ._ZNK9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE4findERS4_ [25] 0.01 0.00 1598107/4837861 ._ZNK9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE10_M_bkt_numERKS8_ [29] 0.01 0.00 1656466/4837861 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE22insert_unique_noresizeERKS8_ [22] [160] 0.0 0.02 0.00 4837861 ._ZNKSt10_Select1stISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEclERKS7_ [160] ----------------------------------------------- 0.00 0.00 11215/2798266 ._ZNKSt6vectorIP8SPoint3DSaIS1_EE5beginEv [283] 0.01 0.00 1387918/2798266 ._ZN9__gnu_cxx17__normal_iteratorIPKP8SPoint3DSt6vectorIS2_SaIS2_EEEppEi [144] 0.01 0.00 1399133/2798266 ._ZNKSt6vectorIP8SPoint3DSaIS1_EE3endEv [95] [161] 0.0 0.02 0.00 2798266 ._ZN9__gnu_cxx17__normal_iteratorIPKP8SPoint3DSt6vectorIS2_SaIS2_EEEC1ERKS4_ [161] ----------------------------------------------- 0.00 0.00 20692/2798266 ._ZN9__gnu_cxxmiIPKP8SPoint3DS4_St6vectorIS2_SaIS2_EEEENS_17__normal_iteratorIT_T1_E15difference_typeERKSB_RKNS8_IT0_SA_EE [280] 0.02 0.00 2777574/2798266 ._ZN9__gnu_cxxneIPKP8SPoint3DSt6vectorIS2_SaIS2_EEEEbRKNS_17__normal_iteratorIT_T0_EESD_ [112] [162] 0.0 0.02 0.00 2798266 ._ZNK9__gnu_cxx17__normal_iteratorIPKP8SPoint3DSt6vectorIS2_SaIS2_EEE4baseEv [162] ----------------------------------------------- 0.02 0.00 2293831/2293831 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EEixEm [47] [163] 0.0 0.02 0.00 2293831 ._ZNK9__gnu_cxx17__normal_iteratorIPPNS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESt6vectorISB_SaISB_EEEdeEv [163] ----------------------------------------------- 0.00 0.00 869/1627015 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE5beginEv [267] 0.00 0.00 100184/1627015 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE3endEv [269] 0.02 0.00 1525962/1627015 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE22insert_unique_noresizeERKS8_ [22] [164] 0.0 0.02 0.00 1627015 ._ZN9__gnu_cxx19_Hashtable_iteratorISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EEC1EPNS_15_Hashtable_nodeIS8_EEPNS_9hashtableIS8_S3_S9_SB_SC_SD_EE [164] ----------------------------------------------- 0.02 0.00 1525962/1525962 ._ZN12SuperHashMapIN8Neighbor4CellEP11SuperVectorIiENS1_4HashENS1_5EqualEEixERKS1_ [16] [165] 0.0 0.02 0.00 1525962 ._ZNSt4pairIKN8Neighbor4CellEP11SuperVectorIiEEC1IS1_S5_EERKS_IT_T0_E [165] ----------------------------------------------- 0.02 0.00 1525962/1525962 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE22insert_unique_noresizeERKS8_ [22] [166] 0.0 0.02 0.00 1525962 ._ZNSt4pairIN9__gnu_cxx19_Hashtable_iteratorIS_IKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EEEbEC1ERKSE_RKb [166] ----------------------------------------------- 0.02 0.00 1435816/1435816 ._ZNK12SuperHashMapIN8Neighbor4CellEP11SuperVectorIiENS1_4HashENS1_5EqualEE6hasKeyERKS1_ [23] [167] 0.0 0.02 0.00 1435816 ._ZNK9__gnu_cxx25_Hashtable_const_iteratorISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EEneERKSE_ [167] ----------------------------------------------- 0.02 0.00 1435816/1435816 ._ZNK9__gnu_cxx8hash_mapIN8Neighbor4CellEP11SuperVectorIiENS2_4HashENS2_5EqualESaIS5_EE3endEv [139] [168] 0.0 0.02 0.00 1435816 ._ZNK9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE3endEv [168] 0.00 0.00 1435816/2871632 ._ZN9__gnu_cxx25_Hashtable_const_iteratorISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EEC1EPKNS_15_Hashtable_nodeIS8_EEPKNS_9hashtableIS8_S3_S9_SB_SC_SD_EE [297] ----------------------------------------------- 0.02 0.00 751928/751928 ._ZNSt6vectorIiSaIiEEixEm [101] [169] 0.0 0.02 0.00 751928 ._ZNK9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEdeEv [169] ----------------------------------------------- 0.02 0.00 643540/643540 ._Z12IsFileExistsPKc [140] [170] 0.0 0.02 0.00 643540 .stat [170] ----------------------------------------------- 0.02 0.00 101089/101089 ._ZNSt6vectorIiSaIiEED2Ev [129] [171] 0.0 0.02 0.00 101089 ._ZNSt12_Vector_baseIiSaIiEED2Ev [171] 0.00 0.00 101089/559206 ._ZNSt12_Vector_baseIiSaIiEE13_M_deallocateEPim [305] 0.00 0.00 101089/101089 ._ZNSt12_Vector_baseIiSaIiEE12_Vector_implD1Ev [324] ----------------------------------------------- 0.02 0.00 99315/99315 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE5clearEv [88] [172] 0.0 0.02 0.00 99315 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE14_M_delete_nodeEPNS_15_Hashtable_nodeIS8_EE [172] 0.00 0.00 99315/99315 ._ZSt8_DestroyISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEvPT_ [330] 0.00 0.00 99315/99315 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE11_M_put_nodeEPNS_15_Hashtable_nodeIS8_EE [329] ----------------------------------------------- 0.01 0.01 25178/25178 ._ZNSt6vectorIP5PointSaIS1_EE13_M_insert_auxEN9__gnu_cxx17__normal_iteratorIPS1_S3_EERKS1_ [135] [173] 0.0 0.01 0.01 25178 ._ZSt18uninitialized_copyIN9__gnu_cxx17__normal_iteratorIPP5PointSt6vectorIS3_SaIS3_EEEES8_ET0_T_SA_S9_ [173] 0.00 0.01 25178/25178 ._ZSt24__uninitialized_copy_auxIN9__gnu_cxx17__normal_iteratorIPP5PointSt6vectorIS3_SaIS3_EEEES8_ET0_T_SA_S9_11__true_type [225] ----------------------------------------------- 0.00 0.01 869/1738 ._ZSt10__copy_ni1IPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESC_ET0_T_SE_SD_12__false_type [236] 0.00 0.01 869/1738 ._ZSt10__copy_ni1IN9__gnu_cxx17__normal_iteratorIPPNS0_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESt6vectorISC_SaISC_EEEESD_ET0_T_SJ_SI_11__true_type [235] [174] 0.0 0.00 0.02 1738 ._ZSt10__copy_ni2IPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESC_ET0_T_SE_SD_12__false_type [174] 0.00 0.02 1738/1738 ._ZSt11__copy_aux2IPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEEPT_SD_SD_SD_11__true_type [175] ----------------------------------------------- 0.00 0.02 1738/1738 ._ZSt10__copy_ni2IPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESC_ET0_T_SE_SD_12__false_type [174] [175] 0.0 0.00 0.02 1738 ._ZSt11__copy_aux2IPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEEPT_SD_SD_SD_11__true_type [175] 0.02 0.00 1738/1738 ._ZSt14__copy_trivialIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEEPT_PKSC_SF_SD_ [176] ----------------------------------------------- 0.02 0.00 1738/1738 ._ZSt11__copy_aux2IPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEEPT_SD_SD_SD_11__true_type [175] [176] 0.0 0.02 0.00 1738 ._ZSt14__copy_trivialIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEEPT_PKSC_SF_SD_ [176] ----------------------------------------------- 0.01 0.01 869/869 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE7reserveEm [128] [177] 0.0 0.01 0.01 869 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE20_M_allocate_and_copyIPSB_EESF_mT_SG_ [177] 0.00 0.01 869/869 ._ZSt18uninitialized_copyIPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESC_ET0_T_SE_SD_ [238] 0.00 0.00 869/971 ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE11_M_allocateEm [448] ----------------------------------------------- [178] 0.0 0.02 0.00 ._Z13setdebugleveli [178] ----------------------------------------------- 0.01 0.01 751928/751928 ._ZN9Featurize23RunPointEnvironmentModeEv [4] [179] 0.0 0.01 0.01 751928 ._ZN15SAtomPropertiesC1Ev [179] 0.00 0.00 751928/4917226 ._ZN8SPoint3DC1Ev [113] ----------------------------------------------- 0.00 0.00 38729/1236965 ._ZN11SuperVectorIiE6extendERS0_ [93] 0.00 0.00 446308/1236965 ._ZNSt6vectorIiSaIiEE13_M_insert_auxEN9__gnu_cxx17__normal_iteratorIPiS1_EERKi [41] 0.01 0.01 751928/1236965 ._ZNSt6vectorIiSaIiEEixEm [101] [180] 0.0 0.01 0.01 1236965 ._ZNSt6vectorIiSaIiEE5beginEv [180] 0.01 0.00 1236965/5342121 ._ZN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEC1ERKS1_ [136] ----------------------------------------------- 0.00 0.02 869/869 ._ZN9Featurize23RunPointEnvironmentModeEv [4] [181] 0.0 0.00 0.02 869 ._Z12FindDsspFilePcPKcS1_ [181] 0.00 0.02 869/7418 ._Z19PathFindProteinFilePcPKcS1_PS1_ [69] ----------------------------------------------- 0.01 0.01 6549/6549 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE14find_or_insertERKS5_ [153] [182] 0.0 0.01 0.01 6549 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE6resizeEm [182] 0.00 0.00 60620/137753 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EEixEm [211] 0.00 0.00 12124/12124 ._ZNK9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE10_M_bkt_numERKS5_m [262] 0.00 0.00 6549/71332 ._ZNKSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE4sizeEv [216] 0.00 0.00 6/7 ._ZNK9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE12_M_next_sizeEm [525] 0.00 0.00 6/6 ._ZNKSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE13get_allocatorEv [538] 0.00 0.00 6/6 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EEC1EmRKS8_RKS9_ [542] 0.00 0.00 6/7 ._ZNSaIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEEED1Ev [527] 0.00 0.00 6/6 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE4swapERSA_ [541] 0.00 0.00 6/7 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EED1Ev [533] ----------------------------------------------- 0.00 0.00 26920/996994 ._ZNSt6vectorIiSaIiEE15_M_range_insertIN9__gnu_cxx17__normal_iteratorIPiS1_EEEEvS6_T_S7_St20forward_iterator_tag [102] 0.00 0.00 77458/996994 ._ZN11SuperVectorIiE6extendERS0_ [93] 0.00 0.00 446308/996994 ._ZNSt6vectorIiSaIiEE9push_backERKi [35] 0.00 0.00 446308/996994 ._ZNSt6vectorIiSaIiEE13_M_insert_auxEN9__gnu_cxx17__normal_iteratorIPiS1_EERKi [41] [183] 0.0 0.01 0.01 996994 ._ZNSt6vectorIiSaIiEE3endEv [183] 0.01 0.00 996994/5342121 ._ZN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEC1ERKS1_ [136] ----------------------------------------------- 0.00 0.02 10346/10346 ._ZNSt6vectorIP8SPoint3DSaIS1_EE9push_backERKS1_ [64] [184] 0.0 0.00 0.02 10346 ._ZNSt6vectorIP8SPoint3DSaIS1_EE13_M_insert_auxEN9__gnu_cxx17__normal_iteratorIPS1_S3_EERKS1_ [184] 0.00 0.01 20692/20692 ._ZSt18uninitialized_copyIN9__gnu_cxx17__normal_iteratorIPP8SPoint3DSt6vectorIS3_SaIS3_EEEES8_ET0_T_SA_S9_ [229] 0.01 0.00 10346/20692 ._ZNSt6vectorIP8SPoint3DSaIS1_EE3endEv [227] 0.00 0.00 10346/1387918 ._ZSt10_ConstructIP8SPoint3DS1_EvPT_RKT0_ [76] 0.00 0.00 10346/10346 ._ZNKSt6vectorIP8SPoint3DSaIS1_EE4sizeEv [272] 0.00 0.00 41384/103460 ._ZNK9__gnu_cxx17__normal_iteratorIPP8SPoint3DSt6vectorIS2_SaIS2_EEE4baseEv [317] 0.00 0.00 31038/82768 ._ZN9__gnu_cxx17__normal_iteratorIPP8SPoint3DSt6vectorIS2_SaIS2_EEEC1ERKS3_ [331] 0.00 0.00 10346/10346 ._ZNSt12_Vector_baseIP8SPoint3DSaIS1_EE11_M_allocateEm [386] 0.00 0.00 10346/10346 ._ZN9__gnu_cxx17__normal_iteratorIPP8SPoint3DSt6vectorIS2_SaIS2_EEEppEv [385] 0.00 0.00 10346/10346 ._ZNSt6vectorIP8SPoint3DSaIS1_EE5beginEv [387] 0.00 0.00 10346/10346 ._ZSt8_DestroyIN9__gnu_cxx17__normal_iteratorIPP8SPoint3DSt6vectorIS3_SaIS3_EEEEEvT_S9_ [389] 0.00 0.00 10346/11215 ._ZNSt12_Vector_baseIP8SPoint3DSaIS1_EE13_M_deallocateEPS1_m [380] ----------------------------------------------- 0.01 0.01 751928/751928 ._ZNSt6vectorIiSaIiEEixEm [101] [185] 0.0 0.01 0.01 751928 ._ZNK9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEplERKl [185] 0.01 0.00 751928/5342121 ._ZN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEC1ERKS1_ [136] ----------------------------------------------- 0.02 0.00 459891/459891 ._ZNKSt6vectorIiSaIiEE4sizeEv [89] [186] 0.0 0.02 0.00 459891 ._ZNKSt6vectorIiSaIiEE5beginEv [186] 0.00 0.00 459891/919782 ._ZN9__gnu_cxx17__normal_iteratorIPKiSt6vectorIiSaIiEEEC1ERKS2_ [301] ----------------------------------------------- 0.00 0.00 11809/112898 ._ZNSt6vectorIiSaIiEE15_M_range_insertIN9__gnu_cxx17__normal_iteratorIPiS1_EEEEvS6_T_S7_St20forward_iterator_tag [102] 0.00 0.01 101089/112898 ._ZNSt6vectorIiSaIiEED2Ev [129] [187] 0.0 0.01 0.01 112898 ._ZSt8_DestroyIPiEvT_S1_ [187] 0.01 0.00 112898/112898 ._ZSt13__destroy_auxIPiEvT_S1_11__true_type [212] ----------------------------------------------- 0.00 0.01 954963/954963 ._ZSt10__copy_ni1IN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEES6_ET0_T_S8_S7_11__true_type [125] [188] 0.0 0.00 0.01 954963 ._ZSt10__copy_ni2IPiN9__gnu_cxx17__normal_iteratorIS0_St6vectorIiSaIiEEEEET0_T_S8_S7_11__true_type [188] 0.01 0.00 954963/5001984 ._ZNK9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEE4baseEv [137] 0.01 0.00 954963/5342121 ._ZN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEC1ERKS1_ [136] 0.00 0.00 954963/1008803 ._ZSt11__copy_aux2IiEPT_S1_S1_S1_11__true_type [299] ----------------------------------------------- 0.00 0.01 1/1 ._ZN17PdbidPointListMapD1Ev [131] [189] 0.0 0.00 0.01 1 ._ZN9__gnu_cxx8hash_mapISsP9PointListNS_4hashISsEESt8equal_toISsESaIS2_EED1Ev [189] 0.00 0.01 1/1 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EED1Ev [191] ----------------------------------------------- 0.01 0.00 1/1 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EED1Ev [191] [190] 0.0 0.01 0.00 1 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE5clearEv [190] 0.00 0.00 24578/137753 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EEixEm [211] 0.00 0.00 12290/71332 ._ZNKSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE4sizeEv [216] 0.00 0.00 6549/6549 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE14_M_delete_nodeEPNS_15_Hashtable_nodeIS5_EE [407] ----------------------------------------------- 0.00 0.01 1/1 ._ZN9__gnu_cxx8hash_mapISsP9PointListNS_4hashISsEESt8equal_toISsESaIS2_EED1Ev [189] [191] 0.0 0.00 0.01 1 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EED1Ev [191] 0.01 0.00 1/1 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE5clearEv [190] 0.00 0.00 1/7 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EED1Ev [533] 0.00 0.00 1/1 ._ZNSaIN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEEED1Ev [590] ----------------------------------------------- 0.01 0.00 787/787 ._ZN8CProtein12ParsePDBLineEPKc [12] [192] 0.0 0.01 0.00 787 ._ZN8CProtein12ParseHetAtomEPKc [192] 0.00 0.00 787/1444154 ._ZN5SAtom12ParsePDBAtomEPKc [15] 0.00 0.00 772/2776608 ._ZN10CAtomArray7AddAtomEP5SAtomb [28] 0.00 0.00 772/4165298 ._ZN8CObArray3AddEP7CObject [32] ----------------------------------------------- 0.01 0.00 53840/53840 ._ZNSt6vectorIiSaIiEE15_M_range_insertIN9__gnu_cxx17__normal_iteratorIPiS1_EEEEvS6_T_S7_St20forward_iterator_tag [102] [193] 0.0 0.01 0.00 53840 ._ZSt18uninitialized_copyIN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEES2_ET0_T_S8_S7_ [193] 0.00 0.00 53840/53840 ._ZSt24__uninitialized_copy_auxIN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEES2_ET0_T_S8_S7_11__true_type [274] ----------------------------------------------- 0.01 0.00 38729/38729 ._ZNSt6vectorIiSaIiEE15_M_range_insertIN9__gnu_cxx17__normal_iteratorIPiS1_EEEEvS6_T_S7_St20forward_iterator_tag [102] [194] 0.0 0.01 0.00 38729 ._ZN9__gnu_cxxneIPiSt6vectorIiSaIiEEEEbRKNS_17__normal_iteratorIT_T0_EESA_ [194] 0.00 0.00 77458/5001984 ._ZNK9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEE4baseEv [137] ----------------------------------------------- 0.01 0.00 38729/38729 ._ZSt8distanceIN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEEENSt15iterator_traitsIT_E15difference_typeES8_S8_ [196] [195] 0.0 0.01 0.00 38729 ._ZSt10__distanceIN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEEENSt15iterator_traitsIT_E15difference_typeES8_S8_St26random_access_iterator_tag [195] 0.00 0.00 38729/65649 ._ZN9__gnu_cxxmiIPiS1_St6vectorIiSaIiEEEENS_17__normal_iteratorIT_T1_E15difference_typeERKS8_RKNS5_IT0_S7_EE [271] ----------------------------------------------- 0.00 0.01 38729/38729 ._ZNSt6vectorIiSaIiEE15_M_range_insertIN9__gnu_cxx17__normal_iteratorIPiS1_EEEEvS6_T_S7_St20forward_iterator_tag [102] [196] 0.0 0.00 0.01 38729 ._ZSt8distanceIN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEEENSt15iterator_traitsIT_E15difference_typeES8_S8_ [196] 0.01 0.00 38729/38729 ._ZSt10__distanceIN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEEENSt15iterator_traitsIT_E15difference_typeES8_S8_St26random_access_iterator_tag [195] 0.00 0.00 38729/65649 ._ZSt19__iterator_categoryIN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEEENSt15iterator_traitsIT_E17iterator_categoryERKS8_ [335] ----------------------------------------------- 0.00 0.01 1/1 ._ZN9Featurize14ParseArgumentsEiPPc [87] [197] 0.0 0.00 0.01 1 ._ZN17PdbidPointListMap7GetKeysEPPPKcPi [197] 0.00 0.01 6549/13098 ._ZN9__gnu_cxx19_Hashtable_iteratorISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EEppEi [158] 0.00 0.00 1/2 ._ZN9__gnu_cxx8hash_mapISsP9PointListNS_4hashISsEESt8equal_toISsESaIS2_EE5beginEv [290] 0.00 0.00 6550/27977 ._ZN9__gnu_cxx8hash_mapISsP9PointListNS_4hashISsEESt8equal_toISsESaIS2_EE3endEv [344] 0.00 0.00 6550/13100 ._ZNK9__gnu_cxx19_Hashtable_iteratorISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EEneERKSD_ [371] 0.00 0.00 6549/21426 ._ZNK9__gnu_cxx19_Hashtable_iteratorISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EEdeEv [352] 0.00 0.00 1/1 ._ZNK9__gnu_cxx8hash_mapISsP9PointListNS_4hashISsEESt8equal_toISsESaIS2_EE4sizeEv [585] 0.00 0.00 1/14879 ._ZN9__gnu_cxx19_Hashtable_iteratorISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EEC1Ev [361] ----------------------------------------------- 0.00 0.00 869/5214 ._ZN10CAtomArrayC1Ev [264] 0.00 0.00 869/5214 ._ZN10CAtomArrayC2Ev [265] 0.01 0.00 3476/5214 ._ZN8CProteinC1EPKc [7] [198] 0.0 0.01 0.00 5214 ._ZN8CObArrayC1Ev [198] 0.00 0.00 5214/9103484 ._ZN7CObjectC2Ev [114] ----------------------------------------------- 0.00 0.01 869/869 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE6insertENS0_17__normal_iteratorIPSB_SD_EEmRKSB_ [200] [199] 0.0 0.00 0.01 869 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE14_M_fill_insertENS0_17__normal_iteratorIPSB_SD_EEmRKSB_ [199] 0.00 0.01 869/869 ._ZSt18uninitialized_copyIN9__gnu_cxx17__normal_iteratorIPPNS0_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESt6vectorISC_SaISC_EEEESD_ET0_T_SJ_SI_ [237] 0.00 0.00 869/1738 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE3endEv [288] 0.00 0.00 869/4590269 ._ZN9__gnu_cxx17__normal_iteratorIPPNS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESt6vectorISB_SaISB_EEEC1ERKSC_ [138] 0.00 0.00 869/869 ._ZN9__gnu_cxxmiIPPNS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESC_St6vectorISB_SaISB_EEEENS_17__normal_iteratorIT_T1_E15difference_typeERKSJ_RKNSG_IT0_SI_EE [469] 0.00 0.00 869/971 ._ZSt20uninitialized_fill_nIPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEmSB_ET_SD_T0_RKT1_ [452] 0.00 0.00 869/869 ._ZSt4fillIN9__gnu_cxx17__normal_iteratorIPPNS0_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESt6vectorISC_SaISC_EEEESC_EvT_SI_RKT0_ [490] ----------------------------------------------- 0.00 0.01 869/869 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE21_M_initialize_bucketsEm [121] [200] 0.0 0.00 0.01 869 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE6insertENS0_17__normal_iteratorIPSB_SD_EEmRKSB_ [200] 0.00 0.01 869/869 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE14_M_fill_insertENS0_17__normal_iteratorIPSB_SD_EEmRKSB_ [199] ----------------------------------------------- 0.00 0.00 99315/1625277 ._ZN8NeighborD1Ev [45] 0.01 0.00 1525962/1625277 ._ZN12SuperHashMapIN8Neighbor4CellEP11SuperVectorIiENS1_4HashENS1_5EqualEEixERKS1_ [16] [201] 0.0 0.01 0.00 1625277 ._ZNK9__gnu_cxx19_Hashtable_iteratorISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EEdeEv [201] ----------------------------------------------- 0.01 0.00 1525962/1525962 ._ZN12SuperHashMapIN8Neighbor4CellEP11SuperVectorIiENS1_4HashENS1_5EqualEEixERKS1_ [16] [202] 0.0 0.01 0.00 1525962 ._ZNSt4pairIN8Neighbor4CellEP11SuperVectorIiEEC1ERKS1_RKS4_ [202] ----------------------------------------------- 0.01 0.00 1435816/1435816 ._ZNKSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EEixEm [54] [203] 0.0 0.01 0.00 1435816 ._ZNK9__gnu_cxx17__normal_iteratorIPKPNS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESt6vectorISB_SaISB_EEEdeEv [203] ----------------------------------------------- 0.01 0.00 1387918/1387918 ._ZN8NeighborC1EPK11SuperVectorIP8SPoint3DEf [11] [204] 0.0 0.01 0.00 1387918 ._ZNK9__gnu_cxx17__normal_iteratorIPKP8SPoint3DSt6vectorIS2_SaIS2_EEEdeEv [204] ----------------------------------------------- 0.01 0.00 813271/813271 ._ZN16CPropertiesArray19UpdatePropertyArrayEP15SAtomProperties [210] [205] 0.0 0.01 0.00 813271 ._ZN16CPropertiesArray7AddPropEii [205] ----------------------------------------------- 0.01 0.00 459891/459891 ._ZNKSt6vectorIiSaIiEE4sizeEv [89] [206] 0.0 0.01 0.00 459891 ._ZNKSt6vectorIiSaIiEE3endEv [206] 0.00 0.00 459891/919782 ._ZN9__gnu_cxx17__normal_iteratorIPKiSt6vectorIiSaIiEEEC1ERKS2_ [301] ----------------------------------------------- 0.01 0.00 458117/458117 ._ZNSt12_Vector_baseIiSaIiEE11_M_allocateEm [208] [207] 0.0 0.01 0.00 458117 ._ZN9__gnu_cxx13new_allocatorIiE8allocateEmPKv [207] ----------------------------------------------- 0.00 0.00 11809/458117 ._ZNSt6vectorIiSaIiEE15_M_range_insertIN9__gnu_cxx17__normal_iteratorIPiS1_EEEEvS6_T_S7_St20forward_iterator_tag [102] 0.00 0.01 446308/458117 ._ZNSt6vectorIiSaIiEE13_M_insert_auxEN9__gnu_cxx17__normal_iteratorIPiS1_EERKi [41] [208] 0.0 0.00 0.01 458117 ._ZNSt12_Vector_baseIiSaIiEE11_M_allocateEm [208] 0.01 0.00 458117/458117 ._ZN9__gnu_cxx13new_allocatorIiE8allocateEmPKv [207] ----------------------------------------------- 0.01 0.00 446308/446308 ._ZNSt6vectorIiSaIiEE13_M_insert_auxEN9__gnu_cxx17__normal_iteratorIPiS1_EERKi [41] [209] 0.0 0.01 0.00 446308 ._ZSt8_DestroyIN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEEEvT_S7_ [209] 0.00 0.00 446308/446308 ._ZSt13__destroy_auxIN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEEEvT_S7_11__true_type [309] ----------------------------------------------- 0.00 0.01 146634/146634 ._ZN9Featurize23RunPointEnvironmentModeEv [4] [210] 0.0 0.00 0.01 146634 ._ZN16CPropertiesArray19UpdatePropertyArrayEP15SAtomProperties [210] 0.01 0.00 813271/813271 ._ZN16CPropertiesArray7AddPropEii [205] ----------------------------------------------- 0.00 0.00 18/137753 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE5beginEv [291] 0.00 0.00 13098/137753 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE14find_or_insertERKS5_ [153] 0.00 0.00 14877/137753 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE4findERS2_ [155] 0.00 0.00 24562/137753 ._ZN9__gnu_cxx19_Hashtable_iteratorISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EEppEv [159] 0.00 0.00 24578/137753 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE5clearEv [190] 0.00 0.00 60620/137753 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE6resizeEm [182] [211] 0.0 0.00 0.01 137753 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EEixEm [211] 0.01 0.00 137753/137753 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE5beginEv [259] 0.01 0.00 137753/137753 ._ZNK9__gnu_cxx17__normal_iteratorIPPNS_15_Hashtable_nodeISt4pairIKSsP9PointListEEESt6vectorIS8_SaIS8_EEEplERKl [258] 0.00 0.00 137753/137753 ._ZNK9__gnu_cxx17__normal_iteratorIPPNS_15_Hashtable_nodeISt4pairIKSsP9PointListEEESt6vectorIS8_SaIS8_EEEdeEv [316] ----------------------------------------------- 0.01 0.00 112898/112898 ._ZSt8_DestroyIPiEvT_S1_ [187] [212] 0.0 0.01 0.00 112898 ._ZSt13__destroy_auxIPiEvT_S1_11__true_type [212] ----------------------------------------------- 0.01 0.00 101089/101089 ._ZN11SuperVectorIiEC1Ev [151] [213] 0.0 0.01 0.00 101089 ._ZNSaIiEC1Ev [213] 0.00 0.00 101089/101089 ._ZN9__gnu_cxx13new_allocatorIiEC2Ev [319] ----------------------------------------------- 0.01 0.00 101089/101089 ._ZN11SuperVectorIiEC1Ev [151] [214] 0.0 0.01 0.00 101089 ._ZNSt6vectorIiSaIiEEC2ERKS0_ [214] 0.00 0.00 101089/101089 ._ZNSt12_Vector_baseIiSaIiEEC2ERKS0_ [325] ----------------------------------------------- 0.01 0.00 99315/99315 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE11_M_new_nodeERKS8_ [156] [215] 0.0 0.01 0.00 99315 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE11_M_get_nodeEv [215] 0.00 0.00 99315/99315 ._ZN9__gnu_cxx13new_allocatorINS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEE8allocateEmPKv [328] ----------------------------------------------- 0.00 0.00 1/71332 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE7reserveEm [296] 0.00 0.00 16/71332 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE5beginEv [291] 0.00 0.00 6549/71332 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE6resizeEm [182] 0.00 0.00 12290/71332 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE5clearEv [190] 0.00 0.00 24564/71332 ._ZN9__gnu_cxx19_Hashtable_iteratorISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EEppEv [159] 0.00 0.00 27912/71332 ._ZNK9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE14_M_bkt_num_keyERS2_ [157] [216] 0.0 0.01 0.00 71332 ._ZNKSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE4sizeEv [216] 0.00 0.00 71332/71332 ._ZNKSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE3endEv [334] 0.00 0.00 71332/71333 ._ZNKSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE5beginEv [333] 0.00 0.00 71332/71333 ._ZN9__gnu_cxxmiIPKPNS_15_Hashtable_nodeISt4pairIKSsP9PointListEEESA_St6vectorIS8_SaIS8_EEEENS_17__normal_iteratorIT_T1_E15difference_typeERKSH_RKNSE_IT0_SG_EE [332] ----------------------------------------------- 0.01 0.00 40036/40036 ._ZNK9__gnu_cxx4hashIPKcEclES2_ [218] [217] 0.0 0.01 0.00 40036 ._ZN9__gnu_cxx17__stl_hash_stringEPKc [217] ----------------------------------------------- 0.00 0.01 40036/40036 ._ZNK9__gnu_cxx4hashISsEclERKSs [219] [218] 0.0 0.00 0.01 40036 ._ZNK9__gnu_cxx4hashIPKcEclES2_ [218] 0.01 0.00 40036/40036 ._ZN9__gnu_cxx17__stl_hash_stringEPKc [217] ----------------------------------------------- 0.00 0.01 40036/40036 ._ZNK9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE14_M_bkt_num_keyERS2_m [220] [219] 0.0 0.00 0.01 40036 ._ZNK9__gnu_cxx4hashISsEclERKSs [219] 0.00 0.01 40036/40036 ._ZNK9__gnu_cxx4hashIPKcEclES2_ [218] ----------------------------------------------- 0.00 0.00 12124/40036 ._ZNK9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE10_M_bkt_numERKS5_m [262] 0.00 0.01 27912/40036 ._ZNK9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE14_M_bkt_num_keyERS2_ [157] [220] 0.0 0.00 0.01 40036 ._ZNK9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE14_M_bkt_num_keyERS2_m [220] 0.00 0.01 40036/40036 ._ZNK9__gnu_cxx4hashISsEclERKSs [219] ----------------------------------------------- 0.00 0.01 25178/25178 ._ZSt4copyIN9__gnu_cxx17__normal_iteratorIPP5PointSt6vectorIS3_SaIS3_EEEES8_ET0_T_SA_S9_ [226] [221] 0.0 0.00 0.01 25178 ._ZSt10__copy_ni1IN9__gnu_cxx17__normal_iteratorIPP5PointSt6vectorIS3_SaIS3_EEEES8_ET0_T_SA_S9_11__true_type [221] 0.00 0.01 25178/25178 ._ZSt10__copy_ni2IPP5PointN9__gnu_cxx17__normal_iteratorIS2_St6vectorIS1_SaIS1_EEEEET0_T_SA_S9_11__true_type [222] 0.00 0.00 50356/167004 ._ZNK9__gnu_cxx17__normal_iteratorIPP5PointSt6vectorIS2_SaIS2_EEE4baseEv [312] ----------------------------------------------- 0.00 0.01 25178/25178 ._ZSt10__copy_ni1IN9__gnu_cxx17__normal_iteratorIPP5PointSt6vectorIS3_SaIS3_EEEES8_ET0_T_SA_S9_11__true_type [221] [222] 0.0 0.00 0.01 25178 ._ZSt10__copy_ni2IPP5PointN9__gnu_cxx17__normal_iteratorIS2_St6vectorIS1_SaIS1_EEEEET0_T_SA_S9_11__true_type [222] 0.00 0.01 25178/25178 ._ZSt11__copy_aux2IP5PointEPT_S3_S3_S3_11__true_type [223] 0.00 0.00 25178/167004 ._ZNK9__gnu_cxx17__normal_iteratorIPP5PointSt6vectorIS2_SaIS2_EEE4baseEv [312] 0.00 0.00 25178/145374 ._ZN9__gnu_cxx17__normal_iteratorIPP5PointSt6vectorIS2_SaIS2_EEEC1ERKS3_ [313] ----------------------------------------------- 0.00 0.01 25178/25178 ._ZSt10__copy_ni2IPP5PointN9__gnu_cxx17__normal_iteratorIS2_St6vectorIS1_SaIS1_EEEEET0_T_SA_S9_11__true_type [222] [223] 0.0 0.00 0.01 25178 ._ZSt11__copy_aux2IP5PointEPT_S3_S3_S3_11__true_type [223] 0.01 0.00 25178/25178 ._ZSt14__copy_trivialIP5PointEPT_PKS2_S5_S3_ [224] ----------------------------------------------- 0.01 0.00 25178/25178 ._ZSt11__copy_aux2IP5PointEPT_S3_S3_S3_11__true_type [223] [224] 0.0 0.01 0.00 25178 ._ZSt14__copy_trivialIP5PointEPT_PKS2_S5_S3_ [224] ----------------------------------------------- 0.00 0.01 25178/25178 ._ZSt18uninitialized_copyIN9__gnu_cxx17__normal_iteratorIPP5PointSt6vectorIS3_SaIS3_EEEES8_ET0_T_SA_S9_ [173] [225] 0.0 0.00 0.01 25178 ._ZSt24__uninitialized_copy_auxIN9__gnu_cxx17__normal_iteratorIPP5PointSt6vectorIS3_SaIS3_EEEES8_ET0_T_SA_S9_11__true_type [225] 0.00 0.01 25178/25178 ._ZSt4copyIN9__gnu_cxx17__normal_iteratorIPP5PointSt6vectorIS3_SaIS3_EEEES8_ET0_T_SA_S9_ [226] ----------------------------------------------- 0.00 0.01 25178/25178 ._ZSt24__uninitialized_copy_auxIN9__gnu_cxx17__normal_iteratorIPP5PointSt6vectorIS3_SaIS3_EEEES8_ET0_T_SA_S9_11__true_type [225] [226] 0.0 0.00 0.01 25178 ._ZSt4copyIN9__gnu_cxx17__normal_iteratorIPP5PointSt6vectorIS3_SaIS3_EEEES8_ET0_T_SA_S9_ [226] 0.00 0.01 25178/25178 ._ZSt10__copy_ni1IN9__gnu_cxx17__normal_iteratorIPP5PointSt6vectorIS3_SaIS3_EEEES8_ET0_T_SA_S9_11__true_type [221] ----------------------------------------------- 0.01 0.00 10346/20692 ._ZNSt6vectorIP8SPoint3DSaIS1_EE9push_backERKS1_ [64] 0.01 0.00 10346/20692 ._ZNSt6vectorIP8SPoint3DSaIS1_EE13_M_insert_auxEN9__gnu_cxx17__normal_iteratorIPS1_S3_EERKS1_ [184] [227] 0.0 0.01 0.00 20692 ._ZNSt6vectorIP8SPoint3DSaIS1_EE3endEv [227] 0.00 0.00 20692/82768 ._ZN9__gnu_cxx17__normal_iteratorIPP8SPoint3DSt6vectorIS2_SaIS2_EEEC1ERKS3_ [331] ----------------------------------------------- 0.01 0.00 20692/20692 ._ZSt4copyIN9__gnu_cxx17__normal_iteratorIPP8SPoint3DSt6vectorIS3_SaIS3_EEEES8_ET0_T_SA_S9_ [231] [228] 0.0 0.01 0.00 20692 ._ZSt10__copy_ni1IN9__gnu_cxx17__normal_iteratorIPP8SPoint3DSt6vectorIS3_SaIS3_EEEES8_ET0_T_SA_S9_11__true_type [228] 0.00 0.00 41384/103460 ._ZNK9__gnu_cxx17__normal_iteratorIPP8SPoint3DSt6vectorIS2_SaIS2_EEE4baseEv [317] 0.00 0.00 20692/20692 ._ZSt10__copy_ni2IPP8SPoint3DN9__gnu_cxx17__normal_iteratorIS2_St6vectorIS1_SaIS1_EEEEET0_T_SA_S9_11__true_type [354] ----------------------------------------------- 0.00 0.01 20692/20692 ._ZNSt6vectorIP8SPoint3DSaIS1_EE13_M_insert_auxEN9__gnu_cxx17__normal_iteratorIPS1_S3_EERKS1_ [184] [229] 0.0 0.00 0.01 20692 ._ZSt18uninitialized_copyIN9__gnu_cxx17__normal_iteratorIPP8SPoint3DSt6vectorIS3_SaIS3_EEEES8_ET0_T_SA_S9_ [229] 0.00 0.01 20692/20692 ._ZSt24__uninitialized_copy_auxIN9__gnu_cxx17__normal_iteratorIPP8SPoint3DSt6vectorIS3_SaIS3_EEEES8_ET0_T_SA_S9_11__true_type [230] ----------------------------------------------- 0.00 0.01 20692/20692 ._ZSt18uninitialized_copyIN9__gnu_cxx17__normal_iteratorIPP8SPoint3DSt6vectorIS3_SaIS3_EEEES8_ET0_T_SA_S9_ [229] [230] 0.0 0.00 0.01 20692 ._ZSt24__uninitialized_copy_auxIN9__gnu_cxx17__normal_iteratorIPP8SPoint3DSt6vectorIS3_SaIS3_EEEES8_ET0_T_SA_S9_11__true_type [230] 0.00 0.01 20692/20692 ._ZSt4copyIN9__gnu_cxx17__normal_iteratorIPP8SPoint3DSt6vectorIS3_SaIS3_EEEES8_ET0_T_SA_S9_ [231] ----------------------------------------------- 0.00 0.01 20692/20692 ._ZSt24__uninitialized_copy_auxIN9__gnu_cxx17__normal_iteratorIPP8SPoint3DSt6vectorIS3_SaIS3_EEEES8_ET0_T_SA_S9_11__true_type [230] [231] 0.0 0.00 0.01 20692 ._ZSt4copyIN9__gnu_cxx17__normal_iteratorIPP8SPoint3DSt6vectorIS3_SaIS3_EEEES8_ET0_T_SA_S9_ [231] 0.01 0.00 20692/20692 ._ZSt10__copy_ni1IN9__gnu_cxx17__normal_iteratorIPP8SPoint3DSt6vectorIS3_SaIS3_EEEES8_ET0_T_SA_S9_11__true_type [228] ----------------------------------------------- 0.01 0.00 14008/14008 ._ZN17PdbidPointListMap4readEPKc [98] [232] 0.0 0.01 0.00 14008 ._ZN5Point5parseEPcS0_ [232] ----------------------------------------------- 0.01 0.00 12589/12589 ._ZNSt6vectorIP5PointSaIS1_EE13_M_insert_auxEN9__gnu_cxx17__normal_iteratorIPS1_S3_EERKS1_ [135] [233] 0.0 0.01 0.00 12589 ._ZN9__gnu_cxx17__normal_iteratorIPP5PointSt6vectorIS2_SaIS2_EEEppEv [233] ----------------------------------------------- 0.01 0.00 1840/1840 ._ZSt8_DestroyIPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEEvT_SD_ [117] [234] 0.0 0.01 0.00 1840 ._ZSt13__destroy_auxIPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEEvT_SD_11__true_type [234] ----------------------------------------------- 0.00 0.01 869/869 ._ZSt4copyIN9__gnu_cxx17__normal_iteratorIPPNS0_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESt6vectorISC_SaISC_EEEESD_ET0_T_SJ_SI_ [241] [235] 0.0 0.00 0.01 869 ._ZSt10__copy_ni1IN9__gnu_cxx17__normal_iteratorIPPNS0_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESt6vectorISC_SaISC_EEEESD_ET0_T_SJ_SI_11__true_type [235] 0.00 0.01 869/1738 ._ZSt10__copy_ni2IPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESC_ET0_T_SE_SD_12__false_type [174] 0.00 0.00 1738/5214 ._ZNK9__gnu_cxx17__normal_iteratorIPPNS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESt6vectorISB_SaISB_EEE4baseEv [427] ----------------------------------------------- 0.00 0.01 869/869 ._ZSt4copyIPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESC_ET0_T_SE_SD_ [242] [236] 0.0 0.00 0.01 869 ._ZSt10__copy_ni1IPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESC_ET0_T_SE_SD_12__false_type [236] 0.00 0.01 869/1738 ._ZSt10__copy_ni2IPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESC_ET0_T_SE_SD_12__false_type [174] ----------------------------------------------- 0.00 0.01 869/869 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE14_M_fill_insertENS0_17__normal_iteratorIPSB_SD_EEmRKSB_ [199] [237] 0.0 0.00 0.01 869 ._ZSt18uninitialized_copyIN9__gnu_cxx17__normal_iteratorIPPNS0_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESt6vectorISC_SaISC_EEEESD_ET0_T_SJ_SI_ [237] 0.00 0.01 869/869 ._ZSt24__uninitialized_copy_auxIN9__gnu_cxx17__normal_iteratorIPPNS0_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESt6vectorISC_SaISC_EEEESD_ET0_T_SJ_SI_11__true_type [239] ----------------------------------------------- 0.00 0.01 869/869 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE20_M_allocate_and_copyIPSB_EESF_mT_SG_ [177] [238] 0.0 0.00 0.01 869 ._ZSt18uninitialized_copyIPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESC_ET0_T_SE_SD_ [238] 0.00 0.01 869/869 ._ZSt24__uninitialized_copy_auxIPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESC_ET0_T_SE_SD_11__true_type [240] ----------------------------------------------- 0.00 0.01 869/869 ._ZSt18uninitialized_copyIN9__gnu_cxx17__normal_iteratorIPPNS0_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESt6vectorISC_SaISC_EEEESD_ET0_T_SJ_SI_ [237] [239] 0.0 0.00 0.01 869 ._ZSt24__uninitialized_copy_auxIN9__gnu_cxx17__normal_iteratorIPPNS0_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESt6vectorISC_SaISC_EEEESD_ET0_T_SJ_SI_11__true_type [239] 0.00 0.01 869/869 ._ZSt4copyIN9__gnu_cxx17__normal_iteratorIPPNS0_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESt6vectorISC_SaISC_EEEESD_ET0_T_SJ_SI_ [241] ----------------------------------------------- 0.00 0.01 869/869 ._ZSt18uninitialized_copyIPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESC_ET0_T_SE_SD_ [238] [240] 0.0 0.00 0.01 869 ._ZSt24__uninitialized_copy_auxIPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESC_ET0_T_SE_SD_11__true_type [240] 0.00 0.01 869/869 ._ZSt4copyIPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESC_ET0_T_SE_SD_ [242] ----------------------------------------------- 0.00 0.01 869/869 ._ZSt24__uninitialized_copy_auxIN9__gnu_cxx17__normal_iteratorIPPNS0_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESt6vectorISC_SaISC_EEEESD_ET0_T_SJ_SI_11__true_type [239] [241] 0.0 0.00 0.01 869 ._ZSt4copyIN9__gnu_cxx17__normal_iteratorIPPNS0_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESt6vectorISC_SaISC_EEEESD_ET0_T_SJ_SI_ [241] 0.00 0.01 869/869 ._ZSt10__copy_ni1IN9__gnu_cxx17__normal_iteratorIPPNS0_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESt6vectorISC_SaISC_EEEESD_ET0_T_SJ_SI_11__true_type [235] ----------------------------------------------- 0.00 0.01 869/869 ._ZSt24__uninitialized_copy_auxIPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESC_ET0_T_SE_SD_11__true_type [240] [242] 0.0 0.00 0.01 869 ._ZSt4copyIPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESC_ET0_T_SE_SD_ [242] 0.00 0.01 869/869 ._ZSt10__copy_ni1IPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESC_ET0_T_SE_SD_12__false_type [236] ----------------------------------------------- [243] 0.0 0.01 0.00 ._Z10ParseFloatPfPKcii [243] ----------------------------------------------- [244] 0.0 0.01 0.00 ._Z10ParseQuotePcPKcii [244] ----------------------------------------------- [245] 0.0 0.01 0.00 ._ZN10CAtomArray5WriteEPKc [245] ----------------------------------------------- [246] 0.0 0.01 0.00 ._ZN10CStdioFile5CloseEv [246] ----------------------------------------------- [247] 0.0 0.01 0.00 ._ZN8CObArray9FreeExtraEv [247] ----------------------------------------------- [248] 0.0 0.01 0.00 ._ZN8SPoint3DC1ERKS_ [248] ----------------------------------------------- [249] 0.0 0.01 0.00 ._ZNK9__gnu_cxx8hash_mapIN8Neighbor4CellEP11SuperVectorIiENS2_4HashENS2_5EqualESaIS5_EE5beginEv [249] ----------------------------------------------- [250] 0.0 0.01 0.00 ._ZSt13copy_backwardIN9__gnu_cxx17__normal_iteratorIPPNS0_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESt6vectorISC_SaISC_EEEESH_ET0_T_SJ_SI_ [250] ----------------------------------------------- [251] 0.0 0.01 0.00 ._ZSt14__copy_trivialIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKPKcS4_EEEEPT_PKS9_SC_SA_ [251] ----------------------------------------------- 0.00 0.00 6486/13035 ._ZN9__gnu_cxx19_Hashtable_iteratorISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EEppEv [159] 0.00 0.00 6549/13035 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE14find_or_insertERKS5_ [153] [252] 0.0 0.00 0.01 13035 ._ZNK9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE10_M_bkt_numERKS5_ [252] 0.00 0.01 13035/27912 ._ZNK9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE14_M_bkt_num_keyERS2_ [157] 0.00 0.00 13035/34995 ._ZNKSt10_Select1stISt4pairIKSsP9PointListEEclERKS4_ [342] ----------------------------------------------- 0.00 0.01 20470/20470 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE6resizeEm [43] [253] 0.0 0.00 0.01 20470 ._ZNK9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE10_M_bkt_numERKS8_m [253] 0.00 0.00 20470/3054393 ._ZNK9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE14_M_bkt_num_keyERS4_m [26] 0.00 0.00 20470/4837861 ._ZNKSt10_Select1stISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEclERKS7_ [160] ----------------------------------------------- 0.00 0.00 1/6550 ._ZN7StrList10extendCopyEPcPKc [292] 0.00 0.01 6549/6550 ._ZN7StrList10appendCopyEPKc [256] [254] 0.0 0.00 0.01 6550 ._ZNSt6vectorIPcSaIS0_EE9push_backERKS0_ [254] 0.00 0.00 6535/6550 ._ZSt10_ConstructIPcS0_EvPT_RKT0_ [255] 0.00 0.00 15/15 ._ZNSt6vectorIPcSaIS0_EE13_M_insert_auxEN9__gnu_cxx17__normal_iteratorIPS0_S2_EERKS0_ [289] 0.00 0.00 15/8320 ._ZNSt6vectorIPcSaIS0_EE3endEv [390] ----------------------------------------------- 0.00 0.00 15/6550 ._ZNSt6vectorIPcSaIS0_EE13_M_insert_auxEN9__gnu_cxx17__normal_iteratorIPS0_S2_EERKS0_ [289] 0.00 0.00 6535/6550 ._ZNSt6vectorIPcSaIS0_EE9push_backERKS0_ [254] [255] 0.0 0.01 0.00 6550 ._ZSt10_ConstructIPcS0_EvPT_RKT0_ [255] 0.00 0.00 6550/2902258 ._ZnwmPv [145] ----------------------------------------------- 0.00 0.01 6549/6549 ._ZN9Featurize14ParseArgumentsEiPPc [87] [256] 0.0 0.00 0.01 6549 ._ZN7StrList10appendCopyEPKc [256] 0.00 0.01 6549/6550 ._ZNSt6vectorIPcSaIS0_EE9push_backERKS0_ [254] ----------------------------------------------- 0.01 0.00 459891/459891 ._ZNKSt6vectorIiSaIiEE4sizeEv [89] [257] 0.0 0.01 0.00 459891 ._ZN9__gnu_cxxmiIPKiS2_St6vectorIiSaIiEEEENS_17__normal_iteratorIT_T1_E15difference_typeERKS9_RKNS6_IT0_S8_EE [257] 0.00 0.00 919782/919782 ._ZNK9__gnu_cxx17__normal_iteratorIPKiSt6vectorIiSaIiEEE4baseEv [302] ----------------------------------------------- 0.01 0.00 137753/137753 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EEixEm [211] [258] 0.0 0.01 0.00 137753 ._ZNK9__gnu_cxx17__normal_iteratorIPPNS_15_Hashtable_nodeISt4pairIKSsP9PointListEEESt6vectorIS8_SaIS8_EEEplERKl [258] 0.00 0.00 137753/275509 ._ZN9__gnu_cxx17__normal_iteratorIPPNS_15_Hashtable_nodeISt4pairIKSsP9PointListEEESt6vectorIS8_SaIS8_EEEC1ERKS9_ [310] ----------------------------------------------- 0.01 0.00 137753/137753 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EEixEm [211] [259] 0.0 0.01 0.00 137753 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE5beginEv [259] 0.00 0.00 137753/275509 ._ZN9__gnu_cxx17__normal_iteratorIPPNS_15_Hashtable_nodeISt4pairIKSsP9PointListEEESt6vectorIS8_SaIS8_EEEC1ERKS9_ [310] ----------------------------------------------- 0.01 0.00 869/869 ._ZN8CProtein11ReadPDBFileEPKc [8] [260] 0.0 0.01 0.00 869 ._ZN11CLISPParserD1Ev [260] 0.00 0.00 869/869 ._ZN7CParserD2Ev [459] ----------------------------------------------- [261] 0.0 0.01 0.00 ._ZSt37__copy_backward_input_normal_iteratorIN9__gnu_cxx17__normal_iteratorIPP8SPoint3DSt6vectorIS3_SaIS3_EEEES8_ET0_T_SA_S9_11__true_type [261] ----------------------------------------------- 0.00 0.00 12124/12124 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE6resizeEm [182] [262] 0.0 0.00 0.00 12124 ._ZNK9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE10_M_bkt_numERKS5_m [262] 0.00 0.00 12124/40036 ._ZNK9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE14_M_bkt_num_keyERS2_m [220] 0.00 0.00 12124/34995 ._ZNKSt10_Select1stISt4pairIKSsP9PointListEEclERKS4_ [342] ----------------------------------------------- 0.00 0.00 869/869 ._ZN9Featurize23RunPointEnvironmentModeEv [4] [263] 0.0 0.00 0.00 869 ._ZN17PdbidPointListMap12GetPointListEPKc [263] 0.00 0.00 869/14877 ._ZN17PdbidPointListMap6lookupESsb [130] ----------------------------------------------- 0.00 0.00 869/869 ._ZN10CAtomArray18ExtractMarkedAtomsEi [33] [264] 0.0 0.00 0.00 869 ._ZN10CAtomArrayC1Ev [264] 0.00 0.00 869/5214 ._ZN8CObArrayC1Ev [198] 0.00 0.00 869/4167036 ._ZN14CProteinObjectC2Ev [74] ----------------------------------------------- 0.00 0.00 869/869 ._ZN8CProteinC1EPKc [7] [265] 0.0 0.00 0.00 869 ._ZN10CAtomArrayC2Ev [265] 0.00 0.00 869/5214 ._ZN8CObArrayC1Ev [198] 0.00 0.00 869/4167036 ._ZN14CProteinObjectC2Ev [74] ----------------------------------------------- 0.00 0.00 869/869 ._ZN8NeighborD1Ev [45] [266] 0.0 0.00 0.00 869 ._ZN9__gnu_cxx8hash_mapIN8Neighbor4CellEP11SuperVectorIiENS2_4HashENS2_5EqualESaIS5_EE5beginEv [266] 0.00 0.00 869/869 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE5beginEv [267] ----------------------------------------------- 0.00 0.00 869/869 ._ZN9__gnu_cxx8hash_mapIN8Neighbor4CellEP11SuperVectorIiENS2_4HashENS2_5EqualESaIS5_EE5beginEv [266] [267] 0.0 0.00 0.00 869 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE5beginEv [267] 0.00 0.00 4762/2293831 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EEixEm [47] 0.00 0.00 3893/4939382 ._ZNKSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE4sizeEv [30] 0.00 0.00 869/1627015 ._ZN9__gnu_cxx19_Hashtable_iteratorISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EEC1EPNS_15_Hashtable_nodeIS8_EEPNS_9hashtableIS8_S3_S9_SB_SC_SD_EE [164] ----------------------------------------------- 0.00 0.00 100184/100184 ._ZN8NeighborD1Ev [45] [268] 0.0 0.00 0.00 100184 ._ZN9__gnu_cxx8hash_mapIN8Neighbor4CellEP11SuperVectorIiENS2_4HashENS2_5EqualESaIS5_EE3endEv [268] 0.00 0.00 100184/100184 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE3endEv [269] ----------------------------------------------- 0.00 0.00 100184/100184 ._ZN9__gnu_cxx8hash_mapIN8Neighbor4CellEP11SuperVectorIiENS2_4HashENS2_5EqualESaIS5_EE3endEv [268] [269] 0.0 0.00 0.00 100184 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE3endEv [269] 0.00 0.00 100184/1627015 ._ZN9__gnu_cxx19_Hashtable_iteratorISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EEC1EPNS_15_Hashtable_nodeIS8_EEPNS_9hashtableIS8_S3_S9_SB_SC_SD_EE [164] ----------------------------------------------- 0.00 0.00 99315/99315 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE11_M_new_nodeERKS8_ [156] [270] 0.0 0.00 0.00 99315 ._ZSt10_ConstructISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES7_EvPT_RKT0_ [270] 0.00 0.00 99315/2902258 ._ZnwmPv [145] ----------------------------------------------- 0.00 0.00 26920/65649 ._ZNSt6vectorIiSaIiEE15_M_range_insertIN9__gnu_cxx17__normal_iteratorIPiS1_EEEEvS6_T_S7_St20forward_iterator_tag [102] 0.00 0.00 38729/65649 ._ZSt10__distanceIN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEEENSt15iterator_traitsIT_E15difference_typeES8_S8_St26random_access_iterator_tag [195] [271] 0.0 0.00 0.00 65649 ._ZN9__gnu_cxxmiIPiS1_St6vectorIiSaIiEEEENS_17__normal_iteratorIT_T1_E15difference_typeERKS8_RKNS5_IT0_S7_EE [271] 0.00 0.00 131298/5001984 ._ZNK9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEE4baseEv [137] ----------------------------------------------- 0.00 0.00 10346/10346 ._ZNSt6vectorIP8SPoint3DSaIS1_EE13_M_insert_auxEN9__gnu_cxx17__normal_iteratorIPS1_S3_EERKS1_ [184] [272] 0.0 0.00 0.00 10346 ._ZNKSt6vectorIP8SPoint3DSaIS1_EE4sizeEv [272] 0.00 0.00 10346/1399133 ._ZNKSt6vectorIP8SPoint3DSaIS1_EE3endEv [95] 0.00 0.00 10346/10346 ._ZN9__gnu_cxxmiIPKP8SPoint3DS4_St6vectorIS2_SaIS2_EEEENS_17__normal_iteratorIT_T1_E15difference_typeERKSB_RKNS8_IT0_SA_EE [280] 0.00 0.00 10346/11215 ._ZNKSt6vectorIP8SPoint3DSaIS1_EE5beginEv [283] ----------------------------------------------- 0.00 0.00 53840/53840 ._ZSt4copyIN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEES2_ET0_T_S8_S7_ [275] [273] 0.0 0.00 0.00 53840 ._ZSt10__copy_ni1IN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEES2_ET0_T_S8_S7_11__true_type [273] 0.00 0.00 107680/5001984 ._ZNK9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEE4baseEv [137] 0.00 0.00 53840/53840 ._ZSt10__copy_ni2IPiS0_ET0_T_S2_S1_12__false_type [336] ----------------------------------------------- 0.00 0.00 53840/53840 ._ZSt18uninitialized_copyIN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEES2_ET0_T_S8_S7_ [193] [274] 0.0 0.00 0.00 53840 ._ZSt24__uninitialized_copy_auxIN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEES2_ET0_T_S8_S7_11__true_type [274] 0.00 0.00 53840/53840 ._ZSt4copyIN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEES2_ET0_T_S8_S7_ [275] ----------------------------------------------- 0.00 0.00 53840/53840 ._ZSt24__uninitialized_copy_auxIN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEES2_ET0_T_S8_S7_11__true_type [274] [275] 0.0 0.00 0.00 53840 ._ZSt4copyIN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEES2_ET0_T_S8_S7_ [275] 0.00 0.00 53840/53840 ._ZSt10__copy_ni1IN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEES2_ET0_T_S8_S7_11__true_type [273] ----------------------------------------------- 0.00 0.00 869/869 ._ZN8CProtein12ParsePDBLineEPKc [12] [276] 0.0 0.00 0.00 869 ._ZN8CProtein11ParseHeaderEPKc [276] 0.00 0.00 869/6669577 ._Z11ParseStringPcPKcii [20] ----------------------------------------------- 0.00 0.00 14008/14008 ._ZN9PointListD1Ev [278] [277] 0.0 0.00 0.00 14008 ._ZN5PointD1Ev [277] 0.00 0.00 14008/4931234 ._ZN8SPoint3DD1Ev [108] ----------------------------------------------- 0.00 0.00 6549/6549 ._ZN17PdbidPointListMapD1Ev [131] [278] 0.0 0.00 0.00 6549 ._ZN9PointListD1Ev [278] 0.00 0.00 14008/14008 ._ZN5PointD1Ev [277] 0.00 0.00 20557/45735 ._ZNSt6vectorIP5PointSaIS1_EE3endEv [337] 0.00 0.00 20557/20557 ._ZN9__gnu_cxxneIPP5PointSt6vectorIS2_SaIS2_EEEEbRKNS_17__normal_iteratorIT_T0_EESC_ [357] 0.00 0.00 14008/15782 ._ZNK9__gnu_cxx17__normal_iteratorIPP5PointSt6vectorIS2_SaIS2_EEEdeEv [360] 0.00 0.00 14008/14008 ._ZN9__gnu_cxx17__normal_iteratorIPP5PointSt6vectorIS2_SaIS2_EEEppEi [363] 0.00 0.00 6549/6549 ._ZN9__gnu_cxx17__normal_iteratorIPP5PointSt6vectorIS2_SaIS2_EEEC1Ev [404] 0.00 0.00 6549/20912 ._ZNSt6vectorIP5PointSaIS1_EE5beginEv [353] 0.00 0.00 6549/6549 ._ZNSt6vectorIP5PointSaIS1_EED1Ev [420] ----------------------------------------------- 0.00 0.00 1419/14008 ._ZNSt6vectorIP5PointSaIS1_EE9push_backERKS1_ [134] 0.00 0.00 12589/14008 ._ZNSt6vectorIP5PointSaIS1_EE13_M_insert_auxEN9__gnu_cxx17__normal_iteratorIPS1_S3_EERKS1_ [135] [279] 0.0 0.00 0.00 14008 ._ZSt10_ConstructIP5PointS1_EvPT_RKT0_ [279] 0.00 0.00 14008/2902258 ._ZnwmPv [145] ----------------------------------------------- 0.00 0.00 10346/10346 ._ZNKSt6vectorIP8SPoint3DSaIS1_EE4sizeEv [272] [280] 0.0 0.00 0.00 10346 ._ZN9__gnu_cxxmiIPKP8SPoint3DS4_St6vectorIS2_SaIS2_EEEENS_17__normal_iteratorIT_T1_E15difference_typeERKSB_RKNS8_IT0_SA_EE [280] 0.00 0.00 20692/2798266 ._ZNK9__gnu_cxx17__normal_iteratorIPKP8SPoint3DSt6vectorIS2_SaIS2_EEE4baseEv [162] ----------------------------------------------- 0.00 0.00 14008/14008 ._ZN17PdbidPointListMap4readEPKc [98] [281] 0.0 0.00 0.00 14008 ._ZN5PointC1Ev [281] 0.00 0.00 14008/14008 ._ZN8SPoint3DC1Eddd [282] ----------------------------------------------- 0.00 0.00 14008/14008 ._ZN5PointC1Ev [281] [282] 0.0 0.00 0.00 14008 ._ZN8SPoint3DC1Eddd [282] 0.00 0.00 14008/9103484 ._ZN7CObjectC2Ev [114] ----------------------------------------------- 0.00 0.00 869/11215 ._ZN8NeighborC1EPK11SuperVectorIP8SPoint3DEf [11] 0.00 0.00 10346/11215 ._ZNKSt6vectorIP8SPoint3DSaIS1_EE4sizeEv [272] [283] 0.0 0.00 0.00 11215 ._ZNKSt6vectorIP8SPoint3DSaIS1_EE5beginEv [283] 0.00 0.00 11215/2798266 ._ZN9__gnu_cxx17__normal_iteratorIPKP8SPoint3DSt6vectorIS2_SaIS2_EEEC1ERKS4_ [161] ----------------------------------------------- 0.00 0.00 6549/6549 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE14find_or_insertERKS5_ [153] [284] 0.0 0.00 0.00 6549 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE11_M_new_nodeERKS5_ [284] 0.00 0.00 6549/6549 ._ZSt10_ConstructISt4pairIKSsP9PointListES4_EvPT_RKT0_ [285] 0.00 0.00 6549/6549 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE11_M_get_nodeEv [405] ----------------------------------------------- 0.00 0.00 6549/6549 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE11_M_new_nodeERKS5_ [284] [285] 0.0 0.00 0.00 6549 ._ZSt10_ConstructISt4pairIKSsP9PointListES4_EvPT_RKT0_ [285] 0.00 0.00 6549/2902258 ._ZnwmPv [145] 0.00 0.00 6549/6549 ._ZNSt4pairIKSsP9PointListEC1ERKS3_ [417] ----------------------------------------------- 0.00 0.00 869/869 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE7reserveEm [128] [286] 0.0 0.00 0.00 869 ._ZNKSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE8capacityEv [286] 0.00 0.00 869/4940251 ._ZN9__gnu_cxxmiIPKPNS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESD_St6vectorISB_SaISB_EEEENS_17__normal_iteratorIT_T1_E15difference_typeERKSK_RKNSH_IT0_SJ_EE [58] 0.00 0.00 869/6376067 ._ZNKSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE5beginEv [53] 0.00 0.00 869/12752134 ._ZN9__gnu_cxx17__normal_iteratorIPKPNS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESt6vectorISB_SaISB_EEEC1ERKSD_ [85] ----------------------------------------------- 0.00 0.00 869/5214 ._ZN10CAtomArrayD2Ev [55] 0.00 0.00 869/5214 ._ZN10CAtomArrayD1Ev [50] 0.00 0.00 3476/5214 ._ZN8CProteinD1Ev [36] [287] 0.0 0.00 0.00 5214 ._ZN8CObArrayD1Ev [287] 0.00 0.00 5214/9103484 ._ZN7CObjectD2Ev [149] ----------------------------------------------- 0.00 0.00 869/1738 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE21_M_initialize_bucketsEm [121] 0.00 0.00 869/1738 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE14_M_fill_insertENS0_17__normal_iteratorIPSB_SD_EEmRKSB_ [199] [288] 0.0 0.00 0.00 1738 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE3endEv [288] 0.00 0.00 1738/4590269 ._ZN9__gnu_cxx17__normal_iteratorIPPNS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESt6vectorISB_SaISB_EEEC1ERKSC_ [138] ----------------------------------------------- 0.00 0.00 15/15 ._ZNSt6vectorIPcSaIS0_EE9push_backERKS0_ [254] [289] 0.0 0.00 0.00 15 ._ZNSt6vectorIPcSaIS0_EE13_M_insert_auxEN9__gnu_cxx17__normal_iteratorIPS0_S2_EERKS0_ [289] 0.00 0.00 15/6550 ._ZSt10_ConstructIPcS0_EvPT_RKT0_ [255] 0.00 0.00 60/16730 ._ZNK9__gnu_cxx17__normal_iteratorIPPcSt6vectorIS1_SaIS1_EEE4baseEv [359] 0.00 0.00 45/29798 ._ZN9__gnu_cxx17__normal_iteratorIPPcSt6vectorIS1_SaIS1_EEEC1ERKS2_ [343] 0.00 0.00 30/30 ._ZSt18uninitialized_copyIN9__gnu_cxx17__normal_iteratorIPPcSt6vectorIS2_SaIS2_EEEES7_ET0_T_S9_S8_ [504] 0.00 0.00 15/20 ._ZNKSt6vectorIPcSaIS0_EE4sizeEv [509] 0.00 0.00 15/15 ._ZNSt12_Vector_baseIPcSaIS0_EE11_M_allocateEm [515] 0.00 0.00 15/15 ._ZN9__gnu_cxx17__normal_iteratorIPPcSt6vectorIS1_SaIS1_EEEppEv [514] 0.00 0.00 15/7435 ._ZNSt6vectorIPcSaIS0_EE5beginEv [392] 0.00 0.00 15/8320 ._ZNSt6vectorIPcSaIS0_EE3endEv [390] 0.00 0.00 15/15 ._ZSt8_DestroyIN9__gnu_cxx17__normal_iteratorIPPcSt6vectorIS2_SaIS2_EEEEEvT_S8_ [517] 0.00 0.00 15/17 ._ZNSt12_Vector_baseIPcSaIS0_EE13_M_deallocateEPS0_m [511] ----------------------------------------------- 0.00 0.00 1/2 ._ZN17PdbidPointListMapD1Ev [131] 0.00 0.00 1/2 ._ZN17PdbidPointListMap7GetKeysEPPPKcPi [197] [290] 0.0 0.00 0.00 2 ._ZN9__gnu_cxx8hash_mapISsP9PointListNS_4hashISsEESt8equal_toISsESaIS2_EE5beginEv [290] 0.00 0.00 2/2 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE5beginEv [291] ----------------------------------------------- 0.00 0.00 2/2 ._ZN9__gnu_cxx8hash_mapISsP9PointListNS_4hashISsEESt8equal_toISsESaIS2_EE5beginEv [290] [291] 0.0 0.00 0.00 2 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE5beginEv [291] 0.00 0.00 16/71332 ._ZNKSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE4sizeEv [216] 0.00 0.00 18/137753 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EEixEm [211] 0.00 0.00 2/42856 ._ZN9__gnu_cxx19_Hashtable_iteratorISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EEC1EPNS_15_Hashtable_nodeIS5_EEPNS_9hashtableIS5_SsS7_S9_SB_SC_EE [338] ----------------------------------------------- 0.00 0.00 1/1 ._ZN9Featurize14ParseArgumentsEiPPc [87] [292] 0.0 0.00 0.00 1 ._ZN7StrList10extendCopyEPcPKc [292] 0.00 0.00 1/6550 ._ZNSt6vectorIPcSaIS0_EE9push_backERKS0_ [254] ----------------------------------------------- 0.00 0.00 1/1 ._ZN17PdbidPointListMapC1EPKc [97] [293] 0.0 0.00 0.00 1 ._ZN9__gnu_cxx8hash_mapISsP9PointListNS_4hashISsEESt8equal_toISsESaIS2_EEC1Ev [293] 0.00 0.00 1/1 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EEC1EmRKS7_RKSB_RKSC_ [295] 0.00 0.00 1/1 ._ZNSaIP9PointListEC1Ev [591] 0.00 0.00 1/1 ._ZNSaIP9PointListED1Ev [592] ----------------------------------------------- 0.00 0.00 1/1 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EEC1EmRKS7_RKSB_RKSC_ [295] [294] 0.0 0.00 0.00 1 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE21_M_initialize_bucketsEm [294] 0.00 0.00 1/1 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE7reserveEm [296] 0.00 0.00 1/7 ._ZNK9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE12_M_next_sizeEm [525] 0.00 0.00 1/2 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE3endEv [560] 0.00 0.00 1/1 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE6insertENS0_17__normal_iteratorIPS8_SA_EEmRKS8_ [597] ----------------------------------------------- 0.00 0.00 1/1 ._ZN9__gnu_cxx8hash_mapISsP9PointListNS_4hashISsEESt8equal_toISsESaIS2_EEC1Ev [293] [295] 0.0 0.00 0.00 1 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EEC1EmRKS7_RKSB_RKSC_ [295] 0.00 0.00 1/1 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE21_M_initialize_bucketsEm [294] 0.00 0.00 1/1 ._ZNSaIN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEEEC1IS4_EERKSaIT_E [589] 0.00 0.00 1/1 ._ZNSaIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEEEC1IS4_EERKSaIT_E [593] 0.00 0.00 1/1 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EEC1ERKS9_ [598] 0.00 0.00 1/7 ._ZNSaIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEEED1Ev [527] ----------------------------------------------- 0.00 0.00 1/1 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE21_M_initialize_bucketsEm [294] [296] 0.0 0.00 0.00 1 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE7reserveEm [296] 0.00 0.00 1/71332 ._ZNKSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE4sizeEv [216] 0.00 0.00 1/1 ._ZNKSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE8max_sizeEv [588] 0.00 0.00 1/1 ._ZNKSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE8capacityEv [587] 0.00 0.00 1/1 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE20_M_allocate_and_copyIPS8_EESC_mT_SD_ [596] 0.00 0.00 1/8 ._ZSt8_DestroyIPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEEEvT_SA_ [522] 0.00 0.00 1/8 ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE13_M_deallocateEPS8_m [520] ----------------------------------------------- 0.00 0.00 1435816/2871632 ._ZNK9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE3endEv [168] 0.00 0.00 1435816/2871632 ._ZNK9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE4findERS4_ [25] [297] 0.0 0.00 0.00 2871632 ._ZN9__gnu_cxx25_Hashtable_const_iteratorISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EEC1EPKNS_15_Hashtable_nodeIS8_EEPKNS_9hashtableIS8_S3_S9_SB_SC_SD_EE [297] ----------------------------------------------- 0.00 0.00 49672/1437590 ._ZN8Neighbor12GetNeighborsERK8SPoint3D [59] 0.00 0.00 1387918/1437590 ._ZN8NeighborC1EPK11SuperVectorIP8SPoint3DEf [11] [298] 0.0 0.00 0.00 1437590 ._ZN8Neighbor4CellC1Eiii [298] ----------------------------------------------- 0.00 0.00 53840/1008803 ._ZSt10__copy_ni2IPiS0_ET0_T_S2_S1_12__false_type [336] 0.00 0.00 954963/1008803 ._ZSt10__copy_ni2IPiN9__gnu_cxx17__normal_iteratorIS0_St6vectorIiSaIiEEEEET0_T_S8_S7_11__true_type [188] [299] 0.0 0.00 0.00 1008803 ._ZSt11__copy_aux2IiEPT_S1_S1_S1_11__true_type [299] 0.00 0.00 1008803/1008803 ._ZSt14__copy_trivialIiEPT_PKS0_S3_S1_ [300] ----------------------------------------------- 0.00 0.00 1008803/1008803 ._ZSt11__copy_aux2IiEPT_S1_S1_S1_11__true_type [299] [300] 0.0 0.00 0.00 1008803 ._ZSt14__copy_trivialIiEPT_PKS0_S3_S1_ [300] ----------------------------------------------- 0.00 0.00 459891/919782 ._ZNKSt6vectorIiSaIiEE3endEv [206] 0.00 0.00 459891/919782 ._ZNKSt6vectorIiSaIiEE5beginEv [186] [301] 0.0 0.00 0.00 919782 ._ZN9__gnu_cxx17__normal_iteratorIPKiSt6vectorIiSaIiEEEC1ERKS2_ [301] ----------------------------------------------- 0.00 0.00 919782/919782 ._ZN9__gnu_cxxmiIPKiS2_St6vectorIiSaIiEEEENS_17__normal_iteratorIT_T1_E15difference_typeERKS9_RKNS6_IT0_S8_EE [257] [302] 0.0 0.00 0.00 919782 ._ZNK9__gnu_cxx17__normal_iteratorIPKiSt6vectorIiSaIiEEE4baseEv [302] ----------------------------------------------- 0.00 0.00 751928/751928 ._ZN15SAtomProperties23CalculateAtomPropertiesEP5SAtom [21] [303] 0.0 0.00 0.00 751928 ._ZN15SAtomProperties7SetNameEP5SAtom [303] ----------------------------------------------- 0.00 0.00 5/639603 ._ZN9Featurize14DumpParametersEi [576] 0.00 0.00 869/639603 ._Z10MarkHetatmP10CAtomArray [37] 0.00 0.00 1738/639603 ._ZN9Featurize23RunPointEnvironmentModeEv [4] 0.00 0.00 636991/639603 ._Z8FindFilePcPPKcS2_S2_S2_ [82] [304] 0.0 0.00 0.00 639603 ._Z5debugiPcz [304] ----------------------------------------------- 0.00 0.00 11809/559206 ._ZNSt6vectorIiSaIiEE15_M_range_insertIN9__gnu_cxx17__normal_iteratorIPiS1_EEEEvS6_T_S7_St20forward_iterator_tag [102] 0.00 0.00 101089/559206 ._ZNSt12_Vector_baseIiSaIiEED2Ev [171] 0.00 0.00 446308/559206 ._ZNSt6vectorIiSaIiEE13_M_insert_auxEN9__gnu_cxx17__normal_iteratorIPiS1_EERKi [41] [305] 0.0 0.00 0.00 559206 ._ZNSt12_Vector_baseIiSaIiEE13_M_deallocateEPim [305] 0.00 0.00 458117/458117 ._ZN9__gnu_cxx13new_allocatorIiE10deallocateEPim [308] ----------------------------------------------- 0.00 0.00 468336/468336 ._Z16PrintEnvironmentR16CPropertiesArrayP8_IO_FILE [142] [306] 0.0 0.00 0.00 468336 ._ZN16CPropertiesArray16GetPropertyValueEi [306] 0.00 0.00 468336/468336 ._ZN16CPropertiesArray7GetPropEPii [307] ----------------------------------------------- 0.00 0.00 468336/468336 ._ZN16CPropertiesArray16GetPropertyValueEi [306] [307] 0.0 0.00 0.00 468336 ._ZN16CPropertiesArray7GetPropEPii [307] ----------------------------------------------- 0.00 0.00 458117/458117 ._ZNSt12_Vector_baseIiSaIiEE13_M_deallocateEPim [305] [308] 0.0 0.00 0.00 458117 ._ZN9__gnu_cxx13new_allocatorIiE10deallocateEPim [308] ----------------------------------------------- 0.00 0.00 446308/446308 ._ZSt8_DestroyIN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEEEvT_S7_ [209] [309] 0.0 0.00 0.00 446308 ._ZSt13__destroy_auxIN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEEEvT_S7_11__true_type [309] ----------------------------------------------- 0.00 0.00 1/275509 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE14_M_fill_insertENS0_17__normal_iteratorIPS8_SA_EEmRKS8_ [595] 0.00 0.00 2/275509 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE3endEv [560] 0.00 0.00 137753/275509 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE5beginEv [259] 0.00 0.00 137753/275509 ._ZNK9__gnu_cxx17__normal_iteratorIPPNS_15_Hashtable_nodeISt4pairIKSsP9PointListEEESt6vectorIS8_SaIS8_EEEplERKl [258] [310] 0.0 0.00 0.00 275509 ._ZN9__gnu_cxx17__normal_iteratorIPPNS_15_Hashtable_nodeISt4pairIKSsP9PointListEEESt6vectorIS8_SaIS8_EEEC1ERKS9_ [310] ----------------------------------------------- 0.00 0.00 101089/202178 ._ZNSaIiED1Ev [321] 0.00 0.00 101089/202178 ._ZNSaIiED2Ev [322] [311] 0.0 0.00 0.00 202178 ._ZN9__gnu_cxx13new_allocatorIiED2Ev [311] ----------------------------------------------- 0.00 0.00 25178/167004 ._ZSt10__copy_ni2IPP5PointN9__gnu_cxx17__normal_iteratorIS2_St6vectorIS1_SaIS1_EEEEET0_T_SA_S9_11__true_type [222] 0.00 0.00 41114/167004 ._ZN9__gnu_cxxneIPP5PointSt6vectorIS2_SaIS2_EEEEbRKNS_17__normal_iteratorIT_T0_EESC_ [357] 0.00 0.00 50356/167004 ._ZNSt6vectorIP5PointSaIS1_EE13_M_insert_auxEN9__gnu_cxx17__normal_iteratorIPS1_S3_EERKS1_ [135] 0.00 0.00 50356/167004 ._ZSt10__copy_ni1IN9__gnu_cxx17__normal_iteratorIPP5PointSt6vectorIS3_SaIS3_EEEES8_ET0_T_SA_S9_11__true_type [221] [312] 0.0 0.00 0.00 167004 ._ZNK9__gnu_cxx17__normal_iteratorIPP5PointSt6vectorIS2_SaIS2_EEE4baseEv [312] ----------------------------------------------- 0.00 0.00 1774/145374 ._ZNK9__gnu_cxx17__normal_iteratorIPP5PointSt6vectorIS2_SaIS2_EEEplERKl [434] 0.00 0.00 14008/145374 ._ZN9__gnu_cxx17__normal_iteratorIPP5PointSt6vectorIS2_SaIS2_EEEppEi [363] 0.00 0.00 20912/145374 ._ZNSt6vectorIP5PointSaIS1_EE5beginEv [353] 0.00 0.00 25178/145374 ._ZSt10__copy_ni2IPP5PointN9__gnu_cxx17__normal_iteratorIS2_St6vectorIS1_SaIS1_EEEEET0_T_SA_S9_11__true_type [222] 0.00 0.00 37767/145374 ._ZNSt6vectorIP5PointSaIS1_EE13_M_insert_auxEN9__gnu_cxx17__normal_iteratorIPS1_S3_EERKS1_ [135] 0.00 0.00 45735/145374 ._ZNSt6vectorIP5PointSaIS1_EE3endEv [337] [313] 0.0 0.00 0.00 145374 ._ZN9__gnu_cxx17__normal_iteratorIPP5PointSt6vectorIS2_SaIS2_EEEC1ERKS3_ [313] ----------------------------------------------- 0.00 0.00 1/142666 ._ZNKSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE8capacityEv [587] 0.00 0.00 71332/142666 ._ZNKSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE3endEv [334] 0.00 0.00 71333/142666 ._ZNKSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE5beginEv [333] [314] 0.0 0.00 0.00 142666 ._ZN9__gnu_cxx17__normal_iteratorIPKPNS_15_Hashtable_nodeISt4pairIKSsP9PointListEEESt6vectorIS8_SaIS8_EEEC1ERKSA_ [314] ----------------------------------------------- 0.00 0.00 142666/142666 ._ZN9__gnu_cxxmiIPKPNS_15_Hashtable_nodeISt4pairIKSsP9PointListEEESA_St6vectorIS8_SaIS8_EEEENS_17__normal_iteratorIT_T1_E15difference_typeERKSH_RKNSE_IT0_SG_EE [332] [315] 0.0 0.00 0.00 142666 ._ZNK9__gnu_cxx17__normal_iteratorIPKPNS_15_Hashtable_nodeISt4pairIKSsP9PointListEEESt6vectorIS8_SaIS8_EEE4baseEv [315] ----------------------------------------------- 0.00 0.00 137753/137753 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EEixEm [211] [316] 0.0 0.00 0.00 137753 ._ZNK9__gnu_cxx17__normal_iteratorIPPNS_15_Hashtable_nodeISt4pairIKSsP9PointListEEESt6vectorIS8_SaIS8_EEEdeEv [316] ----------------------------------------------- 0.00 0.00 20692/103460 ._ZSt10__copy_ni2IPP8SPoint3DN9__gnu_cxx17__normal_iteratorIS2_St6vectorIS1_SaIS1_EEEEET0_T_SA_S9_11__true_type [354] 0.00 0.00 41384/103460 ._ZNSt6vectorIP8SPoint3DSaIS1_EE13_M_insert_auxEN9__gnu_cxx17__normal_iteratorIPS1_S3_EERKS1_ [184] 0.00 0.00 41384/103460 ._ZSt10__copy_ni1IN9__gnu_cxx17__normal_iteratorIPP8SPoint3DSt6vectorIS3_SaIS3_EEEES8_ET0_T_SA_S9_11__true_type [228] [317] 0.0 0.00 0.00 103460 ._ZNK9__gnu_cxx17__normal_iteratorIPP8SPoint3DSt6vectorIS2_SaIS2_EEE4baseEv [317] ----------------------------------------------- 0.00 0.00 101089/101089 ._ZNSaIiEC2ERKS_ [320] [318] 0.0 0.00 0.00 101089 ._ZN9__gnu_cxx13new_allocatorIiEC2ERKS1_ [318] ----------------------------------------------- 0.00 0.00 101089/101089 ._ZNSaIiEC1Ev [213] [319] 0.0 0.00 0.00 101089 ._ZN9__gnu_cxx13new_allocatorIiEC2Ev [319] ----------------------------------------------- 0.00 0.00 101089/101089 ._ZNSt12_Vector_baseIiSaIiEE12_Vector_implC1ERKS0_ [323] [320] 0.0 0.00 0.00 101089 ._ZNSaIiEC2ERKS_ [320] 0.00 0.00 101089/101089 ._ZN9__gnu_cxx13new_allocatorIiEC2ERKS1_ [318] ----------------------------------------------- 0.00 0.00 101089/101089 ._ZN11SuperVectorIiEC1Ev [151] [321] 0.0 0.00 0.00 101089 ._ZNSaIiED1Ev [321] 0.00 0.00 101089/202178 ._ZN9__gnu_cxx13new_allocatorIiED2Ev [311] ----------------------------------------------- 0.00 0.00 101089/101089 ._ZNSt12_Vector_baseIiSaIiEE12_Vector_implD1Ev [324] [322] 0.0 0.00 0.00 101089 ._ZNSaIiED2Ev [322] 0.00 0.00 101089/202178 ._ZN9__gnu_cxx13new_allocatorIiED2Ev [311] ----------------------------------------------- 0.00 0.00 101089/101089 ._ZNSt12_Vector_baseIiSaIiEEC2ERKS0_ [325] [323] 0.0 0.00 0.00 101089 ._ZNSt12_Vector_baseIiSaIiEE12_Vector_implC1ERKS0_ [323] 0.00 0.00 101089/101089 ._ZNSaIiEC2ERKS_ [320] ----------------------------------------------- 0.00 0.00 101089/101089 ._ZNSt12_Vector_baseIiSaIiEED2Ev [171] [324] 0.0 0.00 0.00 101089 ._ZNSt12_Vector_baseIiSaIiEE12_Vector_implD1Ev [324] 0.00 0.00 101089/101089 ._ZNSaIiED2Ev [322] ----------------------------------------------- 0.00 0.00 101089/101089 ._ZNSt6vectorIiSaIiEEC2ERKS0_ [214] [325] 0.0 0.00 0.00 101089 ._ZNSt12_Vector_baseIiSaIiEEC2ERKS0_ [325] 0.00 0.00 101089/101089 ._ZNSt12_Vector_baseIiSaIiEE12_Vector_implC1ERKS0_ [323] ----------------------------------------------- 0.00 0.00 100184/100184 ._ZN8NeighborD1Ev [45] [326] 0.0 0.00 0.00 100184 ._ZNK9__gnu_cxx19_Hashtable_iteratorISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EEneERKSE_ [326] ----------------------------------------------- 0.00 0.00 99315/99315 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE11_M_put_nodeEPNS_15_Hashtable_nodeIS8_EE [329] [327] 0.0 0.00 0.00 99315 ._ZN9__gnu_cxx13new_allocatorINS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEE10deallocateEPSA_m [327] ----------------------------------------------- 0.00 0.00 99315/99315 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._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE14_M_delete_nodeEPNS_15_Hashtable_nodeIS8_EE [172] [330] 0.0 0.00 0.00 99315 ._ZSt8_DestroyISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEvPT_ [330] ----------------------------------------------- 0.00 0.00 10346/82768 ._ZNSt6vectorIP8SPoint3DSaIS1_EE5beginEv [387] 0.00 0.00 20692/82768 ._ZNSt6vectorIP8SPoint3DSaIS1_EE3endEv [227] 0.00 0.00 20692/82768 ._ZSt10__copy_ni2IPP8SPoint3DN9__gnu_cxx17__normal_iteratorIS2_St6vectorIS1_SaIS1_EEEEET0_T_SA_S9_11__true_type [354] 0.00 0.00 31038/82768 ._ZNSt6vectorIP8SPoint3DSaIS1_EE13_M_insert_auxEN9__gnu_cxx17__normal_iteratorIPS1_S3_EERKS1_ [184] [331] 0.0 0.00 0.00 82768 ._ZN9__gnu_cxx17__normal_iteratorIPP8SPoint3DSt6vectorIS2_SaIS2_EEEC1ERKS3_ [331] ----------------------------------------------- 0.00 0.00 1/71333 ._ZNKSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE8capacityEv [587] 0.00 0.00 71332/71333 ._ZNKSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE4sizeEv [216] [332] 0.0 0.00 0.00 71333 ._ZN9__gnu_cxxmiIPKPNS_15_Hashtable_nodeISt4pairIKSsP9PointListEEESA_St6vectorIS8_SaIS8_EEEENS_17__normal_iteratorIT_T1_E15difference_typeERKSH_RKNSE_IT0_SG_EE [332] 0.00 0.00 142666/142666 ._ZNK9__gnu_cxx17__normal_iteratorIPKPNS_15_Hashtable_nodeISt4pairIKSsP9PointListEEESt6vectorIS8_SaIS8_EEE4baseEv [315] ----------------------------------------------- 0.00 0.00 1/71333 ._ZNKSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE8capacityEv [587] 0.00 0.00 71332/71333 ._ZNKSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE4sizeEv [216] [333] 0.0 0.00 0.00 71333 ._ZNKSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE5beginEv [333] 0.00 0.00 71333/142666 ._ZN9__gnu_cxx17__normal_iteratorIPKPNS_15_Hashtable_nodeISt4pairIKSsP9PointListEEESt6vectorIS8_SaIS8_EEEC1ERKSA_ [314] ----------------------------------------------- 0.00 0.00 71332/71332 ._ZNKSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE4sizeEv [216] [334] 0.0 0.00 0.00 71332 ._ZNKSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE3endEv [334] 0.00 0.00 71332/142666 ._ZN9__gnu_cxx17__normal_iteratorIPKPNS_15_Hashtable_nodeISt4pairIKSsP9PointListEEESt6vectorIS8_SaIS8_EEEC1ERKSA_ [314] ----------------------------------------------- 0.00 0.00 26920/65649 ._ZSt7advanceIN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEEmEvRT_T0_ [347] 0.00 0.00 38729/65649 ._ZSt8distanceIN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEEENSt15iterator_traitsIT_E15difference_typeES8_S8_ [196] [335] 0.0 0.00 0.00 65649 ._ZSt19__iterator_categoryIN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEEENSt15iterator_traitsIT_E17iterator_categoryERKS8_ [335] ----------------------------------------------- 0.00 0.00 53840/53840 ._ZSt10__copy_ni1IN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEES2_ET0_T_S8_S7_11__true_type [273] [336] 0.0 0.00 0.00 53840 ._ZSt10__copy_ni2IPiS0_ET0_T_S2_S1_12__false_type [336] 0.00 0.00 53840/1008803 ._ZSt11__copy_aux2IiEPT_S1_S1_S1_11__true_type [299] ----------------------------------------------- 0.00 0.00 12589/45735 ._ZNSt6vectorIP5PointSaIS1_EE9push_backERKS1_ [134] 0.00 0.00 12589/45735 ._ZNSt6vectorIP5PointSaIS1_EE13_M_insert_auxEN9__gnu_cxx17__normal_iteratorIPS1_S3_EERKS1_ [135] 0.00 0.00 20557/45735 ._ZN9PointListD1Ev [278] [337] 0.0 0.00 0.00 45735 ._ZNSt6vectorIP5PointSaIS1_EE3endEv [337] 0.00 0.00 45735/145374 ._ZN9__gnu_cxx17__normal_iteratorIPP5PointSt6vectorIS2_SaIS2_EEEC1ERKS3_ [313] ----------------------------------------------- 0.00 0.00 2/42856 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE5beginEv [291] 0.00 0.00 14877/42856 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE4findERS2_ [155] 0.00 0.00 27977/42856 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE3endEv [345] [338] 0.0 0.00 0.00 42856 ._ZN9__gnu_cxx19_Hashtable_iteratorISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EEC1EPNS_15_Hashtable_nodeIS5_EEPNS_9hashtableIS5_SsS7_S9_SB_SC_EE [338] ----------------------------------------------- 0.00 0.00 9836/36574 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE14find_or_insertERKS5_ [153] 0.00 0.00 26738/36574 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE4findERS2_ [155] [339] 0.0 0.00 0.00 36574 ._ZNKSt10_Select1stISt4pairIKSsP9PointListEEclERS4_ [339] ----------------------------------------------- 0.00 0.00 9836/36574 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE14find_or_insertERKS5_ [153] 0.00 0.00 26738/36574 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE4findERS2_ [155] [340] 0.0 0.00 0.00 36574 ._ZNKSt8equal_toISsEclERKSsS2_ [340] 0.00 0.00 36574/36574 ._ZSteqIcSt11char_traitsIcESaIcEEbRKSbIT_T0_T1_ES8_ [341] ----------------------------------------------- 0.00 0.00 36574/36574 ._ZNKSt8equal_toISsEclERKSsS2_ [340] [341] 0.0 0.00 0.00 36574 ._ZSteqIcSt11char_traitsIcESaIcEEbRKSbIT_T0_T1_ES8_ [341] ----------------------------------------------- 0.00 0.00 9836/34995 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE14find_or_insertERKS5_ [153] 0.00 0.00 12124/34995 ._ZNK9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE10_M_bkt_numERKS5_m [262] 0.00 0.00 13035/34995 ._ZNK9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE10_M_bkt_numERKS5_ [252] [342] 0.0 0.00 0.00 34995 ._ZNKSt10_Select1stISt4pairIKSsP9PointListEEclERKS4_ [342] ----------------------------------------------- 0.00 0.00 30/29798 ._ZSt10__copy_ni2IPPcN9__gnu_cxx17__normal_iteratorIS1_St6vectorIS0_SaIS0_EEEEET0_T_S9_S8_11__true_type [501] 0.00 0.00 45/29798 ._ZNSt6vectorIPcSaIS0_EE13_M_insert_auxEN9__gnu_cxx17__normal_iteratorIPS0_S2_EERKS0_ [289] 0.00 0.00 6549/29798 ._ZNK9__gnu_cxx17__normal_iteratorIPPcSt6vectorIS1_SaIS1_EEEplERKl [408] 0.00 0.00 7419/29798 ._ZN9__gnu_cxx17__normal_iteratorIPPcSt6vectorIS1_SaIS1_EEEppEi [393] 0.00 0.00 7435/29798 ._ZNSt6vectorIPcSaIS0_EE5beginEv [392] 0.00 0.00 8320/29798 ._ZNSt6vectorIPcSaIS0_EE3endEv [390] [343] 0.0 0.00 0.00 29798 ._ZN9__gnu_cxx17__normal_iteratorIPPcSt6vectorIS1_SaIS1_EEEC1ERKS2_ [343] ----------------------------------------------- 0.00 0.00 6550/27977 ._ZN17PdbidPointListMapD1Ev [131] 0.00 0.00 6550/27977 ._ZN17PdbidPointListMap7GetKeysEPPPKcPi [197] 0.00 0.00 14877/27977 ._ZN17PdbidPointListMap6lookupESsb [130] [344] 0.0 0.00 0.00 27977 ._ZN9__gnu_cxx8hash_mapISsP9PointListNS_4hashISsEESt8equal_toISsESaIS2_EE3endEv [344] 0.00 0.00 27977/27977 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE3endEv [345] ----------------------------------------------- 0.00 0.00 27977/27977 ._ZN9__gnu_cxx8hash_mapISsP9PointListNS_4hashISsEESt8equal_toISsESaIS2_EE3endEv [344] [345] 0.0 0.00 0.00 27977 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE3endEv [345] 0.00 0.00 27977/42856 ._ZN9__gnu_cxx19_Hashtable_iteratorISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EEC1EPNS_15_Hashtable_nodeIS5_EEPNS_9hashtableIS5_SsS7_S9_SB_SC_EE [338] ----------------------------------------------- 0.00 0.00 26920/26920 ._ZSt9__advanceIN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEEmEvRT_T0_St26random_access_iterator_tag [348] [346] 0.0 0.00 0.00 26920 ._ZN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEpLERKl [346] ----------------------------------------------- 0.00 0.00 26920/26920 ._ZNSt6vectorIiSaIiEE15_M_range_insertIN9__gnu_cxx17__normal_iteratorIPiS1_EEEEvS6_T_S7_St20forward_iterator_tag [102] [347] 0.0 0.00 0.00 26920 ._ZSt7advanceIN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEEmEvRT_T0_ [347] 0.00 0.00 26920/65649 ._ZSt19__iterator_categoryIN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEEENSt15iterator_traitsIT_E17iterator_categoryERKS8_ [335] 0.00 0.00 26920/26920 ._ZSt9__advanceIN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEEmEvRT_T0_St26random_access_iterator_tag [348] ----------------------------------------------- 0.00 0.00 26920/26920 ._ZSt7advanceIN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEEmEvRT_T0_ [347] [348] 0.0 0.00 0.00 26920 ._ZSt9__advanceIN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEEmEvRT_T0_St26random_access_iterator_tag [348] 0.00 0.00 26920/26920 ._ZN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEpLERKl [346] ----------------------------------------------- 0.00 0.00 13458/26916 ._ZNKSt6vectorIP5PointSaIS1_EE3endEv [366] 0.00 0.00 13458/26916 ._ZNKSt6vectorIP5PointSaIS1_EE5beginEv [368] [349] 0.0 0.00 0.00 26916 ._ZN9__gnu_cxx17__normal_iteratorIPKP5PointSt6vectorIS2_SaIS2_EEEC1ERKS4_ [349] ----------------------------------------------- 0.00 0.00 26916/26916 ._ZN9__gnu_cxxmiIPKP5PointS4_St6vectorIS2_SaIS2_EEEENS_17__normal_iteratorIT_T1_E15difference_typeERKSB_RKNS8_IT0_SA_EE [365] [350] 0.0 0.00 0.00 26916 ._ZNK9__gnu_cxx17__normal_iteratorIPKP5PointSt6vectorIS2_SaIS2_EEE4baseEv [350] ----------------------------------------------- 0.00 0.00 21725/21725 ._ZN8CProtein12ReadDSSPFileEPKc [6] [351] 0.0 0.00 0.00 21725 ._ZSt6strstrPcPKc [351] ----------------------------------------------- 0.00 0.00 6549/21426 ._ZN17PdbidPointListMapD1Ev [131] 0.00 0.00 6549/21426 ._ZN17PdbidPointListMap7GetKeysEPPPKcPi [197] 0.00 0.00 8328/21426 ._ZN17PdbidPointListMap6lookupESsb [130] [352] 0.0 0.00 0.00 21426 ._ZNK9__gnu_cxx19_Hashtable_iteratorISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EEdeEv [352] ----------------------------------------------- 0.00 0.00 1774/20912 ._ZNSt6vectorIP5PointSaIS1_EEixEm [435] 0.00 0.00 6549/20912 ._ZN9PointListD1Ev [278] 0.00 0.00 12589/20912 ._ZNSt6vectorIP5PointSaIS1_EE13_M_insert_auxEN9__gnu_cxx17__normal_iteratorIPS1_S3_EERKS1_ [135] [353] 0.0 0.00 0.00 20912 ._ZNSt6vectorIP5PointSaIS1_EE5beginEv [353] 0.00 0.00 20912/145374 ._ZN9__gnu_cxx17__normal_iteratorIPP5PointSt6vectorIS2_SaIS2_EEEC1ERKS3_ [313] ----------------------------------------------- 0.00 0.00 20692/20692 ._ZSt10__copy_ni1IN9__gnu_cxx17__normal_iteratorIPP8SPoint3DSt6vectorIS3_SaIS3_EEEES8_ET0_T_SA_S9_11__true_type [228] [354] 0.0 0.00 0.00 20692 ._ZSt10__copy_ni2IPP8SPoint3DN9__gnu_cxx17__normal_iteratorIS2_St6vectorIS1_SaIS1_EEEEET0_T_SA_S9_11__true_type [354] 0.00 0.00 20692/103460 ._ZNK9__gnu_cxx17__normal_iteratorIPP8SPoint3DSt6vectorIS2_SaIS2_EEE4baseEv [317] 0.00 0.00 20692/20692 ._ZSt11__copy_aux2IP8SPoint3DEPT_S3_S3_S3_11__true_type [355] 0.00 0.00 20692/82768 ._ZN9__gnu_cxx17__normal_iteratorIPP8SPoint3DSt6vectorIS2_SaIS2_EEEC1ERKS3_ [331] ----------------------------------------------- 0.00 0.00 20692/20692 ._ZSt10__copy_ni2IPP8SPoint3DN9__gnu_cxx17__normal_iteratorIS2_St6vectorIS1_SaIS1_EEEEET0_T_SA_S9_11__true_type [354] [355] 0.0 0.00 0.00 20692 ._ZSt11__copy_aux2IP8SPoint3DEPT_S3_S3_S3_11__true_type [355] 0.00 0.00 20692/20692 ._ZSt14__copy_trivialIP8SPoint3DEPT_PKS2_S5_S3_ [356] ----------------------------------------------- 0.00 0.00 20692/20692 ._ZSt11__copy_aux2IP8SPoint3DEPT_S3_S3_S3_11__true_type [355] [356] 0.0 0.00 0.00 20692 ._ZSt14__copy_trivialIP8SPoint3DEPT_PKS2_S5_S3_ [356] ----------------------------------------------- 0.00 0.00 20557/20557 ._ZN9PointListD1Ev [278] [357] 0.0 0.00 0.00 20557 ._ZN9__gnu_cxxneIPP5PointSt6vectorIS2_SaIS2_EEEEbRKNS_17__normal_iteratorIT_T0_EESC_ [357] 0.00 0.00 41114/167004 ._ZNK9__gnu_cxx17__normal_iteratorIPP5PointSt6vectorIS2_SaIS2_EEE4baseEv [312] ----------------------------------------------- 0.00 0.00 6549/19138 ._ZNSt12_Vector_baseIP5PointSaIS1_EED2Ev [416] 0.00 0.00 12589/19138 ._ZNSt6vectorIP5PointSaIS1_EE13_M_insert_auxEN9__gnu_cxx17__normal_iteratorIPS1_S3_EERKS1_ [135] [358] 0.0 0.00 0.00 19138 ._ZNSt12_Vector_baseIP5PointSaIS1_EE13_M_deallocateEPS1_m [358] 0.00 0.00 12589/12589 ._ZN9__gnu_cxx13new_allocatorIP5PointE10deallocateEPS2_m [374] ----------------------------------------------- 0.00 0.00 30/16730 ._ZSt10__copy_ni2IPPcN9__gnu_cxx17__normal_iteratorIS1_St6vectorIS0_SaIS0_EEEEET0_T_S9_S8_11__true_type [501] 0.00 0.00 60/16730 ._ZNSt6vectorIPcSaIS0_EE13_M_insert_auxEN9__gnu_cxx17__normal_iteratorIPS0_S2_EERKS0_ [289] 0.00 0.00 60/16730 ._ZSt10__copy_ni1IN9__gnu_cxx17__normal_iteratorIPPcSt6vectorIS2_SaIS2_EEEES7_ET0_T_S9_S8_11__true_type [500] 0.00 0.00 16580/16730 ._ZN9__gnu_cxxneIPPcSt6vectorIS1_SaIS1_EEEEbRKNS_17__normal_iteratorIT_T0_EESB_ [391] [359] 0.0 0.00 0.00 16730 ._ZNK9__gnu_cxx17__normal_iteratorIPPcSt6vectorIS1_SaIS1_EEE4baseEv [359] ----------------------------------------------- 0.00 0.00 1774/15782 ._ZNSt6vectorIP5PointSaIS1_EEixEm [435] 0.00 0.00 14008/15782 ._ZN9PointListD1Ev [278] [360] 0.0 0.00 0.00 15782 ._ZNK9__gnu_cxx17__normal_iteratorIPP5PointSt6vectorIS2_SaIS2_EEEdeEv [360] ----------------------------------------------- 0.00 0.00 1/14879 ._ZN17PdbidPointListMapD1Ev [131] 0.00 0.00 1/14879 ._ZN17PdbidPointListMap7GetKeysEPPPKcPi [197] 0.00 0.00 14877/14879 ._ZN17PdbidPointListMap6lookupESsb [130] [361] 0.0 0.00 0.00 14879 ._ZN9__gnu_cxx19_Hashtable_iteratorISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EEC1Ev [361] ----------------------------------------------- 0.00 0.00 14877/14877 ._ZN17PdbidPointListMap6lookupESsb [130] [362] 0.0 0.00 0.00 14877 ._ZNK9__gnu_cxx19_Hashtable_iteratorISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EEeqERKSD_ [362] ----------------------------------------------- 0.00 0.00 14008/14008 ._ZN9PointListD1Ev [278] [363] 0.0 0.00 0.00 14008 ._ZN9__gnu_cxx17__normal_iteratorIPP5PointSt6vectorIS2_SaIS2_EEEppEi [363] 0.00 0.00 14008/145374 ._ZN9__gnu_cxx17__normal_iteratorIPP5PointSt6vectorIS2_SaIS2_EEEC1ERKS3_ [313] ----------------------------------------------- 0.00 0.00 869/13968 ._Z22GetNonExcludedResiduesP10CAtomArrayR7StrList [27] 0.00 0.00 6549/13968 ._ZNSt6vectorIPcSaIS0_EEixEm [421] 0.00 0.00 6550/13968 ._ZN7StrList13destroyCopiesEv [547] [364] 0.0 0.00 0.00 13968 ._ZNK9__gnu_cxx17__normal_iteratorIPPcSt6vectorIS1_SaIS1_EEEdeEv [364] ----------------------------------------------- 0.00 0.00 13458/13458 ._ZNKSt6vectorIP5PointSaIS1_EE4sizeEv [367] [365] 0.0 0.00 0.00 13458 ._ZN9__gnu_cxxmiIPKP5PointS4_St6vectorIS2_SaIS2_EEEENS_17__normal_iteratorIT_T1_E15difference_typeERKSB_RKNS8_IT0_SA_EE [365] 0.00 0.00 26916/26916 ._ZNK9__gnu_cxx17__normal_iteratorIPKP5PointSt6vectorIS2_SaIS2_EEE4baseEv [350] ----------------------------------------------- 0.00 0.00 13458/13458 ._ZNKSt6vectorIP5PointSaIS1_EE4sizeEv [367] [366] 0.0 0.00 0.00 13458 ._ZNKSt6vectorIP5PointSaIS1_EE3endEv [366] 0.00 0.00 13458/26916 ._ZN9__gnu_cxx17__normal_iteratorIPKP5PointSt6vectorIS2_SaIS2_EEEC1ERKS4_ [349] ----------------------------------------------- 0.00 0.00 869/13458 ._ZN9PointList9NumPointsEv [460] 0.00 0.00 12589/13458 ._ZNSt6vectorIP5PointSaIS1_EE13_M_insert_auxEN9__gnu_cxx17__normal_iteratorIPS1_S3_EERKS1_ [135] [367] 0.0 0.00 0.00 13458 ._ZNKSt6vectorIP5PointSaIS1_EE4sizeEv [367] 0.00 0.00 13458/13458 ._ZNKSt6vectorIP5PointSaIS1_EE3endEv [366] 0.00 0.00 13458/13458 ._ZNKSt6vectorIP5PointSaIS1_EE5beginEv [368] 0.00 0.00 13458/13458 ._ZN9__gnu_cxxmiIPKP5PointS4_St6vectorIS2_SaIS2_EEEENS_17__normal_iteratorIT_T1_E15difference_typeERKSB_RKNS8_IT0_SA_EE [365] ----------------------------------------------- 0.00 0.00 13458/13458 ._ZNKSt6vectorIP5PointSaIS1_EE4sizeEv [367] [368] 0.0 0.00 0.00 13458 ._ZNKSt6vectorIP5PointSaIS1_EE5beginEv [368] 0.00 0.00 13458/26916 ._ZN9__gnu_cxx17__normal_iteratorIPKP5PointSt6vectorIS2_SaIS2_EEEC1ERKS4_ [349] ----------------------------------------------- 0.00 0.00 22/13144 ._ZNKSt6vectorIPcSaIS0_EE5beginEv [507] 0.00 0.00 6550/13144 ._ZN9__gnu_cxx17__normal_iteratorIPKPcSt6vectorIS1_SaIS1_EEEppEi [397] 0.00 0.00 6572/13144 ._ZNKSt6vectorIPcSaIS0_EE3endEv [395] [369] 0.0 0.00 0.00 13144 ._ZN9__gnu_cxx17__normal_iteratorIPKPcSt6vectorIS1_SaIS1_EEEC1ERKS3_ [369] ----------------------------------------------- 0.00 0.00 40/13144 ._ZN9__gnu_cxxmiIPKPcS3_St6vectorIS1_SaIS1_EEEENS_17__normal_iteratorIT_T1_E15difference_typeERKSA_RKNS7_IT0_S9_EE [508] 0.00 0.00 13104/13144 ._ZN9__gnu_cxxneIPKPcSt6vectorIS1_SaIS1_EEEEbRKNS_17__normal_iteratorIT_T0_EESC_ [396] [370] 0.0 0.00 0.00 13144 ._ZNK9__gnu_cxx17__normal_iteratorIPKPcSt6vectorIS1_SaIS1_EEE4baseEv [370] ----------------------------------------------- 0.00 0.00 6550/13100 ._ZN17PdbidPointListMapD1Ev [131] 0.00 0.00 6550/13100 ._ZN17PdbidPointListMap7GetKeysEPPPKcPi [197] [371] 0.0 0.00 0.00 13100 ._ZNK9__gnu_cxx19_Hashtable_iteratorISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EEneERKSD_ [371] ----------------------------------------------- 0.00 0.00 6549/13098 ._ZNSaIP5PointED1Ev [411] 0.00 0.00 6549/13098 ._ZNSaIP5PointED2Ev [412] [372] 0.0 0.00 0.00 13098 ._ZN9__gnu_cxx13new_allocatorIP5PointED2Ev [372] ----------------------------------------------- 0.00 0.00 6549/13098 ._ZN9__gnu_cxx8hash_mapISsP9PointListNS_4hashISsEESt8equal_toISsESaIS2_EEixERKSs [152] 0.00 0.00 6549/13098 ._ZSt8_DestroyISt4pairIKSsP9PointListEEvPT_ [424] [373] 0.0 0.00 0.00 13098 ._ZNSt4pairIKSsP9PointListED1Ev [373] ----------------------------------------------- 0.00 0.00 12589/12589 ._ZNSt12_Vector_baseIP5PointSaIS1_EE13_M_deallocateEPS1_m [358] [374] 0.0 0.00 0.00 12589 ._ZN9__gnu_cxx13new_allocatorIP5PointE10deallocateEPS2_m [374] ----------------------------------------------- 0.00 0.00 12589/12589 ._ZNSt12_Vector_baseIP5PointSaIS1_EE11_M_allocateEm [376] [375] 0.0 0.00 0.00 12589 ._ZN9__gnu_cxx13new_allocatorIP5PointE8allocateEmPKv [375] ----------------------------------------------- 0.00 0.00 12589/12589 ._ZNSt6vectorIP5PointSaIS1_EE13_M_insert_auxEN9__gnu_cxx17__normal_iteratorIPS1_S3_EERKS1_ [135] [376] 0.0 0.00 0.00 12589 ._ZNSt12_Vector_baseIP5PointSaIS1_EE11_M_allocateEm [376] 0.00 0.00 12589/12589 ._ZN9__gnu_cxx13new_allocatorIP5PointE8allocateEmPKv [375] ----------------------------------------------- 0.00 0.00 12589/12589 ._ZSt8_DestroyIN9__gnu_cxx17__normal_iteratorIPP5PointSt6vectorIS3_SaIS3_EEEEEvT_S9_ [378] [377] 0.0 0.00 0.00 12589 ._ZSt13__destroy_auxIN9__gnu_cxx17__normal_iteratorIPP5PointSt6vectorIS3_SaIS3_EEEEEvT_S9_11__true_type [377] ----------------------------------------------- 0.00 0.00 12589/12589 ._ZNSt6vectorIP5PointSaIS1_EE13_M_insert_auxEN9__gnu_cxx17__normal_iteratorIPS1_S3_EERKS1_ [135] [378] 0.0 0.00 0.00 12589 ._ZSt8_DestroyIN9__gnu_cxx17__normal_iteratorIPP5PointSt6vectorIS3_SaIS3_EEEEEvT_S9_ [378] 0.00 0.00 12589/12589 ._ZSt13__destroy_auxIN9__gnu_cxx17__normal_iteratorIPP5PointSt6vectorIS3_SaIS3_EEEEEvT_S9_11__true_type [377] ----------------------------------------------- 0.00 0.00 11809/11809 ._ZNSt6vectorIiSaIiEE15_M_range_insertIN9__gnu_cxx17__normal_iteratorIPiS1_EEEEvS6_T_S7_St20forward_iterator_tag [102] [379] 0.0 0.00 0.00 11809 ._ZSt3maxImERKT_S2_S2_ [379] ----------------------------------------------- 0.00 0.00 869/11215 ._ZNSt12_Vector_baseIP8SPoint3DSaIS1_EED2Ev [484] 0.00 0.00 10346/11215 ._ZNSt6vectorIP8SPoint3DSaIS1_EE13_M_insert_auxEN9__gnu_cxx17__normal_iteratorIPS1_S3_EERKS1_ [184] [380] 0.0 0.00 0.00 11215 ._ZNSt12_Vector_baseIP8SPoint3DSaIS1_EE13_M_deallocateEPS1_m [380] 0.00 0.00 10346/10346 ._ZN9__gnu_cxx13new_allocatorIP8SPoint3DE10deallocateEPS2_m [383] ----------------------------------------------- 0.00 0.00 10644/10644 ._ZN9Featurize23RunPointEnvironmentModeEv [4] [381] 0.0 0.00 0.00 10644 ._ZN16CPropertiesArrayC1Ev [381] ----------------------------------------------- 0.00 0.00 10644/10644 ._ZN9Featurize23RunPointEnvironmentModeEv [4] [382] 0.0 0.00 0.00 10644 ._ZN16CPropertiesArrayD1Ev [382] ----------------------------------------------- 0.00 0.00 10346/10346 ._ZNSt12_Vector_baseIP8SPoint3DSaIS1_EE13_M_deallocateEPS1_m [380] [383] 0.0 0.00 0.00 10346 ._ZN9__gnu_cxx13new_allocatorIP8SPoint3DE10deallocateEPS2_m [383] ----------------------------------------------- 0.00 0.00 10346/10346 ._ZNSt12_Vector_baseIP8SPoint3DSaIS1_EE11_M_allocateEm [386] [384] 0.0 0.00 0.00 10346 ._ZN9__gnu_cxx13new_allocatorIP8SPoint3DE8allocateEmPKv [384] ----------------------------------------------- 0.00 0.00 10346/10346 ._ZNSt6vectorIP8SPoint3DSaIS1_EE13_M_insert_auxEN9__gnu_cxx17__normal_iteratorIPS1_S3_EERKS1_ [184] [385] 0.0 0.00 0.00 10346 ._ZN9__gnu_cxx17__normal_iteratorIPP8SPoint3DSt6vectorIS2_SaIS2_EEEppEv [385] ----------------------------------------------- 0.00 0.00 10346/10346 ._ZNSt6vectorIP8SPoint3DSaIS1_EE13_M_insert_auxEN9__gnu_cxx17__normal_iteratorIPS1_S3_EERKS1_ [184] [386] 0.0 0.00 0.00 10346 ._ZNSt12_Vector_baseIP8SPoint3DSaIS1_EE11_M_allocateEm [386] 0.00 0.00 10346/10346 ._ZN9__gnu_cxx13new_allocatorIP8SPoint3DE8allocateEmPKv [384] ----------------------------------------------- 0.00 0.00 10346/10346 ._ZNSt6vectorIP8SPoint3DSaIS1_EE13_M_insert_auxEN9__gnu_cxx17__normal_iteratorIPS1_S3_EERKS1_ [184] [387] 0.0 0.00 0.00 10346 ._ZNSt6vectorIP8SPoint3DSaIS1_EE5beginEv [387] 0.00 0.00 10346/82768 ._ZN9__gnu_cxx17__normal_iteratorIPP8SPoint3DSt6vectorIS2_SaIS2_EEEC1ERKS3_ [331] ----------------------------------------------- 0.00 0.00 10346/10346 ._ZSt8_DestroyIN9__gnu_cxx17__normal_iteratorIPP8SPoint3DSt6vectorIS3_SaIS3_EEEEEvT_S9_ [389] [388] 0.0 0.00 0.00 10346 ._ZSt13__destroy_auxIN9__gnu_cxx17__normal_iteratorIPP8SPoint3DSt6vectorIS3_SaIS3_EEEEEvT_S9_11__true_type [388] ----------------------------------------------- 0.00 0.00 10346/10346 ._ZNSt6vectorIP8SPoint3DSaIS1_EE13_M_insert_auxEN9__gnu_cxx17__normal_iteratorIPS1_S3_EERKS1_ [184] [389] 0.0 0.00 0.00 10346 ._ZSt8_DestroyIN9__gnu_cxx17__normal_iteratorIPP8SPoint3DSt6vectorIS3_SaIS3_EEEEEvT_S9_ [389] 0.00 0.00 10346/10346 ._ZSt13__destroy_auxIN9__gnu_cxx17__normal_iteratorIPP8SPoint3DSt6vectorIS3_SaIS3_EEEEEvT_S9_11__true_type [388] ----------------------------------------------- 0.00 0.00 15/8320 ._ZNSt6vectorIPcSaIS0_EE9push_backERKS0_ [254] 0.00 0.00 15/8320 ._ZNSt6vectorIPcSaIS0_EE13_M_insert_auxEN9__gnu_cxx17__normal_iteratorIPS0_S2_EERKS0_ [289] 0.00 0.00 1738/8320 ._Z22GetNonExcludedResiduesP10CAtomArrayR7StrList [27] 0.00 0.00 6552/8320 ._ZN7StrList13destroyCopiesEv [547] [390] 0.0 0.00 0.00 8320 ._ZNSt6vectorIPcSaIS0_EE3endEv [390] 0.00 0.00 8320/29798 ._ZN9__gnu_cxx17__normal_iteratorIPPcSt6vectorIS1_SaIS1_EEEC1ERKS2_ [343] ----------------------------------------------- 0.00 0.00 1738/8290 ._Z22GetNonExcludedResiduesP10CAtomArrayR7StrList [27] 0.00 0.00 6552/8290 ._ZN7StrList13destroyCopiesEv [547] [391] 0.0 0.00 0.00 8290 ._ZN9__gnu_cxxneIPPcSt6vectorIS1_SaIS1_EEEEbRKNS_17__normal_iteratorIT_T0_EESB_ [391] 0.00 0.00 16580/16730 ._ZNK9__gnu_cxx17__normal_iteratorIPPcSt6vectorIS1_SaIS1_EEE4baseEv [359] ----------------------------------------------- 0.00 0.00 2/7435 ._ZN7StrList13destroyCopiesEv [547] 0.00 0.00 15/7435 ._ZNSt6vectorIPcSaIS0_EE13_M_insert_auxEN9__gnu_cxx17__normal_iteratorIPS0_S2_EERKS0_ [289] 0.00 0.00 869/7435 ._Z22GetNonExcludedResiduesP10CAtomArrayR7StrList [27] 0.00 0.00 6549/7435 ._ZNSt6vectorIPcSaIS0_EEixEm [421] [392] 0.0 0.00 0.00 7435 ._ZNSt6vectorIPcSaIS0_EE5beginEv [392] 0.00 0.00 7435/29798 ._ZN9__gnu_cxx17__normal_iteratorIPPcSt6vectorIS1_SaIS1_EEEC1ERKS2_ [343] ----------------------------------------------- 0.00 0.00 869/7419 ._Z22GetNonExcludedResiduesP10CAtomArrayR7StrList [27] 0.00 0.00 6550/7419 ._ZN7StrList13destroyCopiesEv [547] [393] 0.0 0.00 0.00 7419 ._ZN9__gnu_cxx17__normal_iteratorIPPcSt6vectorIS1_SaIS1_EEEppEi [393] 0.00 0.00 7419/29798 ._ZN9__gnu_cxx17__normal_iteratorIPPcSt6vectorIS1_SaIS1_EEEC1ERKS2_ [343] ----------------------------------------------- 0.00 0.00 7418/7418 ._Z15FindProteinFilePcPKcS1_PS1_ [68] [394] 0.0 0.00 0.00 7418 ._Z8StrLowerPc [394] ----------------------------------------------- 0.00 0.00 20/6572 ._ZNKSt6vectorIPcSaIS0_EE4sizeEv [509] 0.00 0.00 6552/6572 ._ZlsRSoRK7StrList [568] [395] 0.0 0.00 0.00 6572 ._ZNKSt6vectorIPcSaIS0_EE3endEv [395] 0.00 0.00 6572/13144 ._ZN9__gnu_cxx17__normal_iteratorIPKPcSt6vectorIS1_SaIS1_EEEC1ERKS3_ [369] ----------------------------------------------- 0.00 0.00 6552/6552 ._ZlsRSoRK7StrList [568] [396] 0.0 0.00 0.00 6552 ._ZN9__gnu_cxxneIPKPcSt6vectorIS1_SaIS1_EEEEbRKNS_17__normal_iteratorIT_T0_EESC_ [396] 0.00 0.00 13104/13144 ._ZNK9__gnu_cxx17__normal_iteratorIPKPcSt6vectorIS1_SaIS1_EEE4baseEv [370] ----------------------------------------------- 0.00 0.00 6550/6550 ._ZlsRSoRK7StrList [568] [397] 0.0 0.00 0.00 6550 ._ZN9__gnu_cxx17__normal_iteratorIPKPcSt6vectorIS1_SaIS1_EEEppEi [397] 0.00 0.00 6550/13144 ._ZN9__gnu_cxx17__normal_iteratorIPKPcSt6vectorIS1_SaIS1_EEEC1ERKS3_ [369] ----------------------------------------------- 0.00 0.00 6550/6550 ._ZlsRSoRK7StrList [568] [398] 0.0 0.00 0.00 6550 ._ZNK9__gnu_cxx17__normal_iteratorIPKPcSt6vectorIS1_SaIS1_EEEdeEv [398] ----------------------------------------------- 0.00 0.00 6549/6549 ._ZN17PdbidPointListMap6lookupESsb [130] [399] 0.0 0.00 0.00 6549 ._ZN9PointListC1Ev [399] 0.00 0.00 6549/6549 ._ZNSaIP5PointEC1Ev [409] 0.00 0.00 6549/6549 ._ZNSt6vectorIP5PointSaIS1_EEC1ERKS2_ [419] 0.00 0.00 6549/6549 ._ZNSaIP5PointED1Ev [411] ----------------------------------------------- 0.00 0.00 6549/6549 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE11_M_put_nodeEPNS_15_Hashtable_nodeIS5_EE [406] [400] 0.0 0.00 0.00 6549 ._ZN9__gnu_cxx13new_allocatorINS_15_Hashtable_nodeISt4pairIKSsP9PointListEEEE10deallocateEPS7_m [400] ----------------------------------------------- 0.00 0.00 6549/6549 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE11_M_get_nodeEv [405] [401] 0.0 0.00 0.00 6549 ._ZN9__gnu_cxx13new_allocatorINS_15_Hashtable_nodeISt4pairIKSsP9PointListEEEE8allocateEmPKv [401] ----------------------------------------------- 0.00 0.00 6549/6549 ._ZNSaIP5PointEC2ERKS1_ [410] [402] 0.0 0.00 0.00 6549 ._ZN9__gnu_cxx13new_allocatorIP5PointEC2ERKS3_ [402] ----------------------------------------------- 0.00 0.00 6549/6549 ._ZNSaIP5PointEC1Ev [409] [403] 0.0 0.00 0.00 6549 ._ZN9__gnu_cxx13new_allocatorIP5PointEC2Ev [403] ----------------------------------------------- 0.00 0.00 6549/6549 ._ZN9PointListD1Ev [278] [404] 0.0 0.00 0.00 6549 ._ZN9__gnu_cxx17__normal_iteratorIPP5PointSt6vectorIS2_SaIS2_EEEC1Ev [404] ----------------------------------------------- 0.00 0.00 6549/6549 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE11_M_new_nodeERKS5_ [284] [405] 0.0 0.00 0.00 6549 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE11_M_get_nodeEv [405] 0.00 0.00 6549/6549 ._ZN9__gnu_cxx13new_allocatorINS_15_Hashtable_nodeISt4pairIKSsP9PointListEEEE8allocateEmPKv [401] ----------------------------------------------- 0.00 0.00 6549/6549 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE14_M_delete_nodeEPNS_15_Hashtable_nodeIS5_EE [407] [406] 0.0 0.00 0.00 6549 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE11_M_put_nodeEPNS_15_Hashtable_nodeIS5_EE [406] 0.00 0.00 6549/6549 ._ZN9__gnu_cxx13new_allocatorINS_15_Hashtable_nodeISt4pairIKSsP9PointListEEEE10deallocateEPS7_m [400] ----------------------------------------------- 0.00 0.00 6549/6549 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE5clearEv [190] [407] 0.0 0.00 0.00 6549 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE14_M_delete_nodeEPNS_15_Hashtable_nodeIS5_EE [407] 0.00 0.00 6549/6549 ._ZSt8_DestroyISt4pairIKSsP9PointListEEvPT_ [424] 0.00 0.00 6549/6549 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE11_M_put_nodeEPNS_15_Hashtable_nodeIS5_EE [406] ----------------------------------------------- 0.00 0.00 6549/6549 ._ZNSt6vectorIPcSaIS0_EEixEm [421] [408] 0.0 0.00 0.00 6549 ._ZNK9__gnu_cxx17__normal_iteratorIPPcSt6vectorIS1_SaIS1_EEEplERKl [408] 0.00 0.00 6549/29798 ._ZN9__gnu_cxx17__normal_iteratorIPPcSt6vectorIS1_SaIS1_EEEC1ERKS2_ [343] ----------------------------------------------- 0.00 0.00 6549/6549 ._ZN9PointListC1Ev [399] [409] 0.0 0.00 0.00 6549 ._ZNSaIP5PointEC1Ev [409] 0.00 0.00 6549/6549 ._ZN9__gnu_cxx13new_allocatorIP5PointEC2Ev [403] ----------------------------------------------- 0.00 0.00 6549/6549 ._ZNSt12_Vector_baseIP5PointSaIS1_EE12_Vector_implC1ERKS2_ [413] [410] 0.0 0.00 0.00 6549 ._ZNSaIP5PointEC2ERKS1_ [410] 0.00 0.00 6549/6549 ._ZN9__gnu_cxx13new_allocatorIP5PointEC2ERKS3_ [402] ----------------------------------------------- 0.00 0.00 6549/6549 ._ZN9PointListC1Ev [399] [411] 0.0 0.00 0.00 6549 ._ZNSaIP5PointED1Ev [411] 0.00 0.00 6549/13098 ._ZN9__gnu_cxx13new_allocatorIP5PointED2Ev [372] ----------------------------------------------- 0.00 0.00 6549/6549 ._ZNSt12_Vector_baseIP5PointSaIS1_EE12_Vector_implD1Ev [414] [412] 0.0 0.00 0.00 6549 ._ZNSaIP5PointED2Ev [412] 0.00 0.00 6549/13098 ._ZN9__gnu_cxx13new_allocatorIP5PointED2Ev [372] ----------------------------------------------- 0.00 0.00 6549/6549 ._ZNSt12_Vector_baseIP5PointSaIS1_EEC2ERKS2_ [415] [413] 0.0 0.00 0.00 6549 ._ZNSt12_Vector_baseIP5PointSaIS1_EE12_Vector_implC1ERKS2_ [413] 0.00 0.00 6549/6549 ._ZNSaIP5PointEC2ERKS1_ [410] ----------------------------------------------- 0.00 0.00 6549/6549 ._ZNSt12_Vector_baseIP5PointSaIS1_EED2Ev [416] [414] 0.0 0.00 0.00 6549 ._ZNSt12_Vector_baseIP5PointSaIS1_EE12_Vector_implD1Ev [414] 0.00 0.00 6549/6549 ._ZNSaIP5PointED2Ev [412] ----------------------------------------------- 0.00 0.00 6549/6549 ._ZNSt6vectorIP5PointSaIS1_EEC1ERKS2_ [419] [415] 0.0 0.00 0.00 6549 ._ZNSt12_Vector_baseIP5PointSaIS1_EEC2ERKS2_ [415] 0.00 0.00 6549/6549 ._ZNSt12_Vector_baseIP5PointSaIS1_EE12_Vector_implC1ERKS2_ [413] ----------------------------------------------- 0.00 0.00 6549/6549 ._ZNSt6vectorIP5PointSaIS1_EED1Ev [420] [416] 0.0 0.00 0.00 6549 ._ZNSt12_Vector_baseIP5PointSaIS1_EED2Ev [416] 0.00 0.00 6549/19138 ._ZNSt12_Vector_baseIP5PointSaIS1_EE13_M_deallocateEPS1_m [358] 0.00 0.00 6549/6549 ._ZNSt12_Vector_baseIP5PointSaIS1_EE12_Vector_implD1Ev [414] ----------------------------------------------- 0.00 0.00 6549/6549 ._ZSt10_ConstructISt4pairIKSsP9PointListES4_EvPT_RKT0_ [285] [417] 0.0 0.00 0.00 6549 ._ZNSt4pairIKSsP9PointListEC1ERKS3_ [417] ----------------------------------------------- 0.00 0.00 6549/6549 ._ZN9__gnu_cxx8hash_mapISsP9PointListNS_4hashISsEESt8equal_toISsESaIS2_EEixERKSs [152] [418] 0.0 0.00 0.00 6549 ._ZNSt4pairIKSsP9PointListEC1ERS0_RKS2_ [418] ----------------------------------------------- 0.00 0.00 6549/6549 ._ZN9PointListC1Ev [399] [419] 0.0 0.00 0.00 6549 ._ZNSt6vectorIP5PointSaIS1_EEC1ERKS2_ [419] 0.00 0.00 6549/6549 ._ZNSt12_Vector_baseIP5PointSaIS1_EEC2ERKS2_ [415] ----------------------------------------------- 0.00 0.00 6549/6549 ._ZN9PointListD1Ev [278] [420] 0.0 0.00 0.00 6549 ._ZNSt6vectorIP5PointSaIS1_EED1Ev [420] 0.00 0.00 6549/6549 ._ZSt8_DestroyIPP5PointEvT_S3_ [423] 0.00 0.00 6549/6549 ._ZNSt12_Vector_baseIP5PointSaIS1_EED2Ev [416] ----------------------------------------------- 0.00 0.00 6549/6549 ._ZN9Featurize23RunPointEnvironmentModeEv [4] [421] 0.0 0.00 0.00 6549 ._ZNSt6vectorIPcSaIS0_EEixEm [421] 0.00 0.00 6549/7435 ._ZNSt6vectorIPcSaIS0_EE5beginEv [392] 0.00 0.00 6549/13968 ._ZNK9__gnu_cxx17__normal_iteratorIPPcSt6vectorIS1_SaIS1_EEEdeEv [364] 0.00 0.00 6549/6549 ._ZNK9__gnu_cxx17__normal_iteratorIPPcSt6vectorIS1_SaIS1_EEEplERKl [408] ----------------------------------------------- 0.00 0.00 6549/6549 ._ZSt8_DestroyIPP5PointEvT_S3_ [423] [422] 0.0 0.00 0.00 6549 ._ZSt13__destroy_auxIPP5PointEvT_S3_11__true_type [422] ----------------------------------------------- 0.00 0.00 6549/6549 ._ZNSt6vectorIP5PointSaIS1_EED1Ev [420] [423] 0.0 0.00 0.00 6549 ._ZSt8_DestroyIPP5PointEvT_S3_ [423] 0.00 0.00 6549/6549 ._ZSt13__destroy_auxIPP5PointEvT_S3_11__true_type [422] ----------------------------------------------- 0.00 0.00 6549/6549 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE14_M_delete_nodeEPNS_15_Hashtable_nodeIS5_EE [407] [424] 0.0 0.00 0.00 6549 ._ZSt8_DestroyISt4pairIKSsP9PointListEEvPT_ [424] 0.00 0.00 6549/13098 ._ZNSt4pairIKSsP9PointListED1Ev [373] ----------------------------------------------- 0.00 0.00 978/5868 ._ZSt8distanceIPKmENSt15iterator_traitsIT_E15difference_typeES3_S3_ [441] 0.00 0.00 4890/5868 ._ZSt7advanceIPKmlEvRT_T0_ [428] [425] 0.0 0.00 0.00 5868 ._ZSt19__iterator_categoryIPKmENSt15iterator_traitsIT_E17iterator_categoryERKS3_ [425] ----------------------------------------------- 0.00 0.00 5680/5680 ._ZN9Featurize23RunPointEnvironmentModeEv [4] [426] 0.0 0.00 0.00 5680 ._Z7warningPcz [426] ----------------------------------------------- 0.00 0.00 1738/5214 ._ZN9__gnu_cxxmiIPPNS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESC_St6vectorISB_SaISB_EEEENS_17__normal_iteratorIT_T1_E15difference_typeERKSJ_RKNSG_IT0_SI_EE [469] 0.00 0.00 1738/5214 ._ZN9__gnu_cxxneIPPNS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESt6vectorISB_SaISB_EEEEbRKNS_17__normal_iteratorIT_T0_EESL_ [470] 0.00 0.00 1738/5214 ._ZSt10__copy_ni1IN9__gnu_cxx17__normal_iteratorIPPNS0_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESt6vectorISC_SaISC_EEEESD_ET0_T_SJ_SI_11__true_type [235] [427] 0.0 0.00 0.00 5214 ._ZNK9__gnu_cxx17__normal_iteratorIPPNS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESt6vectorISB_SaISB_EEE4baseEv [427] ----------------------------------------------- 0.00 0.00 4890/4890 ._ZSt11lower_boundIPKmmET_S2_S2_RKT0_ [440] [428] 0.0 0.00 0.00 4890 ._ZSt7advanceIPKmlEvRT_T0_ [428] 0.00 0.00 4890/5868 ._ZSt19__iterator_categoryIPKmENSt15iterator_traitsIT_E17iterator_categoryERKS3_ [425] 0.00 0.00 4890/4890 ._ZSt9__advanceIPKmlEvRT_T0_St26random_access_iterator_tag [429] ----------------------------------------------- 0.00 0.00 4890/4890 ._ZSt7advanceIPKmlEvRT_T0_ [428] [429] 0.0 0.00 0.00 4890 ._ZSt9__advanceIPKmlEvRT_T0_St26random_access_iterator_tag [429] ----------------------------------------------- 0.00 0.00 971/1942 ._ZNSaIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEED1Ev [446] 0.00 0.00 971/1942 ._ZNSaIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEED2Ev [447] [430] 0.0 0.00 0.00 1942 ._ZN9__gnu_cxx13new_allocatorIPNS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEED2Ev [430] ----------------------------------------------- 0.00 0.00 869/1840 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE7reserveEm [128] 0.00 0.00 971/1840 ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EED2Ev [451] [431] 0.0 0.00 0.00 1840 ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE13_M_deallocateEPSB_m [431] 0.00 0.00 971/971 ._ZN9__gnu_cxx13new_allocatorIPNS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEE10deallocateEPSB_m [442] ----------------------------------------------- 0.00 0.00 1774/1774 ._ZN9Featurize23RunPointEnvironmentModeEv [4] [432] 0.0 0.00 0.00 1774 ._ZN5Point5PrintEP8_IO_FILE [432] ----------------------------------------------- 0.00 0.00 1774/1774 ._ZN9Featurize23RunPointEnvironmentModeEv [4] [433] 0.0 0.00 0.00 1774 ._ZN9PointList8GetPointEi [433] 0.00 0.00 1774/1774 ._ZNSt6vectorIP5PointSaIS1_EEixEm [435] ----------------------------------------------- 0.00 0.00 1774/1774 ._ZNSt6vectorIP5PointSaIS1_EEixEm [435] [434] 0.0 0.00 0.00 1774 ._ZNK9__gnu_cxx17__normal_iteratorIPP5PointSt6vectorIS2_SaIS2_EEEplERKl [434] 0.00 0.00 1774/145374 ._ZN9__gnu_cxx17__normal_iteratorIPP5PointSt6vectorIS2_SaIS2_EEEC1ERKS3_ [313] ----------------------------------------------- 0.00 0.00 1774/1774 ._ZN9PointList8GetPointEi [433] [435] 0.0 0.00 0.00 1774 ._ZNSt6vectorIP5PointSaIS1_EEixEm [435] 0.00 0.00 1774/20912 ._ZNSt6vectorIP5PointSaIS1_EE5beginEv [353] 0.00 0.00 1774/1774 ._ZNK9__gnu_cxx17__normal_iteratorIPP5PointSt6vectorIS2_SaIS2_EEEplERKl [434] 0.00 0.00 1774/15782 ._ZNK9__gnu_cxx17__normal_iteratorIPP5PointSt6vectorIS2_SaIS2_EEEdeEv [360] ----------------------------------------------- 0.00 0.00 869/1738 ._ZNSaIP8SPoint3DED1Ev [478] 0.00 0.00 869/1738 ._ZNSaIP8SPoint3DED2Ev [479] [436] 0.0 0.00 0.00 1738 ._ZN9__gnu_cxx13new_allocatorIP8SPoint3DED2Ev [436] ----------------------------------------------- 0.00 0.00 102/1073 ._ZNSaIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEEC1ERKSB_ [496] 0.00 0.00 971/1073 ._ZNSaIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEEC2ERKSB_ [445] [437] 0.0 0.00 0.00 1073 ._ZN9__gnu_cxx13new_allocatorIPNS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEEC2ERKSC_ [437] ----------------------------------------------- 0.00 0.00 7/978 ._ZNK9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE12_M_next_sizeEm [525] 0.00 0.00 971/978 ._ZNK9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE12_M_next_sizeEm [444] [438] 0.0 0.00 0.00 978 ._ZN9__gnu_cxx16__stl_next_primeEm [438] 0.00 0.00 978/978 ._ZSt11lower_boundIPKmmET_S2_S2_RKT0_ [440] ----------------------------------------------- 0.00 0.00 978/978 ._ZSt8distanceIPKmENSt15iterator_traitsIT_E15difference_typeES3_S3_ [441] [439] 0.0 0.00 0.00 978 ._ZSt10__distanceIPKmENSt15iterator_traitsIT_E15difference_typeES3_S3_St26random_access_iterator_tag [439] ----------------------------------------------- 0.00 0.00 978/978 ._ZN9__gnu_cxx16__stl_next_primeEm [438] [440] 0.0 0.00 0.00 978 ._ZSt11lower_boundIPKmmET_S2_S2_RKT0_ [440] 0.00 0.00 4890/4890 ._ZSt7advanceIPKmlEvRT_T0_ [428] 0.00 0.00 978/978 ._ZSt8distanceIPKmENSt15iterator_traitsIT_E15difference_typeES3_S3_ [441] ----------------------------------------------- 0.00 0.00 978/978 ._ZSt11lower_boundIPKmmET_S2_S2_RKT0_ [440] [441] 0.0 0.00 0.00 978 ._ZSt8distanceIPKmENSt15iterator_traitsIT_E15difference_typeES3_S3_ [441] 0.00 0.00 978/5868 ._ZSt19__iterator_categoryIPKmENSt15iterator_traitsIT_E17iterator_categoryERKS3_ [425] 0.00 0.00 978/978 ._ZSt10__distanceIPKmENSt15iterator_traitsIT_E15difference_typeES3_S3_St26random_access_iterator_tag [439] ----------------------------------------------- 0.00 0.00 971/971 ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE13_M_deallocateEPSB_m [431] [442] 0.0 0.00 0.00 971 ._ZN9__gnu_cxx13new_allocatorIPNS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEE10deallocateEPSB_m [442] ----------------------------------------------- 0.00 0.00 971/971 ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE11_M_allocateEm [448] [443] 0.0 0.00 0.00 971 ._ZN9__gnu_cxx13new_allocatorIPNS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEE8allocateEmPKv [443] ----------------------------------------------- 0.00 0.00 102/971 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE6resizeEm [43] 0.00 0.00 869/971 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE21_M_initialize_bucketsEm [121] [444] 0.0 0.00 0.00 971 ._ZNK9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE12_M_next_sizeEm [444] 0.00 0.00 971/978 ._ZN9__gnu_cxx16__stl_next_primeEm [438] ----------------------------------------------- 0.00 0.00 971/971 ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE12_Vector_implC1ERKSC_ [449] [445] 0.0 0.00 0.00 971 ._ZNSaIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEEC2ERKSB_ [445] 0.00 0.00 971/1073 ._ZN9__gnu_cxx13new_allocatorIPNS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEEC2ERKSC_ [437] ----------------------------------------------- 0.00 0.00 102/971 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE6resizeEm [43] 0.00 0.00 869/971 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EEC1EmRKS9_RKSC_RKSD_ [122] [446] 0.0 0.00 0.00 971 ._ZNSaIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEED1Ev [446] 0.00 0.00 971/1942 ._ZN9__gnu_cxx13new_allocatorIPNS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEED2Ev [430] ----------------------------------------------- 0.00 0.00 971/971 ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE12_Vector_implD1Ev [450] [447] 0.0 0.00 0.00 971 ._ZNSaIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEED2Ev [447] 0.00 0.00 971/1942 ._ZN9__gnu_cxx13new_allocatorIPNS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEED2Ev [430] ----------------------------------------------- 0.00 0.00 102/971 ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EEC2EmRKSC_ [497] 0.00 0.00 869/971 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE20_M_allocate_and_copyIPSB_EESF_mT_SG_ [177] [448] 0.0 0.00 0.00 971 ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE11_M_allocateEm [448] 0.00 0.00 971/971 ._ZN9__gnu_cxx13new_allocatorIPNS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEE8allocateEmPKv [443] ----------------------------------------------- 0.00 0.00 102/971 ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EEC2EmRKSC_ [497] 0.00 0.00 869/971 ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EEC2ERKSC_ [485] [449] 0.0 0.00 0.00 971 ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE12_Vector_implC1ERKSC_ [449] 0.00 0.00 971/971 ._ZNSaIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEEC2ERKSB_ [445] ----------------------------------------------- 0.00 0.00 971/971 ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EED2Ev [451] [450] 0.0 0.00 0.00 971 ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE12_Vector_implD1Ev [450] 0.00 0.00 971/971 ._ZNSaIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEED2Ev [447] ----------------------------------------------- 0.00 0.00 971/971 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EED1Ev [146] [451] 0.0 0.00 0.00 971 ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EED2Ev [451] 0.00 0.00 971/1840 ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE13_M_deallocateEPSB_m [431] 0.00 0.00 971/971 ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE12_Vector_implD1Ev [450] ----------------------------------------------- 0.00 0.00 102/971 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EEC1EmRKSB_RKSC_ [499] 0.00 0.00 869/971 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE14_M_fill_insertENS0_17__normal_iteratorIPSB_SD_EEmRKSB_ [199] [452] 0.0 0.00 0.00 971 ._ZSt20uninitialized_fill_nIPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEmSB_ET_SD_T0_RKT1_ [452] 0.00 0.00 971/971 ._ZSt26__uninitialized_fill_n_auxIPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEmSB_ET_SD_T0_RKT1_11__true_type [453] ----------------------------------------------- 0.00 0.00 971/971 ._ZSt20uninitialized_fill_nIPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEmSB_ET_SD_T0_RKT1_ [452] [453] 0.0 0.00 0.00 971 ._ZSt26__uninitialized_fill_n_auxIPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEmSB_ET_SD_T0_RKT1_11__true_type [453] 0.00 0.00 971/971 ._ZSt6fill_nIPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEmSB_ET_SD_T0_RKT1_ [454] ----------------------------------------------- 0.00 0.00 971/971 ._ZSt26__uninitialized_fill_n_auxIPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEmSB_ET_SD_T0_RKT1_11__true_type [453] [454] 0.0 0.00 0.00 971 ._ZSt6fill_nIPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEmSB_ET_SD_T0_RKT1_ [454] ----------------------------------------------- 0.00 0.00 869/869 ._ZN8CProtein11ReadPDBFileEPKc [8] [455] 0.0 0.00 0.00 869 ._ZN11CLISPParserC1EPKc [455] 0.00 0.00 869/869 ._ZN7CParserC2EPKc [458] ----------------------------------------------- 0.00 0.00 869/869 ._ZN13CNeighborhood17GeneratePointListEP10CAtomArray [52] [456] 0.0 0.00 0.00 869 ._ZN11SuperVectorIP8SPoint3DEC1Ev [456] 0.00 0.00 869/869 ._ZNSaIP8SPoint3DEC1Ev [476] 0.00 0.00 869/869 ._ZNSt6vectorIP8SPoint3DSaIS1_EEC2ERKS2_ [486] 0.00 0.00 869/869 ._ZNSaIP8SPoint3DED1Ev [478] ----------------------------------------------- 0.00 0.00 869/869 ._ZN13CNeighborhoodD1Ev [44] [457] 0.0 0.00 0.00 869 ._ZN11SuperVectorIP8SPoint3DED1Ev [457] 0.00 0.00 869/869 ._ZNSt6vectorIP8SPoint3DSaIS1_EED2Ev [487] ----------------------------------------------- 0.00 0.00 869/869 ._ZN11CLISPParserC1EPKc [455] [458] 0.0 0.00 0.00 869 ._ZN7CParserC2EPKc [458] ----------------------------------------------- 0.00 0.00 869/869 ._ZN11CLISPParserD1Ev [260] [459] 0.0 0.00 0.00 869 ._ZN7CParserD2Ev [459] ----------------------------------------------- 0.00 0.00 869/869 ._ZN9Featurize23RunPointEnvironmentModeEv [4] [460] 0.0 0.00 0.00 869 ._ZN9PointList9NumPointsEv [460] 0.00 0.00 869/13458 ._ZNKSt6vectorIP5PointSaIS1_EE4sizeEv [367] ----------------------------------------------- 0.00 0.00 869/869 ._ZNSaIN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEEC1IS7_EERKSaIT_E [472] [461] 0.0 0.00 0.00 869 ._ZN9__gnu_cxx13new_allocatorINS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEEC2Ev [461] ----------------------------------------------- 0.00 0.00 869/869 ._ZNSaIN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEED1Ev [473] [462] 0.0 0.00 0.00 869 ._ZN9__gnu_cxx13new_allocatorINS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEED2Ev [462] ----------------------------------------------- 0.00 0.00 869/869 ._ZNSaIP11SuperVectorIiEEC1Ev [474] [463] 0.0 0.00 0.00 869 ._ZN9__gnu_cxx13new_allocatorIP11SuperVectorIiEEC2Ev [463] ----------------------------------------------- 0.00 0.00 869/869 ._ZNSaIP11SuperVectorIiEED1Ev [475] [464] 0.0 0.00 0.00 869 ._ZN9__gnu_cxx13new_allocatorIP11SuperVectorIiEED2Ev [464] ----------------------------------------------- 0.00 0.00 869/869 ._ZNSaIP8SPoint3DEC2ERKS1_ [477] [465] 0.0 0.00 0.00 869 ._ZN9__gnu_cxx13new_allocatorIP8SPoint3DEC2ERKS3_ [465] ----------------------------------------------- 0.00 0.00 869/869 ._ZNSaIP8SPoint3DEC1Ev [476] [466] 0.0 0.00 0.00 869 ._ZN9__gnu_cxx13new_allocatorIP8SPoint3DEC2Ev [466] ----------------------------------------------- 0.00 0.00 869/869 ._ZNSaIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEEC1IS7_EERKSaIT_E [480] [467] 0.0 0.00 0.00 869 ._ZN9__gnu_cxx13new_allocatorIPNS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEEC2Ev [467] ----------------------------------------------- 0.00 0.00 869/869 ._Z22GetNonExcludedResiduesP10CAtomArrayR7StrList [27] [468] 0.0 0.00 0.00 869 ._ZN9__gnu_cxx17__normal_iteratorIPPcSt6vectorIS1_SaIS1_EEEC1Ev [468] ----------------------------------------------- 0.00 0.00 869/869 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE14_M_fill_insertENS0_17__normal_iteratorIPSB_SD_EEmRKSB_ [199] [469] 0.0 0.00 0.00 869 ._ZN9__gnu_cxxmiIPPNS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESC_St6vectorISB_SaISB_EEEENS_17__normal_iteratorIT_T1_E15difference_typeERKSJ_RKNSG_IT0_SI_EE [469] 0.00 0.00 1738/5214 ._ZNK9__gnu_cxx17__normal_iteratorIPPNS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESt6vectorISB_SaISB_EEE4baseEv [427] ----------------------------------------------- 0.00 0.00 869/869 ._ZSt4fillIN9__gnu_cxx17__normal_iteratorIPPNS0_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESt6vectorISC_SaISC_EEEESC_EvT_SI_RKT0_ [490] [470] 0.0 0.00 0.00 869 ._ZN9__gnu_cxxneIPPNS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESt6vectorISB_SaISB_EEEEbRKNS_17__normal_iteratorIT_T0_EESL_ [470] 0.00 0.00 1738/5214 ._ZNK9__gnu_cxx17__normal_iteratorIPPNS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESt6vectorISB_SaISB_EEE4baseEv [427] ----------------------------------------------- 0.00 0.00 869/869 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE7reserveEm [128] [471] 0.0 0.00 0.00 869 ._ZNKSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE8max_sizeEv [471] ----------------------------------------------- 0.00 0.00 869/869 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EEC1EmRKS9_RKSC_RKSD_ [122] [472] 0.0 0.00 0.00 869 ._ZNSaIN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEEC1IS7_EERKSaIT_E [472] 0.00 0.00 869/869 ._ZN9__gnu_cxx13new_allocatorINS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEEC2Ev [461] ----------------------------------------------- 0.00 0.00 869/869 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EED1Ev [77] [473] 0.0 0.00 0.00 869 ._ZNSaIN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEED1Ev [473] 0.00 0.00 869/869 ._ZN9__gnu_cxx13new_allocatorINS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEED2Ev [462] ----------------------------------------------- 0.00 0.00 869/869 ._ZN9__gnu_cxx8hash_mapIN8Neighbor4CellEP11SuperVectorIiENS2_4HashENS2_5EqualESaIS5_EEC2Ev [120] [474] 0.0 0.00 0.00 869 ._ZNSaIP11SuperVectorIiEEC1Ev [474] 0.00 0.00 869/869 ._ZN9__gnu_cxx13new_allocatorIP11SuperVectorIiEEC2Ev [463] ----------------------------------------------- 0.00 0.00 869/869 ._ZN9__gnu_cxx8hash_mapIN8Neighbor4CellEP11SuperVectorIiENS2_4HashENS2_5EqualESaIS5_EEC2Ev [120] [475] 0.0 0.00 0.00 869 ._ZNSaIP11SuperVectorIiEED1Ev [475] 0.00 0.00 869/869 ._ZN9__gnu_cxx13new_allocatorIP11SuperVectorIiEED2Ev [464] ----------------------------------------------- 0.00 0.00 869/869 ._ZN11SuperVectorIP8SPoint3DEC1Ev [456] [476] 0.0 0.00 0.00 869 ._ZNSaIP8SPoint3DEC1Ev [476] 0.00 0.00 869/869 ._ZN9__gnu_cxx13new_allocatorIP8SPoint3DEC2Ev [466] ----------------------------------------------- 0.00 0.00 869/869 ._ZNSt12_Vector_baseIP8SPoint3DSaIS1_EE12_Vector_implC1ERKS2_ [481] [477] 0.0 0.00 0.00 869 ._ZNSaIP8SPoint3DEC2ERKS1_ [477] 0.00 0.00 869/869 ._ZN9__gnu_cxx13new_allocatorIP8SPoint3DEC2ERKS3_ [465] ----------------------------------------------- 0.00 0.00 869/869 ._ZN11SuperVectorIP8SPoint3DEC1Ev [456] [478] 0.0 0.00 0.00 869 ._ZNSaIP8SPoint3DED1Ev [478] 0.00 0.00 869/1738 ._ZN9__gnu_cxx13new_allocatorIP8SPoint3DED2Ev [436] ----------------------------------------------- 0.00 0.00 869/869 ._ZNSt12_Vector_baseIP8SPoint3DSaIS1_EE12_Vector_implD1Ev [482] [479] 0.0 0.00 0.00 869 ._ZNSaIP8SPoint3DED2Ev [479] 0.00 0.00 869/1738 ._ZN9__gnu_cxx13new_allocatorIP8SPoint3DED2Ev [436] ----------------------------------------------- 0.00 0.00 869/869 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EEC1EmRKS9_RKSC_RKSD_ [122] [480] 0.0 0.00 0.00 869 ._ZNSaIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEEC1IS7_EERKSaIT_E [480] 0.00 0.00 869/869 ._ZN9__gnu_cxx13new_allocatorIPNS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEEC2Ev [467] ----------------------------------------------- 0.00 0.00 869/869 ._ZNSt12_Vector_baseIP8SPoint3DSaIS1_EEC2ERKS2_ [483] [481] 0.0 0.00 0.00 869 ._ZNSt12_Vector_baseIP8SPoint3DSaIS1_EE12_Vector_implC1ERKS2_ [481] 0.00 0.00 869/869 ._ZNSaIP8SPoint3DEC2ERKS1_ [477] ----------------------------------------------- 0.00 0.00 869/869 ._ZNSt12_Vector_baseIP8SPoint3DSaIS1_EED2Ev [484] [482] 0.0 0.00 0.00 869 ._ZNSt12_Vector_baseIP8SPoint3DSaIS1_EE12_Vector_implD1Ev [482] 0.00 0.00 869/869 ._ZNSaIP8SPoint3DED2Ev [479] ----------------------------------------------- 0.00 0.00 869/869 ._ZNSt6vectorIP8SPoint3DSaIS1_EEC2ERKS2_ [486] [483] 0.0 0.00 0.00 869 ._ZNSt12_Vector_baseIP8SPoint3DSaIS1_EEC2ERKS2_ [483] 0.00 0.00 869/869 ._ZNSt12_Vector_baseIP8SPoint3DSaIS1_EE12_Vector_implC1ERKS2_ [481] ----------------------------------------------- 0.00 0.00 869/869 ._ZNSt6vectorIP8SPoint3DSaIS1_EED2Ev [487] [484] 0.0 0.00 0.00 869 ._ZNSt12_Vector_baseIP8SPoint3DSaIS1_EED2Ev [484] 0.00 0.00 869/11215 ._ZNSt12_Vector_baseIP8SPoint3DSaIS1_EE13_M_deallocateEPS1_m [380] 0.00 0.00 869/869 ._ZNSt12_Vector_baseIP8SPoint3DSaIS1_EE12_Vector_implD1Ev [482] ----------------------------------------------- 0.00 0.00 869/869 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EEC1ERKSC_ [488] [485] 0.0 0.00 0.00 869 ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EEC2ERKSC_ [485] 0.00 0.00 869/971 ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE12_Vector_implC1ERKSC_ [449] ----------------------------------------------- 0.00 0.00 869/869 ._ZN11SuperVectorIP8SPoint3DEC1Ev [456] [486] 0.0 0.00 0.00 869 ._ZNSt6vectorIP8SPoint3DSaIS1_EEC2ERKS2_ [486] 0.00 0.00 869/869 ._ZNSt12_Vector_baseIP8SPoint3DSaIS1_EEC2ERKS2_ [483] ----------------------------------------------- 0.00 0.00 869/869 ._ZN11SuperVectorIP8SPoint3DED1Ev [457] [487] 0.0 0.00 0.00 869 ._ZNSt6vectorIP8SPoint3DSaIS1_EED2Ev [487] 0.00 0.00 869/869 ._ZSt8_DestroyIPP8SPoint3DEvT_S3_ [491] 0.00 0.00 869/869 ._ZNSt12_Vector_baseIP8SPoint3DSaIS1_EED2Ev [484] ----------------------------------------------- 0.00 0.00 869/869 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EEC1EmRKS9_RKSC_RKSD_ [122] [488] 0.0 0.00 0.00 869 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EEC1ERKSC_ [488] 0.00 0.00 869/869 ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EEC2ERKSC_ [485] ----------------------------------------------- 0.00 0.00 869/869 ._ZSt8_DestroyIPP8SPoint3DEvT_S3_ [491] [489] 0.0 0.00 0.00 869 ._ZSt13__destroy_auxIPP8SPoint3DEvT_S3_11__true_type [489] ----------------------------------------------- 0.00 0.00 869/869 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE14_M_fill_insertENS0_17__normal_iteratorIPSB_SD_EEmRKSB_ [199] [490] 0.0 0.00 0.00 869 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._ZSt4swapIPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEEvRT_SE_ [493] ----------------------------------------------- 0.00 0.00 85/243 ._ZN5SAtom17GetHydrophobicityEv [49] 0.00 0.00 158/243 ._ZN5SAtom12GetVDWRadiusEv [75] [494] 0.0 0.00 0.00 243 ._Z9IsVerbosev [494] ----------------------------------------------- 0.00 0.00 102/102 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE6resizeEm [43] [495] 0.0 0.00 0.00 102 ._ZNKSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE13get_allocatorEv [495] 0.00 0.00 102/102 ._ZNSaIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEEC1ERKSB_ [496] ----------------------------------------------- 0.00 0.00 102/102 ._ZNKSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE13get_allocatorEv [495] [496] 0.0 0.00 0.00 102 ._ZNSaIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEEC1ERKSB_ [496] 0.00 0.00 102/1073 ._ZN9__gnu_cxx13new_allocatorIPNS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEEC2ERKSC_ [437] ----------------------------------------------- 0.00 0.00 102/102 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EEC1EmRKSB_RKSC_ [499] [497] 0.0 0.00 0.00 102 ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EEC2EmRKSC_ [497] 0.00 0.00 102/971 ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE12_Vector_implC1ERKSC_ [449] 0.00 0.00 102/971 ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE11_M_allocateEm [448] ----------------------------------------------- 0.00 0.00 102/102 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE6resizeEm [43] [498] 0.0 0.00 0.00 102 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE4swapERSD_ [498] 0.00 0.00 306/306 ._ZSt4swapIPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEEvRT_SE_ [493] ----------------------------------------------- 0.00 0.00 102/102 ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE6resizeEm [43] [499] 0.0 0.00 0.00 102 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EEC1EmRKSB_RKSC_ [499] 0.00 0.00 102/102 ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EEC2EmRKSC_ [497] 0.00 0.00 102/971 ._ZSt20uninitialized_fill_nIPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEEmSB_ET_SD_T0_RKT1_ [452] ----------------------------------------------- 0.00 0.00 30/30 ._ZSt4copyIN9__gnu_cxx17__normal_iteratorIPPcSt6vectorIS2_SaIS2_EEEES7_ET0_T_S9_S8_ [506] [500] 0.0 0.00 0.00 30 ._ZSt10__copy_ni1IN9__gnu_cxx17__normal_iteratorIPPcSt6vectorIS2_SaIS2_EEEES7_ET0_T_S9_S8_11__true_type [500] 0.00 0.00 60/16730 ._ZNK9__gnu_cxx17__normal_iteratorIPPcSt6vectorIS1_SaIS1_EEE4baseEv [359] 0.00 0.00 30/30 ._ZSt10__copy_ni2IPPcN9__gnu_cxx17__normal_iteratorIS1_St6vectorIS0_SaIS0_EEEEET0_T_S9_S8_11__true_type [501] ----------------------------------------------- 0.00 0.00 30/30 ._ZSt10__copy_ni1IN9__gnu_cxx17__normal_iteratorIPPcSt6vectorIS2_SaIS2_EEEES7_ET0_T_S9_S8_11__true_type [500] [501] 0.0 0.00 0.00 30 ._ZSt10__copy_ni2IPPcN9__gnu_cxx17__normal_iteratorIS1_St6vectorIS0_SaIS0_EEEEET0_T_S9_S8_11__true_type [501] 0.00 0.00 30/16730 ._ZNK9__gnu_cxx17__normal_iteratorIPPcSt6vectorIS1_SaIS1_EEE4baseEv [359] 0.00 0.00 30/30 ._ZSt11__copy_aux2IPcEPT_S2_S2_S2_11__true_type [502] 0.00 0.00 30/29798 ._ZN9__gnu_cxx17__normal_iteratorIPPcSt6vectorIS1_SaIS1_EEEC1ERKS2_ [343] ----------------------------------------------- 0.00 0.00 30/30 ._ZSt10__copy_ni2IPPcN9__gnu_cxx17__normal_iteratorIS1_St6vectorIS0_SaIS0_EEEEET0_T_S9_S8_11__true_type [501] [502] 0.0 0.00 0.00 30 ._ZSt11__copy_aux2IPcEPT_S2_S2_S2_11__true_type [502] 0.00 0.00 30/30 ._ZSt14__copy_trivialIPcEPT_PKS1_S4_S2_ [503] ----------------------------------------------- 0.00 0.00 30/30 ._ZSt11__copy_aux2IPcEPT_S2_S2_S2_11__true_type [502] [503] 0.0 0.00 0.00 30 ._ZSt14__copy_trivialIPcEPT_PKS1_S4_S2_ [503] ----------------------------------------------- 0.00 0.00 30/30 ._ZNSt6vectorIPcSaIS0_EE13_M_insert_auxEN9__gnu_cxx17__normal_iteratorIPS0_S2_EERKS0_ [289] [504] 0.0 0.00 0.00 30 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._ZSt10__copy_ni1IN9__gnu_cxx17__normal_iteratorIPPcSt6vectorIS2_SaIS2_EEEES7_ET0_T_S9_S8_11__true_type [500] ----------------------------------------------- 0.00 0.00 2/22 ._ZlsRSoRK7StrList [568] 0.00 0.00 20/22 ._ZNKSt6vectorIPcSaIS0_EE4sizeEv [509] [507] 0.0 0.00 0.00 22 ._ZNKSt6vectorIPcSaIS0_EE5beginEv [507] 0.00 0.00 22/13144 ._ZN9__gnu_cxx17__normal_iteratorIPKPcSt6vectorIS1_SaIS1_EEEC1ERKS3_ [369] ----------------------------------------------- 0.00 0.00 20/20 ._ZNKSt6vectorIPcSaIS0_EE4sizeEv [509] [508] 0.0 0.00 0.00 20 ._ZN9__gnu_cxxmiIPKPcS3_St6vectorIS1_SaIS1_EEEENS_17__normal_iteratorIT_T1_E15difference_typeERKSA_RKNS7_IT0_S9_EE [508] 0.00 0.00 40/13144 ._ZNK9__gnu_cxx17__normal_iteratorIPKPcSt6vectorIS1_SaIS1_EEE4baseEv [370] ----------------------------------------------- 0.00 0.00 1/20 ._ZN9Featurize23RunPointEnvironmentModeEv [4] 0.00 0.00 2/20 ._ZN9Featurize14DumpParametersEi [576] 0.00 0.00 2/20 ._ZN9Featurize14ParseArgumentsEiPPc [87] 0.00 0.00 15/20 ._ZNSt6vectorIPcSaIS0_EE13_M_insert_auxEN9__gnu_cxx17__normal_iteratorIPS0_S2_EERKS0_ [289] [509] 0.0 0.00 0.00 20 ._ZNKSt6vectorIPcSaIS0_EE4sizeEv [509] 0.00 0.00 20/6572 ._ZNKSt6vectorIPcSaIS0_EE3endEv [395] 0.00 0.00 20/22 ._ZNKSt6vectorIPcSaIS0_EE5beginEv [507] 0.00 0.00 20/20 ._ZN9__gnu_cxxmiIPKPcS3_St6vectorIS1_SaIS1_EEEENS_17__normal_iteratorIT_T1_E15difference_typeERKSA_RKNS7_IT0_S9_EE [508] ----------------------------------------------- 0.00 0.00 18/18 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE4swapERSA_ [541] [510] 0.0 0.00 0.00 18 ._ZSt4swapIPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEEEvRT_SB_ [510] ----------------------------------------------- 0.00 0.00 2/17 ._ZNSt12_Vector_baseIPcSaIS0_EED2Ev [559] 0.00 0.00 15/17 ._ZNSt6vectorIPcSaIS0_EE13_M_insert_auxEN9__gnu_cxx17__normal_iteratorIPS0_S2_EERKS0_ [289] [511] 0.0 0.00 0.00 17 ._ZNSt12_Vector_baseIPcSaIS0_EE13_M_deallocateEPS0_m [511] 0.00 0.00 15/15 ._ZN9__gnu_cxx13new_allocatorIPcE10deallocateEPS1_m [512] ----------------------------------------------- 0.00 0.00 15/15 ._ZNSt12_Vector_baseIPcSaIS0_EE13_M_deallocateEPS0_m [511] [512] 0.0 0.00 0.00 15 ._ZN9__gnu_cxx13new_allocatorIPcE10deallocateEPS1_m [512] ----------------------------------------------- 0.00 0.00 15/15 ._ZNSt12_Vector_baseIPcSaIS0_EE11_M_allocateEm [515] [513] 0.0 0.00 0.00 15 ._ZN9__gnu_cxx13new_allocatorIPcE8allocateEmPKv [513] ----------------------------------------------- 0.00 0.00 15/15 ._ZNSt6vectorIPcSaIS0_EE13_M_insert_auxEN9__gnu_cxx17__normal_iteratorIPS0_S2_EERKS0_ [289] [514] 0.0 0.00 0.00 15 ._ZN9__gnu_cxx17__normal_iteratorIPPcSt6vectorIS1_SaIS1_EEEppEv [514] ----------------------------------------------- 0.00 0.00 15/15 ._ZNSt6vectorIPcSaIS0_EE13_M_insert_auxEN9__gnu_cxx17__normal_iteratorIPS0_S2_EERKS0_ [289] [515] 0.0 0.00 0.00 15 ._ZNSt12_Vector_baseIPcSaIS0_EE11_M_allocateEm [515] 0.00 0.00 15/15 ._ZN9__gnu_cxx13new_allocatorIPcE8allocateEmPKv [513] ----------------------------------------------- 0.00 0.00 15/15 ._ZSt8_DestroyIN9__gnu_cxx17__normal_iteratorIPPcSt6vectorIS2_SaIS2_EEEEEvT_S8_ [517] [516] 0.0 0.00 0.00 15 ._ZSt13__destroy_auxIN9__gnu_cxx17__normal_iteratorIPPcSt6vectorIS2_SaIS2_EEEEEvT_S8_11__true_type [516] ----------------------------------------------- 0.00 0.00 15/15 ._ZNSt6vectorIPcSaIS0_EE13_M_insert_auxEN9__gnu_cxx17__normal_iteratorIPS0_S2_EERKS0_ [289] [517] 0.0 0.00 0.00 15 ._ZSt8_DestroyIN9__gnu_cxx17__normal_iteratorIPPcSt6vectorIS2_SaIS2_EEEEEvT_S8_ [517] 0.00 0.00 15/15 ._ZSt13__destroy_auxIN9__gnu_cxx17__normal_iteratorIPPcSt6vectorIS2_SaIS2_EEEEEvT_S8_11__true_type [516] ----------------------------------------------- 0.00 0.00 7/14 ._ZNSaIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEEED1Ev [527] 0.00 0.00 7/14 ._ZNSaIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEEED2Ev [528] [518] 0.0 0.00 0.00 14 ._ZN9__gnu_cxx13new_allocatorIPNS_15_Hashtable_nodeISt4pairIKSsP9PointListEEEED2Ev [518] ----------------------------------------------- 0.00 0.00 6/13 ._ZNSaIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEEEC1ERKS8_ [539] 0.00 0.00 7/13 ._ZNSaIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEEEC2ERKS8_ [526] [519] 0.0 0.00 0.00 13 ._ZN9__gnu_cxx13new_allocatorIPNS_15_Hashtable_nodeISt4pairIKSsP9PointListEEEEC2ERKS9_ [519] ----------------------------------------------- 0.00 0.00 1/8 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE7reserveEm [296] 0.00 0.00 7/8 ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EED2Ev [532] [520] 0.0 0.00 0.00 8 ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE13_M_deallocateEPS8_m [520] 0.00 0.00 7/7 ._ZN9__gnu_cxx13new_allocatorIPNS_15_Hashtable_nodeISt4pairIKSsP9PointListEEEE10deallocateEPS8_m [523] ----------------------------------------------- 0.00 0.00 8/8 ._ZSt8_DestroyIPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEEEvT_SA_ [522] [521] 0.0 0.00 0.00 8 ._ZSt13__destroy_auxIPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEEEvT_SA_11__true_type [521] ----------------------------------------------- 0.00 0.00 1/8 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE7reserveEm [296] 0.00 0.00 7/8 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EED1Ev [533] [522] 0.0 0.00 0.00 8 ._ZSt8_DestroyIPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEEEvT_SA_ [522] 0.00 0.00 8/8 ._ZSt13__destroy_auxIPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEEEvT_SA_11__true_type [521] ----------------------------------------------- 0.00 0.00 7/7 ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE13_M_deallocateEPS8_m [520] [523] 0.0 0.00 0.00 7 ._ZN9__gnu_cxx13new_allocatorIPNS_15_Hashtable_nodeISt4pairIKSsP9PointListEEEE10deallocateEPS8_m [523] ----------------------------------------------- 0.00 0.00 7/7 ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE11_M_allocateEm [529] [524] 0.0 0.00 0.00 7 ._ZN9__gnu_cxx13new_allocatorIPNS_15_Hashtable_nodeISt4pairIKSsP9PointListEEEE8allocateEmPKv [524] ----------------------------------------------- 0.00 0.00 1/7 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE21_M_initialize_bucketsEm [294] 0.00 0.00 6/7 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE6resizeEm [182] [525] 0.0 0.00 0.00 7 ._ZNK9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE12_M_next_sizeEm [525] 0.00 0.00 7/978 ._ZN9__gnu_cxx16__stl_next_primeEm [438] ----------------------------------------------- 0.00 0.00 7/7 ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE12_Vector_implC1ERKS9_ [530] [526] 0.0 0.00 0.00 7 ._ZNSaIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEEEC2ERKS8_ [526] 0.00 0.00 7/13 ._ZN9__gnu_cxx13new_allocatorIPNS_15_Hashtable_nodeISt4pairIKSsP9PointListEEEEC2ERKS9_ [519] ----------------------------------------------- 0.00 0.00 1/7 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EEC1EmRKS7_RKSB_RKSC_ [295] 0.00 0.00 6/7 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE6resizeEm [182] [527] 0.0 0.00 0.00 7 ._ZNSaIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEEED1Ev [527] 0.00 0.00 7/14 ._ZN9__gnu_cxx13new_allocatorIPNS_15_Hashtable_nodeISt4pairIKSsP9PointListEEEED2Ev [518] ----------------------------------------------- 0.00 0.00 7/7 ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE12_Vector_implD1Ev [531] [528] 0.0 0.00 0.00 7 ._ZNSaIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEEED2Ev [528] 0.00 0.00 7/14 ._ZN9__gnu_cxx13new_allocatorIPNS_15_Hashtable_nodeISt4pairIKSsP9PointListEEEED2Ev [518] ----------------------------------------------- 0.00 0.00 1/7 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE20_M_allocate_and_copyIPS8_EESC_mT_SD_ [596] 0.00 0.00 6/7 ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EEC2EmRKS9_ [540] [529] 0.0 0.00 0.00 7 ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE11_M_allocateEm [529] 0.00 0.00 7/7 ._ZN9__gnu_cxx13new_allocatorIPNS_15_Hashtable_nodeISt4pairIKSsP9PointListEEEE8allocateEmPKv [524] ----------------------------------------------- 0.00 0.00 1/7 ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EEC2ERKS9_ [594] 0.00 0.00 6/7 ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EEC2EmRKS9_ [540] [530] 0.0 0.00 0.00 7 ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE12_Vector_implC1ERKS9_ [530] 0.00 0.00 7/7 ._ZNSaIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEEEC2ERKS8_ [526] ----------------------------------------------- 0.00 0.00 7/7 ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EED2Ev [532] [531] 0.0 0.00 0.00 7 ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE12_Vector_implD1Ev [531] 0.00 0.00 7/7 ._ZNSaIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEEED2Ev [528] ----------------------------------------------- 0.00 0.00 7/7 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EED1Ev [533] [532] 0.0 0.00 0.00 7 ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EED2Ev [532] 0.00 0.00 7/8 ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE13_M_deallocateEPS8_m [520] 0.00 0.00 7/7 ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE12_Vector_implD1Ev [531] ----------------------------------------------- 0.00 0.00 1/7 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EED1Ev [191] 0.00 0.00 6/7 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE6resizeEm [182] [533] 0.0 0.00 0.00 7 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EED1Ev [533] 0.00 0.00 7/8 ._ZSt8_DestroyIPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEEEvT_SA_ [522] 0.00 0.00 7/7 ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EED2Ev [532] ----------------------------------------------- 0.00 0.00 1/7 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE14_M_fill_insertENS0_17__normal_iteratorIPS8_SA_EEmRKS8_ [595] 0.00 0.00 6/7 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EEC1EmRKS8_RKS9_ [542] [534] 0.0 0.00 0.00 7 ._ZSt20uninitialized_fill_nIPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEEmS8_ET_SA_T0_RKT1_ [534] 0.00 0.00 7/7 ._ZSt26__uninitialized_fill_n_auxIPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEEmS8_ET_SA_T0_RKT1_11__true_type [535] ----------------------------------------------- 0.00 0.00 7/7 ._ZSt20uninitialized_fill_nIPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEEmS8_ET_SA_T0_RKT1_ [534] [535] 0.0 0.00 0.00 7 ._ZSt26__uninitialized_fill_n_auxIPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEEmS8_ET_SA_T0_RKT1_11__true_type [535] 0.00 0.00 7/7 ._ZSt6fill_nIPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEEmS8_ET_SA_T0_RKT1_ [536] ----------------------------------------------- 0.00 0.00 7/7 ._ZSt26__uninitialized_fill_n_auxIPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEEmS8_ET_SA_T0_RKT1_11__true_type [535] [536] 0.0 0.00 0.00 7 ._ZSt6fill_nIPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEEmS8_ET_SA_T0_RKT1_ [536] ----------------------------------------------- 0.00 0.00 2/6 ._ZN9__gnu_cxxmiIPPNS_15_Hashtable_nodeISt4pairIKSsP9PointListEEES9_St6vectorIS8_SaIS8_EEEENS_17__normal_iteratorIT_T1_E15difference_typeERKSG_RKNSD_IT0_SF_EE [583] 0.00 0.00 2/6 ._ZN9__gnu_cxxneIPPNS_15_Hashtable_nodeISt4pairIKSsP9PointListEEESt6vectorIS8_SaIS8_EEEEbRKNS_17__normal_iteratorIT_T0_EESI_ [584] 0.00 0.00 2/6 ._ZSt10__copy_ni1IN9__gnu_cxx17__normal_iteratorIPPNS0_15_Hashtable_nodeISt4pairIKSsP9PointListEEESt6vectorIS9_SaIS9_EEEESA_ET0_T_SG_SF_11__true_type [599] [537] 0.0 0.00 0.00 6 ._ZNK9__gnu_cxx17__normal_iteratorIPPNS_15_Hashtable_nodeISt4pairIKSsP9PointListEEESt6vectorIS8_SaIS8_EEE4baseEv [537] ----------------------------------------------- 0.00 0.00 6/6 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE6resizeEm [182] [538] 0.0 0.00 0.00 6 ._ZNKSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE13get_allocatorEv [538] 0.00 0.00 6/6 ._ZNSaIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEEEC1ERKS8_ [539] ----------------------------------------------- 0.00 0.00 6/6 ._ZNKSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE13get_allocatorEv [538] [539] 0.0 0.00 0.00 6 ._ZNSaIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEEEC1ERKS8_ [539] 0.00 0.00 6/13 ._ZN9__gnu_cxx13new_allocatorIPNS_15_Hashtable_nodeISt4pairIKSsP9PointListEEEEC2ERKS9_ [519] ----------------------------------------------- 0.00 0.00 6/6 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EEC1EmRKS8_RKS9_ [542] [540] 0.0 0.00 0.00 6 ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EEC2EmRKS9_ [540] 0.00 0.00 6/7 ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE12_Vector_implC1ERKS9_ [530] 0.00 0.00 6/7 ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE11_M_allocateEm [529] ----------------------------------------------- 0.00 0.00 6/6 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE6resizeEm [182] [541] 0.0 0.00 0.00 6 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE4swapERSA_ [541] 0.00 0.00 18/18 ._ZSt4swapIPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEEEvRT_SB_ [510] ----------------------------------------------- 0.00 0.00 6/6 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE6resizeEm [182] [542] 0.0 0.00 0.00 6 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EEC1EmRKS8_RKS9_ [542] 0.00 0.00 6/6 ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EEC2EmRKS9_ [540] 0.00 0.00 6/7 ._ZSt20uninitialized_fill_nIPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEEmS8_ET_SA_T0_RKT1_ [534] ----------------------------------------------- 0.00 0.00 2/4 ._ZNSaIPcED1Ev [554] 0.00 0.00 2/4 ._ZNSaIPcED2Ev [555] [543] 0.0 0.00 0.00 4 ._ZN9__gnu_cxx13new_allocatorIPcED2Ev [543] ----------------------------------------------- 1 ._Z8tostringRK7StrList [544] 0.00 0.00 1/3 .atexit [1] 0.00 0.00 2/3 ._ZN9Featurize14DumpParametersEi [576] [544] 0.0 0.00 0.00 3+1 ._Z8tostringRK7StrList [544] 0.00 0.00 2/2 ._ZlsRSoRK7StrList [568] 1 ._Z8tostringRK7StrList [544] ----------------------------------------------- 0.00 0.00 2/2 ._ZN7StrListC1Ev [548] [545] 0.0 0.00 0.00 2 ._ZN11SuperVectorIPcEC2Ev [545] 0.00 0.00 2/2 ._ZNSaIPcEC1Ev [552] 0.00 0.00 2/2 ._ZNSt6vectorIPcSaIS0_EEC2ERKS1_ [561] 0.00 0.00 2/2 ._ZNSaIPcED1Ev [554] ----------------------------------------------- 0.00 0.00 2/2 ._ZN7StrListD1Ev [549] [546] 0.0 0.00 0.00 2 ._ZN11SuperVectorIPcED2Ev [546] 0.00 0.00 2/2 ._ZNSt6vectorIPcSaIS0_EED2Ev [562] ----------------------------------------------- 0.00 0.00 2/2 ._ZN9FeaturizeD1Ev [132] [547] 0.0 0.00 0.00 2 ._ZN7StrList13destroyCopiesEv [547] 0.00 0.00 6552/8320 ._ZNSt6vectorIPcSaIS0_EE3endEv [390] 0.00 0.00 6552/8290 ._ZN9__gnu_cxxneIPPcSt6vectorIS1_SaIS1_EEEEbRKNS_17__normal_iteratorIT_T0_EESB_ [391] 0.00 0.00 6550/13968 ._ZNK9__gnu_cxx17__normal_iteratorIPPcSt6vectorIS1_SaIS1_EEEdeEv [364] 0.00 0.00 6550/7419 ._ZN9__gnu_cxx17__normal_iteratorIPPcSt6vectorIS1_SaIS1_EEEppEi [393] 0.00 0.00 2/7435 ._ZNSt6vectorIPcSaIS0_EE5beginEv [392] ----------------------------------------------- 0.00 0.00 2/2 ._ZN9FeaturizeC1Ev [577] [548] 0.0 0.00 0.00 2 ._ZN7StrListC1Ev [548] 0.00 0.00 2/2 ._ZN11SuperVectorIPcEC2Ev [545] ----------------------------------------------- 0.00 0.00 2/2 ._ZN9FeaturizeD1Ev [132] [549] 0.0 0.00 0.00 2 ._ZN7StrListD1Ev [549] 0.00 0.00 2/2 ._ZN11SuperVectorIPcED2Ev [546] ----------------------------------------------- 0.00 0.00 2/2 ._ZNSaIPcEC2ERKS0_ [553] [550] 0.0 0.00 0.00 2 ._ZN9__gnu_cxx13new_allocatorIPcEC2ERKS2_ [550] ----------------------------------------------- 0.00 0.00 2/2 ._ZNSaIPcEC1Ev [552] [551] 0.0 0.00 0.00 2 ._ZN9__gnu_cxx13new_allocatorIPcEC2Ev [551] ----------------------------------------------- 0.00 0.00 2/2 ._ZN11SuperVectorIPcEC2Ev [545] [552] 0.0 0.00 0.00 2 ._ZNSaIPcEC1Ev [552] 0.00 0.00 2/2 ._ZN9__gnu_cxx13new_allocatorIPcEC2Ev [551] ----------------------------------------------- 0.00 0.00 2/2 ._ZNSt12_Vector_baseIPcSaIS0_EE12_Vector_implC1ERKS1_ [556] [553] 0.0 0.00 0.00 2 ._ZNSaIPcEC2ERKS0_ [553] 0.00 0.00 2/2 ._ZN9__gnu_cxx13new_allocatorIPcEC2ERKS2_ [550] ----------------------------------------------- 0.00 0.00 2/2 ._ZN11SuperVectorIPcEC2Ev [545] [554] 0.0 0.00 0.00 2 ._ZNSaIPcED1Ev [554] 0.00 0.00 2/4 ._ZN9__gnu_cxx13new_allocatorIPcED2Ev [543] ----------------------------------------------- 0.00 0.00 2/2 ._ZNSt12_Vector_baseIPcSaIS0_EE12_Vector_implD1Ev [557] [555] 0.0 0.00 0.00 2 ._ZNSaIPcED2Ev [555] 0.00 0.00 2/4 ._ZN9__gnu_cxx13new_allocatorIPcED2Ev [543] ----------------------------------------------- 0.00 0.00 2/2 ._ZNSt12_Vector_baseIPcSaIS0_EEC2ERKS1_ [558] [556] 0.0 0.00 0.00 2 ._ZNSt12_Vector_baseIPcSaIS0_EE12_Vector_implC1ERKS1_ [556] 0.00 0.00 2/2 ._ZNSaIPcEC2ERKS0_ [553] ----------------------------------------------- 0.00 0.00 2/2 ._ZNSt12_Vector_baseIPcSaIS0_EED2Ev [559] [557] 0.0 0.00 0.00 2 ._ZNSt12_Vector_baseIPcSaIS0_EE12_Vector_implD1Ev [557] 0.00 0.00 2/2 ._ZNSaIPcED2Ev [555] ----------------------------------------------- 0.00 0.00 2/2 ._ZNSt6vectorIPcSaIS0_EEC2ERKS1_ [561] [558] 0.0 0.00 0.00 2 ._ZNSt12_Vector_baseIPcSaIS0_EEC2ERKS1_ [558] 0.00 0.00 2/2 ._ZNSt12_Vector_baseIPcSaIS0_EE12_Vector_implC1ERKS1_ [556] ----------------------------------------------- 0.00 0.00 2/2 ._ZNSt6vectorIPcSaIS0_EED2Ev [562] [559] 0.0 0.00 0.00 2 ._ZNSt12_Vector_baseIPcSaIS0_EED2Ev [559] 0.00 0.00 2/17 ._ZNSt12_Vector_baseIPcSaIS0_EE13_M_deallocateEPS0_m [511] 0.00 0.00 2/2 ._ZNSt12_Vector_baseIPcSaIS0_EE12_Vector_implD1Ev [557] ----------------------------------------------- 0.00 0.00 1/2 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE21_M_initialize_bucketsEm [294] 0.00 0.00 1/2 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE14_M_fill_insertENS0_17__normal_iteratorIPS8_SA_EEmRKS8_ [595] [560] 0.0 0.00 0.00 2 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE3endEv [560] 0.00 0.00 2/275509 ._ZN9__gnu_cxx17__normal_iteratorIPPNS_15_Hashtable_nodeISt4pairIKSsP9PointListEEESt6vectorIS8_SaIS8_EEEC1ERKS9_ [310] ----------------------------------------------- 0.00 0.00 2/2 ._ZN11SuperVectorIPcEC2Ev [545] [561] 0.0 0.00 0.00 2 ._ZNSt6vectorIPcSaIS0_EEC2ERKS1_ [561] 0.00 0.00 2/2 ._ZNSt12_Vector_baseIPcSaIS0_EEC2ERKS1_ [558] ----------------------------------------------- 0.00 0.00 2/2 ._ZN11SuperVectorIPcED2Ev [546] [562] 0.0 0.00 0.00 2 ._ZNSt6vectorIPcSaIS0_EED2Ev [562] 0.00 0.00 2/2 ._ZSt8_DestroyIPPcEvT_S2_ [567] 0.00 0.00 2/2 ._ZNSt12_Vector_baseIPcSaIS0_EED2Ev [559] ----------------------------------------------- 0.00 0.00 1/2 ._ZSt10__copy_ni1IPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEES9_ET0_T_SB_SA_12__false_type [600] 0.00 0.00 1/2 ._ZSt10__copy_ni1IN9__gnu_cxx17__normal_iteratorIPPNS0_15_Hashtable_nodeISt4pairIKSsP9PointListEEESt6vectorIS9_SaIS9_EEEESA_ET0_T_SG_SF_11__true_type [599] [563] 0.0 0.00 0.00 2 ._ZSt10__copy_ni2IPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEES9_ET0_T_SB_SA_12__false_type [563] 0.00 0.00 2/2 ._ZSt11__copy_aux2IPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEEEPT_SA_SA_SA_11__true_type [564] ----------------------------------------------- 0.00 0.00 2/2 ._ZSt10__copy_ni2IPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEES9_ET0_T_SB_SA_12__false_type [563] [564] 0.0 0.00 0.00 2 ._ZSt11__copy_aux2IPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEEEPT_SA_SA_SA_11__true_type [564] 0.00 0.00 2/2 ._ZSt14__copy_trivialIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEEEPT_PKS9_SC_SA_ [566] ----------------------------------------------- 0.00 0.00 2/2 ._ZSt8_DestroyIPPcEvT_S2_ [567] [565] 0.0 0.00 0.00 2 ._ZSt13__destroy_auxIPPcEvT_S2_11__true_type [565] ----------------------------------------------- 0.00 0.00 2/2 ._ZSt11__copy_aux2IPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEEEPT_SA_SA_SA_11__true_type [564] [566] 0.0 0.00 0.00 2 ._ZSt14__copy_trivialIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEEEPT_PKS9_SC_SA_ [566] ----------------------------------------------- 0.00 0.00 2/2 ._ZNSt6vectorIPcSaIS0_EED2Ev [562] [567] 0.0 0.00 0.00 2 ._ZSt8_DestroyIPPcEvT_S2_ [567] 0.00 0.00 2/2 ._ZSt13__destroy_auxIPPcEvT_S2_11__true_type [565] ----------------------------------------------- 0.00 0.00 2/2 ._Z8tostringRK7StrList [544] [568] 0.0 0.00 0.00 2 ._ZlsRSoRK7StrList [568] 0.00 0.00 6552/6572 ._ZNKSt6vectorIPcSaIS0_EE3endEv [395] 0.00 0.00 6552/6552 ._ZN9__gnu_cxxneIPKPcSt6vectorIS1_SaIS1_EEEEbRKNS_17__normal_iteratorIT_T0_EESC_ [396] 0.00 0.00 6550/6550 ._ZNK9__gnu_cxx17__normal_iteratorIPKPcSt6vectorIS1_SaIS1_EEEdeEv [398] 0.00 0.00 6550/6550 ._ZN9__gnu_cxx17__normal_iteratorIPKPcSt6vectorIS1_SaIS1_EEEppEi [397] 0.00 0.00 2/22 ._ZNKSt6vectorIPcSaIS0_EE5beginEv [507] ----------------------------------------------- 1 ._Z11fatal_errorPcz [569] 0.00 0.00 1/1 .atexit [1] [569] 0.0 0.00 0.00 1+1 ._Z11fatal_errorPcz [569] 1 ._Z11fatal_errorPcz [569] ----------------------------------------------- 1 ._Z12GetCoordListP8CProtein [570] 0.00 0.00 1/1 .atexit [1] [570] 0.0 0.00 0.00 1+1 ._Z12GetCoordListP8CProtein [570] 1 ._Z12GetCoordListP8CProtein [570] ----------------------------------------------- 1 ._Z12assign_typesP8CProteinP23ForceFieldParametersSetPc [571] 0.00 0.00 1/1 .atexit [1] [571] 0.0 0.00 0.00 1+1 ._Z12assign_typesP8CProteinP23ForceFieldParametersSetPc [571] 1 ._Z12assign_typesP8CProteinP23ForceFieldParametersSetPc [571] ----------------------------------------------- 1 ._Z15DumpEnvironmentP8_IO_FILEPP16CPropertiesArrayi [572] 0.00 0.00 1/1 .atexit [1] [572] 0.0 0.00 0.00 1+1 ._Z15DumpEnvironmentP8_IO_FILEPP16CPropertiesArrayi [572] 1 ._Z15DumpEnvironmentP8_IO_FILEPP16CPropertiesArrayi [572] ----------------------------------------------- 1 ._ZN15EnvironmentList9GetValuesEii [573] 0.00 0.00 1/1 .atexit [1] [573] 0.0 0.00 0.00 1+1 ._ZN15EnvironmentList9GetValuesEii [573] 1 ._ZN15EnvironmentList9GetValuesEii [573] ----------------------------------------------- 1 ._ZN23ForceFieldParametersSetD1Ev [574] 0.00 0.00 1/1 .atexit [1] [574] 0.0 0.00 0.00 1+1 ._ZN23ForceFieldParametersSetD1Ev [574] 1 ._ZN23ForceFieldParametersSetD1Ev [574] ----------------------------------------------- 1 ._ZN8CProtein7GetNameEv [575] 0.00 0.00 1/1 .atexit [1] [575] 0.0 0.00 0.00 1+1 ._ZN8CProtein7GetNameEv [575] 1 ._ZN8CProtein7GetNameEv [575] ----------------------------------------------- 0.00 0.00 1/1 ._ZN9Featurize4mainEiPPc [3] [576] 0.0 0.00 0.00 1 ._ZN9Featurize14DumpParametersEi [576] 0.00 0.00 5/639603 ._Z5debugiPcz [304] 0.00 0.00 2/20 ._ZNKSt6vectorIPcSaIS0_EE4sizeEv [509] 0.00 0.00 2/3 ._Z8tostringRK7StrList [544] ----------------------------------------------- 0.00 0.00 1/1 .main [2] [577] 0.0 0.00 0.00 1 ._ZN9FeaturizeC1Ev [577] 0.00 0.00 2/2 ._ZN7StrListC1Ev [548] ----------------------------------------------- 0.00 0.00 1/1 ._ZNSaIN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEEEC1IS4_EERKSaIT_E [589] [578] 0.0 0.00 0.00 1 ._ZN9__gnu_cxx13new_allocatorINS_15_Hashtable_nodeISt4pairIKSsP9PointListEEEEC2Ev [578] ----------------------------------------------- 0.00 0.00 1/1 ._ZNSaIN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEEED1Ev [590] [579] 0.0 0.00 0.00 1 ._ZN9__gnu_cxx13new_allocatorINS_15_Hashtable_nodeISt4pairIKSsP9PointListEEEED2Ev [579] ----------------------------------------------- 0.00 0.00 1/1 ._ZNSaIP9PointListEC1Ev [591] [580] 0.0 0.00 0.00 1 ._ZN9__gnu_cxx13new_allocatorIP9PointListEC2Ev [580] ----------------------------------------------- 0.00 0.00 1/1 ._ZNSaIP9PointListED1Ev [592] [581] 0.0 0.00 0.00 1 ._ZN9__gnu_cxx13new_allocatorIP9PointListED2Ev [581] ----------------------------------------------- 0.00 0.00 1/1 ._ZNSaIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEEEC1IS4_EERKSaIT_E [593] [582] 0.0 0.00 0.00 1 ._ZN9__gnu_cxx13new_allocatorIPNS_15_Hashtable_nodeISt4pairIKSsP9PointListEEEEC2Ev [582] ----------------------------------------------- 0.00 0.00 1/1 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE14_M_fill_insertENS0_17__normal_iteratorIPS8_SA_EEmRKS8_ [595] [583] 0.0 0.00 0.00 1 ._ZN9__gnu_cxxmiIPPNS_15_Hashtable_nodeISt4pairIKSsP9PointListEEES9_St6vectorIS8_SaIS8_EEEENS_17__normal_iteratorIT_T1_E15difference_typeERKSG_RKNSD_IT0_SF_EE [583] 0.00 0.00 2/6 ._ZNK9__gnu_cxx17__normal_iteratorIPPNS_15_Hashtable_nodeISt4pairIKSsP9PointListEEESt6vectorIS8_SaIS8_EEE4baseEv [537] ----------------------------------------------- 0.00 0.00 1/1 ._ZSt4fillIN9__gnu_cxx17__normal_iteratorIPPNS0_15_Hashtable_nodeISt4pairIKSsP9PointListEEESt6vectorIS9_SaIS9_EEEES9_EvT_SF_RKT0_ [607] [584] 0.0 0.00 0.00 1 ._ZN9__gnu_cxxneIPPNS_15_Hashtable_nodeISt4pairIKSsP9PointListEEESt6vectorIS8_SaIS8_EEEEbRKNS_17__normal_iteratorIT_T0_EESI_ [584] 0.00 0.00 2/6 ._ZNK9__gnu_cxx17__normal_iteratorIPPNS_15_Hashtable_nodeISt4pairIKSsP9PointListEEESt6vectorIS8_SaIS8_EEE4baseEv [537] ----------------------------------------------- 0.00 0.00 1/1 ._ZN17PdbidPointListMap7GetKeysEPPPKcPi [197] [585] 0.0 0.00 0.00 1 ._ZNK9__gnu_cxx8hash_mapISsP9PointListNS_4hashISsEESt8equal_toISsESaIS2_EE4sizeEv [585] 0.00 0.00 1/1 ._ZNK9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE4sizeEv [586] ----------------------------------------------- 0.00 0.00 1/1 ._ZNK9__gnu_cxx8hash_mapISsP9PointListNS_4hashISsEESt8equal_toISsESaIS2_EE4sizeEv [585] [586] 0.0 0.00 0.00 1 ._ZNK9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE4sizeEv [586] ----------------------------------------------- 0.00 0.00 1/1 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE7reserveEm [296] [587] 0.0 0.00 0.00 1 ._ZNKSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE8capacityEv [587] 0.00 0.00 1/142666 ._ZN9__gnu_cxx17__normal_iteratorIPKPNS_15_Hashtable_nodeISt4pairIKSsP9PointListEEESt6vectorIS8_SaIS8_EEEC1ERKSA_ [314] 0.00 0.00 1/71333 ._ZNKSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE5beginEv [333] 0.00 0.00 1/71333 ._ZN9__gnu_cxxmiIPKPNS_15_Hashtable_nodeISt4pairIKSsP9PointListEEESA_St6vectorIS8_SaIS8_EEEENS_17__normal_iteratorIT_T1_E15difference_typeERKSH_RKNSE_IT0_SG_EE [332] ----------------------------------------------- 0.00 0.00 1/1 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE7reserveEm [296] [588] 0.0 0.00 0.00 1 ._ZNKSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE8max_sizeEv [588] ----------------------------------------------- 0.00 0.00 1/1 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EEC1EmRKS7_RKSB_RKSC_ [295] [589] 0.0 0.00 0.00 1 ._ZNSaIN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEEEC1IS4_EERKSaIT_E [589] 0.00 0.00 1/1 ._ZN9__gnu_cxx13new_allocatorINS_15_Hashtable_nodeISt4pairIKSsP9PointListEEEEC2Ev [578] ----------------------------------------------- 0.00 0.00 1/1 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EED1Ev [191] [590] 0.0 0.00 0.00 1 ._ZNSaIN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEEED1Ev [590] 0.00 0.00 1/1 ._ZN9__gnu_cxx13new_allocatorINS_15_Hashtable_nodeISt4pairIKSsP9PointListEEEED2Ev [579] ----------------------------------------------- 0.00 0.00 1/1 ._ZN9__gnu_cxx8hash_mapISsP9PointListNS_4hashISsEESt8equal_toISsESaIS2_EEC1Ev [293] [591] 0.0 0.00 0.00 1 ._ZNSaIP9PointListEC1Ev [591] 0.00 0.00 1/1 ._ZN9__gnu_cxx13new_allocatorIP9PointListEC2Ev [580] ----------------------------------------------- 0.00 0.00 1/1 ._ZN9__gnu_cxx8hash_mapISsP9PointListNS_4hashISsEESt8equal_toISsESaIS2_EEC1Ev [293] [592] 0.0 0.00 0.00 1 ._ZNSaIP9PointListED1Ev [592] 0.00 0.00 1/1 ._ZN9__gnu_cxx13new_allocatorIP9PointListED2Ev [581] ----------------------------------------------- 0.00 0.00 1/1 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EEC1EmRKS7_RKSB_RKSC_ [295] [593] 0.0 0.00 0.00 1 ._ZNSaIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEEEC1IS4_EERKSaIT_E [593] 0.00 0.00 1/1 ._ZN9__gnu_cxx13new_allocatorIPNS_15_Hashtable_nodeISt4pairIKSsP9PointListEEEEC2Ev [582] ----------------------------------------------- 0.00 0.00 1/1 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EEC1ERKS9_ [598] [594] 0.0 0.00 0.00 1 ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EEC2ERKS9_ [594] 0.00 0.00 1/7 ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE12_Vector_implC1ERKS9_ [530] ----------------------------------------------- 0.00 0.00 1/1 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE6insertENS0_17__normal_iteratorIPS8_SA_EEmRKS8_ [597] [595] 0.0 0.00 0.00 1 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE14_M_fill_insertENS0_17__normal_iteratorIPS8_SA_EEmRKS8_ [595] 0.00 0.00 1/2 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE3endEv [560] 0.00 0.00 1/1 ._ZN9__gnu_cxxmiIPPNS_15_Hashtable_nodeISt4pairIKSsP9PointListEEES9_St6vectorIS8_SaIS8_EEEENS_17__normal_iteratorIT_T1_E15difference_typeERKSG_RKNSD_IT0_SF_EE [583] 0.00 0.00 1/275509 ._ZN9__gnu_cxx17__normal_iteratorIPPNS_15_Hashtable_nodeISt4pairIKSsP9PointListEEESt6vectorIS8_SaIS8_EEEC1ERKS9_ [310] 0.00 0.00 1/7 ._ZSt20uninitialized_fill_nIPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEEmS8_ET_SA_T0_RKT1_ [534] 0.00 0.00 1/1 ._ZSt18uninitialized_copyIN9__gnu_cxx17__normal_iteratorIPPNS0_15_Hashtable_nodeISt4pairIKSsP9PointListEEESt6vectorIS9_SaIS9_EEEESA_ET0_T_SG_SF_ [601] 0.00 0.00 1/1 ._ZSt4fillIN9__gnu_cxx17__normal_iteratorIPPNS0_15_Hashtable_nodeISt4pairIKSsP9PointListEEESt6vectorIS9_SaIS9_EEEES9_EvT_SF_RKT0_ [607] ----------------------------------------------- 0.00 0.00 1/1 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE7reserveEm [296] [596] 0.0 0.00 0.00 1 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE20_M_allocate_and_copyIPS8_EESC_mT_SD_ [596] 0.00 0.00 1/7 ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE11_M_allocateEm [529] 0.00 0.00 1/1 ._ZSt18uninitialized_copyIPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEES9_ET0_T_SB_SA_ [602] ----------------------------------------------- 0.00 0.00 1/1 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE21_M_initialize_bucketsEm [294] [597] 0.0 0.00 0.00 1 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE6insertENS0_17__normal_iteratorIPS8_SA_EEmRKS8_ [597] 0.00 0.00 1/1 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE14_M_fill_insertENS0_17__normal_iteratorIPS8_SA_EEmRKS8_ [595] ----------------------------------------------- 0.00 0.00 1/1 ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EEC1EmRKS7_RKSB_RKSC_ [295] [598] 0.0 0.00 0.00 1 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EEC1ERKS9_ [598] 0.00 0.00 1/1 ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EEC2ERKS9_ [594] ----------------------------------------------- 0.00 0.00 1/1 ._ZSt4copyIN9__gnu_cxx17__normal_iteratorIPPNS0_15_Hashtable_nodeISt4pairIKSsP9PointListEEESt6vectorIS9_SaIS9_EEEESA_ET0_T_SG_SF_ [605] [599] 0.0 0.00 0.00 1 ._ZSt10__copy_ni1IN9__gnu_cxx17__normal_iteratorIPPNS0_15_Hashtable_nodeISt4pairIKSsP9PointListEEESt6vectorIS9_SaIS9_EEEESA_ET0_T_SG_SF_11__true_type [599] 0.00 0.00 2/6 ._ZNK9__gnu_cxx17__normal_iteratorIPPNS_15_Hashtable_nodeISt4pairIKSsP9PointListEEESt6vectorIS8_SaIS8_EEE4baseEv [537] 0.00 0.00 1/2 ._ZSt10__copy_ni2IPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEES9_ET0_T_SB_SA_12__false_type [563] ----------------------------------------------- 0.00 0.00 1/1 ._ZSt4copyIPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEES9_ET0_T_SB_SA_ [606] [600] 0.0 0.00 0.00 1 ._ZSt10__copy_ni1IPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEES9_ET0_T_SB_SA_12__false_type [600] 0.00 0.00 1/2 ._ZSt10__copy_ni2IPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEES9_ET0_T_SB_SA_12__false_type [563] ----------------------------------------------- 0.00 0.00 1/1 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE14_M_fill_insertENS0_17__normal_iteratorIPS8_SA_EEmRKS8_ [595] [601] 0.0 0.00 0.00 1 ._ZSt18uninitialized_copyIN9__gnu_cxx17__normal_iteratorIPPNS0_15_Hashtable_nodeISt4pairIKSsP9PointListEEESt6vectorIS9_SaIS9_EEEESA_ET0_T_SG_SF_ [601] 0.00 0.00 1/1 ._ZSt24__uninitialized_copy_auxIN9__gnu_cxx17__normal_iteratorIPPNS0_15_Hashtable_nodeISt4pairIKSsP9PointListEEESt6vectorIS9_SaIS9_EEEESA_ET0_T_SG_SF_11__true_type [603] ----------------------------------------------- 0.00 0.00 1/1 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE20_M_allocate_and_copyIPS8_EESC_mT_SD_ [596] [602] 0.0 0.00 0.00 1 ._ZSt18uninitialized_copyIPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEES9_ET0_T_SB_SA_ [602] 0.00 0.00 1/1 ._ZSt24__uninitialized_copy_auxIPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEES9_ET0_T_SB_SA_11__true_type [604] ----------------------------------------------- 0.00 0.00 1/1 ._ZSt18uninitialized_copyIN9__gnu_cxx17__normal_iteratorIPPNS0_15_Hashtable_nodeISt4pairIKSsP9PointListEEESt6vectorIS9_SaIS9_EEEESA_ET0_T_SG_SF_ [601] [603] 0.0 0.00 0.00 1 ._ZSt24__uninitialized_copy_auxIN9__gnu_cxx17__normal_iteratorIPPNS0_15_Hashtable_nodeISt4pairIKSsP9PointListEEESt6vectorIS9_SaIS9_EEEESA_ET0_T_SG_SF_11__true_type [603] 0.00 0.00 1/1 ._ZSt4copyIN9__gnu_cxx17__normal_iteratorIPPNS0_15_Hashtable_nodeISt4pairIKSsP9PointListEEESt6vectorIS9_SaIS9_EEEESA_ET0_T_SG_SF_ [605] ----------------------------------------------- 0.00 0.00 1/1 ._ZSt18uninitialized_copyIPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEES9_ET0_T_SB_SA_ [602] [604] 0.0 0.00 0.00 1 ._ZSt24__uninitialized_copy_auxIPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEES9_ET0_T_SB_SA_11__true_type [604] 0.00 0.00 1/1 ._ZSt4copyIPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEES9_ET0_T_SB_SA_ [606] ----------------------------------------------- 0.00 0.00 1/1 ._ZSt24__uninitialized_copy_auxIN9__gnu_cxx17__normal_iteratorIPPNS0_15_Hashtable_nodeISt4pairIKSsP9PointListEEESt6vectorIS9_SaIS9_EEEESA_ET0_T_SG_SF_11__true_type [603] [605] 0.0 0.00 0.00 1 ._ZSt4copyIN9__gnu_cxx17__normal_iteratorIPPNS0_15_Hashtable_nodeISt4pairIKSsP9PointListEEESt6vectorIS9_SaIS9_EEEESA_ET0_T_SG_SF_ [605] 0.00 0.00 1/1 ._ZSt10__copy_ni1IN9__gnu_cxx17__normal_iteratorIPPNS0_15_Hashtable_nodeISt4pairIKSsP9PointListEEESt6vectorIS9_SaIS9_EEEESA_ET0_T_SG_SF_11__true_type [599] ----------------------------------------------- 0.00 0.00 1/1 ._ZSt24__uninitialized_copy_auxIPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEES9_ET0_T_SB_SA_11__true_type [604] [606] 0.0 0.00 0.00 1 ._ZSt4copyIPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEES9_ET0_T_SB_SA_ [606] 0.00 0.00 1/1 ._ZSt10__copy_ni1IPPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEES9_ET0_T_SB_SA_12__false_type [600] ----------------------------------------------- 0.00 0.00 1/1 ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE14_M_fill_insertENS0_17__normal_iteratorIPS8_SA_EEmRKS8_ [595] [607] 0.0 0.00 0.00 1 ._ZSt4fillIN9__gnu_cxx17__normal_iteratorIPPNS0_15_Hashtable_nodeISt4pairIKSsP9PointListEEESt6vectorIS9_SaIS9_EEEES9_EvT_SF_RKT0_ [607] 0.00 0.00 1/1 ._ZN9__gnu_cxxneIPPNS_15_Hashtable_nodeISt4pairIKSsP9PointListEEESt6vectorIS8_SaIS8_EEEEbRKNS_17__normal_iteratorIT_T0_EESI_ [584] ----------------------------------------------- 1 ._ZlsRSoRK11SuperVectorIP8SPoint3DE [608] 0.00 0.00 1/1 .atexit [1] [608] 0.0 0.00 0.00 1+1 ._ZlsRSoRK11SuperVectorIP8SPoint3DE [608] 1 ._ZlsRSoRK11SuperVectorIP8SPoint3DE [608] ----------------------------------------------- 1 ._ZlsRSoRK18ResidueTemplateSet [609] 0.00 0.00 1/1 .atexit [1] [609] 0.0 0.00 0.00 1+1 ._ZlsRSoRK18ResidueTemplateSet [609] 1 ._ZlsRSoRK18ResidueTemplateSet [609] ----------------------------------------------- This table describes the call tree of the program, and was sorted by the total amount of time spent in each function and its children. Each entry in this table consists of several lines. The line with the index number at the left hand margin lists the current function. The lines above it list the functions that called this function, and the lines below it list the functions this one called. This line lists: index A unique number given to each element of the table. Index numbers are sorted numerically. The index number is printed next to every function name so it is easier to look up where the function in the table. % time This is the percentage of the `total' time that was spent in this function and its children. Note that due to different viewpoints, functions excluded by options, etc, these numbers will NOT add up to 100%. self This is the total amount of time spent in this function. children This is the total amount of time propagated into this function by its children. called This is the number of times the function was called. If the function called itself recursively, the number only includes non-recursive calls, and is followed by a `+' and the number of recursive calls. name The name of the current function. The index number is printed after it. If the function is a member of a cycle, the cycle number is printed between the function's name and the index number. For the function's parents, the fields have the following meanings: self This is the amount of time that was propagated directly from the function into this parent. children This is the amount of time that was propagated from the function's children into this parent. called This is the number of times this parent called the function `/' the total number of times the function was called. Recursive calls to the function are not included in the number after the `/'. name This is the name of the parent. The parent's index number is printed after it. If the parent is a member of a cycle, the cycle number is printed between the name and the index number. If the parents of the function cannot be determined, the word `' is printed in the `name' field, and all the other fields are blank. For the function's children, the fields have the following meanings: self This is the amount of time that was propagated directly from the child into the function. children This is the amount of time that was propagated from the child's children to the function. called This is the number of times the function called this child `/' the total number of times the child was called. Recursive calls by the child are not listed in the number after the `/'. name This is the name of the child. The child's index number is printed after it. If the child is a member of a cycle, the cycle number is printed between the name and the index number. If there are any cycles (circles) in the call graph, there is an entry for the cycle-as-a-whole. This entry shows who called the cycle (as parents) and the members of the cycle (as children.) The `+' recursive calls entry shows the number of function calls that were internal to the cycle, and the calls entry for each member shows, for that member, how many times it was called from other members of the cycle. Index by function name [57] ._Z10IsStringInPKcS0_ [310] ._ZN9__gnu_cxx17__normal_iteratorIPPNS_15_Hashtable_nodeISt4pairIKSsP9PointListEEESt6vectorIS8_SaIS8_EEEC1ERKS9_ [483] ._ZNSt12_Vector_baseIP8SPoint3DSaIS1_EEC2ERKS2_ [37] ._Z10MarkHetatmP10CAtomArray [343] ._ZN9__gnu_cxx17__normal_iteratorIPPcSt6vectorIS1_SaIS1_EEEC1ERKS2_ [484] ._ZNSt12_Vector_baseIP8SPoint3DSaIS1_EED2Ev [243] ._Z10ParseFloatPfPKcii [468] ._ZN9__gnu_cxx17__normal_iteratorIPPcSt6vectorIS1_SaIS1_EEEC1Ev [448] ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE11_M_allocateEm [244] ._Z10ParseQuotePcPKcii [393] ._ZN9__gnu_cxx17__normal_iteratorIPPcSt6vectorIS1_SaIS1_EEEppEi [449] ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE12_Vector_implC1ERKSC_ [73] ._Z11FindPdbFilePcPKcS1_ [514] ._ZN9__gnu_cxx17__normal_iteratorIPPcSt6vectorIS1_SaIS1_EEEppEv [450] ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE12_Vector_implD1Ev [56] ._Z11ParseDoublePdPKcii [136] ._ZN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEC1ERKS1_ [431] ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE13_M_deallocateEPSB_m [20] ._Z11ParseStringPcPKcii [346] ._ZN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEpLERKl [485] ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EEC2ERKSC_ [569] ._Z11fatal_errorPcz [141] ._ZN9__gnu_cxx17__normal_iteratorIPiSt6vectorIiSaIiEEEppEv [497] ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EEC2EmRKSC_ [181] ._Z12FindDsspFilePcPKcS1_ [217] ._ZN9__gnu_cxx17__stl_hash_stringEPKc [451] ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EED2Ev [570] ._Z12GetCoordListP8CProtein [164] ._ZN9__gnu_cxx19_Hashtable_iteratorISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EEC1EPNS_15_Hashtable_nodeIS8_EEPNS_9hashtableIS8_S3_S9_SB_SC_SD_EE [529] ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE11_M_allocateEm [140] ._Z12IsFileExistsPKc [78] ._ZN9__gnu_cxx19_Hashtable_iteratorISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EEppEi [530] ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE12_Vector_implC1ERKS9_ [571] ._Z12assign_typesP8CProteinP23ForceFieldParametersSetPc [84] ._ZN9__gnu_cxx19_Hashtable_iteratorISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EEppEv [531] ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE12_Vector_implD1Ev [178] ._Z13setdebugleveli [338] ._ZN9__gnu_cxx19_Hashtable_iteratorISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EEC1EPNS_15_Hashtable_nodeIS5_EEPNS_9hashtableIS5_SsS7_S9_SB_SC_EE [520] ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE13_M_deallocateEPS8_m [572] ._Z15DumpEnvironmentP8_IO_FILEPP16CPropertiesArrayi [361] ._ZN9__gnu_cxx19_Hashtable_iteratorISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EEC1Ev [594] ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EEC2ERKS9_ [68] ._Z15FindProteinFilePcPKcS1_PS1_ [158] ._ZN9__gnu_cxx19_Hashtable_iteratorISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EEppEi [540] ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EEC2EmRKS9_ [142] ._Z16PrintEnvironmentR16CPropertiesArrayP8_IO_FILE [159] ._ZN9__gnu_cxx19_Hashtable_iteratorISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EEppEv [532] ._ZNSt12_Vector_baseIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EED2Ev [51] ._Z17ConvertStructCodec [297] ._ZN9__gnu_cxx25_Hashtable_const_iteratorISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EEC1EPKNS_15_Hashtable_nodeIS8_EEPKNS_9hashtableIS8_S3_S9_SB_SC_SD_EE [515] ._ZNSt12_Vector_baseIPcSaIS0_EE11_M_allocateEm [69] ._Z19PathFindProteinFilePcPKcS1_PS1_ [268] ._ZN9__gnu_cxx8hash_mapIN8Neighbor4CellEP11SuperVectorIiENS2_4HashENS2_5EqualESaIS5_EE3endEv [556] ._ZNSt12_Vector_baseIPcSaIS0_EE12_Vector_implC1ERKS1_ [27] ._Z22GetNonExcludedResiduesP10CAtomArrayR7StrList [266] ._ZN9__gnu_cxx8hash_mapIN8Neighbor4CellEP11SuperVectorIiENS2_4HashENS2_5EqualESaIS5_EE5beginEv [557] ._ZNSt12_Vector_baseIPcSaIS0_EE12_Vector_implD1Ev [304] ._Z5debugiPcz [17] ._ZN9__gnu_cxx8hash_mapIN8Neighbor4CellEP11SuperVectorIiENS2_4HashENS2_5EqualESaIS5_EE6insertERKSt4pairIKS2_S5_E [511] ._ZNSt12_Vector_baseIPcSaIS0_EE13_M_deallocateEPS0_m [426] ._Z7warningPcz [120] ._ZN9__gnu_cxx8hash_mapIN8Neighbor4CellEP11SuperVectorIiENS2_4HashENS2_5EqualESaIS5_EEC2Ev [558] ._ZNSt12_Vector_baseIPcSaIS0_EEC2ERKS1_ [82] ._Z8FindFilePcPPKcS2_S2_S2_ [72] ._ZN9__gnu_cxx8hash_mapIN8Neighbor4CellEP11SuperVectorIiENS2_4HashENS2_5EqualESaIS5_EED2Ev [559] ._ZNSt12_Vector_baseIPcSaIS0_EED2Ev [394] ._Z8StrLowerPc [344] ._ZN9__gnu_cxx8hash_mapISsP9PointListNS_4hashISsEESt8equal_toISsESaIS2_EE3endEv [208] ._ZNSt12_Vector_baseIiSaIiEE11_M_allocateEm [544] ._Z8tostringRK7StrList [154] ._ZN9__gnu_cxx8hash_mapISsP9PointListNS_4hashISsEESt8equal_toISsESaIS2_EE4findERKSs [323] ._ZNSt12_Vector_baseIiSaIiEE12_Vector_implC1ERKS0_ [494] ._Z9IsVerbosev [290] ._ZN9__gnu_cxx8hash_mapISsP9PointListNS_4hashISsEESt8equal_toISsESaIS2_EE5beginEv [324] ._ZNSt12_Vector_baseIiSaIiEE12_Vector_implD1Ev [62] ._Z9ParseCharPcPKci [293] ._ZN9__gnu_cxx8hash_mapISsP9PointListNS_4hashISsEESt8equal_toISsESaIS2_EEC1Ev [305] ._ZNSt12_Vector_baseIiSaIiEE13_M_deallocateEPim [106] ._Z9ParseLongPlPKcii [189] ._ZN9__gnu_cxx8hash_mapISsP9PointListNS_4hashISsEESt8equal_toISsESaIS2_EED1Ev [325] ._ZNSt12_Vector_baseIiSaIiEEC2ERKS0_ [492] ._ZN10CAtomArray11DecAtomMarkEi [152] ._ZN9__gnu_cxx8hash_mapISsP9PointListNS_4hashISsEESt8equal_toISsESaIS2_EEixERKSs [171] ._ZNSt12_Vector_baseIiSaIiEED2Ev [33] ._ZN10CAtomArray18ExtractMarkedAtomsEi [215] ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE11_M_get_nodeEv [165] ._ZNSt4pairIKN8Neighbor4CellEP11SuperVectorIiEEC1IS1_S5_EERKS_IT_T0_E [245] ._ZN10CAtomArray5WriteEPKc [156] ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE11_M_new_nodeERKS8_ [417] ._ZNSt4pairIKSsP9PointListEC1ERKS3_ [28] ._ZN10CAtomArray7AddAtomEP5SAtomb [329] ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE11_M_put_nodeEPNS_15_Hashtable_nodeIS8_EE [418] ._ZNSt4pairIKSsP9PointListEC1ERS0_RKS2_ [66] ._ZN10CAtomArray7GetAtomEi [18] ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE13insert_uniqueERKS8_ [373] ._ZNSt4pairIKSsP9PointListED1Ev [147] ._ZN10CAtomArray8NumAtomsEv [172] ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE14_M_delete_nodeEPNS_15_Hashtable_nodeIS8_EE [202] ._ZNSt4pairIN8Neighbor4CellEP11SuperVectorIiEEC1ERKS1_RKS4_ [264] ._ZN10CAtomArrayC1Ev [121] ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE21_M_initialize_bucketsEm [166] ._ZNSt4pairIN9__gnu_cxx19_Hashtable_iteratorIS_IKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EEEbEC1ERKSE_RKb [265] ._ZN10CAtomArrayC2Ev [22] ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE22insert_unique_noresizeERKS8_ [135] ._ZNSt6vectorIP5PointSaIS1_EE13_M_insert_auxEN9__gnu_cxx17__normal_iteratorIPS1_S3_EERKS1_ [50] ._ZN10CAtomArrayD1Ev [269] ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE3endEv [337] ._ZNSt6vectorIP5PointSaIS1_EE3endEv [55] ._ZN10CAtomArrayD2Ev [267] ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE5beginEv [353] ._ZNSt6vectorIP5PointSaIS1_EE5beginEv [246] ._ZN10CStdioFile5CloseEv [88] ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE5clearEv [134] ._ZNSt6vectorIP5PointSaIS1_EE9push_backERKS1_ [9] ._ZN11CLISPParser7GetLineEPc [43] ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EE6resizeEm [419] ._ZNSt6vectorIP5PointSaIS1_EEC1ERKS2_ [455] ._ZN11CLISPParserC1EPKc [122] ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EEC1EmRKS9_RKSC_RKSD_ [420] ._ZNSt6vectorIP5PointSaIS1_EED1Ev [260] ._ZN11CLISPParserD1Ev [77] ._ZN9__gnu_cxx9hashtableISt4pairIKN8Neighbor4CellEP11SuperVectorIiEES3_NS3_4HashESt10_Select1stIS8_ENS3_5EqualESaIS7_EED1Ev [435] ._ZNSt6vectorIP5PointSaIS1_EEixEm [456] ._ZN11SuperVectorIP8SPoint3DEC1Ev [405] ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE11_M_get_nodeEv [184] ._ZNSt6vectorIP8SPoint3DSaIS1_EE13_M_insert_auxEN9__gnu_cxx17__normal_iteratorIPS1_S3_EERKS1_ [457] ._ZN11SuperVectorIP8SPoint3DED1Ev [284] ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE11_M_new_nodeERKS5_ [227] ._ZNSt6vectorIP8SPoint3DSaIS1_EE3endEv [545] ._ZN11SuperVectorIPcEC2Ev [406] ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE11_M_put_nodeEPNS_15_Hashtable_nodeIS5_EE [387] ._ZNSt6vectorIP8SPoint3DSaIS1_EE5beginEv [546] ._ZN11SuperVectorIPcED2Ev [407] ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE14_M_delete_nodeEPNS_15_Hashtable_nodeIS5_EE [64] ._ZNSt6vectorIP8SPoint3DSaIS1_EE9push_backERKS1_ [93] ._ZN11SuperVectorIiE6extendERS0_ [153] ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE14find_or_insertERKS5_ [486] ._ZNSt6vectorIP8SPoint3DSaIS1_EEC2ERKS2_ [151] ._ZN11SuperVectorIiEC1Ev [294] ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE21_M_initialize_bucketsEm [487] ._ZNSt6vectorIP8SPoint3DSaIS1_EED2Ev [123] ._ZN11SuperVectorIiED1Ev [345] ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE3endEv [199] ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE14_M_fill_insertENS0_17__normal_iteratorIPSB_SD_EEmRKSB_ [119] ._ZN12SuperHashMapIN8Neighbor4CellEP11SuperVectorIiENS1_4HashENS1_5EqualEEC1Ev [155] ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE4findERS2_ [177] ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE20_M_allocate_and_copyIPSB_EESF_mT_SG_ [71] ._ZN12SuperHashMapIN8Neighbor4CellEP11SuperVectorIiENS1_4HashENS1_5EqualEED1Ev [291] ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE5beginEv [288] ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE3endEv [16] ._ZN12SuperHashMapIN8Neighbor4CellEP11SuperVectorIiENS1_4HashENS1_5EqualEEixERKS1_ [190] ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE5clearEv [498] ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE4swapERSD_ [52] ._ZN13CNeighborhood17GeneratePointListEP10CAtomArray [182] ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EE6resizeEm [118] ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE5beginEv [60] ._ZN13CNeighborhood18GetNeighborIndexesERK8SPoint3D [295] ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EEC1EmRKS7_RKSB_RKSC_ [200] ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE6insertENS0_17__normal_iteratorIPSB_SD_EEmRKSB_ [10] ._ZN13CNeighborhoodC1EP10CAtomArrayd [191] ._ZN9__gnu_cxx9hashtableISt4pairIKSsP9PointListESsNS_4hashISsEESt10_Select1stIS5_ESt8equal_toISsESaIS4_EED1Ev [128] ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EE7reserveEm [44] ._ZN13CNeighborhoodD1Ev [365] ._ZN9__gnu_cxxmiIPKP5PointS4_St6vectorIS2_SaIS2_EEEENS_17__normal_iteratorIT_T1_E15difference_typeERKSB_RKNS8_IT0_SA_EE [488] ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EEC1ERKSC_ [127] ._ZN14CProteinObjectC1Em [280] ._ZN9__gnu_cxxmiIPKP8SPoint3DS4_St6vectorIS2_SaIS2_EEEENS_17__normal_iteratorIT_T1_E15difference_typeERKSB_RKNS8_IT0_SA_EE [499] ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EEC1EmRKSB_RKSC_ [74] ._ZN14CProteinObjectC2Ev [58] ._ZN9__gnu_cxxmiIPKPNS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESD_St6vectorISB_SaISB_EEEENS_17__normal_iteratorIT_T1_E15difference_typeERKSK_RKNSH_IT0_SJ_EE [146] ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EED1Ev [70] ._ZN14CProteinObjectD2Ev [332] ._ZN9__gnu_cxxmiIPKPNS_15_Hashtable_nodeISt4pairIKSsP9PointListEEESA_St6vectorIS8_SaIS8_EEEENS_17__normal_iteratorIT_T1_E15difference_typeERKSH_RKNSE_IT0_SG_EE [47] ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESaISB_EEixEm [573] ._ZN15EnvironmentList9GetValuesEii [508] ._ZN9__gnu_cxxmiIPKPcS3_St6vectorIS1_SaIS1_EEEENS_17__normal_iteratorIT_T1_E15difference_typeERKSA_RKNS7_IT0_S9_EE [595] ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE14_M_fill_insertENS0_17__normal_iteratorIPS8_SA_EEmRKS8_ [83] ._ZN15SAtomProperties12SetNegChargeEP5SAtom [257] ._ZN9__gnu_cxxmiIPKiS2_St6vectorIiSaIiEEEENS_17__normal_iteratorIT_T1_E15difference_typeERKS9_RKNS6_IT0_S8_EE [596] ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE20_M_allocate_and_copyIPS8_EESC_mT_SD_ [67] ._ZN15SAtomProperties12SetPosChargeEP5SAtom [469] ._ZN9__gnu_cxxmiIPPNS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESC_St6vectorISB_SaISB_EEEENS_17__normal_iteratorIT_T1_E15difference_typeERKSJ_RKNSG_IT0_SI_EE [560] ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE3endEv [65] ._ZN15SAtomProperties12SetVDWVolumeEP5SAtom [583] ._ZN9__gnu_cxxmiIPPNS_15_Hashtable_nodeISt4pairIKSsP9PointListEEES9_St6vectorIS8_SaIS8_EEEENS_17__normal_iteratorIT_T1_E15difference_typeERKSG_RKNSD_IT0_SF_EE [541] ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE4swapERSA_ [79] ._ZN15SAtomProperties14SetResidueNameEP5SAtom [271] ._ZN9__gnu_cxxmiIPiS1_St6vectorIiSaIiEEEENS_17__normal_iteratorIT_T1_E15difference_typeERKS8_RKNS5_IT0_S7_EE [259] ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE5beginEv [61] ._ZN15SAtomProperties16SetChargeWithHisEP5SAtom [112] ._ZN9__gnu_cxxneIPKP8SPoint3DSt6vectorIS2_SaIS2_EEEEbRKNS_17__normal_iteratorIT_T0_EESD_ [597] ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE6insertENS0_17__normal_iteratorIPS8_SA_EEmRKS8_ [109] ._ZN15SAtomProperties16SetPartialChargeEP5SAtom [396] ._ZN9__gnu_cxxneIPKPcSt6vectorIS1_SaIS1_EEEEbRKNS_17__normal_iteratorIT_T0_EESC_ [296] ._ZNSt6vectorIPN9__gnu_cxx15_Hashtable_nodeISt4pairIKSsP9PointListEEESaIS8_EE7reserveEm [116] ._ZN15SAtomProperties18SetFunctionalGroupEP5SAtom [357] 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._ZNSt12_Vector_baseIP8SPoint3DSaIS1_EE11_M_allocateEm [145] ._ZnwmPv [331] ._ZN9__gnu_cxx17__normal_iteratorIPP8SPoint3DSt6vectorIS2_SaIS2_EEEC1ERKS3_ [481] ._ZNSt12_Vector_baseIP8SPoint3DSaIS1_EE12_Vector_implC1ERKS2_ [2] .main [385] ._ZN9__gnu_cxx17__normal_iteratorIPP8SPoint3DSt6vectorIS2_SaIS2_EEEppEv [482] ._ZNSt12_Vector_baseIP8SPoint3DSaIS1_EE12_Vector_implD1Ev [170] .stat [138] ._ZN9__gnu_cxx17__normal_iteratorIPPNS_15_Hashtable_nodeISt4pairIKN8Neighbor4CellEP11SuperVectorIiEEEESt6vectorISB_SaISB_EEEC1ERKSC_ [380] ._ZNSt12_Vector_baseIP8SPoint3DSaIS1_EE13_M_deallocateEPS1_m