# Makefile.in generated by automake 1.9.2 from Makefile.am. # framework/factories/Makefile. Generated from Makefile.in by configure. # Copyright (C) 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002, # 2003, 2004 Free Software Foundation, Inc. # This Makefile.in is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, # with or without modifications, as long as this notice is preserved. # This program is distributed in the hope that it will be useful, # but WITHOUT ANY WARRANTY, to the extent permitted by law; without # even the implied warranty of MERCHANTABILITY or FITNESS FOR A # PARTICULAR PURPOSE. # factories SOURCES = $(libfactories_a_SOURCES) srcdir = . top_srcdir = ../.. pkgdatadir = $(datadir)/protomol pkglibdir = $(libdir)/protomol pkgincludedir = $(includedir)/protomol top_builddir = ../.. am__cd = CDPATH="$${ZSH_VERSION+.}$(PATH_SEPARATOR)" && cd INSTALL = /usr/bin/install -c install_sh_DATA = $(install_sh) -c -m 644 install_sh_PROGRAM = $(install_sh) -c install_sh_SCRIPT = $(install_sh) -c INSTALL_HEADER = $(INSTALL_DATA) transform = $(program_transform_name) NORMAL_INSTALL = : PRE_INSTALL = : POST_INSTALL = : NORMAL_UNINSTALL = : PRE_UNINSTALL = : POST_UNINSTALL = : DIST_COMMON = $(srcdir)/Makefile.am $(srcdir)/Makefile.in \ $(top_srcdir)/Makefile.depend subdir = framework/factories ACLOCAL_M4 = $(top_srcdir)/aclocal.m4 am__aclocal_m4_deps = $(top_srcdir)/configure.in am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \ $(ACLOCAL_M4) mkinstalldirs = $(install_sh) -d CONFIG_HEADER = $(top_builddir)/protomol_config.h CONFIG_CLEAN_FILES = LIBRARIES = $(noinst_LIBRARIES) ARFLAGS = cru libfactories_a_LIBADD = am__objects_1 = registerForceExemplars.$(OBJEXT) \ registerForceExemplarsCutoff.$(OBJEXT) \ registerIntegratorExemplars.$(OBJEXT) \ registerOutputExemplars.$(OBJEXT) \ registerTopologyExemplars.$(OBJEXT) am__objects_2 = am_libfactories_a_OBJECTS = $(am__objects_1) $(am__objects_2) libfactories_a_OBJECTS = $(am_libfactories_a_OBJECTS) DEFAULT_INCLUDES = -I. -I$(srcdir) -I$(top_builddir) depcomp = am__depfiles_maybe = CXXCOMPILE = $(CXX) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) \ $(AM_CPPFLAGS) $(CPPFLAGS) $(AM_CXXFLAGS) $(CXXFLAGS) CXXLD = $(CXX) CXXLINK = $(CXXLD) $(AM_CXXFLAGS) $(CXXFLAGS) $(AM_LDFLAGS) $(LDFLAGS) \ -o $@ COMPILE = $(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) \ $(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS) CCLD = $(CC) LINK = $(CCLD) $(AM_CFLAGS) $(CFLAGS) $(AM_LDFLAGS) $(LDFLAGS) -o $@ SOURCES = $(libfactories_a_SOURCES) DIST_SOURCES = $(libfactories_a_SOURCES) ETAGS = etags CTAGS = ctags DISTFILES = $(DIST_COMMON) $(DIST_SOURCES) $(TEXINFOS) $(EXTRA_DIST) ACLOCAL = ${SHELL} /afs/nd.edu/user25/tcickovs/Research/BORN-ION/protomol/config/missing --run aclocal-1.9 AMDEP_FALSE = # AMDEP_TRUE = AMTAR = ${SHELL} /afs/nd.edu/user25/tcickovs/Research/BORN-ION/protomol/config/missing --run tar AR1 = ar AR2 = ar cru AUTOCONF = ${SHELL} /afs/nd.edu/user25/tcickovs/Research/BORN-ION/protomol/config/missing --run autoconf AUTOHEADER = ${SHELL} /afs/nd.edu/user25/tcickovs/Research/BORN-ION/protomol/config/missing --run autoheader AUTOMAKE = ${SHELL} /afs/nd.edu/user25/tcickovs/Research/BORN-ION/protomol/config/missing --run automake-1.9 AWK = gawk BOOST_CFLAGS = BOOST_LIBS = CC = icpc CCDEPMODE = depmode=none CFLAGS = -Wall -wd810,383,981,279,444,1572 -O3 -ip -DNDEBUG CLEANFILES = -r *~ CPPFLAGS = CXX = icpc CXXCPP = icpc -E CXXDEPMODE = depmode=none CXXFLAGS = -Wall -wd810,383,981,279,444,1572 -O3 -ip -DNDEBUG CYGPATH_W = echo DEFS = -DHAVE_CONFIG_H DEPDIR = .deps DEPFLAGS = ECHO_C = ECHO_N = -n ECHO_T = EGREP = grep -E EXEEXT = FFT_CFLAGS = FFT_LIBS = GLUT_CFLAGS = GLUT_LIBS = INSTALL_DATA = ${INSTALL} -m 644 INSTALL_PROGRAM = ${INSTALL} INSTALL_SCRIPT = ${INSTALL} INSTALL_STRIP_PROGRAM = ${SHELL} $(install_sh) -c -s LAPACK_CFLAGS = -I/afs/nd.edu/user25/tcickovs/Research/LAPACK/include -DHAVE_LAPACK -DHAVE_SIMTK_LAPACK LAPACK_LIBS = -L/afs/nd.edu/user25/tcickovs/Research/LAPACK/lib -lSimTKlapack LDFLAGS = LIBOBJS = LIBS = -lm -lnsl LTLIBOBJS = LT_AGE = 0 LT_CURRENT = LT_RELEASE = 2.0 LT_REVISION = 0 MAKEDEPEND = makedepend MAKEINFO = ${SHELL} /afs/nd.edu/user25/tcickovs/Research/BORN-ION/protomol/config/missing --run makeinfo OBJEXT = o PACKAGE = protomol PACKAGE_BUGREPORT = protomol@cse.nd.edu PACKAGE_NAME = protomol PACKAGE_STRING = protomol 2.0.4 PACKAGE_TARNAME = protomol PACKAGE_VERSION = 2.0.4 PATH_SEPARATOR = : PNG_LIBS = -lpng PROTOMOL_MAJOR_VERSION = 2 PROTOMOL_MINOR_VERSION = 0 PROTOMOL_PATCH_LEVEL = 4 RANLIB = ranlib SET_MAKE = SHELL = /bin/sh SOCKET_LIBS = STRIP = VERSION = 2.0.4 X_CFLAGS = X_EXTRA_LIBS = X_LIBS = X_PRE_LIBS = -lSM -lICE ac_ct_CC = icpc ac_ct_CXX = icpc ac_ct_RANLIB = ranlib ac_ct_STRIP = am__fastdepCC_FALSE = am__fastdepCC_TRUE = # am__fastdepCXX_FALSE = am__fastdepCXX_TRUE = # am__include = include am__leading_dot = . am__quote = am__tar = ${AMTAR} chof - "$$tardir" am__untar = ${AMTAR} xf - bindir = ${exec_prefix}/bin build_alias = datadir = ${prefix}/share exec_prefix = ${prefix} host_alias = includedir = ${prefix}/include infodir = ${prefix}/info install_sh = /afs/nd.edu/user25/tcickovs/Research/BORN-ION/protomol/config/install-sh libdir = ${exec_prefix}/lib libexecdir = ${exec_prefix}/libexec localstatedir = ${prefix}/var mandir = ${prefix}/man mkdir_p = mkdir -p -- oldincludedir = /usr/include prefix = /usr/local program_transform_name = s,x,x, sbindir = ${exec_prefix}/sbin sharedstatedir = ${prefix}/com sysconfdir = ${prefix}/etc target_alias = AUTOMAKE_OPTIONS = foreign dist-tarZ no-dependencies #Change AR Flag AR = $(AR1) libfactories_a_AR = $(AR2) P_BASE = $(top_srcdir)/framework/base P_IO = $(top_srcdir)/framework/io P_PARALLEL = $(top_srcdir)/framework/parallel P_TOPOLOGY = $(top_srcdir)/framework/topology P_FORCES = $(top_srcdir)/framework/forces P_IMD = $(top_srcdir)/framework/imd P_INTEGRATORS = $(top_srcdir)/framework/integrators P_FRONTEND = $(top_srcdir)/framework/frontend P_FACTORIES = $(top_srcdir)/framework/factories # factories Sources P_FACTORIES_SRC = \ registerForceExemplars.cpp\ registerForceExemplarsCutoff.cpp\ registerIntegratorExemplars.cpp\ registerOutputExemplars.cpp\ registerTopologyExemplars.cpp # factories Includes P_FACTORIES_H = \ registerForceExemplars.h\ registerForceExemplarsCutoff.h\ registerIntegratorExemplars.h\ registerOutputExemplars.h\ registerTopologyExemplars.h # Temporary library to get subdirectory source files, blech! noinst_LIBRARIES = libfactories.a libfactories_a_SOURCES = $(P_FACTORIES_SRC) $(P_FACTORIES_H) INCLUDES = -I$(P_BASE) -I$(P_IO) -I$(P_PARALLEL) -I$(P_TOPOLOGY) -I$(P_FORCES) -I$(P_IMD) -I$(P_INTEGRATORS) -I$(P_FRONTEND) -I$(P_FACTORIES) SOURCEFILES = $(P_FACTORIES_SRC) all: all-am .SUFFIXES: .SUFFIXES: .cpp .o .obj $(srcdir)/Makefile.in: $(srcdir)/Makefile.am $(top_srcdir)/Makefile.depend $(am__configure_deps) @for dep in $?; do \ case '$(am__configure_deps)' in \ *$$dep*) \ cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh \ && exit 0; \ exit 1;; \ esac; \ done; \ echo ' cd $(top_srcdir) && $(AUTOMAKE) --foreign framework/factories/Makefile'; \ cd $(top_srcdir) && \ $(AUTOMAKE) --foreign framework/factories/Makefile .PRECIOUS: Makefile Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status @case '$?' in \ *config.status*) \ cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh;; \ *) \ echo ' cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@ $(am__depfiles_maybe)'; \ cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@ $(am__depfiles_maybe);; \ esac; $(top_builddir)/config.status: $(top_srcdir)/configure $(CONFIG_STATUS_DEPENDENCIES) cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh $(top_srcdir)/configure: $(am__configure_deps) cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh $(ACLOCAL_M4): $(am__aclocal_m4_deps) cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh clean-noinstLIBRARIES: -test -z "$(noinst_LIBRARIES)" || rm -f $(noinst_LIBRARIES) libfactories.a: $(libfactories_a_OBJECTS) $(libfactories_a_DEPENDENCIES) -rm -f libfactories.a $(libfactories_a_AR) libfactories.a $(libfactories_a_OBJECTS) $(libfactories_a_LIBADD) $(RANLIB) libfactories.a mostlyclean-compile: -rm -f *.$(OBJEXT) distclean-compile: -rm -f *.tab.c .cpp.o: $(CXXCOMPILE) -c -o $@ $< .cpp.obj: $(CXXCOMPILE) -c -o $@ `$(CYGPATH_W) '$<'` uninstall-info-am: ID: $(HEADERS) $(SOURCES) $(LISP) $(TAGS_FILES) list='$(SOURCES) $(HEADERS) $(LISP) $(TAGS_FILES)'; \ unique=`for i in $$list; do \ if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \ done | \ $(AWK) ' { files[$$0] = 1; } \ END { for (i in files) print i; }'`; \ mkid -fID $$unique tags: TAGS TAGS: $(HEADERS) $(SOURCES) $(TAGS_DEPENDENCIES) \ $(TAGS_FILES) $(LISP) tags=; \ here=`pwd`; \ list='$(SOURCES) $(HEADERS) $(LISP) $(TAGS_FILES)'; \ unique=`for i in $$list; do \ if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \ done | \ $(AWK) ' { files[$$0] = 1; } \ END { for (i in files) print i; }'`; \ if test -z "$(ETAGS_ARGS)$$tags$$unique"; then :; else \ test -n "$$unique" || unique=$$empty_fix; \ $(ETAGS) $(ETAGSFLAGS) $(AM_ETAGSFLAGS) $(ETAGS_ARGS) \ $$tags $$unique; \ fi ctags: CTAGS CTAGS: $(HEADERS) $(SOURCES) $(TAGS_DEPENDENCIES) \ $(TAGS_FILES) $(LISP) tags=; \ here=`pwd`; \ list='$(SOURCES) $(HEADERS) $(LISP) $(TAGS_FILES)'; \ unique=`for i in $$list; do \ if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \ done | \ $(AWK) ' { files[$$0] = 1; } \ END { for (i in files) print i; }'`; \ test -z "$(CTAGS_ARGS)$$tags$$unique" \ || $(CTAGS) $(CTAGSFLAGS) $(AM_CTAGSFLAGS) $(CTAGS_ARGS) \ $$tags $$unique GTAGS: here=`$(am__cd) $(top_builddir) && pwd` \ && cd $(top_srcdir) \ && gtags -i $(GTAGS_ARGS) $$here distclean-tags: -rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags distdir: $(DISTFILES) $(mkdir_p) $(distdir)/../.. @srcdirstrip=`echo "$(srcdir)" | sed 's|.|.|g'`; \ topsrcdirstrip=`echo "$(top_srcdir)" | sed 's|.|.|g'`; \ list='$(DISTFILES)'; for file in $$list; do \ case $$file in \ $(srcdir)/*) file=`echo "$$file" | sed "s|^$$srcdirstrip/||"`;; \ $(top_srcdir)/*) file=`echo "$$file" | sed "s|^$$topsrcdirstrip/|$(top_builddir)/|"`;; \ esac; \ if test -f $$file || test -d $$file; then d=.; else d=$(srcdir); fi; \ dir=`echo "$$file" | sed -e 's,/[^/]*$$,,'`; \ if test "$$dir" != "$$file" && test "$$dir" != "."; then \ dir="/$$dir"; \ $(mkdir_p) "$(distdir)$$dir"; \ else \ dir=''; \ fi; \ if test -d $$d/$$file; then \ if test -d $(srcdir)/$$file && test $$d != $(srcdir); then \ cp -pR $(srcdir)/$$file $(distdir)$$dir || exit 1; \ fi; \ cp -pR $$d/$$file $(distdir)$$dir || exit 1; \ else \ test -f $(distdir)/$$file \ || cp -p $$d/$$file $(distdir)/$$file \ || exit 1; \ fi; \ done check-am: all-am check: check-am all-am: Makefile $(LIBRARIES) installdirs: install: install-am install-exec: install-exec-am install-data: install-data-am uninstall: uninstall-am install-am: all-am @$(MAKE) $(AM_MAKEFLAGS) install-exec-am install-data-am installcheck: installcheck-am install-strip: $(MAKE) $(AM_MAKEFLAGS) INSTALL_PROGRAM="$(INSTALL_STRIP_PROGRAM)" \ install_sh_PROGRAM="$(INSTALL_STRIP_PROGRAM)" INSTALL_STRIP_FLAG=-s \ `test -z '$(STRIP)' || \ echo "INSTALL_PROGRAM_ENV=STRIPPROG='$(STRIP)'"` install mostlyclean-generic: clean-generic: -test -z "$(CLEANFILES)" || rm -f $(CLEANFILES) distclean-generic: -test -z "$(CONFIG_CLEAN_FILES)" || rm -f $(CONFIG_CLEAN_FILES) maintainer-clean-generic: @echo "This command is intended for maintainers to use" @echo "it deletes files that may require special tools to rebuild." clean: clean-am clean-am: clean-generic clean-noinstLIBRARIES mostlyclean-am distclean: distclean-am -rm -f Makefile distclean-am: clean-am distclean-compile distclean-generic \ distclean-tags dvi: dvi-am dvi-am: html: html-am info: info-am info-am: install-data-am: install-exec-am: install-info: install-info-am install-man: installcheck-am: maintainer-clean: maintainer-clean-am -rm -f Makefile maintainer-clean-am: distclean-am maintainer-clean-generic mostlyclean: mostlyclean-am mostlyclean-am: mostlyclean-compile mostlyclean-generic pdf: pdf-am pdf-am: ps: ps-am ps-am: uninstall-am: uninstall-info-am .PHONY: CTAGS GTAGS all all-am check check-am clean clean-generic \ clean-noinstLIBRARIES ctags distclean distclean-compile \ distclean-generic distclean-tags distdir dvi dvi-am html \ html-am info info-am install install-am install-data \ install-data-am install-exec install-exec-am install-info \ install-info-am install-man install-strip installcheck \ installcheck-am installdirs maintainer-clean \ maintainer-clean-generic mostlyclean mostlyclean-compile \ mostlyclean-generic pdf pdf-am ps ps-am tags uninstall \ uninstall-am uninstall-info-am depend: $(SOURCEFILES) $(WRAP) @ if test "$(SOURCEFILES)" != ""; then \ echo "$(MAKEDEPEND) $(DEPFLAGS) $(INCLUDES) $(INILIB_CXX_DEPDIRS) -- --" $(SOURCEFILES); \ $(MAKEDEPEND) $(DEPFLAGS) $(INCLUDES) $(INILIB_CXX_DEPDIRS) -- -- $(SOURCEFILES); \ fi @set fnord $(MAKEFLAGS); amf=$$2; \ if test "$(DEPDIRS)" = ""; then \ foo_dirs="$(SUBDIRS)"; \ else \ foo_dirs="$(DEPDIRS)"; \ fi; \ target=`echo $@ | sed s/-recursive//`; \ list="$$foo_dirs"; for subdir in $$list; do \ echo "Making $$target in $$subdir"; \ (cd $$subdir && $(MAKE) $(AM_MAKEFLAGS) $$target) \ || case "$$amf" in *=*) exit 1;; *k*) fail=yes;; *) exit 1;; esac; \ done; # Tell versions [3.59,3.63) of GNU make to not export all variables. # Otherwise a system limit (for SysV at least) may be exceeded. .NOEXPORT: # DO NOT DELETE registerForceExemplars.o: registerForceExemplars.h registerForceExemplars.o: registerForceExemplarsBonded.h registerForceExemplars.o: registerForceExemplarsCutoff.h registerForceExemplars.o: registerForceExemplarsOther.h registerForceExemplars.o: registerForceExemplarsSimpleFull.h registerForceExemplars.o: registerForceExemplarsFull.h registerForceExemplars.o: registerForceExemplarsFastElectrostatic.h registerForceExemplars.o: ../../framework/topology/Topology.h registerForceExemplars.o: ../../framework/topology/SemiGenericTopology.h registerForceExemplars.o: ../../framework/topology/GenericTopology.h registerForceExemplars.o: ../../framework/base/Atom.h registerForceExemplars.o: ../../framework/base/Real.h registerForceExemplars.o: ../../framework/base/AtomType.h registerForceExemplars.o: ../../framework/topology/Angle.h registerForceExemplars.o: ../../framework/topology/Bond.h registerForceExemplars.o: ../../framework/topology/Torsion.h registerForceExemplars.o: ../../framework/topology/ExclusionTable.h registerForceExemplars.o: ../../framework/base/pmconstants.h registerForceExemplars.o: ../../framework/base/simpleTypes.h registerForceExemplars.o: ../../framework/topology/ExclusionType.h registerForceExemplars.o: ../../framework/base/AbstractEnumType.h registerForceExemplars.o: ../../framework/base/stringutilities.h registerForceExemplars.o: ../../framework/base/Vector3D.h registerForceExemplars.o: ../../framework/base/mathutilities.h registerForceExemplars.o: /usr/include/math.h /usr/include/features.h registerForceExemplars.o: /usr/include/sys/cdefs.h /usr/include/gnu/stubs.h registerForceExemplars.o: /usr/include/bits/huge_val.h registerForceExemplars.o: /usr/include/bits/mathdef.h registerForceExemplars.o: /usr/include/bits/mathcalls.h registerForceExemplars.o: ../../framework/base/Report.h registerForceExemplars.o: ../../framework/topology/LennardJonesParameterTable.h registerForceExemplars.o: ../../framework/topology/LennardJonesParameters.h registerForceExemplars.o: ../../framework/base/Vector3DBlock.h registerForceExemplars.o: ../../framework/base/Proxy.h registerForceExemplars.o: ../../framework/base/Makeable.h registerForceExemplars.o: ../../framework/base/MakeableDefinition.h registerForceExemplars.o: ../../framework/base/Parameter.h registerForceExemplars.o: ../../framework/base/Value.h registerForceExemplars.o: ../../framework/base/ValueType.h registerForceExemplars.o: ../../framework/base/ConstraintValueType.h registerForceExemplars.o: ../../framework/io/CheckpointInputStream.h registerForceExemplars.o: ../../framework/base/StateRestore.h registerForceExemplars.o: ../../framework/base/ScalarStructure.h registerForceExemplars.o: ../../framework/io/CheckpointOutputStream.h registerForceExemplars.o: ../../framework/base/Molecule.h registerForceExemplars.o: ../../framework/topology/BankLennardJonesParameterTable.h registerForceExemplars.o: ../../framework/topology/topologyutilities.h registerForceExemplars.o: ../../framework/base/Matrix3by3.h registerForceExemplars.o: ../../framework/base/Stack.h /usr/include/string.h registerForceExemplars.o: /usr/lib/gcc/i386-redhat-linux/3.4.6/include/stddef.h registerForceExemplars.o: ../../framework/topology/AngleInfo.h registerForceExemplars.o: ../../framework/topology/CellListEnumerator.h registerForceExemplars.o: ../../framework/topology/buildCellLists.h registerForceExemplars.o: ../../framework/topology/VacuumBoundaryConditions.h registerForceExemplars.o: ../../framework/topology/PeriodicBoundaryConditions.h registerForceExemplars.o: ../../framework/topology/CubicCellManager.h registerForceExemplars.o: ../../framework/topology/ArrayCellListStructure.h registerForceExemplars.o: ../../framework/topology/CubicCellLocation.h registerForceExemplars.o: ../../framework/base/Array.h registerForceExemplars.o: ../../framework/base/Array_Fastest.h registerForceExemplars.o: /usr/include/assert.h registerForceExemplarsCutoff.o: registerForceExemplarsCutoff.h registerForceExemplarsCutoff.o: ../../framework/topology/C1SwitchingFunction.h registerForceExemplarsCutoff.o: ../../framework/base/Parameter.h registerForceExemplarsCutoff.o: ../../framework/base/Value.h registerForceExemplarsCutoff.o: ../../framework/base/ValueType.h registerForceExemplarsCutoff.o: ../../framework/base/AbstractEnumType.h registerForceExemplarsCutoff.o: ../../framework/base/stringutilities.h registerForceExemplarsCutoff.o: ../../framework/base/Vector3D.h registerForceExemplarsCutoff.o: ../../framework/base/mathutilities.h registerForceExemplarsCutoff.o: ../../framework/base/pmconstants.h registerForceExemplarsCutoff.o: ../../framework/base/Real.h registerForceExemplarsCutoff.o: ../../framework/base/simpleTypes.h registerForceExemplarsCutoff.o: /usr/include/math.h /usr/include/features.h registerForceExemplarsCutoff.o: /usr/include/sys/cdefs.h registerForceExemplarsCutoff.o: /usr/include/gnu/stubs.h registerForceExemplarsCutoff.o: /usr/include/bits/huge_val.h registerForceExemplarsCutoff.o: /usr/include/bits/mathdef.h registerForceExemplarsCutoff.o: /usr/include/bits/mathcalls.h registerForceExemplarsCutoff.o: ../../framework/base/Report.h registerForceExemplarsCutoff.o: ../../framework/base/ConstraintValueType.h registerForceExemplarsCutoff.o: ../../framework/topology/C1SwitchingFunctionBase.h registerForceExemplarsCutoff.o: ../../framework/base/Matrix3by3.h registerForceExemplarsCutoff.o: ../../framework/topology/C2SwitchingFunction.h registerForceExemplarsCutoff.o: ../../framework/topology/C2SwitchingFunctionBase.h registerForceExemplarsCutoff.o: ../../framework/topology/CnSwitchingFunction.h registerForceExemplarsCutoff.o: ../../framework/topology/CnSwitchingFunctionBase.h registerForceExemplarsCutoff.o: ../../framework/topology/CmpCnCnSwitchingFunction.h registerForceExemplarsCutoff.o: ../../framework/topology/CmpCnCnSwitchingFunctionBase.h registerForceExemplarsCutoff.o: ../../framework/topology/CellListEnumerator_periodicBoundaries.h registerForceExemplarsCutoff.o: ../../framework/topology/CellListEnumerator.h registerForceExemplarsCutoff.o: ../../framework/topology/CubicCellManager.h registerForceExemplarsCutoff.o: ../../framework/topology/ArrayCellListStructure.h registerForceExemplarsCutoff.o: ../../framework/topology/CubicCellLocation.h registerForceExemplarsCutoff.o: ../../framework/base/Array.h registerForceExemplarsCutoff.o: ../../framework/base/Array_Fastest.h registerForceExemplarsCutoff.o: /usr/include/assert.h registerForceExemplarsCutoff.o: ../../framework/topology/PeriodicBoundaryConditions.h registerForceExemplarsCutoff.o: ../../framework/base/Vector3DBlock.h registerForceExemplarsCutoff.o: ../../framework/base/Proxy.h registerForceExemplarsCutoff.o: ../../framework/topology/Topology.h registerForceExemplarsCutoff.o: ../../framework/topology/SemiGenericTopology.h registerForceExemplarsCutoff.o: ../../framework/topology/GenericTopology.h registerForceExemplarsCutoff.o: ../../framework/base/Atom.h registerForceExemplarsCutoff.o: ../../framework/base/AtomType.h registerForceExemplarsCutoff.o: ../../framework/topology/Angle.h registerForceExemplarsCutoff.o: ../../framework/topology/Bond.h registerForceExemplarsCutoff.o: ../../framework/topology/Torsion.h registerForceExemplarsCutoff.o: ../../framework/topology/ExclusionTable.h registerForceExemplarsCutoff.o: ../../framework/topology/ExclusionType.h registerForceExemplarsCutoff.o: ../../framework/topology/LennardJonesParameterTable.h registerForceExemplarsCutoff.o: ../../framework/topology/LennardJonesParameters.h registerForceExemplarsCutoff.o: ../../framework/base/Makeable.h registerForceExemplarsCutoff.o: ../../framework/base/MakeableDefinition.h registerForceExemplarsCutoff.o: ../../framework/io/CheckpointInputStream.h registerForceExemplarsCutoff.o: ../../framework/base/StateRestore.h registerForceExemplarsCutoff.o: ../../framework/base/ScalarStructure.h registerForceExemplarsCutoff.o: ../../framework/io/CheckpointOutputStream.h registerForceExemplarsCutoff.o: ../../framework/base/Molecule.h registerForceExemplarsCutoff.o: ../../framework/topology/BankLennardJonesParameterTable.h registerForceExemplarsCutoff.o: ../../framework/topology/topologyutilities.h registerForceExemplarsCutoff.o: ../../framework/base/Stack.h registerForceExemplarsCutoff.o: /usr/include/string.h registerForceExemplarsCutoff.o: /usr/lib/gcc/i386-redhat-linux/3.4.6/include/stddef.h registerForceExemplarsCutoff.o: ../../framework/topology/AngleInfo.h registerForceExemplarsCutoff.o: ../../framework/topology/buildCellLists.h registerForceExemplarsCutoff.o: ../../framework/topology/CellListEnumerator_standard.h registerForceExemplarsCutoff.o: ../../framework/topology/VacuumBoundaryConditions.h registerForceExemplarsCutoff.o: ../../framework/forces/CoulombForce.h registerForceExemplarsCutoff.o: ../../framework/forces/CoulombForceDiElec.h registerForceExemplarsCutoff.o: ../../framework/forces/CoulombSCPISMForce.h registerForceExemplarsCutoff.o: ../../framework/forces/CoulombBornRadiiForce.h registerForceExemplarsCutoff.o: ../../framework/forces/CoulombEwaldRealForce.h registerForceExemplarsCutoff.o: ../../framework/forces/CoulombEwaldRealTableForce.h registerForceExemplarsCutoff.o: ../../framework/base/LookUpTableBase.h registerForceExemplarsCutoff.o: ../../framework/base/typeSelection.h registerForceExemplarsCutoff.o: ../../framework/forces/CoulombEwaldRealTableForceBase.h registerForceExemplarsCutoff.o: ../../framework/topology/CutoffSwitchingFunction.h registerForceExemplarsCutoff.o: ../../framework/topology/CutoffSwitchingFunctionBase.h registerForceExemplarsCutoff.o: ../../framework/forces/CoulombTableForce.h registerForceExemplarsCutoff.o: ../../framework/forces/CoulombTableForceBase.h registerForceExemplarsCutoff.o: ../../framework/forces/CoulombMultiGridDirectForce.h registerForceExemplarsCutoff.o: ../../framework/forces/CoulombMultiGridDirectForceBase.h registerForceExemplarsCutoff.o: ../../framework/forces/CoulombMultiGridDirectTableForce.h registerForceExemplarsCutoff.o: ../../framework/forces/CoulombMultiGridDirectTableForceBase.h registerForceExemplarsCutoff.o: ../../framework/frontend/ForceFactory.h registerForceExemplarsCutoff.o: ../../framework/frontend/ForceFactoryDetails.h registerForceExemplarsCutoff.o: ../../framework/frontend/Factory.h registerForceExemplarsCutoff.o: ../../framework/forces/Force.h registerForceExemplarsCutoff.o: ../../framework/forces/LennardJonesForce.h registerForceExemplarsCutoff.o: ../../framework/forces/LennardJonesTableForce.h registerForceExemplarsCutoff.o: ../../framework/forces/LennardJonesTableForceBase.h registerForceExemplarsCutoff.o: ../../framework/forces/MagneticDipoleForce.h registerForceExemplarsCutoff.o: ../../framework/forces/NonbondedCutoffSystemForce.h registerForceExemplarsCutoff.o: ../../framework/forces/SystemForce.h registerForceExemplarsCutoff.o: ../../framework/forces/NonbondedCutoffForce.h registerForceExemplarsCutoff.o: ../../framework/parallel/Parallel.h registerForceExemplarsCutoff.o: ../../framework/parallel/ParallelType.h registerForceExemplarsCutoff.o: ../../framework/forces/NonbondedCutoffForceBase.h registerForceExemplarsCutoff.o: ../../framework/forces/NonbondedCutoffBornForce.h registerForceExemplarsCutoff.o: ../../framework/forces/OneAtomPair.h registerForceExemplarsCutoff.o: ../../framework/forces/oneAtomContraints.h registerForceExemplarsCutoff.o: ../../framework/forces/OneAtomPairTwo.h registerForceExemplarsCutoff.o: ../../framework/topology/ShiftSwitchingFunction.h registerForceExemplarsCutoff.o: ../../framework/topology/ShiftSwitchingFunctionBase.h registerForceExemplarsCutoff.o: ../../framework/topology/UniversalSwitchingFunction.h registerForceExemplarsCutoff.o: ../../framework/topology/UniversalSwitchingFunctionBase.h registerIntegratorExemplars.o: ../../framework/integrators/BBKIntegrator.h registerIntegratorExemplars.o: ../../framework/integrators/STSIntegrator.h registerIntegratorExemplars.o: ../../framework/integrators/StandardIntegrator.h registerIntegratorExemplars.o: ../../framework/integrators/Integrator.h registerIntegratorExemplars.o: ../../framework/base/Makeable.h registerIntegratorExemplars.o: ../../framework/base/MakeableDefinition.h registerIntegratorExemplars.o: ../../framework/base/Parameter.h registerIntegratorExemplars.o: ../../framework/base/Value.h registerIntegratorExemplars.o: ../../framework/base/ValueType.h registerIntegratorExemplars.o: ../../framework/base/AbstractEnumType.h registerIntegratorExemplars.o: ../../framework/base/stringutilities.h registerIntegratorExemplars.o: ../../framework/base/Vector3D.h registerIntegratorExemplars.o: ../../framework/base/mathutilities.h registerIntegratorExemplars.o: ../../framework/base/pmconstants.h registerIntegratorExemplars.o: ../../framework/base/Real.h registerIntegratorExemplars.o: ../../framework/base/simpleTypes.h registerIntegratorExemplars.o: /usr/include/math.h /usr/include/features.h registerIntegratorExemplars.o: /usr/include/sys/cdefs.h registerIntegratorExemplars.o: /usr/include/gnu/stubs.h registerIntegratorExemplars.o: /usr/include/bits/huge_val.h registerIntegratorExemplars.o: /usr/include/bits/mathdef.h registerIntegratorExemplars.o: /usr/include/bits/mathcalls.h registerIntegratorExemplars.o: ../../framework/base/Report.h registerIntegratorExemplars.o: ../../framework/base/ConstraintValueType.h registerIntegratorExemplars.o: ../../framework/io/CheckpointInputStream.h registerIntegratorExemplars.o: ../../framework/base/StateRestore.h registerIntegratorExemplars.o: ../../framework/base/Vector3DBlock.h registerIntegratorExemplars.o: ../../framework/base/Proxy.h registerIntegratorExemplars.o: ../../framework/base/ScalarStructure.h registerIntegratorExemplars.o: ../../framework/io/CheckpointOutputStream.h registerIntegratorExemplars.o: ../../framework/integrators/IntegratorDefinition.h registerIntegratorExemplars.o: ../../framework/base/XSC.h registerIntegratorExemplars.o: ../../framework/topology/GenericTopology.h registerIntegratorExemplars.o: ../../framework/base/Atom.h registerIntegratorExemplars.o: ../../framework/base/AtomType.h registerIntegratorExemplars.o: ../../framework/topology/Angle.h registerIntegratorExemplars.o: ../../framework/topology/Bond.h registerIntegratorExemplars.o: ../../framework/topology/Torsion.h registerIntegratorExemplars.o: ../../framework/topology/ExclusionTable.h registerIntegratorExemplars.o: ../../framework/topology/ExclusionType.h registerIntegratorExemplars.o: ../../framework/topology/LennardJonesParameterTable.h registerIntegratorExemplars.o: ../../framework/topology/LennardJonesParameters.h registerIntegratorExemplars.o: ../../framework/base/Molecule.h registerIntegratorExemplars.o: ../../framework/topology/BankLennardJonesParameterTable.h registerIntegratorExemplars.o: ../../framework/integrators/BSplineMOLLYIntegrator.h registerIntegratorExemplars.o: ../../framework/integrators/MOLLYIntegrator.h registerIntegratorExemplars.o: ../../framework/integrators/MTSIntegrator.h registerIntegratorExemplars.o: ../../framework/base/BSplineType.h registerIntegratorExemplars.o: ../../framework/integrators/CGMinimizerIntegrator.h registerIntegratorExemplars.o: ../../framework/integrators/DLMCIntegrator.h registerIntegratorExemplars.o: ../../framework/integrators/MCIntegrator.h registerIntegratorExemplars.o: ../../framework/integrators/DMDLeapfrogIntegrator.h registerIntegratorExemplars.o: ../../framework/integrators/DihedralHMCIntegrator.h registerIntegratorExemplars.o: ../../framework/integrators/EquilibriumMOLLYIntegrator.h registerIntegratorExemplars.o: ../../framework/integrators/HMCIntegrator.h registerIntegratorExemplars.o: ../../framework/integrators/HessianInt.h registerIntegratorExemplars.o: ../../framework/forces/Force.h registerIntegratorExemplars.o: ../../framework/integrators/Hessian.h registerIntegratorExemplars.o: ../../framework/base/typeSelection.h registerIntegratorExemplars.o: ../../framework/integrators/ImpulseIntegrator.h registerIntegratorExemplars.o: ../../framework/frontend/IntegratorFactory.h registerIntegratorExemplars.o: ../../framework/frontend/IntegratorFactoryDetails.h registerIntegratorExemplars.o: ../../framework/frontend/Factory.h registerIntegratorExemplars.o: ../../framework/integrators/LangevinImpulseIntegrator.h registerIntegratorExemplars.o: ../../framework/integrators/LeapfrogIntegrator.h registerIntegratorExemplars.o: ../../framework/integrators/LeapfrogTruncatedShadow.h registerIntegratorExemplars.o: ../../framework/integrators/NPTVerletIntegrator.h registerIntegratorExemplars.o: ../../framework/integrators/NVTVerletIntegrator.h registerIntegratorExemplars.o: ../../framework/integrators/NormModeInt.h registerIntegratorExemplars.o: ../../framework/integrators/NormModeMin.h registerIntegratorExemplars.o: ../../framework/integrators/NormModeDiag.h registerIntegratorExemplars.o: ../../framework/integrators/NormModeVisual.h registerIntegratorExemplars.o: ../../framework/integrators/NoseNVTLeapfrogIntegrator.h registerIntegratorExemplars.o: ../../framework/integrators/PLeapfrogIntegrator.h registerIntegratorExemplars.o: ../../framework/integrators/PaulTrapIntegrator.h registerIntegratorExemplars.o: ../../framework/integrators/ShadowHMCIntegrator.h registerIntegratorExemplars.o: ../../framework/integrators/ModifierShadow.h registerIntegratorExemplars.o: ../../framework/integrators/Modifier.h registerIntegratorExemplars.o: ../../framework/topology/topologyutilities.h registerIntegratorExemplars.o: ../../framework/base/Matrix3by3.h registerIntegratorExemplars.o: ../../framework/base/Stack.h registerIntegratorExemplars.o: /usr/include/string.h registerIntegratorExemplars.o: /usr/lib/gcc/i386-redhat-linux/3.4.6/include/stddef.h registerIntegratorExemplars.o: ../../framework/topology/AngleInfo.h registerIntegratorExemplars.o: registerIntegratorExemplars.h registerIntegratorExemplars.o: ../../framework/base/Vector.h registerOutputExemplars.o: registerOutputExemplars.h registerOutputExemplars.o: ../../framework/frontend/OutputBSDL.h registerOutputExemplars.o: ../../framework/frontend/Output.h registerOutputExemplars.o: ../../framework/base/Makeable.h registerOutputExemplars.o: ../../framework/base/MakeableDefinition.h registerOutputExemplars.o: ../../framework/base/Parameter.h registerOutputExemplars.o: ../../framework/base/Value.h registerOutputExemplars.o: ../../framework/base/ValueType.h registerOutputExemplars.o: ../../framework/base/AbstractEnumType.h registerOutputExemplars.o: ../../framework/base/stringutilities.h registerOutputExemplars.o: ../../framework/base/Vector3D.h registerOutputExemplars.o: ../../framework/base/mathutilities.h registerOutputExemplars.o: ../../framework/base/pmconstants.h registerOutputExemplars.o: ../../framework/base/Real.h registerOutputExemplars.o: ../../framework/base/simpleTypes.h registerOutputExemplars.o: /usr/include/math.h /usr/include/features.h registerOutputExemplars.o: /usr/include/sys/cdefs.h /usr/include/gnu/stubs.h registerOutputExemplars.o: /usr/include/bits/huge_val.h registerOutputExemplars.o: /usr/include/bits/mathdef.h registerOutputExemplars.o: /usr/include/bits/mathcalls.h registerOutputExemplars.o: ../../framework/base/Report.h registerOutputExemplars.o: ../../framework/base/ConstraintValueType.h registerOutputExemplars.o: ../../framework/io/CheckpointInputStream.h registerOutputExemplars.o: ../../framework/base/StateRestore.h registerOutputExemplars.o: ../../framework/base/Vector3DBlock.h registerOutputExemplars.o: ../../framework/base/Proxy.h registerOutputExemplars.o: ../../framework/base/ScalarStructure.h registerOutputExemplars.o: ../../framework/io/CheckpointOutputStream.h registerOutputExemplars.o: ../../framework/frontend/OutputDCDTrajectory.h registerOutputExemplars.o: ../../framework/frontend/OutputDCDTrajectoryVel.h registerOutputExemplars.o: ../../framework/frontend/OutputDiffusion.h registerOutputExemplars.o: ../../framework/frontend/OutputFile.h registerOutputExemplars.o: ../../framework/base/Timer.h registerOutputExemplars.o: ../../framework/frontend/OutputDihedrals.h registerOutputExemplars.o: ../../framework/frontend/OutputEnergies.h registerOutputExemplars.o: ../../framework/frontend/OutputFactory.h registerOutputExemplars.o: ../../framework/frontend/OutputFactoryDetails.h registerOutputExemplars.o: ../../framework/frontend/Factory.h registerOutputExemplars.o: ../../framework/frontend/OutputFinalPDBPos.h registerOutputExemplars.o: ../../framework/frontend/OutputFinalXYZBinPos.h registerOutputExemplars.o: ../../framework/frontend/OutputFinalXYZBinVel.h registerOutputExemplars.o: ../../framework/frontend/OutputFinalXYZPos.h registerOutputExemplars.o: ../../framework/frontend/OutputFinalXYZVel.h registerOutputExemplars.o: ../../framework/frontend/OutputMomentum.h registerOutputExemplars.o: ../../framework/frontend/OutputPDBFramePos.h registerOutputExemplars.o: ../../framework/frontend/OutputPaulTrap.h registerOutputExemplars.o: ../../framework/frontend/OutputREMExchangeRate.h registerOutputExemplars.o: ../../framework/parallel/Parallel.h registerOutputExemplars.o: ../../framework/parallel/ParallelType.h registerOutputExemplars.o: ../../framework/frontend/OutputREMHistory.h registerOutputExemplars.o: ../../framework/frontend/OutputScreen.h registerOutputExemplars.o: ../../framework/frontend/OutputState.h registerOutputExemplars.o: ../../framework/frontend/OutputTemperatures.h registerOutputExemplars.o: ../../framework/frontend/OutputXYZTrajectoryForce.h registerOutputExemplars.o: ../../framework/frontend/OutputXYZTrajectoryPos.h registerOutputExemplars.o: ../../framework/frontend/OutputXYZTrajectoryVel.h registerOutputExemplars.o: ../../framework/frontend/OutputXYZBinTrajectoryPos.h registerOutputExemplars.o: ../../framework/frontend/OutputXYZBinTrajectoryVel.h registerTopologyExemplars.o: registerTopologyExemplars.h registerTopologyExemplars.o: ../../framework/topology/Topology.h registerTopologyExemplars.o: ../../framework/topology/SemiGenericTopology.h registerTopologyExemplars.o: ../../framework/topology/GenericTopology.h registerTopologyExemplars.o: ../../framework/base/Atom.h registerTopologyExemplars.o: ../../framework/base/Real.h registerTopologyExemplars.o: ../../framework/base/AtomType.h registerTopologyExemplars.o: ../../framework/topology/Angle.h registerTopologyExemplars.o: ../../framework/topology/Bond.h registerTopologyExemplars.o: ../../framework/topology/Torsion.h registerTopologyExemplars.o: ../../framework/topology/ExclusionTable.h registerTopologyExemplars.o: ../../framework/base/pmconstants.h registerTopologyExemplars.o: ../../framework/base/simpleTypes.h registerTopologyExemplars.o: ../../framework/topology/ExclusionType.h registerTopologyExemplars.o: ../../framework/base/AbstractEnumType.h registerTopologyExemplars.o: ../../framework/base/stringutilities.h registerTopologyExemplars.o: ../../framework/base/Vector3D.h registerTopologyExemplars.o: ../../framework/base/mathutilities.h registerTopologyExemplars.o: /usr/include/math.h /usr/include/features.h registerTopologyExemplars.o: /usr/include/sys/cdefs.h registerTopologyExemplars.o: /usr/include/gnu/stubs.h registerTopologyExemplars.o: /usr/include/bits/huge_val.h registerTopologyExemplars.o: /usr/include/bits/mathdef.h registerTopologyExemplars.o: /usr/include/bits/mathcalls.h registerTopologyExemplars.o: ../../framework/base/Report.h registerTopologyExemplars.o: ../../framework/topology/LennardJonesParameterTable.h registerTopologyExemplars.o: ../../framework/topology/LennardJonesParameters.h registerTopologyExemplars.o: ../../framework/base/Vector3DBlock.h registerTopologyExemplars.o: ../../framework/base/Proxy.h registerTopologyExemplars.o: ../../framework/base/Makeable.h registerTopologyExemplars.o: ../../framework/base/MakeableDefinition.h registerTopologyExemplars.o: ../../framework/base/Parameter.h registerTopologyExemplars.o: ../../framework/base/Value.h registerTopologyExemplars.o: ../../framework/base/ValueType.h registerTopologyExemplars.o: ../../framework/base/ConstraintValueType.h registerTopologyExemplars.o: ../../framework/io/CheckpointInputStream.h registerTopologyExemplars.o: ../../framework/base/StateRestore.h registerTopologyExemplars.o: ../../framework/base/ScalarStructure.h registerTopologyExemplars.o: ../../framework/io/CheckpointOutputStream.h registerTopologyExemplars.o: ../../framework/base/Molecule.h registerTopologyExemplars.o: ../../framework/topology/BankLennardJonesParameterTable.h registerTopologyExemplars.o: ../../framework/topology/topologyutilities.h registerTopologyExemplars.o: ../../framework/base/Matrix3by3.h registerTopologyExemplars.o: ../../framework/base/Stack.h registerTopologyExemplars.o: /usr/include/string.h registerTopologyExemplars.o: /usr/lib/gcc/i386-redhat-linux/3.4.6/include/stddef.h registerTopologyExemplars.o: ../../framework/topology/AngleInfo.h registerTopologyExemplars.o: ../../framework/topology/CellListEnumerator.h registerTopologyExemplars.o: ../../framework/topology/buildCellLists.h registerTopologyExemplars.o: ../../framework/frontend/TopologyFactory.h registerTopologyExemplars.o: ../../framework/frontend/TopologyFactoryDetails.h registerTopologyExemplars.o: ../../framework/frontend/Factory2.h registerTopologyExemplars.o: ../../framework/topology/VacuumBoundaryConditions.h registerTopologyExemplars.o: ../../framework/topology/CubicCellManager.h registerTopologyExemplars.o: ../../framework/topology/ArrayCellListStructure.h registerTopologyExemplars.o: ../../framework/topology/CubicCellLocation.h registerTopologyExemplars.o: ../../framework/base/Array.h registerTopologyExemplars.o: ../../framework/base/Array_Fastest.h registerTopologyExemplars.o: /usr/include/assert.h registerTopologyExemplars.o: ../../framework/topology/PeriodicBoundaryConditions.h registerTopologyExemplars.o: ../../framework/base/Vector.h