# Makefile.in generated by automake 1.9.2 from Makefile.am. # framework/integrators/Makefile. 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P_FRONTEND = $(top_srcdir)/framework/frontend P_FACTORIES = $(top_srcdir)/framework/factories # integrators Sources P_INTEGRATORS_SRC = \ BBKIntegrator.cpp\ BSplineMOLLYIntegrator.cpp\ CGMinimizerIntegrator.cpp\ DLMCIntegrator.cpp\ DMDLeapfrogIntegrator.cpp\ DihedralHMCIntegrator.cpp\ EquilibriumMOLLYIntegrator.cpp\ HMCIntegrator.cpp\ HessianInt.cpp \ ImpulseIntegrator.cpp\ Integrator.cpp\ IntegratorDefinition.cpp\ LangevinImpulseIntegrator.cpp\ LeapfrogIntegrator.cpp\ LeapfrogTruncatedShadow.cpp\ MCIntegrator.cpp\ MOLLYIntegrator.cpp\ MTSIntegrator.cpp\ ModifierMetaRattle.cpp\ ModifierMetaRattleShake.cpp\ ModifierMetaShake.cpp\ ModifierNPTRattle.cpp\ ModifierNPTShake.cpp\ ModifierNVTRattle.cpp\ ModifierNVTShake.cpp\ ModifierRattle.cpp\ ModifierShadow.cpp\ ModifierShake.cpp\ NPTVerletIntegrator.cpp\ NVTVerletIntegrator.cpp\ NormModeInt.cpp\ NormModeMin.cpp\ NormModeDiag.cpp\ NormModeVisual.cpp\ NoseNVTLeapfrogIntegrator.cpp\ PLeapfrogIntegrator.cpp\ PaulTrapIntegrator.cpp\ STSIntegrator.cpp\ ShadowHMCIntegrator.cpp\ StandardIntegrator.cpp\ Hessian.cpp # S2HMCIntegrator.cpp # integrators Includes P_INTEGRATORS_H = \ BBKIntegrator.h\ BSplineMOLLYIntegrator.h\ CGMinimizerIntegrator.h\ DLMCIntegrator.h\ DMDLeapfrogIntegrator.h\ DihedralHMCIntegrator.h\ EquilibriumMOLLYIntegrator.h\ HMCIntegrator.h\ HessianInt.h\ ImpulseIntegrator.h\ Integrator.h\ IntegratorDefinition.h\ LangevinImpulseIntegrator.h\ LeapfrogIntegrator.h\ LeapfrogTruncatedShadow.h\ MCIntegrator.h\ MOLLYIntegrator.h\ MTSIntegrator.h\ Modifier.h\ ModifierAveraging.h\ ModifierFriction.h\ ModifierIncrementTimestep.h\ ModifierMetaRattle.h\ ModifierMetaRattleShake.h\ ModifierMetaShake.h\ ModifierMollification.h\ ModifierNPTRattle.h\ ModifierNPTShake.h\ ModifierNVTRattle.h\ ModifierNVTShake.h\ ModifierPostForceBarostat.h\ ModifierPostForceThermostat.h\ ModifierPreForceBarostat.h\ ModifierPreForceThermostat.h\ ModifierRattle.h\ ModifierRemoveAngularMomentum.h\ ModifierRemoveLinearMomentum.h\ 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BSplineMOLLYIntegrator.o: ../../framework/base/ReducedHessAngle.h BSplineMOLLYIntegrator.o: ../../framework/base/Matrix3by3.h BSplineMOLLYIntegrator.o: ../../framework/base/reducedHessBond.h BSplineMOLLYIntegrator.o: ../../framework/forces/ForceGroup.h BSplineMOLLYIntegrator.o: ../../framework/forces/SystemForce.h BSplineMOLLYIntegrator.o: ../../framework/forces/Force.h BSplineMOLLYIntegrator.o: ../../framework/topology/GenericTopology.h BSplineMOLLYIntegrator.o: ../../framework/base/Atom.h BSplineMOLLYIntegrator.o: ../../framework/base/AtomType.h BSplineMOLLYIntegrator.o: ../../framework/topology/Angle.h BSplineMOLLYIntegrator.o: ../../framework/topology/Bond.h BSplineMOLLYIntegrator.o: ../../framework/topology/Torsion.h BSplineMOLLYIntegrator.o: ../../framework/topology/ExclusionTable.h BSplineMOLLYIntegrator.o: ../../framework/topology/ExclusionType.h BSplineMOLLYIntegrator.o: ../../framework/topology/LennardJonesParameterTable.h BSplineMOLLYIntegrator.o: ../../framework/topology/LennardJonesParameters.h BSplineMOLLYIntegrator.o: ../../framework/base/Molecule.h BSplineMOLLYIntegrator.o: ../../framework/topology/BankLennardJonesParameterTable.h CGMinimizerIntegrator.o: CGMinimizerIntegrator.h STSIntegrator.h CGMinimizerIntegrator.o: StandardIntegrator.h Integrator.h CGMinimizerIntegrator.o: ../../framework/base/Makeable.h CGMinimizerIntegrator.o: ../../framework/base/MakeableDefinition.h CGMinimizerIntegrator.o: ../../framework/base/Parameter.h CGMinimizerIntegrator.o: ../../framework/base/Value.h CGMinimizerIntegrator.o: ../../framework/base/ValueType.h CGMinimizerIntegrator.o: ../../framework/base/AbstractEnumType.h CGMinimizerIntegrator.o: ../../framework/base/stringutilities.h CGMinimizerIntegrator.o: ../../framework/base/Vector3D.h CGMinimizerIntegrator.o: ../../framework/base/mathutilities.h CGMinimizerIntegrator.o: ../../framework/base/pmconstants.h CGMinimizerIntegrator.o: ../../framework/base/Real.h CGMinimizerIntegrator.o: ../../framework/base/simpleTypes.h CGMinimizerIntegrator.o: /usr/include/math.h /usr/include/features.h CGMinimizerIntegrator.o: /usr/include/sys/cdefs.h /usr/include/gnu/stubs.h CGMinimizerIntegrator.o: /usr/include/bits/huge_val.h CGMinimizerIntegrator.o: /usr/include/bits/mathdef.h CGMinimizerIntegrator.o: /usr/include/bits/mathcalls.h CGMinimizerIntegrator.o: ../../framework/base/Report.h CGMinimizerIntegrator.o: ../../framework/base/ConstraintValueType.h CGMinimizerIntegrator.o: ../../framework/io/CheckpointInputStream.h CGMinimizerIntegrator.o: ../../framework/base/StateRestore.h CGMinimizerIntegrator.o: ../../framework/base/Vector3DBlock.h CGMinimizerIntegrator.o: ../../framework/base/Proxy.h CGMinimizerIntegrator.o: ../../framework/base/ScalarStructure.h CGMinimizerIntegrator.o: ../../framework/io/CheckpointOutputStream.h CGMinimizerIntegrator.o: IntegratorDefinition.h ../../framework/base/XSC.h CGMinimizerIntegrator.o: ../../framework/topology/GenericTopology.h CGMinimizerIntegrator.o: ../../framework/base/Atom.h CGMinimizerIntegrator.o: ../../framework/base/AtomType.h CGMinimizerIntegrator.o: ../../framework/topology/Angle.h CGMinimizerIntegrator.o: ../../framework/topology/Bond.h CGMinimizerIntegrator.o: ../../framework/topology/Torsion.h CGMinimizerIntegrator.o: ../../framework/topology/ExclusionTable.h CGMinimizerIntegrator.o: ../../framework/topology/ExclusionType.h CGMinimizerIntegrator.o: ../../framework/topology/LennardJonesParameterTable.h CGMinimizerIntegrator.o: ../../framework/topology/LennardJonesParameters.h CGMinimizerIntegrator.o: ../../framework/base/Molecule.h CGMinimizerIntegrator.o: ../../framework/topology/BankLennardJonesParameterTable.h CGMinimizerIntegrator.o: ../../framework/forces/ForceGroup.h CGMinimizerIntegrator.o: ../../framework/topology/topologyutilities.h CGMinimizerIntegrator.o: ../../framework/base/Matrix3by3.h CGMinimizerIntegrator.o: ../../framework/base/Stack.h /usr/include/string.h CGMinimizerIntegrator.o: /usr/lib/gcc/i386-redhat-linux/3.4.6/include/stddef.h CGMinimizerIntegrator.o: ../../framework/topology/AngleInfo.h DLMCIntegrator.o: DLMCIntegrator.h MCIntegrator.h MTSIntegrator.h DLMCIntegrator.o: StandardIntegrator.h Integrator.h DLMCIntegrator.o: ../../framework/base/Makeable.h DLMCIntegrator.o: ../../framework/base/MakeableDefinition.h DLMCIntegrator.o: ../../framework/base/Parameter.h DLMCIntegrator.o: ../../framework/base/Value.h DLMCIntegrator.o: ../../framework/base/ValueType.h DLMCIntegrator.o: ../../framework/base/AbstractEnumType.h DLMCIntegrator.o: ../../framework/base/stringutilities.h DLMCIntegrator.o: ../../framework/base/Vector3D.h DLMCIntegrator.o: ../../framework/base/mathutilities.h DLMCIntegrator.o: ../../framework/base/pmconstants.h DLMCIntegrator.o: ../../framework/base/Real.h DLMCIntegrator.o: ../../framework/base/simpleTypes.h /usr/include/math.h DLMCIntegrator.o: /usr/include/features.h /usr/include/sys/cdefs.h DLMCIntegrator.o: /usr/include/gnu/stubs.h /usr/include/bits/huge_val.h DLMCIntegrator.o: /usr/include/bits/mathdef.h /usr/include/bits/mathcalls.h DLMCIntegrator.o: ../../framework/base/Report.h DLMCIntegrator.o: ../../framework/base/ConstraintValueType.h DLMCIntegrator.o: ../../framework/io/CheckpointInputStream.h DLMCIntegrator.o: ../../framework/base/StateRestore.h DLMCIntegrator.o: ../../framework/base/Vector3DBlock.h DLMCIntegrator.o: ../../framework/base/Proxy.h DLMCIntegrator.o: ../../framework/base/ScalarStructure.h DLMCIntegrator.o: ../../framework/io/CheckpointOutputStream.h DLMCIntegrator.o: IntegratorDefinition.h ../../framework/base/XSC.h DLMCIntegrator.o: ../../framework/topology/topologyutilities.h DLMCIntegrator.o: ../../framework/base/Matrix3by3.h DLMCIntegrator.o: ../../framework/topology/Torsion.h DLMCIntegrator.o: ../../framework/base/Stack.h /usr/include/string.h DLMCIntegrator.o: /usr/lib/gcc/i386-redhat-linux/3.4.6/include/stddef.h DLMCIntegrator.o: ../../framework/topology/AngleInfo.h DLMCIntegrator.o: ../../framework/topology/Bond.h DLMCIntegrator.o: ../../framework/forces/ForceGroup.h DLMCIntegrator.o: ../../framework/forces/Force.h DMDLeapfrogIntegrator.o: DMDLeapfrogIntegrator.h STSIntegrator.h DMDLeapfrogIntegrator.o: StandardIntegrator.h Integrator.h DMDLeapfrogIntegrator.o: ../../framework/base/Makeable.h DMDLeapfrogIntegrator.o: ../../framework/base/MakeableDefinition.h DMDLeapfrogIntegrator.o: ../../framework/base/Parameter.h DMDLeapfrogIntegrator.o: ../../framework/base/Value.h DMDLeapfrogIntegrator.o: ../../framework/base/ValueType.h DMDLeapfrogIntegrator.o: ../../framework/base/AbstractEnumType.h DMDLeapfrogIntegrator.o: ../../framework/base/stringutilities.h DMDLeapfrogIntegrator.o: ../../framework/base/Vector3D.h DMDLeapfrogIntegrator.o: ../../framework/base/mathutilities.h DMDLeapfrogIntegrator.o: ../../framework/base/pmconstants.h DMDLeapfrogIntegrator.o: ../../framework/base/Real.h DMDLeapfrogIntegrator.o: ../../framework/base/simpleTypes.h DMDLeapfrogIntegrator.o: /usr/include/math.h /usr/include/features.h DMDLeapfrogIntegrator.o: /usr/include/sys/cdefs.h /usr/include/gnu/stubs.h DMDLeapfrogIntegrator.o: /usr/include/bits/huge_val.h DMDLeapfrogIntegrator.o: /usr/include/bits/mathdef.h DMDLeapfrogIntegrator.o: /usr/include/bits/mathcalls.h DMDLeapfrogIntegrator.o: ../../framework/base/Report.h DMDLeapfrogIntegrator.o: ../../framework/base/ConstraintValueType.h DMDLeapfrogIntegrator.o: ../../framework/io/CheckpointInputStream.h DMDLeapfrogIntegrator.o: ../../framework/base/StateRestore.h DMDLeapfrogIntegrator.o: ../../framework/base/Vector3DBlock.h DMDLeapfrogIntegrator.o: ../../framework/base/Proxy.h DMDLeapfrogIntegrator.o: ../../framework/base/ScalarStructure.h DMDLeapfrogIntegrator.o: ../../framework/io/CheckpointOutputStream.h DMDLeapfrogIntegrator.o: IntegratorDefinition.h ../../framework/base/XSC.h DMDLeapfrogIntegrator.o: ../../framework/topology/GenericTopology.h DMDLeapfrogIntegrator.o: ../../framework/base/Atom.h DMDLeapfrogIntegrator.o: ../../framework/base/AtomType.h DMDLeapfrogIntegrator.o: ../../framework/topology/Angle.h DMDLeapfrogIntegrator.o: ../../framework/topology/Bond.h DMDLeapfrogIntegrator.o: ../../framework/topology/Torsion.h DMDLeapfrogIntegrator.o: ../../framework/topology/ExclusionTable.h DMDLeapfrogIntegrator.o: ../../framework/topology/ExclusionType.h DMDLeapfrogIntegrator.o: ../../framework/topology/LennardJonesParameterTable.h DMDLeapfrogIntegrator.o: ../../framework/topology/LennardJonesParameters.h DMDLeapfrogIntegrator.o: ../../framework/base/Molecule.h DMDLeapfrogIntegrator.o: ../../framework/topology/BankLennardJonesParameterTable.h DMDLeapfrogIntegrator.o: ../../framework/forces/ForceGroup.h DMDLeapfrogIntegrator.o: ../../framework/topology/topologyutilities.h DMDLeapfrogIntegrator.o: ../../framework/base/Matrix3by3.h DMDLeapfrogIntegrator.o: ../../framework/base/Stack.h /usr/include/string.h DMDLeapfrogIntegrator.o: /usr/lib/gcc/i386-redhat-linux/3.4.6/include/stddef.h DMDLeapfrogIntegrator.o: ../../framework/topology/AngleInfo.h DihedralHMCIntegrator.o: DihedralHMCIntegrator.h MTSIntegrator.h DihedralHMCIntegrator.o: StandardIntegrator.h Integrator.h DihedralHMCIntegrator.o: ../../framework/base/Makeable.h DihedralHMCIntegrator.o: ../../framework/base/MakeableDefinition.h DihedralHMCIntegrator.o: ../../framework/base/Parameter.h DihedralHMCIntegrator.o: ../../framework/base/Value.h DihedralHMCIntegrator.o: ../../framework/base/ValueType.h DihedralHMCIntegrator.o: ../../framework/base/AbstractEnumType.h DihedralHMCIntegrator.o: ../../framework/base/stringutilities.h DihedralHMCIntegrator.o: ../../framework/base/Vector3D.h DihedralHMCIntegrator.o: ../../framework/base/mathutilities.h DihedralHMCIntegrator.o: ../../framework/base/pmconstants.h DihedralHMCIntegrator.o: ../../framework/base/Real.h DihedralHMCIntegrator.o: ../../framework/base/simpleTypes.h DihedralHMCIntegrator.o: /usr/include/math.h /usr/include/features.h DihedralHMCIntegrator.o: /usr/include/sys/cdefs.h /usr/include/gnu/stubs.h DihedralHMCIntegrator.o: /usr/include/bits/huge_val.h DihedralHMCIntegrator.o: /usr/include/bits/mathdef.h DihedralHMCIntegrator.o: /usr/include/bits/mathcalls.h DihedralHMCIntegrator.o: ../../framework/base/Report.h DihedralHMCIntegrator.o: ../../framework/base/ConstraintValueType.h DihedralHMCIntegrator.o: ../../framework/io/CheckpointInputStream.h DihedralHMCIntegrator.o: ../../framework/base/StateRestore.h DihedralHMCIntegrator.o: ../../framework/base/Vector3DBlock.h DihedralHMCIntegrator.o: ../../framework/base/Proxy.h DihedralHMCIntegrator.o: ../../framework/base/ScalarStructure.h DihedralHMCIntegrator.o: ../../framework/io/CheckpointOutputStream.h DihedralHMCIntegrator.o: IntegratorDefinition.h ../../framework/base/XSC.h DihedralHMCIntegrator.o: ../../framework/topology/topologyutilities.h DihedralHMCIntegrator.o: ../../framework/base/Matrix3by3.h DihedralHMCIntegrator.o: ../../framework/topology/Torsion.h DihedralHMCIntegrator.o: ../../framework/base/Stack.h /usr/include/string.h DihedralHMCIntegrator.o: /usr/lib/gcc/i386-redhat-linux/3.4.6/include/stddef.h DihedralHMCIntegrator.o: ../../framework/topology/AngleInfo.h DihedralHMCIntegrator.o: ../../framework/topology/Bond.h DihedralHMCIntegrator.o: ../../framework/topology/Topology.h DihedralHMCIntegrator.o: ../../framework/topology/SemiGenericTopology.h DihedralHMCIntegrator.o: ../../framework/topology/GenericTopology.h DihedralHMCIntegrator.o: ../../framework/base/Atom.h DihedralHMCIntegrator.o: ../../framework/base/AtomType.h DihedralHMCIntegrator.o: ../../framework/topology/Angle.h DihedralHMCIntegrator.o: ../../framework/topology/ExclusionTable.h DihedralHMCIntegrator.o: ../../framework/topology/ExclusionType.h DihedralHMCIntegrator.o: ../../framework/topology/LennardJonesParameterTable.h DihedralHMCIntegrator.o: ../../framework/topology/LennardJonesParameters.h DihedralHMCIntegrator.o: ../../framework/base/Molecule.h DihedralHMCIntegrator.o: ../../framework/topology/BankLennardJonesParameterTable.h DihedralHMCIntegrator.o: ../../framework/topology/CellListEnumerator.h DihedralHMCIntegrator.o: ../../framework/topology/buildCellLists.h EquilibriumMOLLYIntegrator.o: EquilibriumMOLLYIntegrator.h MOLLYIntegrator.h EquilibriumMOLLYIntegrator.o: MTSIntegrator.h StandardIntegrator.h EquilibriumMOLLYIntegrator.o: Integrator.h ../../framework/base/Makeable.h EquilibriumMOLLYIntegrator.o: ../../framework/base/MakeableDefinition.h EquilibriumMOLLYIntegrator.o: ../../framework/base/Parameter.h EquilibriumMOLLYIntegrator.o: ../../framework/base/Value.h EquilibriumMOLLYIntegrator.o: ../../framework/base/ValueType.h EquilibriumMOLLYIntegrator.o: ../../framework/base/AbstractEnumType.h EquilibriumMOLLYIntegrator.o: ../../framework/base/stringutilities.h EquilibriumMOLLYIntegrator.o: ../../framework/base/Vector3D.h EquilibriumMOLLYIntegrator.o: ../../framework/base/mathutilities.h EquilibriumMOLLYIntegrator.o: ../../framework/base/pmconstants.h EquilibriumMOLLYIntegrator.o: ../../framework/base/Real.h EquilibriumMOLLYIntegrator.o: ../../framework/base/simpleTypes.h EquilibriumMOLLYIntegrator.o: /usr/include/math.h /usr/include/features.h EquilibriumMOLLYIntegrator.o: /usr/include/sys/cdefs.h EquilibriumMOLLYIntegrator.o: /usr/include/gnu/stubs.h EquilibriumMOLLYIntegrator.o: /usr/include/bits/huge_val.h EquilibriumMOLLYIntegrator.o: /usr/include/bits/mathdef.h EquilibriumMOLLYIntegrator.o: /usr/include/bits/mathcalls.h EquilibriumMOLLYIntegrator.o: ../../framework/base/Report.h EquilibriumMOLLYIntegrator.o: ../../framework/base/ConstraintValueType.h EquilibriumMOLLYIntegrator.o: ../../framework/io/CheckpointInputStream.h EquilibriumMOLLYIntegrator.o: ../../framework/base/StateRestore.h EquilibriumMOLLYIntegrator.o: ../../framework/base/Vector3DBlock.h EquilibriumMOLLYIntegrator.o: ../../framework/base/Proxy.h EquilibriumMOLLYIntegrator.o: ../../framework/base/ScalarStructure.h EquilibriumMOLLYIntegrator.o: ../../framework/io/CheckpointOutputStream.h EquilibriumMOLLYIntegrator.o: IntegratorDefinition.h EquilibriumMOLLYIntegrator.o: ../../framework/base/XSC.h EquilibriumMOLLYIntegrator.o: ../../framework/topology/Topology.h EquilibriumMOLLYIntegrator.o: ../../framework/topology/SemiGenericTopology.h EquilibriumMOLLYIntegrator.o: ../../framework/topology/GenericTopology.h EquilibriumMOLLYIntegrator.o: ../../framework/base/Atom.h EquilibriumMOLLYIntegrator.o: ../../framework/base/AtomType.h EquilibriumMOLLYIntegrator.o: ../../framework/topology/Angle.h EquilibriumMOLLYIntegrator.o: ../../framework/topology/Bond.h EquilibriumMOLLYIntegrator.o: ../../framework/topology/Torsion.h EquilibriumMOLLYIntegrator.o: ../../framework/topology/ExclusionTable.h EquilibriumMOLLYIntegrator.o: ../../framework/topology/ExclusionType.h EquilibriumMOLLYIntegrator.o: ../../framework/topology/LennardJonesParameterTable.h EquilibriumMOLLYIntegrator.o: ../../framework/topology/LennardJonesParameters.h EquilibriumMOLLYIntegrator.o: ../../framework/base/Molecule.h EquilibriumMOLLYIntegrator.o: ../../framework/topology/BankLennardJonesParameterTable.h EquilibriumMOLLYIntegrator.o: ../../framework/topology/topologyutilities.h EquilibriumMOLLYIntegrator.o: ../../framework/base/Matrix3by3.h EquilibriumMOLLYIntegrator.o: ../../framework/base/Stack.h EquilibriumMOLLYIntegrator.o: /usr/include/string.h EquilibriumMOLLYIntegrator.o: /usr/lib/gcc/i386-redhat-linux/3.4.6/include/stddef.h EquilibriumMOLLYIntegrator.o: ../../framework/topology/AngleInfo.h EquilibriumMOLLYIntegrator.o: ../../framework/topology/CellListEnumerator.h EquilibriumMOLLYIntegrator.o: ../../framework/topology/buildCellLists.h HMCIntegrator.o: HMCIntegrator.h MCIntegrator.h MTSIntegrator.h HMCIntegrator.o: StandardIntegrator.h Integrator.h HMCIntegrator.o: ../../framework/base/Makeable.h HMCIntegrator.o: ../../framework/base/MakeableDefinition.h HMCIntegrator.o: ../../framework/base/Parameter.h HMCIntegrator.o: ../../framework/base/Value.h HMCIntegrator.o: ../../framework/base/ValueType.h HMCIntegrator.o: ../../framework/base/AbstractEnumType.h HMCIntegrator.o: ../../framework/base/stringutilities.h HMCIntegrator.o: ../../framework/base/Vector3D.h HMCIntegrator.o: ../../framework/base/mathutilities.h HMCIntegrator.o: ../../framework/base/pmconstants.h HMCIntegrator.o: ../../framework/base/Real.h HMCIntegrator.o: ../../framework/base/simpleTypes.h /usr/include/math.h HMCIntegrator.o: /usr/include/features.h /usr/include/sys/cdefs.h HMCIntegrator.o: /usr/include/gnu/stubs.h /usr/include/bits/huge_val.h HMCIntegrator.o: /usr/include/bits/mathdef.h /usr/include/bits/mathcalls.h HMCIntegrator.o: ../../framework/base/Report.h HMCIntegrator.o: ../../framework/base/ConstraintValueType.h HMCIntegrator.o: ../../framework/io/CheckpointInputStream.h HMCIntegrator.o: ../../framework/base/StateRestore.h HMCIntegrator.o: ../../framework/base/Vector3DBlock.h HMCIntegrator.o: ../../framework/base/Proxy.h HMCIntegrator.o: ../../framework/base/ScalarStructure.h HMCIntegrator.o: ../../framework/io/CheckpointOutputStream.h HMCIntegrator.o: IntegratorDefinition.h ../../framework/base/XSC.h HMCIntegrator.o: ../../framework/topology/topologyutilities.h HMCIntegrator.o: ../../framework/base/Matrix3by3.h HMCIntegrator.o: ../../framework/topology/Torsion.h HMCIntegrator.o: ../../framework/base/Stack.h /usr/include/string.h HMCIntegrator.o: /usr/lib/gcc/i386-redhat-linux/3.4.6/include/stddef.h HMCIntegrator.o: ../../framework/topology/AngleInfo.h HMCIntegrator.o: ../../framework/topology/Bond.h HessianInt.o: HessianInt.h STSIntegrator.h StandardIntegrator.h Integrator.h HessianInt.o: ../../framework/base/Makeable.h HessianInt.o: ../../framework/base/MakeableDefinition.h HessianInt.o: ../../framework/base/Parameter.h ../../framework/base/Value.h HessianInt.o: ../../framework/base/ValueType.h HessianInt.o: ../../framework/base/AbstractEnumType.h HessianInt.o: ../../framework/base/stringutilities.h HessianInt.o: ../../framework/base/Vector3D.h HessianInt.o: ../../framework/base/mathutilities.h HessianInt.o: ../../framework/base/pmconstants.h ../../framework/base/Real.h HessianInt.o: ../../framework/base/simpleTypes.h /usr/include/math.h HessianInt.o: /usr/include/features.h /usr/include/sys/cdefs.h HessianInt.o: /usr/include/gnu/stubs.h /usr/include/bits/huge_val.h HessianInt.o: /usr/include/bits/mathdef.h /usr/include/bits/mathcalls.h HessianInt.o: ../../framework/base/Report.h HessianInt.o: ../../framework/base/ConstraintValueType.h HessianInt.o: ../../framework/io/CheckpointInputStream.h HessianInt.o: ../../framework/base/StateRestore.h HessianInt.o: ../../framework/base/Vector3DBlock.h HessianInt.o: ../../framework/base/Proxy.h HessianInt.o: ../../framework/base/ScalarStructure.h HessianInt.o: ../../framework/io/CheckpointOutputStream.h HessianInt.o: IntegratorDefinition.h ../../framework/base/XSC.h HessianInt.o: ../../framework/topology/GenericTopology.h HessianInt.o: ../../framework/base/Atom.h ../../framework/base/AtomType.h HessianInt.o: ../../framework/topology/Angle.h HessianInt.o: ../../framework/topology/Bond.h HessianInt.o: ../../framework/topology/Torsion.h HessianInt.o: ../../framework/topology/ExclusionTable.h HessianInt.o: ../../framework/topology/ExclusionType.h HessianInt.o: ../../framework/topology/LennardJonesParameterTable.h HessianInt.o: ../../framework/topology/LennardJonesParameters.h HessianInt.o: ../../framework/base/Molecule.h HessianInt.o: ../../framework/topology/BankLennardJonesParameterTable.h HessianInt.o: ../../framework/forces/Force.h Hessian.h HessianInt.o: ../../framework/base/typeSelection.h HessianInt.o: ../../framework/forces/ForceGroup.h HessianInt.o: ../../framework/topology/topologyutilities.h HessianInt.o: ../../framework/base/Matrix3by3.h ../../framework/base/Stack.h HessianInt.o: /usr/include/string.h HessianInt.o: /usr/lib/gcc/i386-redhat-linux/3.4.6/include/stddef.h HessianInt.o: ../../framework/topology/AngleInfo.h HessianInt.o: ../../framework/base/systemutilities.h /usr/include/stdio.h HessianInt.o: /usr/include/bits/types.h /usr/include/bits/wordsize.h HessianInt.o: /usr/include/bits/typesizes.h /usr/include/libio.h HessianInt.o: /usr/include/_G_config.h /usr/include/wchar.h HessianInt.o: /usr/include/bits/wchar.h /usr/include/gconv.h HessianInt.o: /usr/lib/gcc/i386-redhat-linux/3.4.6/include/stdarg.h HessianInt.o: /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h HessianInt.o: /afs/nd.edu/user25/tcickovs/Research/LAPACK/include/SimTKlapack.h ImpulseIntegrator.o: ImpulseIntegrator.h MTSIntegrator.h StandardIntegrator.h ImpulseIntegrator.o: Integrator.h ../../framework/base/Makeable.h ImpulseIntegrator.o: ../../framework/base/MakeableDefinition.h ImpulseIntegrator.o: 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Integrator.o: /usr/include/gnu/stubs.h /usr/include/bits/huge_val.h Integrator.o: /usr/include/bits/mathdef.h /usr/include/bits/mathcalls.h Integrator.o: ../../framework/base/Report.h Integrator.o: ../../framework/base/ConstraintValueType.h Integrator.o: ../../framework/io/CheckpointInputStream.h Integrator.o: ../../framework/base/StateRestore.h Integrator.o: ../../framework/base/Vector3DBlock.h Integrator.o: ../../framework/base/Proxy.h Integrator.o: ../../framework/base/ScalarStructure.h Integrator.o: ../../framework/io/CheckpointOutputStream.h Integrator.o: IntegratorDefinition.h ../../framework/base/XSC.h Integrator.o: ../../framework/forces/ForceGroup.h Integrator.o: ../../framework/topology/GenericTopology.h Integrator.o: ../../framework/base/Atom.h ../../framework/base/AtomType.h Integrator.o: ../../framework/topology/Angle.h Integrator.o: ../../framework/topology/Bond.h Integrator.o: ../../framework/topology/Torsion.h Integrator.o: ../../framework/topology/ExclusionTable.h Integrator.o: ../../framework/topology/ExclusionType.h Integrator.o: ../../framework/topology/LennardJonesParameterTable.h Integrator.o: ../../framework/topology/LennardJonesParameters.h Integrator.o: ../../framework/base/Molecule.h Integrator.o: ../../framework/topology/BankLennardJonesParameterTable.h Integrator.o: ../../framework/topology/topologyutilities.h Integrator.o: ../../framework/base/Matrix3by3.h ../../framework/base/Stack.h Integrator.o: /usr/include/string.h Integrator.o: /usr/lib/gcc/i386-redhat-linux/3.4.6/include/stddef.h Integrator.o: ../../framework/topology/AngleInfo.h ModifierShake.h Integrator.o: ModifierMetaShake.h ModifierMetaRattleShake.h Modifier.h Integrator.o: ModifierRattle.h ModifierMetaRattle.h ModifierShadow.h IntegratorDefinition.o: IntegratorDefinition.h IntegratorDefinition.o: ../../framework/base/MakeableDefinition.h IntegratorDefinition.o: ../../framework/base/Parameter.h IntegratorDefinition.o: ../../framework/base/Value.h IntegratorDefinition.o: 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IntegratorDefinition.o: ../../framework/io/CheckpointInputStream.h IntegratorDefinition.o: ../../framework/base/StateRestore.h IntegratorDefinition.o: ../../framework/base/Vector3DBlock.h IntegratorDefinition.o: ../../framework/base/Proxy.h IntegratorDefinition.o: ../../framework/base/ScalarStructure.h IntegratorDefinition.o: ../../framework/io/CheckpointOutputStream.h LangevinImpulseIntegrator.o: LangevinImpulseIntegrator.h STSIntegrator.h LangevinImpulseIntegrator.o: StandardIntegrator.h Integrator.h LangevinImpulseIntegrator.o: ../../framework/base/Makeable.h LangevinImpulseIntegrator.o: ../../framework/base/MakeableDefinition.h LangevinImpulseIntegrator.o: ../../framework/base/Parameter.h LangevinImpulseIntegrator.o: ../../framework/base/Value.h LangevinImpulseIntegrator.o: ../../framework/base/ValueType.h LangevinImpulseIntegrator.o: ../../framework/base/AbstractEnumType.h LangevinImpulseIntegrator.o: ../../framework/base/stringutilities.h LangevinImpulseIntegrator.o: 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../../framework/base/Proxy.h LangevinImpulseIntegrator.o: ../../framework/base/ScalarStructure.h LangevinImpulseIntegrator.o: ../../framework/io/CheckpointOutputStream.h LangevinImpulseIntegrator.o: IntegratorDefinition.h LangevinImpulseIntegrator.o: ../../framework/base/XSC.h LangevinImpulseIntegrator.o: ../../framework/topology/GenericTopology.h LangevinImpulseIntegrator.o: ../../framework/base/Atom.h LangevinImpulseIntegrator.o: ../../framework/base/AtomType.h LangevinImpulseIntegrator.o: ../../framework/topology/Angle.h LangevinImpulseIntegrator.o: ../../framework/topology/Bond.h LangevinImpulseIntegrator.o: ../../framework/topology/Torsion.h LangevinImpulseIntegrator.o: ../../framework/topology/ExclusionTable.h LangevinImpulseIntegrator.o: ../../framework/topology/ExclusionType.h LangevinImpulseIntegrator.o: ../../framework/topology/LennardJonesParameterTable.h LangevinImpulseIntegrator.o: ../../framework/topology/LennardJonesParameters.h LangevinImpulseIntegrator.o: 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LeapfrogIntegrator.o: ../../framework/base/ScalarStructure.h LeapfrogIntegrator.o: ../../framework/io/CheckpointOutputStream.h LeapfrogIntegrator.o: IntegratorDefinition.h ../../framework/base/XSC.h LeapfrogIntegrator.o: ../../framework/topology/GenericTopology.h LeapfrogIntegrator.o: ../../framework/base/Atom.h LeapfrogIntegrator.o: ../../framework/base/AtomType.h LeapfrogIntegrator.o: ../../framework/topology/Angle.h LeapfrogIntegrator.o: ../../framework/topology/Bond.h LeapfrogIntegrator.o: ../../framework/topology/Torsion.h LeapfrogIntegrator.o: ../../framework/topology/ExclusionTable.h LeapfrogIntegrator.o: ../../framework/topology/ExclusionType.h LeapfrogIntegrator.o: ../../framework/topology/LennardJonesParameterTable.h LeapfrogIntegrator.o: ../../framework/topology/LennardJonesParameters.h LeapfrogIntegrator.o: ../../framework/base/Molecule.h LeapfrogIntegrator.o: ../../framework/topology/BankLennardJonesParameterTable.h LeapfrogIntegrator.o: ../../framework/forces/ForceGroup.h LeapfrogIntegrator.o: ../../framework/topology/topologyutilities.h LeapfrogIntegrator.o: ../../framework/base/Matrix3by3.h LeapfrogIntegrator.o: ../../framework/base/Stack.h /usr/include/string.h LeapfrogIntegrator.o: /usr/lib/gcc/i386-redhat-linux/3.4.6/include/stddef.h LeapfrogIntegrator.o: ../../framework/topology/AngleInfo.h LeapfrogTruncatedShadow.o: LeapfrogTruncatedShadow.h STSIntegrator.h LeapfrogTruncatedShadow.o: StandardIntegrator.h Integrator.h LeapfrogTruncatedShadow.o: ../../framework/base/Makeable.h LeapfrogTruncatedShadow.o: ../../framework/base/MakeableDefinition.h LeapfrogTruncatedShadow.o: ../../framework/base/Parameter.h LeapfrogTruncatedShadow.o: ../../framework/base/Value.h LeapfrogTruncatedShadow.o: ../../framework/base/ValueType.h LeapfrogTruncatedShadow.o: ../../framework/base/AbstractEnumType.h LeapfrogTruncatedShadow.o: ../../framework/base/stringutilities.h LeapfrogTruncatedShadow.o: ../../framework/base/Vector3D.h LeapfrogTruncatedShadow.o: 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LeapfrogTruncatedShadow.o: ../../framework/io/CheckpointOutputStream.h LeapfrogTruncatedShadow.o: IntegratorDefinition.h ../../framework/base/XSC.h LeapfrogTruncatedShadow.o: ../../framework/topology/GenericTopology.h LeapfrogTruncatedShadow.o: ../../framework/base/Atom.h LeapfrogTruncatedShadow.o: ../../framework/base/AtomType.h LeapfrogTruncatedShadow.o: ../../framework/topology/Angle.h LeapfrogTruncatedShadow.o: ../../framework/topology/Bond.h LeapfrogTruncatedShadow.o: ../../framework/topology/Torsion.h LeapfrogTruncatedShadow.o: ../../framework/topology/ExclusionTable.h LeapfrogTruncatedShadow.o: ../../framework/topology/ExclusionType.h LeapfrogTruncatedShadow.o: ../../framework/topology/LennardJonesParameterTable.h LeapfrogTruncatedShadow.o: ../../framework/topology/LennardJonesParameters.h LeapfrogTruncatedShadow.o: ../../framework/base/Molecule.h LeapfrogTruncatedShadow.o: ../../framework/topology/BankLennardJonesParameterTable.h LeapfrogTruncatedShadow.o: 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../../framework/forces/CoulombForceDiElec.h LeapfrogTruncatedShadow.o: ../../framework/topology/CnSwitchingFunction.h LeapfrogTruncatedShadow.o: ../../framework/topology/CnSwitchingFunctionBase.h LeapfrogTruncatedShadow.o: ../../framework/topology/C2SwitchingFunction.h LeapfrogTruncatedShadow.o: ../../framework/topology/C2SwitchingFunctionBase.h LeapfrogTruncatedShadow.o: ../../framework/topology/C1SwitchingFunction.h LeapfrogTruncatedShadow.o: ../../framework/topology/C1SwitchingFunctionBase.h MCIntegrator.o: MCIntegrator.h MTSIntegrator.h StandardIntegrator.h MCIntegrator.o: Integrator.h ../../framework/base/Makeable.h MCIntegrator.o: ../../framework/base/MakeableDefinition.h MCIntegrator.o: ../../framework/base/Parameter.h ../../framework/base/Value.h MCIntegrator.o: ../../framework/base/ValueType.h MCIntegrator.o: ../../framework/base/AbstractEnumType.h MCIntegrator.o: ../../framework/base/stringutilities.h MCIntegrator.o: ../../framework/base/Vector3D.h MCIntegrator.o: 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../../framework/base/Atom.h ../../framework/base/AtomType.h MCIntegrator.o: ../../framework/topology/Angle.h MCIntegrator.o: ../../framework/topology/Bond.h MCIntegrator.o: ../../framework/topology/Torsion.h MCIntegrator.o: ../../framework/topology/ExclusionTable.h MCIntegrator.o: ../../framework/topology/ExclusionType.h MCIntegrator.o: ../../framework/topology/LennardJonesParameterTable.h MCIntegrator.o: ../../framework/topology/LennardJonesParameters.h MCIntegrator.o: ../../framework/base/Molecule.h MCIntegrator.o: ../../framework/topology/BankLennardJonesParameterTable.h MCIntegrator.o: ../../framework/topology/topologyutilities.h MCIntegrator.o: ../../framework/base/Matrix3by3.h MCIntegrator.o: ../../framework/base/Stack.h /usr/include/string.h MCIntegrator.o: /usr/lib/gcc/i386-redhat-linux/3.4.6/include/stddef.h MCIntegrator.o: ../../framework/topology/AngleInfo.h MCIntegrator.o: ../../framework/forces/ForceGroup.h MOLLYIntegrator.o: MOLLYIntegrator.h MTSIntegrator.h 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../../framework/base/ConstraintValueType.h MOLLYIntegrator.o: ../../framework/io/CheckpointInputStream.h MOLLYIntegrator.o: ../../framework/base/StateRestore.h MOLLYIntegrator.o: ../../framework/base/Vector3DBlock.h MOLLYIntegrator.o: ../../framework/base/Proxy.h MOLLYIntegrator.o: ../../framework/base/ScalarStructure.h MOLLYIntegrator.o: ../../framework/io/CheckpointOutputStream.h MOLLYIntegrator.o: IntegratorDefinition.h ../../framework/base/XSC.h MOLLYIntegrator.o: ModifierAveraging.h Modifier.h MOLLYIntegrator.o: ../../framework/topology/GenericTopology.h MOLLYIntegrator.o: ../../framework/base/Atom.h MOLLYIntegrator.o: ../../framework/base/AtomType.h MOLLYIntegrator.o: ../../framework/topology/Angle.h MOLLYIntegrator.o: ../../framework/topology/Bond.h MOLLYIntegrator.o: ../../framework/topology/Torsion.h MOLLYIntegrator.o: ../../framework/topology/ExclusionTable.h MOLLYIntegrator.o: ../../framework/topology/ExclusionType.h MOLLYIntegrator.o: ../../framework/topology/LennardJonesParameterTable.h MOLLYIntegrator.o: ../../framework/topology/LennardJonesParameters.h MOLLYIntegrator.o: ../../framework/base/Molecule.h MOLLYIntegrator.o: ../../framework/topology/BankLennardJonesParameterTable.h MOLLYIntegrator.o: ModifierMollification.h MTSIntegrator.o: MTSIntegrator.h StandardIntegrator.h Integrator.h MTSIntegrator.o: ../../framework/base/Makeable.h MTSIntegrator.o: ../../framework/base/MakeableDefinition.h MTSIntegrator.o: ../../framework/base/Parameter.h MTSIntegrator.o: ../../framework/base/Value.h MTSIntegrator.o: ../../framework/base/ValueType.h MTSIntegrator.o: ../../framework/base/AbstractEnumType.h MTSIntegrator.o: ../../framework/base/stringutilities.h MTSIntegrator.o: ../../framework/base/Vector3D.h MTSIntegrator.o: ../../framework/base/mathutilities.h MTSIntegrator.o: ../../framework/base/pmconstants.h MTSIntegrator.o: ../../framework/base/Real.h MTSIntegrator.o: ../../framework/base/simpleTypes.h /usr/include/math.h MTSIntegrator.o: /usr/include/features.h /usr/include/sys/cdefs.h MTSIntegrator.o: /usr/include/gnu/stubs.h /usr/include/bits/huge_val.h MTSIntegrator.o: /usr/include/bits/mathdef.h /usr/include/bits/mathcalls.h MTSIntegrator.o: ../../framework/base/Report.h MTSIntegrator.o: ../../framework/base/ConstraintValueType.h MTSIntegrator.o: ../../framework/io/CheckpointInputStream.h MTSIntegrator.o: ../../framework/base/StateRestore.h MTSIntegrator.o: ../../framework/base/Vector3DBlock.h MTSIntegrator.o: ../../framework/base/Proxy.h MTSIntegrator.o: ../../framework/base/ScalarStructure.h MTSIntegrator.o: ../../framework/io/CheckpointOutputStream.h MTSIntegrator.o: IntegratorDefinition.h ../../framework/base/XSC.h MTSIntegrator.o: ../../framework/forces/ForceGroup.h MTSIntegrator.o: ../../framework/topology/GenericTopology.h MTSIntegrator.o: ../../framework/base/Atom.h ../../framework/base/AtomType.h MTSIntegrator.o: ../../framework/topology/Angle.h MTSIntegrator.o: ../../framework/topology/Bond.h MTSIntegrator.o: ../../framework/topology/Torsion.h MTSIntegrator.o: ../../framework/topology/ExclusionTable.h MTSIntegrator.o: ../../framework/topology/ExclusionType.h MTSIntegrator.o: ../../framework/topology/LennardJonesParameterTable.h MTSIntegrator.o: ../../framework/topology/LennardJonesParameters.h MTSIntegrator.o: ../../framework/base/Molecule.h MTSIntegrator.o: ../../framework/topology/BankLennardJonesParameterTable.h ModifierMetaRattle.o: ModifierMetaRattle.h ModifierMetaRattleShake.h ModifierMetaRattle.o: Modifier.h ../../framework/base/Report.h ModifierMetaRattle.o: ../../framework/topology/GenericTopology.h ModifierMetaRattle.o: ../../framework/base/Atom.h ../../framework/base/Real.h ModifierMetaRattle.o: ../../framework/base/AtomType.h ModifierMetaRattle.o: ../../framework/topology/Angle.h ModifierMetaRattle.o: ../../framework/topology/Bond.h ModifierMetaRattle.o: ../../framework/topology/Torsion.h ModifierMetaRattle.o: ../../framework/topology/ExclusionTable.h ModifierMetaRattle.o: ../../framework/base/pmconstants.h ModifierMetaRattle.o: ../../framework/base/simpleTypes.h ModifierMetaRattle.o: ../../framework/topology/ExclusionType.h ModifierMetaRattle.o: ../../framework/base/AbstractEnumType.h ModifierMetaRattle.o: ../../framework/base/stringutilities.h ModifierMetaRattle.o: ../../framework/base/Vector3D.h ModifierMetaRattle.o: ../../framework/base/mathutilities.h ModifierMetaRattle.o: /usr/include/math.h /usr/include/features.h ModifierMetaRattle.o: /usr/include/sys/cdefs.h /usr/include/gnu/stubs.h ModifierMetaRattle.o: /usr/include/bits/huge_val.h ModifierMetaRattle.o: /usr/include/bits/mathdef.h ModifierMetaRattle.o: /usr/include/bits/mathcalls.h ModifierMetaRattle.o: ../../framework/topology/LennardJonesParameterTable.h ModifierMetaRattle.o: ../../framework/topology/LennardJonesParameters.h ModifierMetaRattle.o: ../../framework/base/Vector3DBlock.h ModifierMetaRattle.o: ../../framework/base/Proxy.h ModifierMetaRattle.o: ../../framework/base/Makeable.h ModifierMetaRattle.o: ../../framework/base/MakeableDefinition.h ModifierMetaRattle.o: ../../framework/base/Parameter.h ModifierMetaRattle.o: ../../framework/base/Value.h ModifierMetaRattle.o: ../../framework/base/ValueType.h ModifierMetaRattle.o: ../../framework/base/ConstraintValueType.h ModifierMetaRattle.o: ../../framework/io/CheckpointInputStream.h ModifierMetaRattle.o: ../../framework/base/StateRestore.h ModifierMetaRattle.o: ../../framework/base/ScalarStructure.h ModifierMetaRattle.o: ../../framework/io/CheckpointOutputStream.h ModifierMetaRattle.o: ../../framework/base/Molecule.h ModifierMetaRattle.o: ../../framework/topology/BankLennardJonesParameterTable.h ModifierMetaRattle.o: ../../framework/topology/Topology.h ModifierMetaRattle.o: ../../framework/topology/SemiGenericTopology.h ModifierMetaRattle.o: ../../framework/topology/topologyutilities.h ModifierMetaRattle.o: ../../framework/base/Matrix3by3.h ModifierMetaRattle.o: ../../framework/base/Stack.h /usr/include/string.h ModifierMetaRattle.o: /usr/lib/gcc/i386-redhat-linux/3.4.6/include/stddef.h ModifierMetaRattle.o: ../../framework/topology/AngleInfo.h ModifierMetaRattle.o: ../../framework/topology/CellListEnumerator.h ModifierMetaRattle.o: ../../framework/topology/buildCellLists.h ModifierMetaRattleShake.o: ModifierMetaRattleShake.h Modifier.h ModifierMetaRattleShake.o: ../../framework/base/Report.h ModifierMetaRattleShake.o: ../../framework/topology/GenericTopology.h ModifierMetaRattleShake.o: ../../framework/base/Atom.h ModifierMetaRattleShake.o: ../../framework/base/Real.h ModifierMetaRattleShake.o: ../../framework/base/AtomType.h ModifierMetaRattleShake.o: ../../framework/topology/Angle.h ModifierMetaRattleShake.o: ../../framework/topology/Bond.h ModifierMetaRattleShake.o: ../../framework/topology/Torsion.h ModifierMetaRattleShake.o: ../../framework/topology/ExclusionTable.h ModifierMetaRattleShake.o: ../../framework/base/pmconstants.h ModifierMetaRattleShake.o: ../../framework/base/simpleTypes.h ModifierMetaRattleShake.o: ../../framework/topology/ExclusionType.h ModifierMetaRattleShake.o: ../../framework/base/AbstractEnumType.h ModifierMetaRattleShake.o: ../../framework/base/stringutilities.h ModifierMetaRattleShake.o: ../../framework/base/Vector3D.h ModifierMetaRattleShake.o: ../../framework/base/mathutilities.h ModifierMetaRattleShake.o: /usr/include/math.h /usr/include/features.h ModifierMetaRattleShake.o: /usr/include/sys/cdefs.h /usr/include/gnu/stubs.h ModifierMetaRattleShake.o: /usr/include/bits/huge_val.h ModifierMetaRattleShake.o: /usr/include/bits/mathdef.h ModifierMetaRattleShake.o: /usr/include/bits/mathcalls.h ModifierMetaRattleShake.o: ../../framework/topology/LennardJonesParameterTable.h ModifierMetaRattleShake.o: ../../framework/topology/LennardJonesParameters.h ModifierMetaRattleShake.o: ../../framework/base/Vector3DBlock.h ModifierMetaRattleShake.o: ../../framework/base/Proxy.h ModifierMetaRattleShake.o: ../../framework/base/Makeable.h ModifierMetaRattleShake.o: ../../framework/base/MakeableDefinition.h ModifierMetaRattleShake.o: ../../framework/base/Parameter.h ModifierMetaRattleShake.o: ../../framework/base/Value.h ModifierMetaRattleShake.o: ../../framework/base/ValueType.h ModifierMetaRattleShake.o: ../../framework/base/ConstraintValueType.h ModifierMetaRattleShake.o: ../../framework/io/CheckpointInputStream.h ModifierMetaRattleShake.o: ../../framework/base/StateRestore.h ModifierMetaRattleShake.o: ../../framework/base/ScalarStructure.h ModifierMetaRattleShake.o: ../../framework/io/CheckpointOutputStream.h ModifierMetaRattleShake.o: ../../framework/base/Molecule.h ModifierMetaRattleShake.o: ../../framework/topology/BankLennardJonesParameterTable.h ModifierMetaRattleShake.o: ../../framework/topology/Topology.h ModifierMetaRattleShake.o: ../../framework/topology/SemiGenericTopology.h ModifierMetaRattleShake.o: ../../framework/topology/topologyutilities.h ModifierMetaRattleShake.o: ../../framework/base/Matrix3by3.h ModifierMetaRattleShake.o: ../../framework/base/Stack.h /usr/include/string.h ModifierMetaRattleShake.o: /usr/lib/gcc/i386-redhat-linux/3.4.6/include/stddef.h ModifierMetaRattleShake.o: ../../framework/topology/AngleInfo.h ModifierMetaRattleShake.o: ../../framework/topology/CellListEnumerator.h ModifierMetaRattleShake.o: ../../framework/topology/buildCellLists.h ModifierMetaShake.o: ModifierMetaShake.h ModifierMetaRattleShake.h Modifier.h ModifierMetaShake.o: ../../framework/base/Report.h ModifierMetaShake.o: ../../framework/topology/GenericTopology.h ModifierMetaShake.o: ../../framework/base/Atom.h ../../framework/base/Real.h ModifierMetaShake.o: ../../framework/base/AtomType.h ModifierMetaShake.o: ../../framework/topology/Angle.h ModifierMetaShake.o: ../../framework/topology/Bond.h ModifierMetaShake.o: ../../framework/topology/Torsion.h ModifierMetaShake.o: ../../framework/topology/ExclusionTable.h ModifierMetaShake.o: ../../framework/base/pmconstants.h ModifierMetaShake.o: ../../framework/base/simpleTypes.h ModifierMetaShake.o: ../../framework/topology/ExclusionType.h ModifierMetaShake.o: ../../framework/base/AbstractEnumType.h ModifierMetaShake.o: ../../framework/base/stringutilities.h ModifierMetaShake.o: ../../framework/base/Vector3D.h ModifierMetaShake.o: ../../framework/base/mathutilities.h /usr/include/math.h ModifierMetaShake.o: /usr/include/features.h /usr/include/sys/cdefs.h ModifierMetaShake.o: /usr/include/gnu/stubs.h /usr/include/bits/huge_val.h ModifierMetaShake.o: /usr/include/bits/mathdef.h ModifierMetaShake.o: /usr/include/bits/mathcalls.h ModifierMetaShake.o: ../../framework/topology/LennardJonesParameterTable.h ModifierMetaShake.o: ../../framework/topology/LennardJonesParameters.h ModifierMetaShake.o: ../../framework/base/Vector3DBlock.h ModifierMetaShake.o: ../../framework/base/Proxy.h ModifierMetaShake.o: ../../framework/base/Makeable.h ModifierMetaShake.o: ../../framework/base/MakeableDefinition.h ModifierMetaShake.o: ../../framework/base/Parameter.h ModifierMetaShake.o: ../../framework/base/Value.h ModifierMetaShake.o: ../../framework/base/ValueType.h ModifierMetaShake.o: ../../framework/base/ConstraintValueType.h ModifierMetaShake.o: ../../framework/io/CheckpointInputStream.h ModifierMetaShake.o: ../../framework/base/StateRestore.h ModifierMetaShake.o: ../../framework/base/ScalarStructure.h ModifierMetaShake.o: ../../framework/io/CheckpointOutputStream.h ModifierMetaShake.o: ../../framework/base/Molecule.h ModifierMetaShake.o: ../../framework/topology/BankLennardJonesParameterTable.h ModifierMetaShake.o: ../../framework/topology/Topology.h ModifierMetaShake.o: ../../framework/topology/SemiGenericTopology.h ModifierMetaShake.o: ../../framework/topology/topologyutilities.h ModifierMetaShake.o: ../../framework/base/Matrix3by3.h ModifierMetaShake.o: ../../framework/base/Stack.h /usr/include/string.h ModifierMetaShake.o: /usr/lib/gcc/i386-redhat-linux/3.4.6/include/stddef.h ModifierMetaShake.o: ../../framework/topology/AngleInfo.h ModifierMetaShake.o: ../../framework/topology/CellListEnumerator.h ModifierMetaShake.o: ../../framework/topology/buildCellLists.h ModifierNPTRattle.o: ModifierNPTRattle.h ModifierMetaRattle.h ModifierNPTRattle.o: ModifierMetaRattleShake.h Modifier.h ModifierNPTRattle.o: ../../framework/base/Report.h ModifierNPTRattle.o: ../../framework/topology/GenericTopology.h ModifierNPTRattle.o: ../../framework/base/Atom.h ../../framework/base/Real.h ModifierNPTRattle.o: ../../framework/base/AtomType.h ModifierNPTRattle.o: ../../framework/topology/Angle.h ModifierNPTRattle.o: ../../framework/topology/Bond.h ModifierNPTRattle.o: ../../framework/topology/Torsion.h ModifierNPTRattle.o: ../../framework/topology/ExclusionTable.h ModifierNPTRattle.o: ../../framework/base/pmconstants.h ModifierNPTRattle.o: ../../framework/base/simpleTypes.h ModifierNPTRattle.o: ../../framework/topology/ExclusionType.h ModifierNPTRattle.o: ../../framework/base/AbstractEnumType.h ModifierNPTRattle.o: ../../framework/base/stringutilities.h ModifierNPTRattle.o: ../../framework/base/Vector3D.h ModifierNPTRattle.o: ../../framework/base/mathutilities.h /usr/include/math.h ModifierNPTRattle.o: /usr/include/features.h /usr/include/sys/cdefs.h ModifierNPTRattle.o: /usr/include/gnu/stubs.h /usr/include/bits/huge_val.h ModifierNPTRattle.o: /usr/include/bits/mathdef.h ModifierNPTRattle.o: /usr/include/bits/mathcalls.h ModifierNPTRattle.o: ../../framework/topology/LennardJonesParameterTable.h ModifierNPTRattle.o: ../../framework/topology/LennardJonesParameters.h ModifierNPTRattle.o: ../../framework/base/Vector3DBlock.h ModifierNPTRattle.o: ../../framework/base/Proxy.h ModifierNPTRattle.o: ../../framework/base/Makeable.h ModifierNPTRattle.o: ../../framework/base/MakeableDefinition.h ModifierNPTRattle.o: ../../framework/base/Parameter.h ModifierNPTRattle.o: ../../framework/base/Value.h ModifierNPTRattle.o: ../../framework/base/ValueType.h ModifierNPTRattle.o: ../../framework/base/ConstraintValueType.h ModifierNPTRattle.o: ../../framework/io/CheckpointInputStream.h ModifierNPTRattle.o: ../../framework/base/StateRestore.h ModifierNPTRattle.o: ../../framework/base/ScalarStructure.h ModifierNPTRattle.o: ../../framework/io/CheckpointOutputStream.h ModifierNPTRattle.o: ../../framework/base/Molecule.h ModifierNPTRattle.o: ../../framework/topology/BankLennardJonesParameterTable.h ModifierNPTRattle.o: Integrator.h IntegratorDefinition.h ModifierNPTRattle.o: ../../framework/base/XSC.h ModifierNPTRattle.o: ../../framework/topology/Topology.h ModifierNPTRattle.o: ../../framework/topology/SemiGenericTopology.h ModifierNPTRattle.o: ../../framework/topology/topologyutilities.h ModifierNPTRattle.o: ../../framework/base/Matrix3by3.h ModifierNPTRattle.o: ../../framework/base/Stack.h /usr/include/string.h ModifierNPTRattle.o: /usr/lib/gcc/i386-redhat-linux/3.4.6/include/stddef.h ModifierNPTRattle.o: ../../framework/topology/AngleInfo.h ModifierNPTRattle.o: ../../framework/topology/CellListEnumerator.h ModifierNPTRattle.o: ../../framework/topology/buildCellLists.h ModifierNPTShake.o: ModifierNPTShake.h ModifierMetaShake.h ModifierNPTShake.o: ModifierMetaRattleShake.h Modifier.h ModifierNPTShake.o: ../../framework/base/Report.h ModifierNPTShake.o: ../../framework/topology/GenericTopology.h ModifierNPTShake.o: ../../framework/base/Atom.h ../../framework/base/Real.h ModifierNPTShake.o: ../../framework/base/AtomType.h ModifierNPTShake.o: ../../framework/topology/Angle.h ModifierNPTShake.o: ../../framework/topology/Bond.h ModifierNPTShake.o: ../../framework/topology/Torsion.h ModifierNPTShake.o: ../../framework/topology/ExclusionTable.h ModifierNPTShake.o: ../../framework/base/pmconstants.h ModifierNPTShake.o: ../../framework/base/simpleTypes.h ModifierNPTShake.o: ../../framework/topology/ExclusionType.h ModifierNPTShake.o: ../../framework/base/AbstractEnumType.h ModifierNPTShake.o: ../../framework/base/stringutilities.h ModifierNPTShake.o: ../../framework/base/Vector3D.h ModifierNPTShake.o: ../../framework/base/mathutilities.h /usr/include/math.h ModifierNPTShake.o: /usr/include/features.h /usr/include/sys/cdefs.h ModifierNPTShake.o: /usr/include/gnu/stubs.h /usr/include/bits/huge_val.h ModifierNPTShake.o: /usr/include/bits/mathdef.h /usr/include/bits/mathcalls.h ModifierNPTShake.o: ../../framework/topology/LennardJonesParameterTable.h ModifierNPTShake.o: ../../framework/topology/LennardJonesParameters.h ModifierNPTShake.o: ../../framework/base/Vector3DBlock.h ModifierNPTShake.o: ../../framework/base/Proxy.h ModifierNPTShake.o: ../../framework/base/Makeable.h ModifierNPTShake.o: ../../framework/base/MakeableDefinition.h ModifierNPTShake.o: ../../framework/base/Parameter.h ModifierNPTShake.o: ../../framework/base/Value.h ModifierNPTShake.o: ../../framework/base/ValueType.h ModifierNPTShake.o: ../../framework/base/ConstraintValueType.h ModifierNPTShake.o: ../../framework/io/CheckpointInputStream.h ModifierNPTShake.o: ../../framework/base/StateRestore.h ModifierNPTShake.o: ../../framework/base/ScalarStructure.h ModifierNPTShake.o: ../../framework/io/CheckpointOutputStream.h ModifierNPTShake.o: ../../framework/base/Molecule.h ModifierNPTShake.o: ../../framework/topology/BankLennardJonesParameterTable.h ModifierNPTShake.o: Integrator.h IntegratorDefinition.h ModifierNPTShake.o: ../../framework/base/XSC.h ModifierNPTShake.o: ../../framework/topology/Topology.h ModifierNPTShake.o: ../../framework/topology/SemiGenericTopology.h ModifierNPTShake.o: ../../framework/topology/topologyutilities.h ModifierNPTShake.o: ../../framework/base/Matrix3by3.h ModifierNPTShake.o: ../../framework/base/Stack.h /usr/include/string.h ModifierNPTShake.o: /usr/lib/gcc/i386-redhat-linux/3.4.6/include/stddef.h ModifierNPTShake.o: ../../framework/topology/AngleInfo.h ModifierNPTShake.o: ../../framework/topology/CellListEnumerator.h ModifierNPTShake.o: ../../framework/topology/buildCellLists.h ModifierNVTRattle.o: ModifierNVTRattle.h ModifierMetaRattle.h ModifierNVTRattle.o: ModifierMetaRattleShake.h Modifier.h ModifierNVTRattle.o: ../../framework/base/Report.h ModifierNVTRattle.o: ../../framework/topology/GenericTopology.h ModifierNVTRattle.o: ../../framework/base/Atom.h ../../framework/base/Real.h ModifierNVTRattle.o: ../../framework/base/AtomType.h ModifierNVTRattle.o: ../../framework/topology/Angle.h ModifierNVTRattle.o: ../../framework/topology/Bond.h ModifierNVTRattle.o: ../../framework/topology/Torsion.h ModifierNVTRattle.o: ../../framework/topology/ExclusionTable.h ModifierNVTRattle.o: ../../framework/base/pmconstants.h ModifierNVTRattle.o: ../../framework/base/simpleTypes.h ModifierNVTRattle.o: ../../framework/topology/ExclusionType.h ModifierNVTRattle.o: ../../framework/base/AbstractEnumType.h ModifierNVTRattle.o: ../../framework/base/stringutilities.h ModifierNVTRattle.o: ../../framework/base/Vector3D.h ModifierNVTRattle.o: ../../framework/base/mathutilities.h /usr/include/math.h ModifierNVTRattle.o: /usr/include/features.h /usr/include/sys/cdefs.h ModifierNVTRattle.o: /usr/include/gnu/stubs.h /usr/include/bits/huge_val.h ModifierNVTRattle.o: /usr/include/bits/mathdef.h ModifierNVTRattle.o: /usr/include/bits/mathcalls.h ModifierNVTRattle.o: ../../framework/topology/LennardJonesParameterTable.h ModifierNVTRattle.o: ../../framework/topology/LennardJonesParameters.h ModifierNVTRattle.o: ../../framework/base/Vector3DBlock.h ModifierNVTRattle.o: ../../framework/base/Proxy.h ModifierNVTRattle.o: ../../framework/base/Makeable.h ModifierNVTRattle.o: ../../framework/base/MakeableDefinition.h ModifierNVTRattle.o: ../../framework/base/Parameter.h ModifierNVTRattle.o: ../../framework/base/Value.h ModifierNVTRattle.o: ../../framework/base/ValueType.h ModifierNVTRattle.o: ../../framework/base/ConstraintValueType.h ModifierNVTRattle.o: ../../framework/io/CheckpointInputStream.h ModifierNVTRattle.o: ../../framework/base/StateRestore.h ModifierNVTRattle.o: ../../framework/base/ScalarStructure.h ModifierNVTRattle.o: ../../framework/io/CheckpointOutputStream.h ModifierNVTRattle.o: ../../framework/base/Molecule.h ModifierNVTRattle.o: ../../framework/topology/BankLennardJonesParameterTable.h ModifierNVTRattle.o: Integrator.h IntegratorDefinition.h ModifierNVTRattle.o: ../../framework/base/XSC.h ModifierNVTRattle.o: ../../framework/topology/Topology.h ModifierNVTRattle.o: ../../framework/topology/SemiGenericTopology.h ModifierNVTRattle.o: ../../framework/topology/topologyutilities.h ModifierNVTRattle.o: ../../framework/base/Matrix3by3.h ModifierNVTRattle.o: ../../framework/base/Stack.h /usr/include/string.h ModifierNVTRattle.o: /usr/lib/gcc/i386-redhat-linux/3.4.6/include/stddef.h ModifierNVTRattle.o: ../../framework/topology/AngleInfo.h ModifierNVTRattle.o: ../../framework/topology/CellListEnumerator.h ModifierNVTRattle.o: ../../framework/topology/buildCellLists.h ModifierNVTShake.o: ModifierNVTShake.h ModifierMetaShake.h ModifierNVTShake.o: ModifierMetaRattleShake.h Modifier.h ModifierNVTShake.o: ../../framework/base/Report.h ModifierNVTShake.o: ../../framework/topology/GenericTopology.h ModifierNVTShake.o: ../../framework/base/Atom.h ../../framework/base/Real.h ModifierNVTShake.o: ../../framework/base/AtomType.h ModifierNVTShake.o: ../../framework/topology/Angle.h ModifierNVTShake.o: ../../framework/topology/Bond.h ModifierNVTShake.o: ../../framework/topology/Torsion.h ModifierNVTShake.o: ../../framework/topology/ExclusionTable.h ModifierNVTShake.o: ../../framework/base/pmconstants.h ModifierNVTShake.o: ../../framework/base/simpleTypes.h ModifierNVTShake.o: ../../framework/topology/ExclusionType.h ModifierNVTShake.o: ../../framework/base/AbstractEnumType.h ModifierNVTShake.o: ../../framework/base/stringutilities.h ModifierNVTShake.o: ../../framework/base/Vector3D.h ModifierNVTShake.o: ../../framework/base/mathutilities.h /usr/include/math.h ModifierNVTShake.o: /usr/include/features.h /usr/include/sys/cdefs.h ModifierNVTShake.o: /usr/include/gnu/stubs.h /usr/include/bits/huge_val.h ModifierNVTShake.o: /usr/include/bits/mathdef.h /usr/include/bits/mathcalls.h ModifierNVTShake.o: ../../framework/topology/LennardJonesParameterTable.h ModifierNVTShake.o: ../../framework/topology/LennardJonesParameters.h ModifierNVTShake.o: ../../framework/base/Vector3DBlock.h ModifierNVTShake.o: ../../framework/base/Proxy.h ModifierNVTShake.o: ../../framework/base/Makeable.h ModifierNVTShake.o: ../../framework/base/MakeableDefinition.h ModifierNVTShake.o: ../../framework/base/Parameter.h ModifierNVTShake.o: ../../framework/base/Value.h ModifierNVTShake.o: ../../framework/base/ValueType.h ModifierNVTShake.o: ../../framework/base/ConstraintValueType.h ModifierNVTShake.o: ../../framework/io/CheckpointInputStream.h ModifierNVTShake.o: ../../framework/base/StateRestore.h ModifierNVTShake.o: ../../framework/base/ScalarStructure.h ModifierNVTShake.o: ../../framework/io/CheckpointOutputStream.h ModifierNVTShake.o: ../../framework/base/Molecule.h ModifierNVTShake.o: ../../framework/topology/BankLennardJonesParameterTable.h ModifierNVTShake.o: Integrator.h IntegratorDefinition.h ModifierNVTShake.o: ../../framework/base/XSC.h ModifierNVTShake.o: ../../framework/topology/Topology.h ModifierNVTShake.o: ../../framework/topology/SemiGenericTopology.h ModifierNVTShake.o: ../../framework/topology/topologyutilities.h ModifierNVTShake.o: ../../framework/base/Matrix3by3.h ModifierNVTShake.o: ../../framework/base/Stack.h /usr/include/string.h ModifierNVTShake.o: /usr/lib/gcc/i386-redhat-linux/3.4.6/include/stddef.h ModifierNVTShake.o: ../../framework/topology/AngleInfo.h ModifierNVTShake.o: ../../framework/topology/CellListEnumerator.h ModifierNVTShake.o: ../../framework/topology/buildCellLists.h ModifierRattle.o: ModifierRattle.h ModifierMetaRattle.h ModifierRattle.o: ModifierMetaRattleShake.h Modifier.h ModifierRattle.o: ../../framework/base/Report.h ModifierRattle.o: ../../framework/topology/GenericTopology.h ModifierRattle.o: ../../framework/base/Atom.h ../../framework/base/Real.h ModifierRattle.o: ../../framework/base/AtomType.h ModifierRattle.o: ../../framework/topology/Angle.h ModifierRattle.o: ../../framework/topology/Bond.h ModifierRattle.o: ../../framework/topology/Torsion.h ModifierRattle.o: ../../framework/topology/ExclusionTable.h ModifierRattle.o: ../../framework/base/pmconstants.h ModifierRattle.o: ../../framework/base/simpleTypes.h ModifierRattle.o: ../../framework/topology/ExclusionType.h ModifierRattle.o: ../../framework/base/AbstractEnumType.h ModifierRattle.o: ../../framework/base/stringutilities.h ModifierRattle.o: ../../framework/base/Vector3D.h ModifierRattle.o: ../../framework/base/mathutilities.h /usr/include/math.h ModifierRattle.o: /usr/include/features.h /usr/include/sys/cdefs.h ModifierRattle.o: /usr/include/gnu/stubs.h /usr/include/bits/huge_val.h ModifierRattle.o: /usr/include/bits/mathdef.h /usr/include/bits/mathcalls.h ModifierRattle.o: ../../framework/topology/LennardJonesParameterTable.h ModifierRattle.o: ../../framework/topology/LennardJonesParameters.h ModifierRattle.o: ../../framework/base/Vector3DBlock.h ModifierRattle.o: ../../framework/base/Proxy.h ModifierRattle.o: ../../framework/base/Makeable.h ModifierRattle.o: ../../framework/base/MakeableDefinition.h ModifierRattle.o: ../../framework/base/Parameter.h ModifierRattle.o: ../../framework/base/Value.h ModifierRattle.o: ../../framework/base/ValueType.h ModifierRattle.o: ../../framework/base/ConstraintValueType.h ModifierRattle.o: ../../framework/io/CheckpointInputStream.h ModifierRattle.o: ../../framework/base/StateRestore.h ModifierRattle.o: ../../framework/base/ScalarStructure.h ModifierRattle.o: ../../framework/io/CheckpointOutputStream.h ModifierRattle.o: ../../framework/base/Molecule.h ModifierRattle.o: ../../framework/topology/BankLennardJonesParameterTable.h ModifierRattle.o: Integrator.h IntegratorDefinition.h ModifierRattle.o: ../../framework/base/XSC.h ModifierRattle.o: ../../framework/topology/Topology.h ModifierRattle.o: ../../framework/topology/SemiGenericTopology.h ModifierRattle.o: ../../framework/topology/topologyutilities.h ModifierRattle.o: ../../framework/base/Matrix3by3.h ModifierRattle.o: ../../framework/base/Stack.h /usr/include/string.h ModifierRattle.o: /usr/lib/gcc/i386-redhat-linux/3.4.6/include/stddef.h ModifierRattle.o: ../../framework/topology/AngleInfo.h ModifierRattle.o: ../../framework/topology/CellListEnumerator.h ModifierRattle.o: ../../framework/topology/buildCellLists.h ModifierShadow.o: ModifierShadow.h Modifier.h ../../framework/base/Report.h ModifierShadow.o: ../../framework/topology/GenericTopology.h ModifierShadow.o: ../../framework/base/Atom.h ../../framework/base/Real.h ModifierShadow.o: ../../framework/base/AtomType.h ModifierShadow.o: ../../framework/topology/Angle.h ModifierShadow.o: ../../framework/topology/Bond.h ModifierShadow.o: ../../framework/topology/Torsion.h ModifierShadow.o: ../../framework/topology/ExclusionTable.h ModifierShadow.o: ../../framework/base/pmconstants.h ModifierShadow.o: ../../framework/base/simpleTypes.h ModifierShadow.o: ../../framework/topology/ExclusionType.h ModifierShadow.o: ../../framework/base/AbstractEnumType.h ModifierShadow.o: ../../framework/base/stringutilities.h ModifierShadow.o: ../../framework/base/Vector3D.h ModifierShadow.o: ../../framework/base/mathutilities.h /usr/include/math.h ModifierShadow.o: /usr/include/features.h /usr/include/sys/cdefs.h ModifierShadow.o: /usr/include/gnu/stubs.h /usr/include/bits/huge_val.h ModifierShadow.o: /usr/include/bits/mathdef.h /usr/include/bits/mathcalls.h ModifierShadow.o: ../../framework/topology/LennardJonesParameterTable.h ModifierShadow.o: ../../framework/topology/LennardJonesParameters.h ModifierShadow.o: ../../framework/base/Vector3DBlock.h ModifierShadow.o: ../../framework/base/Proxy.h ModifierShadow.o: ../../framework/base/Makeable.h ModifierShadow.o: ../../framework/base/MakeableDefinition.h ModifierShadow.o: ../../framework/base/Parameter.h ModifierShadow.o: ../../framework/base/Value.h ModifierShadow.o: ../../framework/base/ValueType.h ModifierShadow.o: ../../framework/base/ConstraintValueType.h ModifierShadow.o: ../../framework/io/CheckpointInputStream.h ModifierShadow.o: ../../framework/base/StateRestore.h ModifierShadow.o: ../../framework/base/ScalarStructure.h ModifierShadow.o: ../../framework/io/CheckpointOutputStream.h ModifierShadow.o: ../../framework/base/Molecule.h ModifierShadow.o: ../../framework/topology/BankLennardJonesParameterTable.h ModifierShadow.o: Integrator.h IntegratorDefinition.h ModifierShadow.o: ../../framework/base/XSC.h ModifierShadow.o: ../../framework/topology/Topology.h ModifierShadow.o: ../../framework/topology/SemiGenericTopology.h ModifierShadow.o: ../../framework/topology/topologyutilities.h ModifierShadow.o: ../../framework/base/Matrix3by3.h ModifierShadow.o: ../../framework/base/Stack.h /usr/include/string.h ModifierShadow.o: /usr/lib/gcc/i386-redhat-linux/3.4.6/include/stddef.h ModifierShadow.o: ../../framework/topology/AngleInfo.h ModifierShadow.o: ../../framework/topology/CellListEnumerator.h ModifierShadow.o: ../../framework/topology/buildCellLists.h ModifierShake.o: ModifierShake.h ModifierMetaShake.h ModifierShake.o: ModifierMetaRattleShake.h Modifier.h ModifierShake.o: ../../framework/base/Report.h ModifierShake.o: ../../framework/topology/GenericTopology.h ModifierShake.o: ../../framework/base/Atom.h ../../framework/base/Real.h ModifierShake.o: ../../framework/base/AtomType.h ModifierShake.o: ../../framework/topology/Angle.h ModifierShake.o: ../../framework/topology/Bond.h ModifierShake.o: ../../framework/topology/Torsion.h ModifierShake.o: ../../framework/topology/ExclusionTable.h ModifierShake.o: ../../framework/base/pmconstants.h ModifierShake.o: ../../framework/base/simpleTypes.h ModifierShake.o: ../../framework/topology/ExclusionType.h ModifierShake.o: ../../framework/base/AbstractEnumType.h ModifierShake.o: ../../framework/base/stringutilities.h ModifierShake.o: ../../framework/base/Vector3D.h ModifierShake.o: ../../framework/base/mathutilities.h /usr/include/math.h ModifierShake.o: /usr/include/features.h /usr/include/sys/cdefs.h ModifierShake.o: /usr/include/gnu/stubs.h /usr/include/bits/huge_val.h ModifierShake.o: /usr/include/bits/mathdef.h /usr/include/bits/mathcalls.h ModifierShake.o: ../../framework/topology/LennardJonesParameterTable.h ModifierShake.o: ../../framework/topology/LennardJonesParameters.h ModifierShake.o: ../../framework/base/Vector3DBlock.h ModifierShake.o: ../../framework/base/Proxy.h ../../framework/base/Makeable.h ModifierShake.o: ../../framework/base/MakeableDefinition.h ModifierShake.o: ../../framework/base/Parameter.h ModifierShake.o: ../../framework/base/Value.h ModifierShake.o: ../../framework/base/ValueType.h ModifierShake.o: ../../framework/base/ConstraintValueType.h ModifierShake.o: ../../framework/io/CheckpointInputStream.h ModifierShake.o: ../../framework/base/StateRestore.h ModifierShake.o: ../../framework/base/ScalarStructure.h ModifierShake.o: ../../framework/io/CheckpointOutputStream.h ModifierShake.o: ../../framework/base/Molecule.h ModifierShake.o: ../../framework/topology/BankLennardJonesParameterTable.h ModifierShake.o: Integrator.h IntegratorDefinition.h ModifierShake.o: ../../framework/base/XSC.h ModifierShake.o: ../../framework/topology/Topology.h ModifierShake.o: ../../framework/topology/SemiGenericTopology.h ModifierShake.o: ../../framework/topology/topologyutilities.h ModifierShake.o: ../../framework/base/Matrix3by3.h ModifierShake.o: ../../framework/base/Stack.h /usr/include/string.h ModifierShake.o: /usr/lib/gcc/i386-redhat-linux/3.4.6/include/stddef.h ModifierShake.o: ../../framework/topology/AngleInfo.h ModifierShake.o: ../../framework/topology/CellListEnumerator.h ModifierShake.o: ../../framework/topology/buildCellLists.h NPTVerletIntegrator.o: NPTVerletIntegrator.h STSIntegrator.h NPTVerletIntegrator.o: StandardIntegrator.h Integrator.h NPTVerletIntegrator.o: ../../framework/base/Makeable.h NPTVerletIntegrator.o: ../../framework/base/MakeableDefinition.h NPTVerletIntegrator.o: ../../framework/base/Parameter.h NPTVerletIntegrator.o: ../../framework/base/Value.h NPTVerletIntegrator.o: ../../framework/base/ValueType.h NPTVerletIntegrator.o: ../../framework/base/AbstractEnumType.h NPTVerletIntegrator.o: ../../framework/base/stringutilities.h NPTVerletIntegrator.o: ../../framework/base/Vector3D.h NPTVerletIntegrator.o: ../../framework/base/mathutilities.h NPTVerletIntegrator.o: ../../framework/base/pmconstants.h NPTVerletIntegrator.o: ../../framework/base/Real.h NPTVerletIntegrator.o: ../../framework/base/simpleTypes.h /usr/include/math.h NPTVerletIntegrator.o: /usr/include/features.h /usr/include/sys/cdefs.h NPTVerletIntegrator.o: /usr/include/gnu/stubs.h /usr/include/bits/huge_val.h NPTVerletIntegrator.o: /usr/include/bits/mathdef.h NPTVerletIntegrator.o: /usr/include/bits/mathcalls.h NPTVerletIntegrator.o: ../../framework/base/Report.h NPTVerletIntegrator.o: ../../framework/base/ConstraintValueType.h NPTVerletIntegrator.o: ../../framework/io/CheckpointInputStream.h NPTVerletIntegrator.o: ../../framework/base/StateRestore.h NPTVerletIntegrator.o: ../../framework/base/Vector3DBlock.h NPTVerletIntegrator.o: ../../framework/base/Proxy.h NPTVerletIntegrator.o: ../../framework/base/ScalarStructure.h NPTVerletIntegrator.o: ../../framework/io/CheckpointOutputStream.h NPTVerletIntegrator.o: IntegratorDefinition.h ../../framework/base/XSC.h NPTVerletIntegrator.o: ../../framework/topology/GenericTopology.h NPTVerletIntegrator.o: ../../framework/base/Atom.h NPTVerletIntegrator.o: ../../framework/base/AtomType.h NPTVerletIntegrator.o: ../../framework/topology/Angle.h NPTVerletIntegrator.o: ../../framework/topology/Bond.h NPTVerletIntegrator.o: ../../framework/topology/Torsion.h NPTVerletIntegrator.o: ../../framework/topology/ExclusionTable.h NPTVerletIntegrator.o: ../../framework/topology/ExclusionType.h NPTVerletIntegrator.o: ../../framework/topology/LennardJonesParameterTable.h NPTVerletIntegrator.o: ../../framework/topology/LennardJonesParameters.h NPTVerletIntegrator.o: ../../framework/base/Molecule.h NPTVerletIntegrator.o: ../../framework/topology/BankLennardJonesParameterTable.h NPTVerletIntegrator.o: ../../framework/forces/ForceGroup.h NPTVerletIntegrator.o: ../../framework/topology/topologyutilities.h NPTVerletIntegrator.o: ../../framework/base/Matrix3by3.h NPTVerletIntegrator.o: ../../framework/base/Stack.h /usr/include/string.h NPTVerletIntegrator.o: /usr/lib/gcc/i386-redhat-linux/3.4.6/include/stddef.h NPTVerletIntegrator.o: ../../framework/topology/AngleInfo.h NPTVerletIntegrator.o: ModifierPreForceThermostat.h Modifier.h NPTVerletIntegrator.o: ModifierPreForceBarostat.h NPTVerletIntegrator.o: ModifierPostForceThermostat.h NPTVerletIntegrator.o: ModifierPostForceBarostat.h ModifierNPTShake.h NPTVerletIntegrator.o: ModifierMetaShake.h ModifierMetaRattleShake.h NPTVerletIntegrator.o: ModifierNPTRattle.h ModifierMetaRattle.h NVTVerletIntegrator.o: NVTVerletIntegrator.h STSIntegrator.h NVTVerletIntegrator.o: StandardIntegrator.h Integrator.h NVTVerletIntegrator.o: ../../framework/base/Makeable.h NVTVerletIntegrator.o: ../../framework/base/MakeableDefinition.h NVTVerletIntegrator.o: ../../framework/base/Parameter.h NVTVerletIntegrator.o: ../../framework/base/Value.h NVTVerletIntegrator.o: ../../framework/base/ValueType.h NVTVerletIntegrator.o: ../../framework/base/AbstractEnumType.h NVTVerletIntegrator.o: ../../framework/base/stringutilities.h NVTVerletIntegrator.o: ../../framework/base/Vector3D.h NVTVerletIntegrator.o: ../../framework/base/mathutilities.h NVTVerletIntegrator.o: ../../framework/base/pmconstants.h NVTVerletIntegrator.o: ../../framework/base/Real.h NVTVerletIntegrator.o: ../../framework/base/simpleTypes.h /usr/include/math.h NVTVerletIntegrator.o: /usr/include/features.h /usr/include/sys/cdefs.h NVTVerletIntegrator.o: /usr/include/gnu/stubs.h /usr/include/bits/huge_val.h NVTVerletIntegrator.o: /usr/include/bits/mathdef.h NVTVerletIntegrator.o: /usr/include/bits/mathcalls.h NVTVerletIntegrator.o: ../../framework/base/Report.h NVTVerletIntegrator.o: ../../framework/base/ConstraintValueType.h NVTVerletIntegrator.o: ../../framework/io/CheckpointInputStream.h NVTVerletIntegrator.o: ../../framework/base/StateRestore.h NVTVerletIntegrator.o: ../../framework/base/Vector3DBlock.h NVTVerletIntegrator.o: ../../framework/base/Proxy.h NVTVerletIntegrator.o: ../../framework/base/ScalarStructure.h NVTVerletIntegrator.o: ../../framework/io/CheckpointOutputStream.h NVTVerletIntegrator.o: IntegratorDefinition.h ../../framework/base/XSC.h NVTVerletIntegrator.o: ../../framework/topology/GenericTopology.h NVTVerletIntegrator.o: ../../framework/base/Atom.h NVTVerletIntegrator.o: ../../framework/base/AtomType.h NVTVerletIntegrator.o: ../../framework/topology/Angle.h NVTVerletIntegrator.o: ../../framework/topology/Bond.h NVTVerletIntegrator.o: ../../framework/topology/Torsion.h NVTVerletIntegrator.o: ../../framework/topology/ExclusionTable.h NVTVerletIntegrator.o: ../../framework/topology/ExclusionType.h NVTVerletIntegrator.o: ../../framework/topology/LennardJonesParameterTable.h NVTVerletIntegrator.o: ../../framework/topology/LennardJonesParameters.h NVTVerletIntegrator.o: ../../framework/base/Molecule.h NVTVerletIntegrator.o: ../../framework/topology/BankLennardJonesParameterTable.h NVTVerletIntegrator.o: ../../framework/forces/ForceGroup.h NVTVerletIntegrator.o: ../../framework/topology/topologyutilities.h NVTVerletIntegrator.o: ../../framework/base/Matrix3by3.h NVTVerletIntegrator.o: ../../framework/base/Stack.h /usr/include/string.h NVTVerletIntegrator.o: /usr/lib/gcc/i386-redhat-linux/3.4.6/include/stddef.h NVTVerletIntegrator.o: ../../framework/topology/AngleInfo.h NVTVerletIntegrator.o: ModifierPreForceThermostat.h Modifier.h NVTVerletIntegrator.o: ModifierPostForceThermostat.h ModifierNVTShake.h NVTVerletIntegrator.o: ModifierMetaShake.h ModifierMetaRattleShake.h NVTVerletIntegrator.o: ModifierNVTRattle.h ModifierMetaRattle.h NormModeInt.o: NormModeInt.h MTSIntegrator.h StandardIntegrator.h NormModeInt.o: Integrator.h ../../framework/base/Makeable.h NormModeInt.o: ../../framework/base/MakeableDefinition.h NormModeInt.o: ../../framework/base/Parameter.h ../../framework/base/Value.h NormModeInt.o: ../../framework/base/ValueType.h NormModeInt.o: ../../framework/base/AbstractEnumType.h NormModeInt.o: ../../framework/base/stringutilities.h NormModeInt.o: ../../framework/base/Vector3D.h NormModeInt.o: ../../framework/base/mathutilities.h NormModeInt.o: ../../framework/base/pmconstants.h ../../framework/base/Real.h NormModeInt.o: ../../framework/base/simpleTypes.h /usr/include/math.h NormModeInt.o: /usr/include/features.h /usr/include/sys/cdefs.h NormModeInt.o: /usr/include/gnu/stubs.h /usr/include/bits/huge_val.h NormModeInt.o: /usr/include/bits/mathdef.h /usr/include/bits/mathcalls.h NormModeInt.o: ../../framework/base/Report.h NormModeInt.o: ../../framework/base/ConstraintValueType.h NormModeInt.o: ../../framework/io/CheckpointInputStream.h NormModeInt.o: ../../framework/base/StateRestore.h NormModeInt.o: ../../framework/base/Vector3DBlock.h NormModeInt.o: ../../framework/base/Proxy.h NormModeInt.o: ../../framework/base/ScalarStructure.h NormModeInt.o: ../../framework/io/CheckpointOutputStream.h NormModeInt.o: IntegratorDefinition.h ../../framework/base/XSC.h NormModeInt.o: ../../framework/forces/ForceGroup.h NormModeInt.o: ../../framework/topology/GenericTopology.h NormModeInt.o: ../../framework/base/Atom.h ../../framework/base/AtomType.h NormModeInt.o: ../../framework/topology/Angle.h NormModeInt.o: ../../framework/topology/Bond.h NormModeInt.o: ../../framework/topology/Torsion.h NormModeInt.o: ../../framework/topology/ExclusionTable.h NormModeInt.o: ../../framework/topology/ExclusionType.h NormModeInt.o: ../../framework/topology/LennardJonesParameterTable.h NormModeInt.o: ../../framework/topology/LennardJonesParameters.h NormModeInt.o: ../../framework/base/Molecule.h NormModeInt.o: ../../framework/topology/BankLennardJonesParameterTable.h NormModeInt.o: ../../framework/topology/topologyutilities.h NormModeInt.o: ../../framework/base/Matrix3by3.h ../../framework/base/Stack.h NormModeInt.o: /usr/include/string.h NormModeInt.o: /usr/lib/gcc/i386-redhat-linux/3.4.6/include/stddef.h NormModeInt.o: ../../framework/topology/AngleInfo.h NormModeInt.o: ../../framework/base/ReducedHessAngle.h NormModeInt.o: ../../framework/base/reducedHessBond.h /usr/include/stdio.h NormModeInt.o: /usr/include/bits/types.h /usr/include/bits/wordsize.h NormModeInt.o: /usr/include/bits/typesizes.h /usr/include/libio.h NormModeInt.o: /usr/include/_G_config.h /usr/include/wchar.h NormModeInt.o: /usr/include/bits/wchar.h /usr/include/gconv.h NormModeInt.o: /usr/lib/gcc/i386-redhat-linux/3.4.6/include/stdarg.h NormModeInt.o: /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h NormModeInt.o: /afs/nd.edu/user25/tcickovs/Research/LAPACK/include/SimTKlapack.h NormModeMin.o: NormModeMin.h STSIntegrator.h StandardIntegrator.h NormModeMin.o: Integrator.h ../../framework/base/Makeable.h NormModeMin.o: ../../framework/base/MakeableDefinition.h NormModeMin.o: ../../framework/base/Parameter.h ../../framework/base/Value.h NormModeMin.o: ../../framework/base/ValueType.h NormModeMin.o: ../../framework/base/AbstractEnumType.h NormModeMin.o: ../../framework/base/stringutilities.h NormModeMin.o: ../../framework/base/Vector3D.h NormModeMin.o: ../../framework/base/mathutilities.h NormModeMin.o: ../../framework/base/pmconstants.h ../../framework/base/Real.h NormModeMin.o: ../../framework/base/simpleTypes.h /usr/include/math.h NormModeMin.o: /usr/include/features.h /usr/include/sys/cdefs.h NormModeMin.o: /usr/include/gnu/stubs.h /usr/include/bits/huge_val.h NormModeMin.o: /usr/include/bits/mathdef.h /usr/include/bits/mathcalls.h NormModeMin.o: ../../framework/base/Report.h NormModeMin.o: ../../framework/base/ConstraintValueType.h NormModeMin.o: ../../framework/io/CheckpointInputStream.h NormModeMin.o: ../../framework/base/StateRestore.h NormModeMin.o: ../../framework/base/Vector3DBlock.h NormModeMin.o: ../../framework/base/Proxy.h NormModeMin.o: ../../framework/base/ScalarStructure.h NormModeMin.o: ../../framework/io/CheckpointOutputStream.h NormModeMin.o: IntegratorDefinition.h ../../framework/base/XSC.h NormModeMin.o: ../../framework/topology/GenericTopology.h NormModeMin.o: ../../framework/base/Atom.h ../../framework/base/AtomType.h NormModeMin.o: ../../framework/topology/Angle.h NormModeMin.o: ../../framework/topology/Bond.h NormModeMin.o: ../../framework/topology/Torsion.h NormModeMin.o: ../../framework/topology/ExclusionTable.h NormModeMin.o: ../../framework/topology/ExclusionType.h NormModeMin.o: ../../framework/topology/LennardJonesParameterTable.h NormModeMin.o: ../../framework/topology/LennardJonesParameters.h NormModeMin.o: ../../framework/base/Molecule.h NormModeMin.o: ../../framework/topology/BankLennardJonesParameterTable.h NormModeMin.o: NormModeInt.h MTSIntegrator.h NormModeMin.o: ../../framework/forces/ForceGroup.h NormModeMin.o: ../../framework/topology/topologyutilities.h NormModeMin.o: ../../framework/base/Matrix3by3.h ../../framework/base/Stack.h NormModeMin.o: /usr/include/string.h NormModeMin.o: /usr/lib/gcc/i386-redhat-linux/3.4.6/include/stddef.h NormModeMin.o: ../../framework/topology/AngleInfo.h NormModeMin.o: ../../framework/base/ReducedHessAngle.h NormModeMin.o: ../../framework/base/reducedHessBond.h /usr/include/stdio.h NormModeMin.o: /usr/include/bits/types.h /usr/include/bits/wordsize.h NormModeMin.o: /usr/include/bits/typesizes.h /usr/include/libio.h NormModeMin.o: /usr/include/_G_config.h /usr/include/wchar.h NormModeMin.o: /usr/include/bits/wchar.h /usr/include/gconv.h NormModeMin.o: /usr/lib/gcc/i386-redhat-linux/3.4.6/include/stdarg.h NormModeMin.o: /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h NormModeMin.o: /afs/nd.edu/user25/tcickovs/Research/LAPACK/include/SimTKlapack.h NormModeDiag.o: NormModeDiag.h MTSIntegrator.h StandardIntegrator.h NormModeDiag.o: Integrator.h ../../framework/base/Makeable.h NormModeDiag.o: ../../framework/base/MakeableDefinition.h NormModeDiag.o: ../../framework/base/Parameter.h ../../framework/base/Value.h NormModeDiag.o: ../../framework/base/ValueType.h NormModeDiag.o: ../../framework/base/AbstractEnumType.h NormModeDiag.o: ../../framework/base/stringutilities.h NormModeDiag.o: ../../framework/base/Vector3D.h NormModeDiag.o: ../../framework/base/mathutilities.h NormModeDiag.o: ../../framework/base/pmconstants.h NormModeDiag.o: ../../framework/base/Real.h NormModeDiag.o: ../../framework/base/simpleTypes.h /usr/include/math.h NormModeDiag.o: /usr/include/features.h /usr/include/sys/cdefs.h NormModeDiag.o: /usr/include/gnu/stubs.h /usr/include/bits/huge_val.h NormModeDiag.o: /usr/include/bits/mathdef.h /usr/include/bits/mathcalls.h NormModeDiag.o: ../../framework/base/Report.h NormModeDiag.o: ../../framework/base/ConstraintValueType.h NormModeDiag.o: ../../framework/io/CheckpointInputStream.h NormModeDiag.o: ../../framework/base/StateRestore.h NormModeDiag.o: ../../framework/base/Vector3DBlock.h NormModeDiag.o: ../../framework/base/Proxy.h NormModeDiag.o: ../../framework/base/ScalarStructure.h NormModeDiag.o: ../../framework/io/CheckpointOutputStream.h NormModeDiag.o: IntegratorDefinition.h ../../framework/base/XSC.h Hessian.h NormModeDiag.o: ../../framework/forces/Force.h NormModeInt.h NormModeDiag.o: ../../framework/topology/GenericTopology.h NormModeDiag.o: ../../framework/base/Atom.h ../../framework/base/AtomType.h NormModeDiag.o: ../../framework/topology/Angle.h NormModeDiag.o: ../../framework/topology/Bond.h NormModeDiag.o: ../../framework/topology/Torsion.h NormModeDiag.o: ../../framework/topology/ExclusionTable.h NormModeDiag.o: ../../framework/topology/ExclusionType.h NormModeDiag.o: ../../framework/topology/LennardJonesParameterTable.h NormModeDiag.o: ../../framework/topology/LennardJonesParameters.h NormModeDiag.o: ../../framework/base/Molecule.h NormModeDiag.o: ../../framework/topology/BankLennardJonesParameterTable.h NormModeDiag.o: /afs/nd.edu/user25/tcickovs/Research/LAPACK/include/SimTKlapack.h NormModeVisual.o: NormModeVisual.h STSIntegrator.h StandardIntegrator.h NormModeVisual.o: Integrator.h ../../framework/base/Makeable.h NormModeVisual.o: ../../framework/base/MakeableDefinition.h NormModeVisual.o: ../../framework/base/Parameter.h NormModeVisual.o: ../../framework/base/Value.h NormModeVisual.o: ../../framework/base/ValueType.h NormModeVisual.o: ../../framework/base/AbstractEnumType.h NormModeVisual.o: ../../framework/base/stringutilities.h NormModeVisual.o: ../../framework/base/Vector3D.h NormModeVisual.o: ../../framework/base/mathutilities.h NormModeVisual.o: ../../framework/base/pmconstants.h NormModeVisual.o: ../../framework/base/Real.h NormModeVisual.o: ../../framework/base/simpleTypes.h /usr/include/math.h NormModeVisual.o: /usr/include/features.h /usr/include/sys/cdefs.h NormModeVisual.o: /usr/include/gnu/stubs.h /usr/include/bits/huge_val.h NormModeVisual.o: /usr/include/bits/mathdef.h /usr/include/bits/mathcalls.h NormModeVisual.o: ../../framework/base/Report.h NormModeVisual.o: ../../framework/base/ConstraintValueType.h NormModeVisual.o: ../../framework/io/CheckpointInputStream.h NormModeVisual.o: ../../framework/base/StateRestore.h NormModeVisual.o: ../../framework/base/Vector3DBlock.h NormModeVisual.o: ../../framework/base/Proxy.h NormModeVisual.o: ../../framework/base/ScalarStructure.h NormModeVisual.o: ../../framework/io/CheckpointOutputStream.h NormModeVisual.o: IntegratorDefinition.h ../../framework/base/XSC.h NormModeVisual.o: ../../framework/topology/GenericTopology.h NormModeVisual.o: ../../framework/base/Atom.h ../../framework/base/AtomType.h NormModeVisual.o: ../../framework/topology/Angle.h NormModeVisual.o: ../../framework/topology/Bond.h NormModeVisual.o: ../../framework/topology/Torsion.h NormModeVisual.o: ../../framework/topology/ExclusionTable.h NormModeVisual.o: ../../framework/topology/ExclusionType.h NormModeVisual.o: ../../framework/topology/LennardJonesParameterTable.h NormModeVisual.o: ../../framework/topology/LennardJonesParameters.h NormModeVisual.o: ../../framework/base/Molecule.h NormModeVisual.o: ../../framework/topology/BankLennardJonesParameterTable.h NormModeVisual.o: ../../framework/forces/ForceGroup.h NormModeVisual.o: ../../framework/topology/topologyutilities.h NormModeVisual.o: ../../framework/base/Matrix3by3.h NormModeVisual.o: ../../framework/base/Stack.h /usr/include/string.h NormModeVisual.o: /usr/lib/gcc/i386-redhat-linux/3.4.6/include/stddef.h NormModeVisual.o: ../../framework/topology/AngleInfo.h NormModeVisual.o: ../../framework/base/ReducedHessAngle.h NormModeVisual.o: ../../framework/base/reducedHessBond.h NormModeVisual.o: ../../framework/io/ConfigurationReader.h NormModeVisual.o: ../../framework/io/Reader.h ../../framework/io/File.h NormModeVisual.o: ../../framework/base/Configuration.h NormModeVisual.o: ../frontend/InputPosVel.h ../frontend/InputPosVelType.h NormModeVisual.o: ../../framework/base/XYZ.h ../../framework/base/PDB.h NormModeVisual.o: ../../framework/io/PARReader.h ../../framework/base/PAR.h NormModeVisual.o: ../../framework/io/PSFReader.h ../../framework/base/PSF.h NormModeVisual.o: /afs/nd.edu/user25/tcickovs/Research/LAPACK/include/SimTKlapack.h NoseNVTLeapfrogIntegrator.o: NoseNVTLeapfrogIntegrator.h STSIntegrator.h NoseNVTLeapfrogIntegrator.o: StandardIntegrator.h Integrator.h NoseNVTLeapfrogIntegrator.o: ../../framework/base/Makeable.h NoseNVTLeapfrogIntegrator.o: ../../framework/base/MakeableDefinition.h NoseNVTLeapfrogIntegrator.o: ../../framework/base/Parameter.h NoseNVTLeapfrogIntegrator.o: ../../framework/base/Value.h NoseNVTLeapfrogIntegrator.o: ../../framework/base/ValueType.h NoseNVTLeapfrogIntegrator.o: ../../framework/base/AbstractEnumType.h NoseNVTLeapfrogIntegrator.o: ../../framework/base/stringutilities.h NoseNVTLeapfrogIntegrator.o: ../../framework/base/Vector3D.h NoseNVTLeapfrogIntegrator.o: ../../framework/base/mathutilities.h NoseNVTLeapfrogIntegrator.o: ../../framework/base/pmconstants.h NoseNVTLeapfrogIntegrator.o: ../../framework/base/Real.h NoseNVTLeapfrogIntegrator.o: ../../framework/base/simpleTypes.h NoseNVTLeapfrogIntegrator.o: /usr/include/math.h /usr/include/features.h NoseNVTLeapfrogIntegrator.o: /usr/include/sys/cdefs.h NoseNVTLeapfrogIntegrator.o: /usr/include/gnu/stubs.h NoseNVTLeapfrogIntegrator.o: /usr/include/bits/huge_val.h NoseNVTLeapfrogIntegrator.o: /usr/include/bits/mathdef.h NoseNVTLeapfrogIntegrator.o: /usr/include/bits/mathcalls.h NoseNVTLeapfrogIntegrator.o: ../../framework/base/Report.h NoseNVTLeapfrogIntegrator.o: ../../framework/base/ConstraintValueType.h NoseNVTLeapfrogIntegrator.o: ../../framework/io/CheckpointInputStream.h NoseNVTLeapfrogIntegrator.o: ../../framework/base/StateRestore.h NoseNVTLeapfrogIntegrator.o: ../../framework/base/Vector3DBlock.h NoseNVTLeapfrogIntegrator.o: ../../framework/base/Proxy.h NoseNVTLeapfrogIntegrator.o: ../../framework/base/ScalarStructure.h NoseNVTLeapfrogIntegrator.o: ../../framework/io/CheckpointOutputStream.h NoseNVTLeapfrogIntegrator.o: IntegratorDefinition.h NoseNVTLeapfrogIntegrator.o: ../../framework/base/XSC.h NoseNVTLeapfrogIntegrator.o: ../../framework/topology/GenericTopology.h NoseNVTLeapfrogIntegrator.o: ../../framework/base/Atom.h NoseNVTLeapfrogIntegrator.o: ../../framework/base/AtomType.h NoseNVTLeapfrogIntegrator.o: ../../framework/topology/Angle.h NoseNVTLeapfrogIntegrator.o: ../../framework/topology/Bond.h NoseNVTLeapfrogIntegrator.o: ../../framework/topology/Torsion.h NoseNVTLeapfrogIntegrator.o: ../../framework/topology/ExclusionTable.h NoseNVTLeapfrogIntegrator.o: ../../framework/topology/ExclusionType.h NoseNVTLeapfrogIntegrator.o: ../../framework/topology/LennardJonesParameterTable.h NoseNVTLeapfrogIntegrator.o: ../../framework/topology/LennardJonesParameters.h NoseNVTLeapfrogIntegrator.o: ../../framework/base/Molecule.h NoseNVTLeapfrogIntegrator.o: ../../framework/topology/BankLennardJonesParameterTable.h NoseNVTLeapfrogIntegrator.o: ../../framework/forces/ForceGroup.h NoseNVTLeapfrogIntegrator.o: ../../framework/topology/topologyutilities.h NoseNVTLeapfrogIntegrator.o: ../../framework/base/Matrix3by3.h NoseNVTLeapfrogIntegrator.o: ../../framework/base/Stack.h NoseNVTLeapfrogIntegrator.o: /usr/include/string.h NoseNVTLeapfrogIntegrator.o: /usr/lib/gcc/i386-redhat-linux/3.4.6/include/stddef.h NoseNVTLeapfrogIntegrator.o: ../../framework/topology/AngleInfo.h NoseNVTLeapfrogIntegrator.o: ModifierFriction.h Modifier.h PLeapfrogIntegrator.o: PLeapfrogIntegrator.h STSIntegrator.h PLeapfrogIntegrator.o: StandardIntegrator.h Integrator.h PLeapfrogIntegrator.o: ../../framework/base/Makeable.h PLeapfrogIntegrator.o: ../../framework/base/MakeableDefinition.h PLeapfrogIntegrator.o: ../../framework/base/Parameter.h PLeapfrogIntegrator.o: ../../framework/base/Value.h PLeapfrogIntegrator.o: ../../framework/base/ValueType.h PLeapfrogIntegrator.o: ../../framework/base/AbstractEnumType.h PLeapfrogIntegrator.o: ../../framework/base/stringutilities.h PLeapfrogIntegrator.o: ../../framework/base/Vector3D.h PLeapfrogIntegrator.o: ../../framework/base/mathutilities.h PLeapfrogIntegrator.o: ../../framework/base/pmconstants.h PLeapfrogIntegrator.o: ../../framework/base/Real.h PLeapfrogIntegrator.o: ../../framework/base/simpleTypes.h /usr/include/math.h PLeapfrogIntegrator.o: /usr/include/features.h /usr/include/sys/cdefs.h PLeapfrogIntegrator.o: /usr/include/gnu/stubs.h /usr/include/bits/huge_val.h PLeapfrogIntegrator.o: /usr/include/bits/mathdef.h PLeapfrogIntegrator.o: /usr/include/bits/mathcalls.h PLeapfrogIntegrator.o: ../../framework/base/Report.h PLeapfrogIntegrator.o: ../../framework/base/ConstraintValueType.h PLeapfrogIntegrator.o: ../../framework/io/CheckpointInputStream.h PLeapfrogIntegrator.o: ../../framework/base/StateRestore.h PLeapfrogIntegrator.o: ../../framework/base/Vector3DBlock.h PLeapfrogIntegrator.o: ../../framework/base/Proxy.h PLeapfrogIntegrator.o: ../../framework/base/ScalarStructure.h PLeapfrogIntegrator.o: ../../framework/io/CheckpointOutputStream.h PLeapfrogIntegrator.o: IntegratorDefinition.h ../../framework/base/XSC.h PLeapfrogIntegrator.o: ../../framework/topology/GenericTopology.h PLeapfrogIntegrator.o: ../../framework/base/Atom.h PLeapfrogIntegrator.o: ../../framework/base/AtomType.h PLeapfrogIntegrator.o: ../../framework/topology/Angle.h PLeapfrogIntegrator.o: ../../framework/topology/Bond.h PLeapfrogIntegrator.o: ../../framework/topology/Torsion.h PLeapfrogIntegrator.o: ../../framework/topology/ExclusionTable.h PLeapfrogIntegrator.o: ../../framework/topology/ExclusionType.h PLeapfrogIntegrator.o: ../../framework/topology/LennardJonesParameterTable.h PLeapfrogIntegrator.o: ../../framework/topology/LennardJonesParameters.h PLeapfrogIntegrator.o: ../../framework/base/Molecule.h PLeapfrogIntegrator.o: ../../framework/topology/BankLennardJonesParameterTable.h PLeapfrogIntegrator.o: ../../framework/forces/ForceGroup.h PLeapfrogIntegrator.o: ../../framework/topology/topologyutilities.h PLeapfrogIntegrator.o: ../../framework/base/Matrix3by3.h PLeapfrogIntegrator.o: ../../framework/base/Stack.h /usr/include/string.h PLeapfrogIntegrator.o: /usr/lib/gcc/i386-redhat-linux/3.4.6/include/stddef.h PLeapfrogIntegrator.o: ../../framework/topology/AngleInfo.h PaulTrapIntegrator.o: PaulTrapIntegrator.h PaulTrapIntegrator.o: ../../framework/base/AbstractEnumType.h PaulTrapIntegrator.o: ../../framework/base/stringutilities.h PaulTrapIntegrator.o: ../../framework/base/Vector3D.h PaulTrapIntegrator.o: ../../framework/base/mathutilities.h PaulTrapIntegrator.o: ../../framework/base/pmconstants.h PaulTrapIntegrator.o: ../../framework/base/Real.h PaulTrapIntegrator.o: ../../framework/base/simpleTypes.h /usr/include/math.h PaulTrapIntegrator.o: /usr/include/features.h /usr/include/sys/cdefs.h PaulTrapIntegrator.o: /usr/include/gnu/stubs.h /usr/include/bits/huge_val.h PaulTrapIntegrator.o: /usr/include/bits/mathdef.h PaulTrapIntegrator.o: /usr/include/bits/mathcalls.h PaulTrapIntegrator.o: ../../framework/base/Report.h STSIntegrator.h PaulTrapIntegrator.o: StandardIntegrator.h Integrator.h PaulTrapIntegrator.o: ../../framework/base/Makeable.h PaulTrapIntegrator.o: ../../framework/base/MakeableDefinition.h PaulTrapIntegrator.o: ../../framework/base/Parameter.h PaulTrapIntegrator.o: ../../framework/base/Value.h PaulTrapIntegrator.o: ../../framework/base/ValueType.h PaulTrapIntegrator.o: ../../framework/base/ConstraintValueType.h PaulTrapIntegrator.o: ../../framework/io/CheckpointInputStream.h PaulTrapIntegrator.o: ../../framework/base/StateRestore.h PaulTrapIntegrator.o: ../../framework/base/Vector3DBlock.h PaulTrapIntegrator.o: ../../framework/base/Proxy.h PaulTrapIntegrator.o: ../../framework/base/ScalarStructure.h PaulTrapIntegrator.o: ../../framework/io/CheckpointOutputStream.h PaulTrapIntegrator.o: IntegratorDefinition.h ../../framework/base/XSC.h PaulTrapIntegrator.o: ../../framework/topology/GenericTopology.h PaulTrapIntegrator.o: ../../framework/base/Atom.h PaulTrapIntegrator.o: ../../framework/base/AtomType.h PaulTrapIntegrator.o: ../../framework/topology/Angle.h PaulTrapIntegrator.o: ../../framework/topology/Bond.h PaulTrapIntegrator.o: ../../framework/topology/Torsion.h PaulTrapIntegrator.o: ../../framework/topology/ExclusionTable.h PaulTrapIntegrator.o: ../../framework/topology/ExclusionType.h PaulTrapIntegrator.o: ../../framework/topology/LennardJonesParameterTable.h PaulTrapIntegrator.o: ../../framework/topology/LennardJonesParameters.h PaulTrapIntegrator.o: ../../framework/base/Molecule.h PaulTrapIntegrator.o: ../../framework/topology/BankLennardJonesParameterTable.h PaulTrapIntegrator.o: ../../framework/forces/ForceGroup.h PaulTrapIntegrator.o: ../../framework/topology/topologyutilities.h PaulTrapIntegrator.o: ../../framework/base/Matrix3by3.h PaulTrapIntegrator.o: ../../framework/base/Stack.h /usr/include/string.h PaulTrapIntegrator.o: /usr/lib/gcc/i386-redhat-linux/3.4.6/include/stddef.h PaulTrapIntegrator.o: ../../framework/topology/AngleInfo.h STSIntegrator.o: STSIntegrator.h StandardIntegrator.h Integrator.h STSIntegrator.o: ../../framework/base/Makeable.h STSIntegrator.o: ../../framework/base/MakeableDefinition.h STSIntegrator.o: ../../framework/base/Parameter.h STSIntegrator.o: ../../framework/base/Value.h STSIntegrator.o: ../../framework/base/ValueType.h STSIntegrator.o: ../../framework/base/AbstractEnumType.h STSIntegrator.o: ../../framework/base/stringutilities.h STSIntegrator.o: ../../framework/base/Vector3D.h STSIntegrator.o: ../../framework/base/mathutilities.h STSIntegrator.o: ../../framework/base/pmconstants.h STSIntegrator.o: ../../framework/base/Real.h STSIntegrator.o: ../../framework/base/simpleTypes.h /usr/include/math.h STSIntegrator.o: /usr/include/features.h /usr/include/sys/cdefs.h STSIntegrator.o: /usr/include/gnu/stubs.h /usr/include/bits/huge_val.h STSIntegrator.o: /usr/include/bits/mathdef.h /usr/include/bits/mathcalls.h STSIntegrator.o: ../../framework/base/Report.h STSIntegrator.o: ../../framework/base/ConstraintValueType.h STSIntegrator.o: ../../framework/io/CheckpointInputStream.h STSIntegrator.o: ../../framework/base/StateRestore.h STSIntegrator.o: ../../framework/base/Vector3DBlock.h STSIntegrator.o: ../../framework/base/Proxy.h STSIntegrator.o: ../../framework/base/ScalarStructure.h STSIntegrator.o: ../../framework/io/CheckpointOutputStream.h STSIntegrator.o: IntegratorDefinition.h ../../framework/base/XSC.h STSIntegrator.o: ../../framework/topology/GenericTopology.h STSIntegrator.o: ../../framework/base/Atom.h ../../framework/base/AtomType.h STSIntegrator.o: ../../framework/topology/Angle.h STSIntegrator.o: ../../framework/topology/Bond.h STSIntegrator.o: ../../framework/topology/Torsion.h STSIntegrator.o: ../../framework/topology/ExclusionTable.h STSIntegrator.o: ../../framework/topology/ExclusionType.h STSIntegrator.o: ../../framework/topology/LennardJonesParameterTable.h STSIntegrator.o: ../../framework/topology/LennardJonesParameters.h STSIntegrator.o: ../../framework/base/Molecule.h STSIntegrator.o: ../../framework/topology/BankLennardJonesParameterTable.h STSIntegrator.o: ../../framework/forces/ForceGroup.h STSIntegrator.o: ../../framework/topology/topologyutilities.h STSIntegrator.o: ../../framework/base/Matrix3by3.h STSIntegrator.o: ../../framework/base/Stack.h /usr/include/string.h STSIntegrator.o: /usr/lib/gcc/i386-redhat-linux/3.4.6/include/stddef.h STSIntegrator.o: ../../framework/topology/AngleInfo.h STSIntegrator.o: ModifierIncrementTimestep.h Modifier.h ShadowHMCIntegrator.o: ../../framework/base/ScalarStructure.h ShadowHMCIntegrator.o: ../../framework/base/Proxy.h ShadowHMCIntegrator.o: ../../framework/base/Vector3D.h ShadowHMCIntegrator.o: ../../framework/base/mathutilities.h ShadowHMCIntegrator.o: ../../framework/base/pmconstants.h ShadowHMCIntegrator.o: ../../framework/base/Real.h ShadowHMCIntegrator.o: ../../framework/base/simpleTypes.h /usr/include/math.h ShadowHMCIntegrator.o: /usr/include/features.h /usr/include/sys/cdefs.h ShadowHMCIntegrator.o: /usr/include/gnu/stubs.h /usr/include/bits/huge_val.h ShadowHMCIntegrator.o: /usr/include/bits/mathdef.h ShadowHMCIntegrator.o: /usr/include/bits/mathcalls.h ShadowHMCIntegrator.o: ../../framework/base/Report.h ShadowHMCIntegrator.h ShadowHMCIntegrator.o: MCIntegrator.h MTSIntegrator.h StandardIntegrator.h ShadowHMCIntegrator.o: Integrator.h ../../framework/base/Makeable.h ShadowHMCIntegrator.o: ../../framework/base/MakeableDefinition.h ShadowHMCIntegrator.o: ../../framework/base/Parameter.h ShadowHMCIntegrator.o: ../../framework/base/Value.h ShadowHMCIntegrator.o: ../../framework/base/ValueType.h ShadowHMCIntegrator.o: ../../framework/base/AbstractEnumType.h ShadowHMCIntegrator.o: ../../framework/base/stringutilities.h ShadowHMCIntegrator.o: ../../framework/base/ConstraintValueType.h ShadowHMCIntegrator.o: ../../framework/io/CheckpointInputStream.h ShadowHMCIntegrator.o: ../../framework/base/StateRestore.h ShadowHMCIntegrator.o: ../../framework/base/Vector3DBlock.h ShadowHMCIntegrator.o: ../../framework/io/CheckpointOutputStream.h ShadowHMCIntegrator.o: IntegratorDefinition.h ../../framework/base/XSC.h ShadowHMCIntegrator.o: ModifierShadow.h Modifier.h ShadowHMCIntegrator.o: ../../framework/topology/GenericTopology.h ShadowHMCIntegrator.o: ../../framework/base/Atom.h ShadowHMCIntegrator.o: ../../framework/base/AtomType.h ShadowHMCIntegrator.o: ../../framework/topology/Angle.h ShadowHMCIntegrator.o: ../../framework/topology/Bond.h ShadowHMCIntegrator.o: ../../framework/topology/Torsion.h ShadowHMCIntegrator.o: ../../framework/topology/ExclusionTable.h ShadowHMCIntegrator.o: ../../framework/topology/ExclusionType.h ShadowHMCIntegrator.o: ../../framework/topology/LennardJonesParameterTable.h ShadowHMCIntegrator.o: ../../framework/topology/LennardJonesParameters.h ShadowHMCIntegrator.o: ../../framework/base/Molecule.h ShadowHMCIntegrator.o: ../../framework/topology/BankLennardJonesParameterTable.h ShadowHMCIntegrator.o: ../../framework/topology/topologyutilities.h ShadowHMCIntegrator.o: ../../framework/base/Matrix3by3.h ShadowHMCIntegrator.o: ../../framework/base/Stack.h /usr/include/string.h ShadowHMCIntegrator.o: /usr/lib/gcc/i386-redhat-linux/3.4.6/include/stddef.h ShadowHMCIntegrator.o: ../../framework/topology/AngleInfo.h STSIntegrator.h StandardIntegrator.o: StandardIntegrator.h Integrator.h StandardIntegrator.o: ../../framework/base/Makeable.h StandardIntegrator.o: ../../framework/base/MakeableDefinition.h StandardIntegrator.o: ../../framework/base/Parameter.h StandardIntegrator.o: ../../framework/base/Value.h StandardIntegrator.o: ../../framework/base/ValueType.h StandardIntegrator.o: ../../framework/base/AbstractEnumType.h StandardIntegrator.o: ../../framework/base/stringutilities.h StandardIntegrator.o: ../../framework/base/Vector3D.h StandardIntegrator.o: ../../framework/base/mathutilities.h StandardIntegrator.o: ../../framework/base/pmconstants.h StandardIntegrator.o: ../../framework/base/Real.h StandardIntegrator.o: ../../framework/base/simpleTypes.h /usr/include/math.h StandardIntegrator.o: /usr/include/features.h /usr/include/sys/cdefs.h StandardIntegrator.o: /usr/include/gnu/stubs.h /usr/include/bits/huge_val.h StandardIntegrator.o: /usr/include/bits/mathdef.h StandardIntegrator.o: /usr/include/bits/mathcalls.h StandardIntegrator.o: ../../framework/base/Report.h StandardIntegrator.o: ../../framework/base/ConstraintValueType.h StandardIntegrator.o: ../../framework/io/CheckpointInputStream.h StandardIntegrator.o: ../../framework/base/StateRestore.h StandardIntegrator.o: ../../framework/base/Vector3DBlock.h StandardIntegrator.o: ../../framework/base/Proxy.h StandardIntegrator.o: ../../framework/base/ScalarStructure.h StandardIntegrator.o: ../../framework/io/CheckpointOutputStream.h StandardIntegrator.o: IntegratorDefinition.h ../../framework/base/XSC.h StandardIntegrator.o: ../../framework/parallel/Parallel.h StandardIntegrator.o: ../../framework/parallel/ParallelType.h StandardIntegrator.o: ../../framework/forces/ForceGroup.h StandardIntegrator.o: ../../framework/topology/GenericTopology.h StandardIntegrator.o: ../../framework/base/Atom.h StandardIntegrator.o: ../../framework/base/AtomType.h StandardIntegrator.o: ../../framework/topology/Angle.h StandardIntegrator.o: ../../framework/topology/Bond.h StandardIntegrator.o: ../../framework/topology/Torsion.h StandardIntegrator.o: ../../framework/topology/ExclusionTable.h StandardIntegrator.o: ../../framework/topology/ExclusionType.h StandardIntegrator.o: ../../framework/topology/LennardJonesParameterTable.h StandardIntegrator.o: ../../framework/topology/LennardJonesParameters.h StandardIntegrator.o: ../../framework/base/Molecule.h StandardIntegrator.o: ../../framework/topology/BankLennardJonesParameterTable.h StandardIntegrator.o: ../../framework/topology/topologyutilities.h StandardIntegrator.o: ../../framework/base/Matrix3by3.h StandardIntegrator.o: ../../framework/base/Stack.h /usr/include/string.h StandardIntegrator.o: /usr/lib/gcc/i386-redhat-linux/3.4.6/include/stddef.h StandardIntegrator.o: ../../framework/topology/AngleInfo.h Hessian.o: Hessian.h ../../framework/forces/Force.h Hessian.o: ../../framework/base/Makeable.h Hessian.o: ../../framework/base/MakeableDefinition.h Hessian.o: ../../framework/base/Parameter.h ../../framework/base/Value.h Hessian.o: ../../framework/base/ValueType.h Hessian.o: ../../framework/base/AbstractEnumType.h Hessian.o: ../../framework/base/stringutilities.h Hessian.o: ../../framework/base/Vector3D.h Hessian.o: ../../framework/base/mathutilities.h Hessian.o: ../../framework/base/pmconstants.h ../../framework/base/Real.h Hessian.o: ../../framework/base/simpleTypes.h /usr/include/math.h Hessian.o: /usr/include/features.h /usr/include/sys/cdefs.h Hessian.o: /usr/include/gnu/stubs.h /usr/include/bits/huge_val.h Hessian.o: /usr/include/bits/mathdef.h /usr/include/bits/mathcalls.h Hessian.o: ../../framework/base/Report.h Hessian.o: ../../framework/base/ConstraintValueType.h Hessian.o: ../../framework/io/CheckpointInputStream.h Hessian.o: ../../framework/base/StateRestore.h Hessian.o: ../../framework/base/Vector3DBlock.h ../../framework/base/Proxy.h Hessian.o: ../../framework/base/ScalarStructure.h Hessian.o: ../../framework/io/CheckpointOutputStream.h Hessian.o: ../../framework/forces/ForceGroup.h Hessian.o: ../../framework/topology/GenericTopology.h Hessian.o: ../../framework/base/Atom.h ../../framework/base/AtomType.h Hessian.o: ../../framework/topology/Angle.h ../../framework/topology/Bond.h Hessian.o: ../../framework/topology/Torsion.h Hessian.o: ../../framework/topology/ExclusionTable.h Hessian.o: ../../framework/topology/ExclusionType.h Hessian.o: ../../framework/topology/LennardJonesParameterTable.h Hessian.o: ../../framework/topology/LennardJonesParameters.h Hessian.o: ../../framework/base/Molecule.h Hessian.o: ../../framework/topology/BankLennardJonesParameterTable.h Hessian.o: ../../framework/topology/topologyutilities.h Hessian.o: ../../framework/base/Matrix3by3.h ../../framework/base/Stack.h Hessian.o: /usr/include/string.h Hessian.o: /usr/lib/gcc/i386-redhat-linux/3.4.6/include/stddef.h Hessian.o: ../../framework/topology/AngleInfo.h Hessian.o: ../../framework/base/ReducedHessAngle.h Hessian.o: ../../framework/base/reducedHessBond.h Hessian.o: ../../framework/forces/HessDihedral.h Hessian.o: ../../framework/forces/ReducedHessLennardJones.h Hessian.o: ../../framework/forces/LennardJonesForce.h Hessian.o: ../../framework/forces/ReducedHessCoulomb.h Hessian.o: ../../framework/forces/ReducedHessCoulombDiElec.h Hessian.o: ../../framework/forces/CoulombForce.h Hessian.o: ../../framework/forces/CoulombForceDiElec.h Hessian.o: ../../framework/topology/CnSwitchingFunction.h Hessian.o: ../../framework/topology/CnSwitchingFunctionBase.h Hessian.o: ../../framework/topology/C2SwitchingFunction.h Hessian.o: ../../framework/topology/C2SwitchingFunctionBase.h Hessian.o: ../../framework/topology/C1SwitchingFunction.h Hessian.o: ../../framework/topology/C1SwitchingFunctionBase.h