*>>>> CHARMM22 Parameter File for butanol/water mixture <<<<<<<<<<<<<<<< *>>>>>>>>>>>>>>>>>>>>>>> November 2004 <<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< *>>>>>>>>>>>>>>>>>> Prepared by T. I. Morrow <<<<<<<<<<<<<<<<<<<<<<<<<<< ! REMARKS ! Revision 1 -- April 2005 -- Added TraPPe models (truncated interactions at 14 A) ! BONDS ! !V(bond) = Kb(b - b0)**2 ! !Kb: kcal/mole/A**2 !b0: A ! !atom type Kb b0 identity ! !-- single-topology bonds for iSGMD simulations !-- for the UA model U1 U2 500.0 1.540 0 ! UA alkane C-C bond -- ethane identity (TraPPe model) U1 U2 500.0 1.540 1 ! dummy-C bond -- methane identity (TraPPe model) ANGLES ! !V(angle) = Ktheta(Theta - Theta0)**2 ! !V(Urey-Bradley) = Kub(S - S0)**2 ! !Ktheta: kcal/mole/rad**2 !Theta0: degrees !Kub: kcal/mole/A**2 (Urey-Bradley) !S0: A ! !atom types Ktheta Theta0 Kub S0 identity ! DIHEDRALS ! !V(dihedral) = Kchi(1 + cos(n(chi) - delta)) ! !Kchi: kcal/mole !n: multiplicity !delta: degrees ! !atom types Kchi n delta identity ! IMPROPER ! !V(improper) = Kpsi(psi - psi0)**2 ! !Kpsi: kcal/mole/rad**2 !psi0: degrees !note that the second column of numbers (0) is ignored ! !atom types Kpsi psi0 identity ! NONBONDED nbxmod 5 atom cdiel shift vatom vdistance vswitch - cutnb 14.0 ctofnb 12.0 ctonnb 10.0 eps 1.0 e14fac 1.0 wmin 1.5 !adm jr., 5/08/91, suggested cutoff scheme ! !V(Lennard-Jones) = Eps,i,j[(Rmin,i,j/ri,j)**12 - 2(Rmin,i,j/ri,j)**6] ! !epsilon: kcal/mole, Eps,i,j = sqrt(eps,i * eps,j) !Rmin/2: A, Rmin,i,j = Rmin/2,i + Rmin/2,j ! !atom ignored epsilon Rmin/2 ignored eps,1-4 Rmin/2,1-4 identity ! !-- single topology LJ parameters for iSGMD simulations !-- for the UA model U1 0.0 -0.19460 2.105 0.0 -0.0000 1.000 0 ! ethane methyl CH3 -- ethane identity (TraPPe model) U1 0.0 -0.29390 2.093 0.0 -0.0000 1.000 1 ! methane atom -- methane identity (TraPPe model) U2 0.0 -0.19460 2.105 0.0 -0.0000 1.000 0 ! ethane methyl CH3 -- ethane identity (TraPPe model) U2 0.0 -0.00000 2.105 0.0 -0.0000 1.000 1 ! dummy atom -- methane identity (TraPPe model) HBOND CUTHB 0.5 ! If you want to do hbond analysis (only), then use ! READ PARAM APPEND CARD ! to append hbond parameters from the file: par_hbond.inp END