# NAMESPACE

# Imports and exports

import(gtools)
import(GOstats)
import(SparseM)
import(Matrix)
import(graph)
import(RBGL)

exportClasses("MBnetwork","MBparams","MBdataDE","MBdataKS","MBgibbsPars")
exportMethods("addData","addGenes","addNodes","addParams","trimParams","calcCPDs","calcLods","calcMargs","calcSim","calcTruth","compatObjects","CcrossValid","CpermSigMeta","CpermSigGene","CpermSigKnow","CrocAuc","CcorrProf","CcrossValidLik","CpriorEnrich","CgibbsSampler","CgreedySearch","CsampleNIter","getAssoc","initCounts","randInit","setLMmethod","setProp","setChains","setThresh","setBurn","setSlice","setSamp","setKLrepeat","setGSmethod","setValues","setValue","setZeros","setZero","setPrior","drawStory")
export(Csim.go,Csim.binary,sim.thresh,calc.all.pms,calc.graph.pars,calc.graph.pars.old,calc.graph.pars.fast,calc.pms.pllel,filegen.pms.pllel,geom.graph.test,get.go.ontos,graph2igraph,igraph2graph,sim.conn.GRG,Csim.conn.GS,sim.conn,sim.data,sim.data.GS)
export(.Last.lib)