Instructions for using the Makefile provided.

You must already have the SimTK core binaries installed from SimTK.org.

You will need to slightly edit the Makefile to make it run on your system.

Open the Makefile and make the appropriate changes (debug libraries or not), and set the Default install directory to the correct location.

To compile all example programs type "make all"

To compile just adenylate_mobilities.1.0 (for example) type make adenylate_mobilities.1.0.

Before you run the executables, remember to add the SimTK Core library directory to your library path. The simplest way to 
do this is to type the following commands:

For linux (for the bash shell, assuming installation was done in the default location: /usr/local/SimTK): 
$ export LD_LIBRARY_PATH=/usr/local/SimTK/core/lib 

For MAC (for the bash shell, assuming installation was done in the default location: /Developer/SimTK/core/lib):
$export DYLD_LIBRARY_PATH=/Developer/SimTK/core/lib