#============================================================* # show surface * #============================================================* # set units units units scale name = mass uname = reducedMass value = 10000.0 # open pdb file database open name = neck format = pdb file = t.pdb # read molecule molecule read name = m1 database = neck molecule m1 xform rotation = [ 45 15 -60 ] # create a some domains domain create d1 = C[760-815] domain d1 surface read format = pm file = t_surf.pm domain d1 surface color = [ 1 0 0 ] render = color show graphics background color = [ 1 1 1 ]