#============================================================*
#               test simulation of peptide planes            *
#                                                            *
# look at model of two residues.                             *
#============================================================*

# set units
units
units scale  name = mass   uname = reducedMass   value = 10000.0

# set units
units
units scale  name = mass   uname = reducedMass   value = 10000.0

database open name = db1  format = pdb  file = iq.pdb
molecule read  name = m1   database = db1

domain create d1 = C
domain d1 xform translation = [ -7.0453  -3.6504 1.0206 ]

domain d1 bonds  atoms = true  atom_color = element  \
                 render = solid \
                 bond_color = [ 1 0 0 ] width = 3 show
domain d1 backbone  color = [ 0 1 0 ] width = 2  show 

domains write list = { d1 } chains = { C } file = iq_xform.pdb