#============================================================* # test simulation of peptide planes * # * # use pin joints. * #============================================================* # set units units units scale name = mass uname = reducedMass value = 10000.0 # set units units units scale name = mass uname = reducedMass value = 10000.0 database open name = db1 format = pdb file = d1.pdb molecule read name = m1 database = db1 domain create d1 = A domain d1 bonds atoms = true atom_color = [ 1 0 0 ] \ bond_color = [ 1 0 0 ] width = 3 show