#============================================================*
#               test restraints                              *
#                                                            *
# fit 1m45 to 1m46                                           *
#============================================================*

# set units
units
units scale  name = mass   uname = reducedMass   value = 10000.0


# open pdb file
#---------------
database open name = bneck format = pdb  file = 1M45.pdb                
molecule read  name = m2   database = bneck
domain create bound = AB
domain bound backbone color = [ 1 0.7 0.7 ] width = 2 show


# open pdb file
#---------------
database open name = neck format = pdb  file = 1M46.pdb                

# read molecule
#---------------
molecule read  name = m1   database = neck
molecule m1  xform transaltion = [ -2.01791 -3.05832 -0.54274 ] 
domain create hc = A


#--------------------
domain create camClobe = A[82-148]
domain camClobe backbone color = [ 1 1 0 ] width = 2 show

# create iq domain
#--------------------
domain create iq = B
domain iq backbone color = [ 0.6 0.6 0.6 ] width = 2 show


# fit bound cam model
#--------------------
domain bound fit  sequence = B[814-817]             \
                destination = iq                   \
                destination_sequence = B[862-865]   \
                atom_names = { O C CA }

domain bound backbone name = fit color = [ 1 1 1 ] width = 2 show