#============================================================* # test surface read and display for a domain * #============================================================* # set units units units scale name = mass uname = reducedMass value = 10000.0 # open pdb file database open name = neck_xform format = pdb file = ../../data/neck_xform.pdb # read molecule molecule read database = neck_xform name = m1 model = 1 type = protein # create domains #--------------- domain create hc = C domain hc backbone color = [ 0.6 0.6 0.6 ] width = 2 show domain hc atoms color = [ 0.6 0.6 0.6 ] width = 2 show domain create iq1 = AC[760-788] domain iq1 backbone color = [ 1 0 0 ] width = 2 show #domain iq1 atoms color = [ 1 0 0 ] width = 2 show domain iq1 surface read format = pm file = sasa/camA_surf.pm domain iq1 surface color = [ 1.0 0.3 0.3 ] display = line show #domain iq1 surface color = [ 1 0 0 ] display = solid show domain create iq2 = BC[788-814] domain iq2 backbone color = [ 0 1 0 ] width = 2 show #domain iq2 atoms color = [ 0 1 0 ] width = 2 show domain iq2 surface read format = pm file = sasa/camB_surf.pm #domain iq2 surface color = [ 0.3 1.0 0.3 ] display = line show domain iq2 surface color = [ 0.3 1.0 0.3 ] display = solid show domain create iq3 = DC[814-836] domain iq3 backbone color = [ 0 0 1 ] width = 2 show #domain iq3 atoms color = [ 0 0 1 ] width = 2 show domain iq3 surface read format = pm file = sasa/camD_surf.pm #domain iq3 surface color = [ 0.3 0.3 1.0 ] display = line show domain iq3 surface color = [ 0.3 0.3 1.0 ] display = solid show