#CLPR=/home/sdcsoftware/linux/CLIPPER_INTEL_0106/
CLPR=/home/sdcsoftware/linux/CLIPPER_INTEL_0906_GENERIC
#CLPR=/home/sdcsoftware/linux/CLIPPER_INTEL_0906_RHEL4
CCPX=${CLPR}/ccp4-onlylibs-dev

INSTDIR=.

ICLPR=${CLPR}/include
LCLPR=${CLPR}/lib
ICCPX=${CCPX}/include
LCCPX=${CCPX}/lib
ISSM=${CCPX}/lib/ssm
LSSM=${CCPX}/lib
IINSTDIR=${INSTDIR}/src
LINSTDIR=${INSTDIR}/lib
BINSTDIR=${INSTDIR}/bin
TDIR=${INSTDIR}/tmp

# Options for various setting
#-I${ICCTBX} -I${ISCITBXS} -I${ISCITBXB} -I${IBOOST}
INC_DIRS=-I${ICLPR} -I${ICCPX} -I${ISSM} -I${IINSTDIR}
LIB_DIRS=-L${LCCPX} -L${LCLPR} -L${LFORT} -L${LSSM} 

OBJS=${TDIR}/CRankFrags.o ${TDIR}/main.o

COMPILER=g++ 
#CFLAGS = -O3 -march=pentium4 -fomit-frame-pointer -funroll-loops -mfpmath=sse -msse2 # on P4 sse implies sse2
CFLAGS = -g # on P4 sse implies sse2

ICCOMP=icpc
#ICCFLAGS= -g
ICCFLAGS= -g -xW

#CC= ${COMPILER} ${CFLAGS} ${INC_DIRS} 
CC= ${ICCOMP} ${ICCFLAGS} ${INC_DIRS} 
C= gcc ${FLAGS} ${INC_DIRS}

${TDIR}/main.o : ${IINSTDIR}/main.cpp
	${CC} -c -fPIC -o $@ ${IINSTDIR}/main.cpp

${TDIR}/CRankFrags.o : ${IINSTDIR}/CRankFrags.cpp
	${CC} -c -fPIC -o $@ ${IINSTDIR}/CRankFrags.cpp

CombineFrags : ${OBJS}
	${CC} ${LIB_DIRS} -o ${BINSTDIR}/$@ ${OBJS} -lclipper-mmdb -lmmdb -lclipper-ccp4 -lccp4c -lclipper-contrib -lclipper-phs -lclipper-core -lrfftw -lfftw