\documentclass[a4paper]{book}
\usepackage{a4wide}
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\begin{document}
\begin{titlepage}
\vspace*{7cm}
\begin{center}
{\Large Sim\-TK molecular structure API Reference Manual}\\
\vspace*{1cm}
{\large Generated by Doxygen 1.4.2}\\
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{\small Thu Apr 21 15:25:52 2005}\\
\end{center}
\end{titlepage}
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\tableofcontents
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\pagenumbering{arabic}
\chapter{Sim\-TK molecular structure API Directory Hierarchy}
\input{dirs}
\chapter{Sim\-TK molecular structure API Hierarchical Index}
\input{hierarchy}
\chapter{Sim\-TK molecular structure API Class Index}
\input{annotated}
\chapter{Sim\-TK molecular structure API Directory Documentation}
\input{dir_000002}
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\include{dir_000001}
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\include{dir_000005}
\include{dir_000006}
\include{dir_000004}
\chapter{Sim\-TK molecular structure API Class Documentation}
\input{classorg_1_1simtk_1_1molecularstructure_1_1_atom}
\include{classorg_1_1simtk_1_1molecularstructure_1_1_biopolymer}
\include{classorg_1_1simtk_1_1molecularstructure_1_1_chemical_element}
\include{classorg_1_1simtk_1_1molecularstructure_1_1_d_n_a}
\include{classorg_1_1simtk_1_1molecularstructure_1_1_molecular_assembly}
\include{classorg_1_1simtk_1_1molecularstructure_1_1_molecule}
\include{classorg_1_1simtk_1_1molecularstructure_1_1_nucleic_acid}
\include{classorg_1_1simtk_1_1molecularstructure_1_1_p_d_b_atom}
\include{classorg_1_1simtk_1_1molecularstructure_1_1_protein}
\include{classorg_1_1simtk_1_1molecularstructure_1_1_r_n_a}
\printindex
\end{document}
