firstStage   2  
lastStage    2  

reportingInterval 1.0
numReportingIntervals  40

temperature 1.0  1
removeRigidBodyMomentum false

# beetle TERT template:
protein E 94 CYDYDAIPWLQNVEPNLRPKLLLKHNLFLLDNIVKPIIAFYYKPIKTLNGHEIKFIRKEEYIS 

#  threaded human TERT fragment sequence
protein H 522 RSPGVGCVPAAEHRLREEILAKFLHWLMSVYVVELLRSFFYVTETTFQKNRLFFYRKSV 


mobilizer E 94 Rigid E 156 
constrainToGround E 94

proteinThreading H 	524	544	E	96	116 300.0 
proteinThreading H 	544	580	E	117	153 300.0 


#excludedVolumeRadius   .9 
contact H 522 AllAtomSterics H  580
#contact E 96  AllAtomSterics E  117