Rxn ID "Rxn Eqn (whole reaction compartment [c] : , or individual metabolite compartments met[c])" "Regulation (logical, reaction allowed nonzero if statement is ture, genes by b####)" Gene metabolic class met subclass Comments 1 (regulation backup) Comments 2 Comment 3 Comments 4 GLK [c] : 1.0 atp + 1.0 glc-D ==> 1.0 adp + 1.0 g6p + 1.0 h on b2388 Metabolism Glycolysis/gluconeogenesis on " *EWB (no regulation given previously, assumed on)" on PGIR [c] : 1.0 g6p <==> 1.0 f6p on b4025 Metabolism Glycolysis/gluconeogenesis on " *EWB (no regulation given previously, assumed on)" on PFKA [c] : 1.0 atp + 1.0 f6p ==> 1.0 adp + 1.0 fdp + 1.0 h b3916 b3916 Metabolism Glycolysis/gluconeogenesis b3916 NEW ONES in Category 6 b3916 PFKB [c] : 1.0 atp + 1.0 f6p ==> 1.0 adp + 1.0 fdp + 1.0 h on b1723 Metabolism Glycolysis/gluconeogenesis on " *EWB (no regulation given previously, assumed on)" on FBP [c] : 1.0 fdp + 1.0 h2o ==> 1.0 f6p + 1.0 pi b4232 b4232 Metabolism Glycolysis/gluconeogenesis b4232 NEW ONES in Category 6 b4232 FBAR [c] : 1.0 fdp <==> 1.0 dhap + 1.0 g3p b2925 b2925 Metabolism Glycolysis/gluconeogenesis b2925 NEW ONES in Category 6 b2925 TPIAR [c] : 1.0 dhap <==> 1.0 g3p b3919 b3919 Metabolism Glycolysis/gluconeogenesis b3919 b3919 GAPAR [c] : 1.0 g3p + 1.0 nad + 1.0 pi <==> 1.0 13dpg + 1.0 h + 1.0 nadh b1779 b1779 Metabolism Glycolysis/gluconeogenesis b1779 NEW ONES in Category 6 b1779 PGKR [c] : 1.0 3pg + 1.0 atp <==> 1.0 13dpg + 1.0 adp b2926 b2926 Metabolism Glycolysis/gluconeogenesis b2926 NEW ONES in Category 6 b2926 GPMAR [c] : 1.0 2pg <==> 1.0 3pg b0755 b0755 Metabolism Glycolysis/gluconeogenesis b0755 NEW ONES in Category 6 b0755 GPMBR [c] : 1.0 2pg <==> 1.0 3pg on b4395 Metabolism Glycolysis/gluconeogenesis on " *EWB (no regulation given previously, assumed on)" on ENOR [c] : 1.0 2pg <==> 1.0 h2o + 1.0 pep b2779 b2779 Metabolism Glycolysis/gluconeogenesis b2779 b2779 PPSA [c] : 1.0 atp + 1.0 h2o + 1.0 pyr ==> 1.0 amp + 2.0 h + 1.0 pep + 1.0 pi b1702 b1702 Metabolism Glycolysis/gluconeogenesis b1702 NEW ONES in Category 6 b1702 PYKF [c] : 1.0 adp + 1.0 h + 1.0 pep ==> 1.0 atp + 1.0 pyr b1676 b1676 Metabolism Glycolysis/gluconeogenesis b1676 NEW ONES in Category 6 b1676 PYKA [c] : 1.0 adp + 1.0 h + 1.0 pep ==> 1.0 atp + 1.0 pyr on b1854 Metabolism Glycolysis/gluconeogenesis on " *EWB (no regulation given previously, assumed on)" on ACEE [c] : 1.0 coa + 1.0 nad + 1.0 pyr ==> 1.0 accoa + 1.0 co2 + 1.0 nadh b0114 AND b0115 AND b0116 b0114 AND b0115 AND b0116 Metabolism Glycolysis/gluconeogenesis b0114 AND b0115 AND b0116 Alon Changes b0114 AND b0115 AND b0116 ZWFR [c] : 1.0 g6p + 1.0 nadp <==> 1.0 6pgl + 1.0 h + 1.0 nadph on b1852 Metabolism Pentose Phosphate Cycle on " *EWB (no regulation given previously, assumed on)" on PGL [c] : 1.0 6pgl + 1.0 h2o ==> 1.0 6pgc + 1.0 h on b0767 Metabolism Pentose Phosphate Cycle on " *EWB (no regulation given previously, assumed on)" on GND [c] : 1.0 6pgc + 1.0 nadp ==> 1.0 co2 + 1.0 nadph + 1.0 ru5p-D on b2029 Metabolism Pentose Phosphate Cycle on " *EWB (no regulation given previously, assumed on)" on RPIAR [c] : 1.0 ru5p-D <==> 1.0 r5p on b2914 Metabolism Pentose Phosphate Cycle on " *EWB (no regulation given previously, assumed on)" * EWB reversed direction on RPIBR [c] : 1.0 ru5p-D <==> 1.0 r5p b4090 b4090 Metabolism Pentose Phosphate Cycle b4090 NEW ONES in Category 6 * EWB reversed direction b4090 RPER [c] : 1.0 ru5p-D <==> 1.0 xu5p-D on b3386 Metabolism Pentose Phosphate Cycle on " *EWB (no regulation given previously, assumed on)" on TKTA1R [c] : 1.0 g3p + 1.0 s7p <==> 1.0 r5p + 1.0 xu5p-D on b2935 Metabolism Pentose Phosphate Cycle on " *EWB (no regulation given previously, assumed on)" * EWB reversed direction on TKTA2R [c] : 1.0 f6p + 1.0 g3p <==> 1.0 e4p + 1.0 xu5p-D on b2935 Metabolism Pentose Phosphate Cycle on " *EWB (no regulation given previously, assumed on)" * EWB reversed direction on TALAR [c] : 1.0 e4p + 1.0 f6p <==> 1.0 g3p + 1.0 s7p on b2464 Metabolism Pentose Phosphate Cycle on " *EWB (no regulation given previously, assumed on)" * EWB reversed direction on TKTB1R [c] : 1.0 g3p + 1.0 s7p <==> 1.0 r5p + 1.0 xu5p-D on b2465 Metabolism Pentose Phosphate Cycle on " *EWB (no regulation given previously, assumed on)" * EWB reversed direction on TKTB2R [c] : 1.0 f6p + 1.0 g3p <==> 1.0 e4p + 1.0 xu5p-D on b2465 Metabolism Pentose Phosphate Cycle on " *EWB (no regulation given previously, assumed on)" * EWB reversed direction on TALBR [c] : 1.0 e4p + 1.0 f6p <==> 1.0 g3p + 1.0 s7p on b0008 Metabolism Pentose Phosphate Cycle on " *EWB (no regulation given previously, assumed on)" * EWB reversed direction on GLTA [c] : 1.0 accoa + 1.0 h2o + 1.0 oaa ==> 1.0 cit + 1.0 coa + 1.0 h b0720 b0720 Metabolism TCA cycle b0720 b0720 ACNAR [c] : 1.0 cit <==> 1.0 icit b1276 b1276 Metabolism TCA cycle b1276 Alon Changes b1276 ACNBR [c] : 1.0 cit <==> 1.0 icit b0118 b0118 Metabolism TCA cycle b0118 NEW ONES in Category 6 b0118 ICDAR [c] : 1.0 icit + 1.0 nadp <==> 1.0 akg + 1.0 co2 + 1.0 nadph b1136 b1136 Metabolism TCA cycle b1136 b1136 SUCA [c] : 1.0 akg + 1.0 coa + 1.0 nad ==> 1.0 co2 + 1.0 nadh + 1.0 succoa b0116 AND b0726 AND b0727 b0116 AND b0726 AND b0727 Metabolism TCA cycle b0116 AND b0726 AND b0727 NEW ONES in Category 6 b0116 AND b0726 AND b0727 SUCCR [c] : 1.0 adp + 1.0 pi + 1.0 succoa <==> 1.0 atp + 1.0 coa + 1.0 succ b0729 AND b0728 b0729 AND b0728 Metabolism TCA cycle b0729 AND b0728 * EWB reversed direction * EWB reversed direction b0729 AND b0728 SDHA1 [c] : 1.0 fad + 1.0 succ ==> 1.0 fadh2 + 1.0 fum b0721 AND b0722 AND b0723 AND b0724 b0721 AND b0722 AND b0723 AND b0724 Metabolism TCA cycle b0721 AND b0722 AND b0723 AND b0724 Alon Changes b0721 AND b0722 AND b0723 AND b0724 FUMAR [c] : 1.0 fum + 1.0 h2o <==> 1.0 mal-L b1612 b1612 Metabolism TCA cycle b1612 NEW ONES in Category 6 b1612 FUMBR [c] : 1.0 fum + 1.0 h2o <==> 1.0 mal-L b4122 b4122 Metabolism TCA cycle b4122 Alon Changes b4122 FUMCR [c] : 1.0 fum + 1.0 h2o <==> 1.0 mal-L b1611 b1611 Metabolism TCA cycle b1611 Alon Changes b1611 MDHR [c] : 1.0 mal-L + 1.0 nad <==> 1.0 h + 1.0 nadh + 1.0 oaa b3236 b3236 Metabolism TCA cycle b3236 NEW ONES in Category 6 b3236 DLD1R [c] : 1.0 lac-D + 1.0 nad <==> 1.0 h + 1.0 nadh + 1.0 pyr on b2133 Metabolism Pyruvate metabolism on " *EWB (no regulation given previously, assumed on)" on DLD2 [c] : 1.0 lac-D + 1.0 q8 ==> 1.0 pyr + 1.0 q8h2 on b2133 Metabolism Oxidative phosphorylation on " *EWB (no regulation given previously, assumed on)" on ADHER [c] : 1.0 accoa + 2.0 h + 2.0 nadh <==> 1.0 coa + 1.0 etoh + 2.0 nad b1241 b1241 Metabolism Pyruvate metabolism b1241 Alon Changes b1241 PFLA [c] : 1.0 coa + 1.0 pyr ==> 1.0 accoa + 1.0 for b0902 AND b0903 b0902 AND b0903 Metabolism Pyruvate metabolism b0902 AND b0903 Alon Changes b0902 AND b0903 PFLC [c] : 1.0 coa + 1.0 pyr ==> 1.0 accoa + 1.0 for b3951 AND b3952 b3951 AND b3952 Metabolism Pyruvate metabolism b3951 AND b3952 NEW ONES in Category 6 b3951 AND b3952 PTAR [c] : 1.0 accoa + 1.0 pi <==> 1.0 actp + 1.0 coa b2297 b2297 Metabolism Pyruvate metabolism b2297 b2297 ACKAR [c] : 1.0 ac + 1.0 atp <==> 1.0 actp + 1.0 adp b2296 b2296 Metabolism Pyruvate metabolism b2296 NEW ONES in Category 6 b2296 ACS [c] : 1.0 ac + 1.0 atp + 1.0 coa ==> 1.0 accoa + 1.0 amp + 1.0 ppi b4069 b4069 Metabolism Pyruvate metabolism b4069 Catabolite Repression from Paigen and Park b4069 PCKA [c] : 1.0 atp + 1.0 oaa ==> 1.0 adp + 1.0 co2 + 1.0 pep on b3403 Metabolism Central metabolism on " *EWB (no regulation given previously, assumed on)" on PPC [c] : 1.0 co2 + 1.0 h2o + 1.0 pep ==> 1.0 h + 1.0 oaa + 1.0 pi b3956 b3956 Metabolism Anaplerotic reactions b3956 b3956 MAEB [c] : 1.0 mal-L + 1.0 nadp ==> 1.0 co2 + 1.0 nadph + 1.0 pyr b2463 b2463 Metabolism Anaplerotic reactions b2463 NEW ONES in Category 6 b2463 SFCA [c] : 1.0 mal-L + 1.0 nad ==> 1.0 co2 + 1.0 nadh + 1.0 pyr on b1479 Metabolism Anaplerotic reactions on " *EWB (no regulation given previously, assumed on)" on ACEA [c] : 1.0 icit ==> 1.0 glx + 1.0 succ b4015 b4015 Metabolism Anaplerotic reactions b4015 Alon Changes b4015 ACEB [c] : 1.0 accoa + 1.0 glx + 1.0 h2o ==> 1.0 coa + 1.0 h + 1.0 mal-L b4014 b4014 Metabolism Anaplerotic reactions b4014 Alon Changes b4014 PPA [c] : 1.0 h2o + 1.0 ppi ==> 1.0 h + 2.0 pi on b4226 Metabolism Anaplerotic reactions on " *EWB (no regulation given previously, assumed on)" on GLPK [c] : 1.0 atp + 1.0 glyc ==> 1.0 adp + 1.0 glyc3p + 1.0 h b3926 b3926 Metabolism Alternate carbon metabolism b3926 Catabolite Repression from Paigen and Park b3926 GPSAR [c] : 1.0 glyc3p + 1.0 nadp <==> 1.0 dhap + 1.0 h + 1.0 nadph on b3608 Metabolism Alternate carbon metabolism on " *EWB (no regulation given previously, assumed on)" on RBSK [c] : 1.0 atp + 1.0 rib-D ==> 1.0 adp + 1.0 h + 1.0 r5p b3752 b3752 Metabolism Alternate carbon metabolism b3752 Catabolite Repression from Paigen and Park b3752 NUOA 4.5 h[c] + 1.0 nadh[c] + 1.0 q8[c] ==> 1.0 nad[c] + 1.0 q8h2[c] + 3.5 H[e] b2279 AND b2277 AND b2284 AND b2282 AND b2278 AND b2288 AND b2276 AND b2287 AND b2283 AND b2281 AND b2286 AND b2280 AND b2285 b2279 AND b2277 AND b2284 AND b2282 AND b2278 AND b2288 AND b2276 AND b2287 AND b2283 AND b2281 AND b2286 AND b2280 AND b2285 Metabolism Oxidative phosphorylation b2279 AND b2277 AND b2284 AND b2282 AND b2278 AND b2288 AND b2276 AND b2287 AND b2283 AND b2281 AND b2286 AND b2280 AND b2285 Alon Changes b2279 AND b2277 AND b2284 AND b2282 AND b2278 AND b2288 AND b2276 AND b2287 AND b2283 AND b2281 AND b2286 AND b2280 AND b2285 NDH [c] : 1.0 h + 1.0 nadh + 1.0 q8 ==> 1.0 nad + 1.0 q8h2 b1109 b1109 Metabolism Oxidative phosphorylation b1109 NEW ONES in Category 6 b1109 FDOH 1.0 for[c] + 3.0 h[c] + 1.0 q8[c] ==> 1.0 co2[c] + 1.0 q8h2[c] + 2.0 H[e] on b3893 AND b3892 AND b3894 AND b1474 AND b1475 AND b1476 Metabolism Oxidative phosphorylation on " *EWB (no regulation given previously, assumed on)" on FDNG 1.0 for[c] + 3.0 h[c] + 1.0 q8[c] ==> 1.0 co2[c] + 1.0 q8h2[c] + 2.0 H[e] b1474 AND b1476 AND b1475 b1474 AND b1476 AND b1475 Metabolism Oxidative phosphorylation b1474 AND b1476 AND b1475 Alon Changes b1474 AND b1476 AND b1475 GLPD [c] : 1.0 glyc3p + 1.0 q8 ==> 1.0 dhap + 1.0 q8h2 b3426 b3426 Metabolism Oxidative phosphorylation b3426 Catabolite Repression from Paigen and Park b3426 GLPA [c] : 1.0 glyc3p + 1.0 q8 ==> 1.0 dhap + 1.0 q8h2 b2243 AND b2242 AND b2241 b2243 AND b2242 AND b2241 Metabolism Oxidative phosphorylation b2243 AND b2242 AND b2241 Catabolite Repression from Paigen and Park b2243 AND b2242 AND b2241 CYOA 2.5 h[c] + 0.5 o2[c] + 1.0 q8h2[c] ==> 1.0 h2o[c] + 1.0 q8[c] + 2.5 H[e] b0432 AND b0431 AND b0429 AND b0430 b0432 AND b0431 AND b0429 AND b0430 Metabolism Oxidative phosphorylation b0432 AND b0431 AND b0429 AND b0430 NEW ONES in Category 6 b0432 AND b0431 AND b0429 AND b0430 CYDA 2.0 h[c] + 0.5 o2[c] + 1.0 q8h2[c] ==> 1.0 h2o[c] + 1.0 q8[c] + 2.0 H[e] b0734 AND b0733 b0734 AND b0733 Metabolism Oxidative phosphorylation b0734 AND b0733 NEW ONES in Category 6 b0734 AND b0733 SDHA2R [c] : 1.0 fadh2 + 1.0 q8 <==> 1.0 fad + 1.0 q8h2 b0723 b0723 Metabolism Oxidative phosphorylation b0723 Alon Changes b0723 PNT1A [c] : 1.0 nad + 1.0 nadph ==> 1.0 nadh + 1.0 nadp on b1603 AND b1602 Metabolism Oxidative phosphorylation on " *EWB (no regulation given previously, assumed on)" on PNT2A 1.0 nadh[c] + 1.0 nadp[c] + 2.0 H[e] ==> 2.0 h[c] + 1.0 nad[c] + 1.0 nadph[c] on b1603 AND b1602 Metabolism Oxidative phosphorylation on " *EWB (no regulation given previously, assumed on)" on ATPAR 1.0 adp[c] + 1.0 pi[c] + 4.0 H[e] <==> 1.0 atp[c] + 3.0 h[c] + 1.0 h2o[c] on b0928 AND b3738 AND b3731 AND b3732 AND b3737 AND b3736 AND b3733 AND b3735 Metabolism Oxidative phosphorylation on " *EWB (no regulation given previously, assumed on)" on GLCUP 1.0 GLC[e] + 1.0 H[e] ==> 1.0 glc-D[c] + 1.0 h[c] b2943 b2943 Transporters b2943 NEW ONES in Category 6 b2943 GLCPTS 1.0 pep[c] + 1.0 GLC[e] ==> 1.0 g6p[c] + 1.0 pyr[c] b1101 AND b2415 AND b2416 AND b2417 b1101 AND b2415 AND b2416 AND b2417 Metabolism ? b1101 AND b2415 AND b2416 AND b2417 NEW ONES in Category 6 b1101 AND b2415 AND b2416 AND b2417 GLUPR 1.0 glyc[c] <==> 1.0 GL[e] on b3927 Metabolism ? on " *EWB (no regulation given previously, assumed on)" "*EWB set compartment of reactant to [c], check this" on RIBUP 1.0 atp[c] + 1.0 h2o[c] + 1.0 RIB[e] ==> 1.0 adp[c] + 1.0 h[c] + 1.0 pi[c] + 1.0 rib-D[c] b3748 AND b3749 AND b3750 AND b3751 b3748 AND b3749 AND b3750 AND b3751 Metabolism ? b3748 AND b3749 AND b3750 AND b3751 Catabolite Repression from Paigen and Park b3748 AND b3749 AND b3750 AND b3751 ACUPR 1.0 AC[e] + 1.0 H[e] <==> 1.0 ac[c] + 1.0 h[c] on Metabolism ? on " *EWB (no regulation given previously, assumed on)" on LACUPR 1.0 H[e] + 1.0 LAC[e] <==> 1.0 h[c] + 1.0 lac-D[c] on b2975 OR b3603 Metabolism ? on " *EWB (no regulation given previously, assumed on)" on FORUPR 1.0 FOR[e] <==> 1.0 for[c] b0904 b0904 Metabolism ? b0904 Alon Changes b0904 ETHUPR 1.0 ETH[e] + 1.0 H[e] <==> 1.0 etoh[c] + 1.0 h[c] on Metabolism ? on " *EWB (no regulation given previously, assumed on)" on DCTA1 2.0 H[e] + 1.0 SUCC[e] ==> 2.0 h[c] + 1.0 succ[c] b3528 b3528 Metabolism ? b3528 Catabolite Repression from Paigen and Park b3528 DCUB1 3.0 H[e] + 1.0 SUCC[e] ==> 3.0 h[c] + 1.0 succ[c] b4123 b4123 Metabolism ? b4123 Catabolite Repression from Paigen and Park b4123 DCUA1 3.0 H[e] + 1.0 SUCC[e] ==> 3.0 h[c] + 1.0 succ[c] on b4138 Metabolism ? on " *EWB (no regulation given previously, assumed on)" on DCUC1 1.0 h[c] + 1.0 succ[c] ==> 1.0 H[e] + 1.0 SUCC[e] b0621 b0621 Metabolism ? b0621 NEW ONES in Category 6 b0621 PYRUPR 1.0 H[e] + 1.0 PYR[e] <==> 1.0 h[c] + 1.0 pyr[c] on Metabolism ? on " *EWB (no regulation given previously, assumed on)" on PIUP2R 1.0 H[e] + 1.0 PI[e] <==> 1.0 h[c] + 1.0 pi[c] on b3493 OR b2987 Metabolism ? on " *EWB (no regulation given previously, assumed on)" on O2TXR 1.0 O2[e] <==> 1.0 o2[c] on Metabolism ? on " *EWB (no regulation given previously, assumed on)" on CO2TXR 1.0 CO2[e] <==> 1.0 co2[c] on Metabolism ? on " *EWB (no regulation given previously, assumed on)" on ATPM [c] : 1.0 atp + 1.0 h2o ==> 1.0 adp + 1.0 h + 1.0 pi on Metabolism Oxidative phosphorylation on " *EWB (no regulation given previously, assumed on)" on ADK1R [c] : 1.0 amp + 1.0 atp <==> 2.0 adp on b0474 Metabolism Oxidative phosphorylation on " *EWB (no regulation given previously, assumed on)" on LACYR 1.0 H[e] + 1.0 LCTS[e] <==> 1.0 h[c] + 1.0 lcts[c] b0343 b0343 Metabolism ? b0343 Catabolite Repression from Paigen and Park b0343 LACZ [c] : 1.0 h2o + 1.0 lcts ==> 1.0 gal + 1.0 glc-D b0344 b0344 Metabolism Alternate carbon metabolism b0344 Catabolite Repression from Paigen and Park b0344 GALKR [c] : 1.0 atp + 1.0 gal <==> 1.0 adp + 1.0 gal1p + 1.0 h b0757 b0757 Metabolism Alternate carbon metabolism b0757 Alon Changes b0757 GALER [c] : 1.0 udpg <==> 1.0 udpgal b0759 b0759 Metabolism Alternate carbon metabolism b0759 Alon Changes b0759 PGMR [c] : 1.0 g6p <==> 1.0 g1p on b0688 Metabolism Alternate carbon metabolism on " *EWB (no regulation given previously, assumed on)" * EWB reversed direction on ASPC1R [c] : 1.0 glu-L + 1.0 oaa <==> 1.0 akg + 1.0 asp-L on b0928 Amino Acid Aspartate and Asparagine on " *EWB (no regulation given previously, assumed on)" * EWB reversed direction on ASNB1 [c] : 1.0 asp-L + 1.0 atp + 1.0 gln-L + 1.0 h2o ==> 1.0 amp + 1.0 asn-L + 1.0 glu-L + 1.0 h + 1.0 ppi on b0674 Amino Acid Aspartate and Asparagine on " *EWB (no regulation given previously, assumed on)" on ASNA1 [c] : 1.0 asp-L + 1.0 atp + 1.0 nh4 ==> 1.0 amp + 1.0 asn-L + 1.0 h + 1.0 ppi b3744 b3744 Amino Acid Aspartate and Asparagine b3744 Alon Changes b3744 ASNUP1R 1.0 ASN[e] + 1.0 H[e] <==> 1.0 asn-L[c] + 1.0 h[c] on b1453 Amino Acid Aspartate and Asparagine on " *EWB (no regulation given previously, assumed on)" on ASNUP2 1.0 atp[c] + 1.0 h2o[c] + 1.0 ASN[e] ==> 1.0 adp[c] + 1.0 asn-L[c] + 1.0 h[c] + 1.0 pi[c] on Amino Acid Aspartate and Asparagine on " *EWB (no regulation given previously, assumed on)" on ASPUP1 1.0 ASP[e] + 1.0 H[e] ==> 1.0 asp-L[c] + 1.0 h[c] on b4077 OR b3528 Amino Acid Aspartate and Asparagine on " *EWB (no regulation given previously, assumed on)" on ASPUP2 1.0 atp[c] + 1.0 h2o[c] + 1.0 ASP[e] ==> 1.0 adp[c] + 1.0 asp-L[c] + 1.0 h[c] + 1.0 pi[c] b0652 AND b0653 AND b0654 AND b0655 b0652 AND b0653 AND b0654 AND b0655 Amino Acid Aspartate and Asparagine b0652 AND b0653 AND b0654 AND b0655 Amino Acids b0652 AND b0653 AND b0654 AND b0655 ANSA [c] : 1.0 asn-L + 1.0 h2o ==> 1.0 asp-L + 1.0 nh4 on b1767 Amino Acid Aspartate and Asparagine on " *EWB (no regulation given previously, assumed on)" on ANSB [c] : 1.0 asn-L + 1.0 h2o ==> 1.0 asp-L + 1.0 nh4 b2957 b2957 Amino Acid Aspartate and Asparagine b2957 Amino Acids b2957 ASPA [c] : 1.0 asp-L ==> 1.0 fum + 1.0 nh4 b4139 b4139 Amino Acid Aspartate and Asparagine b4139 Amino Acids b4139 DCUB2 1.0 ASP[e] + 3.0 H[e] ==> 1.0 asp-L[c] + 3.0 h[c] b4123 b4123 Amino Acid Aspartate and Asparagine b4123 Catabolite Repression from Paigen and Park b4123 DCUA2 1.0 ASP[e] + 3.0 H[e] ==> 1.0 asp-L[c] + 3.0 h[c] on b4138 Amino Acid Aspartate and Asparagine on " *EWB (no regulation given previously, assumed on)" on DCTA2 1.0 ASP[e] + 2.0 H[e] ==> 1.0 asp-L[c] + 2.0 h[c] b3528 b3528 Amino Acid Aspartate and Asparagine b3528 Catabolite Repression from Paigen and Park b3528 GDHAR [c] : 1.0 glu-L + 1.0 h2o + 1.0 nadp <==> 1.0 akg + 1.0 h + 1.0 nadph + 1.0 nh4 b1761 b1761 Amino Acid Aspartate and Asparagine b1761 Amino Acids b1761 GLNA [c] : 1.0 atp + 1.0 glu-L + 1.0 nh4 ==> 1.0 adp + 1.0 gln-L + 1.0 h + 1.0 pi b3870 b3870 Amino Acid Aspartate and Asparagine b3870 Alon Changes b3870 GLTB [c] : 1.0 akg + 1.0 gln-L + 1.0 h + 1.0 nadph ==> 2.0 glu-L + 1.0 nadp b3213 AND b3212 b3213 AND b3212 Amino Acid Aspartate and Asparagine b3213 AND b3212 Amino Acids b3213 AND b3212 GLTPR 1.0 GLU[e] + 1.0 H[e] <==> 1.0 glu-L[c] + 1.0 h[c] on b4077 Amino Acid Aspartate and Asparagine on " *EWB (no regulation given previously, assumed on)" on GLTS 1.0 GLU[e] + 1.0 NA[e] ==> 1.0 glu-L[c] + 1.0 na1[c] b3653 b3653 Amino Acid Aspartate and Asparagine b3653 Amino Acids b3653 GADA [c] : 1.0 glu-L + 1.0 h ==> 1.0 4abut + 1.0 co2 b3517 b3517 Amino Acid Aspartate and Asparagine b3517 Amino Acids b3517 GADB [c] : 1.0 glu-L + 1.0 h ==> 1.0 4abut + 1.0 co2 b1493 b1493 Amino Acid Aspartate and Asparagine b1493 Amino Acids b1493 GLTJKLI 1.0 atp[c] + 1.0 h2o[c] + 1.0 GLU[e] ==> 1.0 adp[c] + 1.0 glu-L[c] + 1.0 h[c] + 1.0 pi[c] b0652 AND b0653 AND b0654 AND b0655 b0652 AND b0653 AND b0654 AND b0655 Amino Acid Aspartate and Asparagine b0652 AND b0653 AND b0654 AND b0655 Amino Acids b0652 AND b0653 AND b0654 AND b0655 GLNHPQ 1.0 atp[c] + 1.0 h2o[c] + 1.0 GLN[e] ==> 1.0 adp[c] + 1.0 gln-L[c] + 1.0 h[c] + 1.0 pi[c] on b0811 AND b0810 AND b0809 Amino Acid Aspartate and Asparagine on " *EWB (no regulation given previously, assumed on)" on YNEH [c] : 1.0 gln-L + 1.0 h2o ==> 1.0 glu-L + 1.0 nh4 b1524 b1524 Amino Acid Aspartate and Asparagine b1524 Amino Acids b1524 YBAS [c] : 1.0 gln-L + 1.0 h2o ==> 1.0 glu-L + 1.0 nh4 on b0485 Amino Acid Aspartate and Asparagine on " *EWB (no regulation given previously, assumed on)" on ILVA [c] : 1.0 thr-L ==> 1.0 2obut + 1.0 nh4 on b3772 Amino Acid Branched-Chain Amino Acids on " *EWB (no regulation given previously, assumed on)" on ILVB1 [c] : 1.0 2obut + 1.0 h + 1.0 pyr ==> 1.0 2ahbut + 1.0 co2 b3670 AND b3671 b3670 AND b3671 Amino Acid Branched-Chain Amino Acids b3670 AND b3671 Amino Acids b3670 AND b3671 ILVG1 [c] : 1.0 2obut + 1.0 h + 1.0 pyr ==> 1.0 2ahbut + 1.0 co2 b3769 AND b3768 AND b3767 b3769 AND b3768 AND b3767 Amino Acid Branched-Chain Amino Acids b3769 AND b3768 AND b3767 Amino Acids b3769 AND b3768 AND b3767 ILVI1 [c] : 1.0 2obut + 1.0 h + 1.0 pyr ==> 1.0 2ahbut + 1.0 co2 b0077 AND b0078 b0077 AND b0078 Amino Acid Branched-Chain Amino Acids b0077 AND b0078 Amino Acids b0077 AND b0078 ILVC1 [c] : 1.0 2ahbut + 1.0 h + 1.0 nadph ==> 1.0 23dhmp + 1.0 nadp b3774 b3774 Amino Acid Branched-Chain Amino Acids b3774 Amino Acids b3774 ILVD1 [c] : 1.0 23dhmp ==> 1.0 3mop + 1.0 h2o b3771 b3771 Amino Acid Branched-Chain Amino Acids b3771 b3771 ILVE1R [c] : 1.0 3mop + 1.0 glu-L <==> 1.0 akg + 1.0 ile-L b3770 b3770 Amino Acid Branched-Chain Amino Acids b3770 * EWB reversed direction b3770 ILVB2 [c] : 1.0 h + 2.0 pyr ==> 1.0 alac-S + 1.0 co2 b3670 AND b3671 b3670 AND b3671 Amino Acid Branched-Chain Amino Acids b3670 AND b3671 "The Rest section in the Excel sheet MWC March 29, 2003" b3670 AND b3671 ILVG2 [c] : 1.0 h + 2.0 pyr ==> 1.0 alac-S + 1.0 co2 b3769 AND b3768 AND b3767 b3769 AND b3768 AND b3767 Amino Acid Branched-Chain Amino Acids b3769 AND b3768 AND b3767 "The Rest section in the Excel sheet MWC March 29, 2003" b3769 AND b3768 AND b3767 ILVI2 [c] : 1.0 h + 2.0 pyr ==> 1.0 alac-S + 1.0 co2 b0077 AND b0078 b0077 AND b0078 Amino Acid Branched-Chain Amino Acids b0077 AND b0078 "The Rest section in the Excel sheet MWC March 29, 2003" b0077 AND b0078 ILVC2 [c] : 1.0 alac-S + 1.0 h + 1.0 nadph ==> 1.0 23dhmb + 1.0 nadp b3774 b3774 Amino Acid Branched-Chain Amino Acids b3774 "The Rest section in the Excel sheet MWC March 29, 2003" b3774 ILVD2 [c] : 1.0 23dhmb ==> 1.0 3mob + 1.0 h2o b3771 b3771 Amino Acid Branched-Chain Amino Acids b3771 b3771 ILVE2R [c] : 1.0 3mob + 1.0 glu-L <==> 1.0 akg + 1.0 val-L b3770 b3770 Amino Acid Branched-Chain Amino Acids b3770 NEW ONES in Category 6 * EWB reverersed direction b3770 LEUA [c] : 1.0 3mob + 1.0 accoa + 1.0 h2o ==> 1.0 3c3hmp + 1.0 coa + 1.0 h b0074 b0074 Amino Acid Branched-Chain Amino Acids b0074 Amino Acids b0074 LEUCR [c] : 1.0 3c2hmp <==> 1.0 2ippm + 1.0 h2o b0071 AND b0072 b0071 AND b0072 Amino Acid Branched-Chain Amino Acids b0071 AND b0072 Amino Acids b0071 AND b0072 LEUB [c] : 1.0 3c2hmp + 1.0 nad ==> 1.0 3c4mop + 1.0 h + 1.0 nadh b0073 b0073 Amino Acid Branched-Chain Amino Acids b0073 Amino Acids b0073 ILVE4 [c] : 1.0 4mop + 1.0 glu-L ==> 1.0 akg + 1.0 leu-L b3770 b3770 Amino Acid Branched-Chain Amino Acids b3770 NEW ONES in Category 6 b3770 TYRB [c] : 1.0 4mop + 1.0 glu-L ==> 1.0 akg + 1.0 leu-L b4054 b4054 Amino Acid Branched-Chain Amino Acids b4054 "The Rest section in the Excel sheet MWC March 29, 2003" b4054 BCAAUP1R 1.0 H[e] + 1.0 LEU[e] <==> 1.0 h[c] + 1.0 leu-L[c] on b0401 Amino Acid Branched-Chain Amino Acids b0401 NEW ONES in Category 6 * EWB removed regulation to allow growth on rich media on BCAAUP2R 1.0 H[e] + 1.0 ILE[e] <==> 1.0 h[c] + 1.0 ile-L[c] on b0401 Amino Acid Branched-Chain Amino Acids b0401 NEW ONES in Category 6 * EWB removed regulation to allow growth on rich media on BCAAUP3R 1.0 H[e] + 1.0 VAL[e] <==> 1.0 h[c] + 1.0 val-L[c] on b0401 Amino Acid Branched-Chain Amino Acids b0401 NEW ONES in Category 6 * EWB removed regulation to allow growth on rich media on ILEUP 1.0 atp[c] + 1.0 h2o[c] + 1.0 ILE[e] ==> 1.0 adp[c] + 1.0 h[c] + 1.0 ile-L[c] + 1.0 pi[c] b3454 AND b3455 AND b3456 AND b3457 AND b3460 b3454 AND b3455 AND b3456 AND b3457 AND b3460 Amino Acid Branched-Chain Amino Acids b3454 AND b3455 AND b3456 AND b3457 AND b3460 Amino Acids b3454 AND b3455 AND b3456 AND b3457 AND b3460 LEUUP 1.0 atp[c] + 1.0 h2o[c] + 1.0 LEU[e] ==> 1.0 adp[c] + 1.0 h[c] + 1.0 leu-L[c] + 1.0 pi[c] b3454 AND b3455 AND b3456 AND b3457 AND b3460 b3454 AND b3455 AND b3456 AND b3457 AND b3460 Amino Acid Branched-Chain Amino Acids b3454 AND b3455 AND b3456 AND b3457 AND b3460 Amino Acids b3454 AND b3455 AND b3456 AND b3457 AND b3460 LEUUP2 1.0 atp[c] + 1.0 h2o[c] + 1.0 LEU[e] ==> 1.0 adp[c] + 1.0 h[c] + 1.0 leu-L[c] + 1.0 pi[c] b3454 AND b3455 AND b3456 AND b3457 AND b3458 b3454 AND b3455 AND b3456 AND b3457 AND b3458 Amino Acid Branched-Chain Amino Acids b3454 AND b3455 AND b3456 AND b3457 AND b3458 Amino Acids b3454 AND b3455 AND b3456 AND b3457 AND b3458 VALUP 1.0 atp[c] + 1.0 h2o[c] + 1.0 VAL[e] ==> 1.0 adp[c] + 1.0 h[c] + 1.0 pi[c] + 1.0 val-L[c] b3454 AND b3455 AND b3456 AND b3457 AND b3460 b3454 AND b3455 AND b3456 AND b3457 AND b3460 Amino Acid Branched-Chain Amino Acids b3454 AND b3455 AND b3456 AND b3457 AND b3460 Amino Acids b3454 AND b3455 AND b3456 AND b3457 AND b3460 ALABR [c] : 1.0 glu-L + 1.0 pyr <==> 1.0 akg + 1.0 ala-L on Amino Acid Alanine Metabolism on " *EWB (no regulation given previously, assumed on)" * EWB switched Ddrirection on AVTA1 [c] : 1.0 3mob + 1.0 ala-L ==> 1.0 pyr + 1.0 val-L b3572 b3572 Amino Acid Alanine Metabolism b3572 Amino Acids b3572 ALR_R [c] : 1.0 ala-L <==> 1.0 ala-D on b4053 Amino Acid Alanine Metabolism on " *EWB (no regulation given previously, assumed on)" on DADX [c] : 1.0 ala-L ==> 1.0 ala-D b1190 b1190 Amino Acid Alanine Metabolism b1190 Amino Acids b1190 ALAUP 1.0 atp[c] + 1.0 h2o[c] + 1.0 ALA[e] ==> 1.0 adp[c] + 1.0 ala-L[c] + 1.0 h[c] + 1.0 pi[c] b3454 AND b3455 AND b3456 AND b3457 AND b3460 b3454 AND b3455 AND b3456 AND b3457 AND b3460 Amino Acid Alanine Metabolism b3454 AND b3455 AND b3456 AND b3457 AND b3460 Amino Acids b3454 AND b3455 AND b3456 AND b3457 AND b3460 DADA [c] : 1.0 ala-D + 1.0 fad + 1.0 h2o ==> 1.0 fadh2 + 1.0 nh4 + 1.0 pyr b1189 b1189 Amino Acid Alanine Metabolism b1189 Amino Acids b1189 ARGA [c] : 1.0 accoa + 1.0 glu-L ==> 1.0 acglu + 1.0 coa + 1.0 h on b2818 Amino Acid "Arginine, Spermidine, etc." b2818 Amino Acids b2818 ARGB [c] : 1.0 acglu + 1.0 atp ==> 1.0 acg5p + 1.0 adp on b3959 Amino Acid "Arginine, Spermidine, etc." b3959 Amino Acids b3959 ARGCR [c] : 1.0 acg5sa + 1.0 nadp + 1.0 pi <==> 1.0 acg5p + 1.0 h + 1.0 nadph on b3958 Amino Acid "Arginine, Spermidine, etc." b3958 Amino Acids b3958 ARGDR [c] : 1.0 acorn + 1.0 akg <==> 1.0 acg5sa + 1.0 glu-L on b3359 Amino Acid "Arginine, Spermidine, etc." b3359 Amino Acids b3359 ARGE1 [c] : 1.0 acorn + 1.0 h2o ==> 1.0 ac + 1.0 orn on b3957 Amino Acid "Arginine, Spermidine, etc." b3957 Amino Acids b3957 CARA [c] : 2.0 atp + 1.0 gln-L + 1.0 h2o + 1.0 hco3 ==> 2.0 adp + 1.0 cbp + 1.0 glu-L + 2.0 h + 1.0 pi b0032 AND b0033 b0032 AND b0033 Amino Acid "Arginine, Spermidine, etc." b0032 AND b0033 Amino Acids b0032 AND b0033 ARGFR [c] : 1.0 cbp + 1.0 orn <==> 1.0 citr-L + 1.0 h + 1.0 pi on b0273 Amino Acid "Arginine, Spermidine, etc." b0273 Amino Acids b0273 ARGIR [c] : 1.0 cbp + 1.0 orn <==> 1.0 citr-L + 1.0 h + 1.0 pi on b4254 Amino Acid "Arginine, Spermidine, etc." b4254 Amino Acids b4254 YGJG [c] : 1.0 akg + 1.0 ptrc ==> 1.0 glu-L + 1.0 4abutn on b3073 Amino Acid "Arginine, Spermidine, etc." on " *EWB (no regulation given previously, assumed on)" on ARGG [c] : 1.0 asp-L + 1.0 atp + 1.0 citr-L ==> 1.0 amp + 1.0 argsuc + 1.0 h + 1.0 ppi on b3172 Amino Acid "Arginine, Spermidine, etc." on " *EWB (no regulation given previously, assumed on)" on ARGHR [c] : 1.0 argsuc <==> 1.0 arg-L + 1.0 fum on b3960 Amino Acid "Arginine, Spermidine, etc." b3960 Amino Acids b3960 ARGUP 1.0 atp[c] + 1.0 h2o[c] + 1.0 ARG[e] ==> 1.0 adp[c] + 1.0 arg-L[c] + 1.0 h[c] + 1.0 pi[c] b2306 AND b2307 AND b2308 AND b2310 b2306 AND b2307 AND b2308 AND b2310 Amino Acid "Arginine, Spermidine, etc." b2306 AND b2307 AND b2308 AND b2310 Amino Acids b2306 AND b2307 AND b2308 AND b2310 ARGUP2 1.0 atp[c] + 1.0 h2o[c] + 1.0 ARG[e] ==> 1.0 adp[c] + 1.0 arg-L[c] + 1.0 h[c] + 1.0 pi[c] b0860 AND b0861 AND b0862 AND b0864 b0860 AND b0861 AND b0862 AND b0864 Amino Acid "Arginine, Spermidine, etc." b0860 AND b0861 AND b0862 AND b0864 NEW ONES in Category 6 b0860 AND b0861 AND b0862 AND b0864 SPEA [c] : 1.0 arg-L + 1.0 h ==> 1.0 agm + 1.0 co2 b2938 b2938 Amino Acid "Arginine, Spermidine, etc." b2938 Alon Changes b2938 ADIA [c] : 1.0 arg-L + 1.0 h ==> 1.0 agm + 1.0 co2 b4117 b4117 Amino Acid "Arginine, Spermidine, etc." b4117 Catabolite Repression from Paigen and Park b4117 SPEB [c] : 1.0 agm + 1.0 h2o ==> 1.0 ptrc + 1.0 urea on b2937 Amino Acid "Arginine, Spermidine, etc." on " *EWB (no regulation given previously, assumed on)" on SPEC [c] : 1.0 h + 1.0 orn ==> 1.0 co2 + 1.0 ptrc b2965 b2965 Amino Acid "Arginine, Spermidine, etc." b2965 Alon Changes b2965 SPEF [c] : 1.0 h + 1.0 orn ==> 1.0 co2 + 1.0 ptrc on b0693 Amino Acid "Arginine, Spermidine, etc." on " *EWB (no regulation given previously, assumed on)" on SPEDR [c] : 1.0 amet + 1.0 h <==> 1.0 ametam + 1.0 co2 on b0120 Amino Acid "Arginine, Spermidine, etc." on " *EWB (no regulation given previously, assumed on)" on SPEE [c] : 1.0 ametam + 1.0 ptrc ==> 1.0 5mta + 1.0 h + 1.0 spmd on b0121 Amino Acid "Arginine, Spermidine, etc." on " *EWB (no regulation given previously, assumed on)" on MTN1 [c] : 1.0 5mta + 1.0 h2o ==> 1.0 5mtr + 1.0 ade on b0159 Amino Acid "Arginine, Spermidine, etc." on " *EWB (no regulation given previously, assumed on)" on MTHRKN [c] : 1.0 5mtr + 1.0 atp ==> 1.0 5mdr1p + 1.0 adp + 1.0 h on Amino Acid "Arginine, Spermidine, etc." on " *EWB (no regulation given previously, assumed on)" on MTHIPISR [c] : 1.0 5mdr1p <==> 1.0 5mdru1p on Amino Acid "Arginine, Spermidine, etc." on " *EWB (no regulation given previously, assumed on)" on NE1PH [c] : 1.0 5mdru1p ==> 1.0 dkmpp + 1.0 h2o on Amino Acid "Arginine, Spermidine, etc." on " *EWB (no regulation given previously, assumed on)" on NE3UNK [c] : 1.0 dkmpp + 3.0 h2o ==> 1.0 2kmb + 1.0 for + 6.0 h + 1.0 pi on Amino Acid "Arginine, Spermidine, etc." on " *EWB (no regulation given previously, assumed on)" on NE3UNK2 [c] : 1.0 dkmpp + 1.0 h2o + 1.0 o2 ==> 1.0 2kmb + 1.0 for + 2.0 h + 1.0 pi on Amino Acid "Arginine, Spermidine, etc." on " *EWB (no regulation given previously, assumed on)" on TNSUNK [c] : 1.0 2kmb + 1.0 glu-L ==> 1.0 akg + 1.0 met-L on Amino Acid "Arginine, Spermidine, etc." on " *EWB (no regulation given previously, assumed on)" on PTRSCUP 1.0 atp[c] + 1.0 h2o[c] + 1.0 PTRC[e] ==> 1.0 adp[c] + 1.0 h[c] + 1.0 pi[c] + 1.0 ptrc[c] b0854 AND b0855 AND b0856 AND b0857 b0854 AND b0855 AND b0856 AND b0857 Amino Acid "Arginine, Spermidine, etc." b0854 AND b0855 AND b0856 AND b0857 NEW ONES in Category 6 b0854 AND b0855 AND b0856 AND b0857 SPMDUP1 1.0 atp[c] + 1.0 h2o[c] + 1.0 SPMD[e] ==> 1.0 adp[c] + 1.0 h[c] + 1.0 pi[c] + 1.0 spmd[c] on b1126 AND b1125 AND b1124 AND b1123 Amino Acid "Arginine, Spermidine, etc." on " *EWB (no regulation given previously, assumed on)" on SPRDUP2 1.0 atp[c] + 1.0 h2o[c] + 1.0 PTRC[e] ==> 1.0 adp[c] + 1.0 h[c] + 1.0 pi[c] + 1.0 ptrc[c] on (b1126 AND b1125 AND b1124 AND b1123) OR (b1123 AND b0856 AND b0855 AND b0854) Amino Acid "Arginine, Spermidine, etc." on " *EWB (no regulation given previously, assumed on)" on PAT [c] : 1.0 akg + 1.0 ptrc ==> 1.0 4abutn + 1.0 glu-L on b3073 Amino Acid "Arginine, Spermidine, etc." on " *EWB (no regulation given previously, assumed on)" on PRR_ [c] : 1.0 4abutn + 1.0 h2o + 1.0 nad ==> 1.0 4abut + 2.0 h + 1.0 nadh on b1444 Amino Acid "Arginine, Spermidine, etc." on " *EWB (no regulation given previously, assumed on)" on ALDH3 [c] : 1.0 4abutn + 1.0 h2o + 1.0 nad ==> 1.0 4abut + 2.0 h + 1.0 nadh on b1300 Amino Acid "Arginine, Spermidine, etc." on " *EWB (no regulation given previously, assumed on)" on GABT [c] : 1.0 4abut + 1.0 akg ==> 1.0 glu-L + 1.0 sucsal on b2662 Amino Acid "Arginine, Spermidine, etc." on " *EWB (no regulation given previously, assumed on)" on GOAG [c] : 1.0 4abut + 1.0 akg ==> 1.0 glu-L + 1.0 sucsal on b1302 Amino Acid "Arginine, Spermidine, etc." on " *EWB (no regulation given previously, assumed on)" on SAD [c] : 1.0 h2o + 1.0 nad + 1.0 sucsal ==> 2.0 h + 1.0 nadh + 1.0 succ on b1525 Amino Acid "Arginine, Spermidine, etc." on " *EWB (no regulation given previously, assumed on)" on GABD [c] : 1.0 h2o + 1.0 nadp + 1.0 sucsal ==> 2.0 h + 1.0 nadph + 1.0 succ on b2661 Amino Acid "Arginine, Spermidine, etc." on " *EWB (no regulation given previously, assumed on)" on ASTA [c] : 1.0 arg-L + 1.0 succoa ==> 1.0 coa + 1.0 h + 1.0 sucarg b1747 b1747 Amino Acid "Arginine, Spermidine, etc." b1747 Amino Acids b1747 ASTC [c] : 1.0 akg + 1.0 sucorn ==> 1.0 glu-L + 1.0 sucgsa b1745 b1745 Amino Acid "Arginine, Spermidine, etc." b1745 Amino Acids b1745 ASTB [c] : 2.0 h + 2.0 h2o + 1.0 sucarg ==> 1.0 co2 + 2.0 nh4 + 1.0 sucorn b1748 b1748 Amino Acid "Arginine, Spermidine, etc." b1748 Amino Acids b1748 ASTD [c] : 1.0 h2o + 1.0 nad + 1.0 sucgsa ==> 2.0 h + 1.0 nadh + 1.0 sucglu b1746 b1746 Amino Acid "Arginine, Spermidine, etc." b1746 Amino Acids b1746 ASTE [c] : 1.0 h2o + 1.0 sucglu ==> 1.0 glu-L + 1.0 succ b1744 b1744 Amino Acid "Arginine, Spermidine, etc." b1744 Amino Acids b1744 THRA1R [c] : 1.0 asp-L + 1.0 atp <==> 1.0 4pasp + 1.0 adp b0002 b0002 Amino Acid Threonine and Lysine b0002 Amino Acids b0002 METL1R [c] : 1.0 asp-L + 1.0 atp <==> 1.0 4pasp + 1.0 adp b3940 b3940 Amino Acid Threonine and Lysine b3940 Amino Acids b3940 LYSCR [c] : 1.0 asp-L + 1.0 atp <==> 1.0 4pasp + 1.0 adp b4024 b4024 Amino Acid Threonine and Lysine b4024 Amino Acids b4024 ASDR [c] : 1.0 4pasp + 1.0 h + 1.0 nadph <==> 1.0 aspsa + 1.0 nadp + 1.0 pi on b3433 Amino Acid Threonine and Lysine on " *EWB (no regulation given previously, assumed on)" * EWB reverersed direction on THRA2R [c] : 1.0 hom-L + 1.0 nadp <==> 1.0 aspsa + 1.0 h + 1.0 nadph b0002 b0002 Amino Acid Threonine and Lysine b0002 Amino Acids b0002 METL2R [c] : 1.0 hom-L + 1.0 nadp <==> 1.0 aspsa + 1.0 h + 1.0 nadph b3940 b3940 Amino Acid Threonine and Lysine b3940 Amino Acids b3940 THRB [c] : 1.0 atp + 1.0 hom-L ==> 1.0 adp + 1.0 h + 1.0 phom b0003 b0003 Amino Acid Threonine and Lysine b0003 "The Rest section in the Excel sheet MWC March 29, 2003" b0003 THRC1 [c] : 1.0 h2o + 1.0 phom ==> 1.0 pi + 1.0 thr-L b0004 b0004 Amino Acid Threonine and Lysine b0004 "The Rest section in the Excel sheet MWC March 29, 2003" b0004 DAPA [c] : 1.0 aspsa + 1.0 pyr ==> 1.0 23dhdp + 1.0 h + 2.0 h2o on b2478 Amino Acid Threonine and Lysine on " *EWB (no regulation given previously, assumed on)" on DAPB [c] : 1.0 23dhdp + 1.0 h + 1.0 nadph ==> 1.0 nadp + 1.0 thdp on b0031 Amino Acid Threonine and Lysine b0031 Amino Acids * EWB removed regulation to allow growth on rich media on DAPD [c] : 1.0 h2o + 1.0 succoa + 1.0 thdp ==> 1.0 coa + 1.0 sl2a6o on b0166 Amino Acid Threonine and Lysine on " *EWB (no regulation given previously, assumed on)" on DAPCR [c] : 1.0 akg + 1.0 sl26da <==> 1.0 glu-L + 1.0 sl2a6o on Amino Acid Threonine and Lysine on Amino Acids "* this is the only rxn that was unanotated, and a search in Reed + Ecocyc has not turned up another annotation" on DAPE [c] : 1.0 h2o + 1.0 sl26da ==> 1.0 26dap-LL + 1.0 succ on b2472 Amino Acid Threonine and Lysine on " *EWB (no regulation given previously, assumed on)" on DAPFR [c] : 1.0 26dap-LL <==> 1.0 26dap-M on b3809 Amino Acid Threonine and Lysine on " *EWB (no regulation given previously, assumed on)" on LYSA [c] : 1.0 26dap-M + 1.0 h ==> 1.0 co2 + 1.0 lys-L on b2838 Amino Acid Threonine and Lysine b2838 Catabolite Repression from Paigen and Park b2838 CADA [c] : 1.0 h + 1.0 lys-L ==> 1.0 15dap + 1.0 co2 b4131 b4131 Amino Acid Threonine and Lysine b4131 Amino Acids b4131 LDCC [c] : 1.0 h + 1.0 lys-L ==> 1.0 15dap + 1.0 co2 on b0186 Amino Acid Threonine and Lysine on " *EWB (no regulation given previously, assumed on)" on LYSUP1R 1.0 H[e] + 1.0 LYS[e] <==> 1.0 h[c] + 1.0 lys-L[c] on b2156 Amino Acid Threonine and Lysine on " *EWB (no regulation given previously, assumed on)" on LYSUP2 1.0 atp[c] + 1.0 h2o[c] + 1.0 LYS[e] ==> 1.0 adp[c] + 1.0 h[c] + 1.0 lys-L[c] + 1.0 pi[c] b2306 AND b2307 AND b2308 AND b2310 b2306 AND b2307 AND b2308 AND b2310 Amino Acid Threonine and Lysine b2306 AND b2307 AND b2308 AND b2310 Amino Acids b2306 AND b2307 AND b2308 AND b2310 LYSUP3 1.0 15dap[c] + 1.0 H[e] + 1.0 LYS[e] ==> 1.0 h[c] + 1.0 lys-L[c] + 1.0 CADV[e] b4132 b4132 Amino Acid Threonine and Lysine b4132 Amino Acids b4132 THRUP1 1.0 atp[c] + 1.0 h2o[c] + 1.0 THR[e] ==> 1.0 adp[c] + 1.0 h[c] + 1.0 pi[c] + 1.0 thr-L[c] b3454 AND b3455 AND b3456 AND b3457 AND b3460 b3454 AND b3455 AND b3456 AND b3457 AND b3460 Amino Acid Threonine and Lysine b3454 AND b3455 AND b3456 AND b3457 AND b3460 Amino Acids b3454 AND b3455 AND b3456 AND b3457 AND b3460 THRUP2R 1.0 H[e] + 1.0 THR[e] <==> 1.0 h[c] + 1.0 thr-L[c] b3116 b3116 Amino Acid Threonine and Lysine b3116 Catabolite Repression from Paigen and Park b3116 THRUP3 1.0 NA[e] + 1.0 THR[e] ==> 1.0 na1[c] + 1.0 thr-L[c] b3089 b3089 Amino Acid Threonine and Lysine b3089 NEW ONES in Category 6 b3089 TDH2 [c] : 1.0 nad + 1.0 thr-L ==> 1.0 2aobut + 1.0 h + 1.0 nadh b3616 b3616 Amino Acid Threonine and Lysine b3616 Amino Acids b3616 KBL2 [c] : 1.0 2aobut + 1.0 coa ==> 1.0 accoa + 1.0 gly b3617 b3617 Amino Acid Threonine and Lysine b3617 Amino Acids b3617 TDCB [c] : 1.0 thr-L ==> 1.0 2obut + 1.0 nh4 b3117 b3117 Amino Acid Threonine and Lysine b3117 Catabolite Repression from Paigen and Park b3117 SDAA2 [c] : 1.0 thr-L ==> 1.0 2obut + 1.0 nh4 b1814 b1814 Amino Acid Threonine and Lysine b1814 Alon Changes b1814 SDAB2 [c] : 1.0 thr-L ==> 1.0 2obut + 1.0 nh4 b2797 b2797 Amino Acid Threonine and Lysine b2797 Amino Acids b2797 META [c] : 1.0 hom-L + 1.0 succoa ==> 1.0 coa + 1.0 suchms b4013 b4013 Amino Acid Methionine b4013 Alon Changes b4013 METB1 [c] : 1.0 cys-L + 1.0 suchms ==> 1.0 cyst-L + 1.0 h + 1.0 succ b3939 b3939 Amino Acid Methionine b3939 Amino Acids b3939 METC [c] : 1.0 cyst-L + 1.0 h2o ==> 1.0 hcys-L + 1.0 nh4 + 1.0 pyr b3008 b3008 Amino Acid Methionine b3008 Amino Acids b3008 ADCSASER [c] : 1.0 ahcys + 1.0 h2o <==> 1.0 adn + 1.0 hcys-L on Amino Acid Methionine on " *EWB (no regulation given previously, assumed on)" on METH [c] : 1.0 5mthf + 1.0 hcys-L ==> 1.0 met-L + 1.0 thf b4019 b4019 Amino Acid Methionine b4019 Alon Changes b4019 METE [c] : 1.0 5mthf + 1.0 hcys-L ==> 1.0 met-L + 1.0 thf b3829 b3829 Amino Acid Methionine b3829 Amino Acids b3829 METK [c] : 1.0 atp + 1.0 h2o + 1.0 met-L ==> 1.0 amet + 1.0 pi + 1.0 ppi on b2942 Amino Acid Methionine on " *EWB (no regulation given previously, assumed on)" on METUP 1.0 atp[c] + 1.0 h2o[c] + 1.0 MET[e] ==> 1.0 adp[c] + 1.0 h[c] + 1.0 met-L[c] + 1.0 pi[c] on b0198 AND b0199 AND b0197 Amino Acid Methionine on " *EWB (no regulation given previously, assumed on)" on CYSD [c] : 1.0 atp + 1.0 gtp + 1.0 h2o + 1.0 so4 ==> 1.0 aps + 1.0 gdp + 1.0 pi + 1.0 ppi b2752 AND b2751 b2752 AND b2751 Amino Acid Cysteine b2752 AND b2751 Amino Acids b2752 AND b2751 CYSC [c] : 1.0 aps + 1.0 atp ==> 1.0 adp + 1.0 h + 1.0 paps b2750 b2750 Amino Acid Cysteine b2750 Amino Acids b2750 CYSH [c] : 1.0 paps + 1.0 trdrd ==> 2.0 h + 1.0 pap + 1.0 so3 + 1.0 trdox b2762 b2762 Amino Acid Cysteine b2762 Amino Acids b2762 CYSIR [c] : 3.0 h2o + 1.0 h2s + 3.0 nadp <==> 5.0 h + 3.0 nadph + 1.0 so3 b2764 AND b2763 b2764 AND b2763 Amino Acid Cysteine b2764 AND b2763 Amino Acids b2764 AND b2763 CYSER [c] : 1.0 accoa + 1.0 ser-L <==> 1.0 acser + 1.0 coa b3607 b3607 Amino Acid Cysteine b3607 Amino Acids b3607 CYSK [c] : 1.0 acser + 1.0 h2s ==> 1.0 ac + 1.0 cys-L + 1.0 h b2414 b2414 Amino Acid Cysteine b2414 Amino Acids b2414 CYSM [c] : 1.0 acser + 1.0 h2s ==> 1.0 ac + 1.0 cys-L + 1.0 h b2421 b2421 Amino Acid Cysteine b2421 Amino Acids b2421 BISPHDS [c] : 1.0 h2o + 1.0 pap ==> 1.0 amp + 1.0 pi on b4214 Amino Acid Cysteine on " *EWB (no regulation given previously, assumed on)" on CYSUP 1.0 atp[c] + 1.0 h2o[c] + 1.0 CYS[e] ==> 1.0 adp[c] + 1.0 cys-L[c] + 1.0 h[c] + 1.0 pi[c] b0886 AND b0887 b0886 AND b0887 Amino Acid Cysteine b0886 AND b0887 Amino Acids b0886 AND b0887 CYSUP2 1.0 atp[c] + 1.0 h2o[c] + 1.0 CYS[e] ==> 1.0 adp[c] + 1.0 cys-L[c] + 1.0 h[c] + 1.0 pi[c] on b0886 AND b0887 Amino Acid Cysteine on " *EWB (no regulation given previously, assumed on)" on CYSUP3 1.0 atp[c] + 1.0 h2o[c] + 1.0 CYS[e] ==> 1.0 adp[c] + 1.0 cys-L[c] + 1.0 h[c] + 1.0 pi[c] on b0886 AND b0887 Amino Acid Cysteine on " *EWB (no regulation given previously, assumed on)" on TNAA1 [c] : 1.0 cys-L + 1.0 h2o ==> 1.0 h2s + 1.0 nh4 + 1.0 pyr b3708 b3708 Amino Acid Cysteine b3708 Alon Changes b3708 CYSDFSE [c] : 1.0 cys-L + 1.0 h2o ==> 1.0 h2s + 1.0 nh4 + 1.0 pyr b3708 b3708 Amino Acid Cysteine b3708 Alon Changes b3708 H2SO4UP 1.0 atp[c] + 1.0 h2o[c] + 1.0 SLF[e] ==> 1.0 adp[c] + 1.0 h[c] + 1.0 pi[c] + 1.0 so4[c] b2422 AND b2423 AND b2424 AND b2425 b2422 AND b2423 AND b2424 AND b2425 Amino Acid Cysteine b2422 AND b2423 AND b2424 AND b2425 Amino Acids b2422 AND b2423 AND b2424 AND b2425 H2SO4UP2 1.0 atp[c] + 1.0 h2o[c] + 1.0 SLF[e] ==> 1.0 adp[c] + 1.0 h[c] + 1.0 pi[c] + 1.0 so4[c] b2413 AND b2422 AND b2423 AND b2424 AND b3917 b2413 AND b2422 AND b2423 AND b2424 AND b3917 Amino Acid Cysteine b2413 AND b2422 AND b2423 AND b2424 AND b3917 Amino Acids b2413 AND b2422 AND b2423 AND b2424 AND b3917 SSO3UP 1.0 atp[c] + 1.0 h2o[c] + 1.0 SSO3[e] ==> 1.0 adp[c] + 1.0 h[c] + 1.0 pi[c] + 1.0 tsul[c] b2422 AND b2423 AND b2424 AND b2425 b2422 AND b2423 AND b2424 AND b2425 Amino Acid Cysteine b2422 AND b2423 AND b2424 AND b2425 Amino Acids b2422 AND b2423 AND b2424 AND b2425 SSO3UP2 1.0 atp[c] + 1.0 h2o[c] + 1.0 SSO3[e] ==> 1.0 adp[c] + 1.0 h[c] + 1.0 pi[c] + 1.0 tsul[c] b2422 AND b2423 AND b2424 AND b3917 b2422 AND b2423 AND b2424 AND b3917 Amino Acid Cysteine b2422 AND b2423 AND b2424 AND b3917 Amino Acids b2422 AND b2423 AND b2424 AND b3917 PRSAR [c] : 1.0 atp + 1.0 r5p <==> 1.0 amp + 1.0 h + 1.0 prpp b1207 b1207 Amino Acid Histidine b1207 Alon Changes b1207 HISG [c] : 1.0 atp + 1.0 prpp ==> 1.0 ppi + 1.0 prbatp on b2019 Amino Acid Histidine on " *EWB (no regulation given previously, assumed on)" on HISI1 [c] : 1.0 h2o + 1.0 prbatp ==> 1.0 h + 1.0 ppi + 1.0 prbamp on b2026 Amino Acid Histidine on " *EWB (no regulation given previously, assumed on)" on HISI2 [c] : 1.0 h2o + 1.0 prbamp ==> 1.0 prfp on b2026 Amino Acid Histidine on " *EWB (no regulation given previously, assumed on)" on HISA [c] : 1.0 prfp ==> 1.0 prlp on b2024 Amino Acid Histidine on " *EWB (no regulation given previously, assumed on)" on HISF [c] : 1.0 gln-L + 1.0 prlp ==> 1.0 aicar + 1.0 eig3p + 1.0 glu-L + 1.0 h on b2025 Amino Acid Histidine on " *EWB (no regulation given previously, assumed on)" on HISB1 [c] : 1.0 eig3p ==> 1.0 h2o + 1.0 imacp on b2022 Amino Acid Histidine on " *EWB (no regulation given previously, assumed on)" on HISC [c] : 1.0 glu-L + 1.0 imacp ==> 1.0 akg + 1.0 hisp b2021 b2021 Amino Acid Histidine b2021 b2021 HISB2 [c] : 1.0 h2o + 1.0 hisp ==> 1.0 histd + 1.0 pi on b2022 Amino Acid Histidine on " *EWB (no regulation given previously, assumed on)" on HISD [c] : 1.0 h2o + 1.0 histd + 2.0 nad ==> 3.0 h + 1.0 his-L + 2.0 nadh on b2020 Amino Acid Histidine on " *EWB (no regulation given previously, assumed on)" on HISUP 1.0 atp[c] + 1.0 h2o[c] + 1.0 HIS[e] ==> 1.0 adp[c] + 1.0 h[c] + 1.0 his-L[c] + 1.0 pi[c] b2306 AND b2307 AND b2308 AND b2309 b2306 AND b2307 AND b2308 AND b2309 Amino Acid Histidine b2306 AND b2307 AND b2308 AND b2309 Alon Changes b2306 AND b2307 AND b2308 AND b2309 HISUP2R 1.0 H[e] + 1.0 HIS[e] <==> 1.0 h[c] + 1.0 his-L[c] b0112 b0112 Amino Acid Histidine b0112 Alon Changes b0112 PROB [c] : 1.0 atp + 1.0 glu-L ==> 1.0 adp + 1.0 glu5p b0242 b0242 Amino Acid Proline b0242 NEW ONES in Category 6 b0242 PROA [c] : 1.0 glu5p + 1.0 h + 1.0 nadph ==> 1.0 glu5sa + 1.0 nadp + 1.0 pi on b0243 Amino Acid Proline on " *EWB (no regulation given previously, assumed on)" on ARGE2 [c] : 1.0 acg5sa + 1.0 h2o ==> 1.0 ac + 1.0 glu5sa b3957 b3957 Amino Acid Proline b3957 Amino Acids b3957 PROC [c] : 1.0 1pyr5c + 2.0 h + 1.0 nadph ==> 1.0 nadp + 1.0 pro-L on b0386 Amino Acid Proline on " *EWB (no regulation given previously, assumed on)" on SPONT1 [c] : 1.0 glu5sa ==> 1.0 1pyr5c + 1.0 h + 1.0 h2o on Amino Acid Proline on " *EWB (no regulation given previously, assumed on)" on PUTA1 [c] : 1.0 fad + 1.0 pro-L ==> 1.0 1pyr5c + 1.0 fadh2 + 1.0 h b1014 b1014 Amino Acid Proline b1014 Alon Changes b1014 PUTA2 [c] : 1.0 1pyr5c + 2.0 h2o + 1.0 nad ==> 1.0 glu-L + 1.0 h + 1.0 nadh b1014 b1014 Amino Acid Proline b1014 Alon Changes b1014 PROUPR 1.0 H[e] + 1.0 PRO[e] <==> 1.0 h[c] + 1.0 pro-L[c] b4111 b4111 Amino Acid Proline b4111 Alon Changes b4111 PROUP2 1.0 NA[e] + 1.0 PRO[e] ==> 1.0 na1[c] + 1.0 pro-L[c] b1015 b1015 Amino Acid Proline b1015 Alon Changes b1015 PROUP3 1.0 atp[c] + 1.0 h2o[c] + 1.0 PRO[e] ==> 1.0 adp[c] + 1.0 h[c] + 1.0 pi[c] + 1.0 pro-L[c] b2677 AND b2678 AND b2679 b2677 AND b2678 AND b2679 Amino Acid Proline b2677 AND b2678 AND b2679 NEW ONES in Category 6 b2677 AND b2678 AND b2679 AROF [c] : 1.0 e4p + 1.0 h2o + 1.0 pep ==> 1.0 2dda7p + 1.0 pi b2601 b2601 Amino Acid Aromatic Amino Acids b2601 Amino Acids b2601 AROG [c] : 1.0 e4p + 1.0 h2o + 1.0 pep ==> 1.0 2dda7p + 1.0 pi b0754 b0754 Amino Acid Aromatic Amino Acids b0754 Amino Acids b0754 AROH [c] : 1.0 e4p + 1.0 h2o + 1.0 pep ==> 1.0 2dda7p + 1.0 pi b1704 b1704 Amino Acid Aromatic Amino Acids b1704 Amino Acids b1704 AROB [c] : 1.0 2dda7p ==> 1.0 3dhq + 1.0 pi on b3389 Amino Acid Aromatic Amino Acids on " *EWB (no regulation given previously, assumed on)" on ARODR [c] : 1.0 3dhq <==> 1.0 3dhsk + 1.0 h2o on b1693 Amino Acid Aromatic Amino Acids on " *EWB (no regulation given previously, assumed on)" on AROER [c] : 1.0 3dhsk + 1.0 h + 1.0 nadph <==> 1.0 nadp + 1.0 skm on b3281 Amino Acid Aromatic Amino Acids on " *EWB (no regulation given previously, assumed on)" on AROK [c] : 1.0 atp + 1.0 skm ==> 1.0 adp + 1.0 h + 1.0 skm5p on b3390 Amino Acid Aromatic Amino Acids on " *EWB (no regulation given previously, assumed on)" on AROL [c] : 1.0 atp + 1.0 skm ==> 1.0 adp + 1.0 h + 1.0 skm5p b0388 b0388 Amino Acid Aromatic Amino Acids b0388 Amino Acids b0388 AROAR [c] : 1.0 pep + 1.0 skm5p <==> 1.0 3psme + 1.0 pi on b0908 Amino Acid Aromatic Amino Acids on " *EWB (no regulation given previously, assumed on)" on AROC [c] : 1.0 3psme ==> 1.0 chor + 1.0 pi on b2329 Amino Acid Aromatic Amino Acids on " *EWB (no regulation given previously, assumed on)" on PHEA1 [c] : 1.0 chor ==> 1.0 pphn b2599 b2599 Amino Acid Aromatic Amino Acids b2599 Amino Acids b2599 PHEA2 [c] : 1.0 h + 1.0 pphn ==> 1.0 co2 + 1.0 h2o + 1.0 phpyr b2599 b2599 Amino Acid Aromatic Amino Acids b2599 Amino Acids b2599 TYRB1R [c] : 1.0 glu-L + 1.0 phpyr <==> 1.0 akg + 1.0 phe-L b4054 b4054 Amino Acid Aromatic Amino Acids b4054 "The Rest section in the Excel sheet MWC March 29, 2003" * EWB reversed direction b4054 ASPC3R [c] : 1.0 glu-L + 1.0 phpyr <==> 1.0 akg + 1.0 phe-L on b0928 Amino Acid Aromatic Amino Acids on " *EWB (no regulation given previously, assumed on)" * EWB reversed direction on ILVE3R [c] : 1.0 glu-L + 1.0 phpyr <==> 1.0 akg + 1.0 phe-L b3770 b3770 Amino Acid Aromatic Amino Acids b3770 NEW ONES in Category 6 * EWB reversed direction b3770 TYRA1 [c] : 1.0 chor ==> 1.0 pphn b2600 b2600 Amino Acid Aromatic Amino Acids b2600 Amino Acids b2600 TYRA2 [c] : 1.0 nad + 1.0 pphn ==> 1.0 34hpp + 1.0 co2 + 1.0 nadh b2600 b2600 Amino Acid Aromatic Amino Acids b2600 Amino Acids b2600 TYRB2R [c] : 1.0 34hpp + 1.0 glu-L <==> 1.0 akg + 1.0 tyr-L b4054 b4054 Amino Acid Aromatic Amino Acids b4054 "The Rest section in the Excel sheet MWC March 29, 2003" * EWB reverse diection b4054 ASPC2R [c] : 1.0 34hpp + 1.0 glu-L <==> 1.0 akg + 1.0 tyr-L on b0928 Amino Acid Aromatic Amino Acids on " *EWB (no regulation given previously, assumed on)" * EWB reverse diection on TRPDE [c] : 1.0 chor + 1.0 gln-L ==> 1.0 anth + 1.0 glu-L + 1.0 h + 1.0 pyr b1263 AND b1264 b1263 AND b1264 Amino Acid Aromatic Amino Acids b1263 AND b1264 Amino Acids b1263 AND b1264 TRPD [c] : 1.0 anth + 1.0 prpp ==> 1.0 ppi + 1.0 pran b1263 b1263 Amino Acid Aromatic Amino Acids b1263 Amino Acids b1263 TRPC1 [c] : 1.0 pran ==> 1.0 2cpr5p b1262 b1262 Amino Acid Aromatic Amino Acids b1262 Amino Acids b1262 TRPC2 [c] : 1.0 2cpr5p + 1.0 h ==> 1.0 3ig3p + 1.0 co2 + 1.0 h2o b1262 b1262 Amino Acid Aromatic Amino Acids b1262 Amino Acids b1262 TRPA [c] : 1.0 3ig3p + 1.0 ser-L ==> 1.0 g3p + 1.0 h2o + 1.0 trp-L b1260 AND b1261 b1260 AND b1261 Amino Acid Aromatic Amino Acids b1260 AND b1261 Amino Acids b1260 AND b1261 PHEUPR 1.0 H[e] + 1.0 PHE[e] <==> 1.0 h[c] + 1.0 phe-L[c] b0112 b0112 Amino Acid Aromatic Amino Acids b0112 Amino Acids b0112 PHEUP2R 1.0 H[e] + 1.0 PHE[e] <==> 1.0 h[c] + 1.0 phe-L[c] on b0576 Amino Acid Aromatic Amino Acids on " *EWB (no regulation given previously, assumed on)" on TRPUPR 1.0 H[e] + 1.0 TRP[e] <==> 1.0 h[c] + 1.0 trp-L[c] b3709 b3709 Amino Acid Aromatic Amino Acids b3709 Amino Acids b3709 TRPUP2R 1.0 H[e] + 1.0 TRP[e] <==> 1.0 h[c] + 1.0 trp-L[c] b0112 b0112 Amino Acid Aromatic Amino Acids b0112 Amino Acids b0112 TRPUP3R 1.0 H[e] + 1.0 TRP[e] <==> 1.0 h[c] + 1.0 trp-L[c] b3161 b3161 Amino Acid Aromatic Amino Acids b3161 Amino Acids b3161 TYRUPR 1.0 H[e] + 1.0 TYR[e] <==> 1.0 h[c] + 1.0 tyr-L[c] b1907 b1907 Amino Acid Aromatic Amino Acids b1907 Amino Acids b1907 TYRUP2R 1.0 H[e] + 1.0 TYR[e] <==> 1.0 h[c] + 1.0 tyr-L[c] on b1907 Amino Acid Aromatic Amino Acids on " *EWB (no regulation given previously, assumed on)" on TYRUP3R 1.0 H[e] + 1.0 TYR[e] <==> 1.0 h[c] + 1.0 tyr-L[c] b0112 b0112 Amino Acid Aromatic Amino Acids b0112 Amino Acids b0112 TNAA3R [c] : 1.0 h2o + 1.0 trp-L <==> 1.0 indole + 1.0 nh4 + 1.0 pyr b3708 b3708 Amino Acid Aromatic Amino Acids b3708 Alon Changes b3708 SERA [c] : 1.0 3pg + 1.0 nad ==> 1.0 3php + 1.0 h + 1.0 nadh on b2913 Amino Acid Serine and Glycine on " *EWB (no regulation given previously, assumed on)" on SERC1 [c] : 1.0 3php + 1.0 glu-L ==> 1.0 akg + 1.0 pser-L on b0907 Amino Acid Serine and Glycine b0907 Amino Acids b0907 SERB [c] : 1.0 h2o + 1.0 pser-L ==> 1.0 pi + 1.0 ser-L on b4388 Amino Acid Serine and Glycine on " *EWB (no regulation given previously, assumed on)" on GLYA3 [c] : 1.0 ser-L + 1.0 thf ==> 1.0 gly + 1.0 h2o + 1.0 mlthf b2551 b2551 Amino Acid Serine and Glycine b2551 Alon Changes b2551 GLYUP1R 1.0 GLY[e] + 1.0 H[e] <==> 1.0 gly[c] + 1.0 h[c] on b4208 Amino Acid Serine and Glycine on " *EWB (no regulation given previously, assumed on)" on SERUP1R 1.0 H[e] + 1.0 SER[e] <==> 1.0 h[c] + 1.0 ser-L[c] b2796 b2796 Amino Acid Serine and Glycine b2796 Amino Acids b2796 SERUP2 1.0 NA[e] + 1.0 SER[e] ==> 1.0 na1[c] + 1.0 ser-L[c] b3089 b3089 Amino Acid Serine and Glycine b3089 NEW ONES in Category 6 b3089 SERUP3R 1.0 H[e] + 1.0 SER[e] <==> 1.0 h[c] + 1.0 ser-L[c] b3116 b3116 Amino Acid Serine and Glycine b3116 Catabolite Repression from Paigen and Park b3116 SDAA1 [c] : 1.0 ser-L ==> 1.0 nh4 + 1.0 pyr b1814 b1814 Amino Acid Serine and Glycine b1814 Amino Acids b1814 SDAB1 [c] : 1.0 ser-L ==> 1.0 nh4 + 1.0 pyr b2797 b2797 Amino Acid Serine and Glycine b2797 Amino Acids b2797 TNAA2 [c] : 1.0 ser-L ==> 1.0 nh4 + 1.0 pyr b3708 b3708 Amino Acid Serine and Glycine b3708 Alon Changes b3708 DSDA [c] : 1.0 ser-D ==> 1.0 nh4 + 1.0 pyr b2366 b2366 Amino Acid Serine and Glycine b2366 Alon Changes b2366 GCV [c] : 1.0 gly + 1.0 nad + 1.0 thf ==> 1.0 co2 + 1.0 mlthf + 1.0 nadh + 1.0 nh4 b0116 AND b2903 AND b2904 AND b2905 b0116 AND b2903 AND b2904 AND b2905 Amino Acid Serine and Glycine b0116 AND b2903 AND b2904 AND b2905 Alon Changes b0116 AND b2903 AND b2904 AND b2905 NAUP1 1.0 na1[c] + 2.0 H[e] ==> 2.0 h[c] + 1.0 NA[e] b0019 b0019 Transporters b0019 Alon Changes b0019 NAUP3 2.0 na1[c] + 3.0 H[e] ==> 3.0 h[c] + 2.0 NA[e] on b1186 Transporters on " *EWB (no regulation given previously, assumed on)" on NAUP2R 1.0 na1[c] + 1.0 H[e] <==> 1.0 h[c] + 1.0 NA[e] on b1216 Transporters on " *EWB (no regulation given previously, assumed on)" on NH3UPR 1.0 NH3[e] <==> 1.0 nh4[c] on Transporters on " *EWB (no regulation given previously, assumed on)" on CYNTR [c] : 1.0 co2 + 1.0 h2o <==> 1.0 h + 1.0 hco3 on b0339 Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on NDK1R [c] : 1.0 atp + 1.0 gdp <==> 1.0 adp + 1.0 gtp on b2518 Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on TRXB [c] : 1.0 h + 1.0 nadph + 1.0 trdox ==> 1.0 nadp + 1.0 trdrd b0888 b0888 Metabolism Oxidative Phosphorylation b0888 b0888 AGP [c] : 1.0 g1p + 1.0 h2o ==> 1.0 glc-D + 1.0 pi on b1002 Metabolism Glycolysis/gluconeogenesis on " *EWB (no regulation given previously, assumed on)" on GAPCR [c] : 1.0 g3p + 1.0 nad + 1.0 pi <==> 1.0 13dpg + 1.0 h + 1.0 nadh on Metabolism Glycolysis/gluconeogenesis on " *EWB (no regulation given previously, assumed on)" on GLGC [c] : 1.0 atp + 1.0 g1p + 1.0 h ==> 1.0 adpglc + 1.0 ppi on b3430 Metabolism Glycolysis/gluconeogenesis on " *EWB (no regulation given previously, assumed on)" on GLGA [c] : 1.0 adpglc ==> 1.0 adp + 1.0 glycogen + 1.0 h on b3429 Metabolism Glycolysis/gluconeogenesis on " *EWB (no regulation given previously, assumed on)" on GLGP [c] : 1.0 glycogen + 1.0 pi ==> 1.0 g1p b3428 b3428 Metabolism Glycolysis/gluconeogenesis b3428 Alon Changes b3428 MALP [c] : 1.0 glycogen + 1.0 pi ==> 1.0 g1p b3417 b3417 Metabolism Glycolysis/gluconeogenesis b3417 Alon Changes b3417 EDD [c] : 1.0 6pgc ==> 1.0 2ddg6p + 1.0 h2o b1851 b1851 Metabolism Pentose Phosphate Cycle b1851 "The Rest section in the Excel sheet MWC March 29, 2003" b1851 EDA [c] : 1.0 2ddg6p ==> 1.0 g3p + 1.0 pyr b1850 b1850 Metabolism Pentose Phosphate Cycle b1850 "The Rest section in the Excel sheet MWC March 29, 2003" b1850 FRDA1 [c] : 1.0 fum + 1.0 mql8 ==> 1.0 mqn8 + 1.0 succ b4152 AND b4151 AND b4153 AND b4154 b4152 AND b4151 AND b4153 AND b4154 Metabolism Oxidative Phosphorylation b4152 AND b4151 AND b4153 AND b4154 Alon Changes b4152 AND b4151 AND b4153 AND b4154 FRDA2 [c] : 1.0 2dmmql8 + 1.0 fum ==> 1.0 2dmmq8 + 1.0 succ b4152 AND b4151 AND b4153 AND b4154 b4152 AND b4151 AND b4153 AND b4154 Metabolism TCA Cycle b4152 AND b4151 AND b4153 AND b4154 Alon Changes b4152 AND b4151 AND b4153 AND b4154 LDHAR [c] : 1.0 lac-D + 1.0 nad <==> 1.0 h + 1.0 nadh + 1.0 pyr on b1380 Metabolism Pyruvate metabolism on " *EWB (no regulation given previously, assumed on)" on FDHF1 [c] : 1.0 for + 1.0 h ==> 1.0 co2 + 1.0 h2 b2722 AND b2723 AND b2724 AND b2720 AND b2721 AND b2719 AND b4079 b2722 AND b2723 AND b2724 AND b2720 AND b2721 AND b2719 AND b4079 Metabolism Pyruvate metabolism b2722 AND b2723 AND b2724 AND b2720 AND b2721 AND b2719 AND b4079 Catabolite Repression from Paigen and Park b2722 AND b2723 AND b2724 AND b2720 AND b2721 AND b2719 AND b4079 PURT1R [c] : 1.0 ac + 1.0 atp <==> 1.0 actp + 1.0 adp b1849 b1849 Metabolism Pyruvate metabolism b1849 "The Rest section in the Excel sheet MWC March 29, 2003" b1849 GLCB [c] : 1.0 accoa + 1.0 glx + 1.0 h2o ==> 1.0 coa + 1.0 h + 1.0 mal-L b2976 b2976 Metabolism Anaplerotic reactions b2976 "The Rest section in the Excel sheet MWC March 29, 2003" b2976 FDHF2 1.0 for[c] + 3.0 h[c] + 1.0 q8[c] ==> 1.0 co2[c] + 1.0 q8h2[c] + 2.0 H[e] b4079 b4079 Metabolism Oxidative Phosphorylation b4079 Alon Changes b4079 POXB [c] : 1.0 h2o + 1.0 pyr + 1.0 q8 ==> 1.0 ac + 1.0 co2 + 1.0 q8h2 b0871 b0871 Metabolism Oxidative Phosphorylation b0871 "The Rest section in the Excel sheet MWC March 29, 2003" b0871 HYAA1 2.0 h[c] + 1.0 h2[c] + 1.0 q8[c] ==> 1.0 q8h2[c] + 2.0 H[e] b0973 AND b0974 AND b0972 b0973 AND b0974 AND b0972 Metabolism Oxidative Phosphorylation b0973 AND b0974 AND b0972 "The Rest section in the Excel sheet MWC March 29, 2003" b0973 AND b0974 AND b0972 HYBA1 2.0 h[c] + 1.0 h2[c] + 1.0 q8[c] ==> 1.0 q8h2[c] + 2.0 H[e] b2722 AND b2723 AND b2724 AND b2720 AND b2721 AND b2719 b2722 AND b2723 AND b2724 AND b2720 AND b2721 AND b2719 Metabolism Oxidative Phosphorylation b2722 AND b2723 AND b2724 AND b2720 AND b2721 AND b2719 Catabolite Repression from Paigen and Park b2722 AND b2723 AND b2724 AND b2720 AND b2721 AND b2719 HYCF1 2.0 h[c] + 1.0 h2[c] + 1.0 q8[c] ==> 1.0 q8h2[c] + 2.0 H[e] on b2720 Metabolism Oxidative Phosphorylation on " *EWB (no regulation given previously, assumed on)" on GLPA2 [c] : 1.0 glyc3p + 1.0 mqn8 ==> 1.0 dhap + 1.0 mql8 b2243 AND b2242 AND b2241 b2243 AND b2242 AND b2241 Metabolism Oxidative Phosphorylation b2243 AND b2242 AND b2241 Catabolite Repression from Paigen and Park b2243 AND b2242 AND b2241 GLPA3 [c] : 1.0 2dmmq8 + 1.0 glyc3p ==> 1.0 2dmmql8 + 1.0 dhap b2243 AND b2242 AND b2241 b2243 AND b2242 AND b2241 Metabolism Oxidative Phosphorylation b2243 AND b2242 AND b2241 Catabolite Repression from Paigen and Park b2243 AND b2242 AND b2241 HYAA2 2.0 h[c] + 1.0 h2[c] + 1.0 mqn8[c] ==> 1.0 mql8[c] + 2.0 H[e] b0973 AND b0974 AND b0972 b0973 AND b0974 AND b0972 Metabolism Oxidative Phosphorylation b0973 AND b0974 AND b0972 "The Rest section in the Excel sheet MWC March 29, 2003" b0973 AND b0974 AND b0972 HYAA3 1.0 2dmmq8[c] + 2.0 h[c] + 1.0 h2[c] ==> 1.0 2dmmql8[c] + 2.0 H[e] b0973 AND b0974 AND b0972 b0973 AND b0974 AND b0972 Metabolism Oxidative Phosphorylation b0973 AND b0974 AND b0972 "The Rest section in the Excel sheet MWC March 29, 2003" b0973 AND b0974 AND b0972 HYBA2 2.0 h[c] + 1.0 h2[c] + 1.0 mqn8[c] ==> 1.0 mql8[c] + 2.0 H[e] b2994 AND b2997 b2994 AND b2997 Metabolism Oxidative Phosphorylation b2994 AND b2997 Catabolite Repression from Paigen and Park b2994 AND b2997 HYBA3 1.0 2dmmq8[c] + 2.0 h[c] + 1.0 h2[c] ==> 1.0 2dmmql8[c] + 2.0 H[e] b2994 AND b2997 b2994 AND b2997 Metabolism Oxidative Phosphorylation b2994 AND b2997 Catabolite Repression from Paigen and Park b2994 AND b2997 NDH2 [c] : 1.0 h + 1.0 mqn8 + 1.0 nadh ==> 1.0 mql8 + 1.0 nad b1109 b1109 Metabolism Oxidative Phosphorylation b1109 "The Rest section in the Excel sheet MWC March 29, 2003" b1109 NUOA2 3.0 h[c] + 1.0 mqn8[c] + 1.0 nadh[c] ==> 1.0 mql8[c] + 1.0 nad[c] + 2.0 H[e] b2279 AND b2277 AND b2284 AND b2282 AND b2278 AND b2288 AND b2276 AND b2287 AND b2283 AND b2281 AND b2286 AND b2280 AND b2285 b2279 AND b2277 AND b2284 AND b2282 AND b2278 AND b2288 AND b2276 AND b2287 AND b2283 AND b2281 AND b2286 AND b2280 AND b2285 Metabolism Oxidative Phosphorylation b2279 AND b2277 AND b2284 AND b2282 AND b2278 AND b2288 AND b2276 AND b2287 AND b2283 AND b2281 AND b2286 AND b2280 AND b2285 Alon Changes b2279 AND b2277 AND b2284 AND b2282 AND b2278 AND b2288 AND b2276 AND b2287 AND b2283 AND b2281 AND b2286 AND b2280 AND b2285 NDH3 [c] : 1.0 2dmmq8 + 1.0 h + 1.0 nadh ==> 1.0 2dmmql8 + 1.0 nad b1109 b1109 Metabolism Oxidative Phosphorylation b1109 "The Rest section in the Excel sheet MWC March 29, 2003" b1109 NUOA3 1.0 2dmmq8[c] + 3.8 h[c] + 1.0 nadh[c] ==> 1.0 2dmmql8[c] + 1.0 nad[c] + 2.8 H[e] b2279 AND b2277 AND b2284 AND b2282 AND b2278 AND b2288 AND b2276 AND b2287 AND b2283 AND b2281 AND b2286 AND b2280 AND b2285 b2279 AND b2277 AND b2284 AND b2282 AND b2278 AND b2288 AND b2276 AND b2287 AND b2283 AND b2281 AND b2286 AND b2280 AND b2285 Metabolism Oxidative Phosphorylation b2279 AND b2277 AND b2284 AND b2282 AND b2278 AND b2288 AND b2276 AND b2287 AND b2283 AND b2281 AND b2286 AND b2280 AND b2285 Alon Changes b2279 AND b2277 AND b2284 AND b2282 AND b2278 AND b2288 AND b2276 AND b2287 AND b2283 AND b2281 AND b2286 AND b2280 AND b2285 FDNG2 1.0 for[c] + 3.0 h[c] + 1.0 mqn8[c] ==> 1.0 co2[c] + 1.0 mql8[c] + 2.0 H[e] b1474 AND b1476 AND b1475 b1474 AND b1476 AND b1475 Metabolism Oxidative Phosphorylation b1474 AND b1476 AND b1475 Alon Changes b1474 AND b1476 AND b1475 FDOH2 1.0 for[c] + 3.0 h[c] + 1.0 mqn8[c] ==> 1.0 co2[c] + 1.0 mql8[c] + 2.0 H[e] b3893 AND b3894 AND b3892 b3893 AND b3894 AND b3892 Metabolism Oxidative Phosphorylation b3893 AND b3894 AND b3892 "The Rest section in the Excel sheet MWC March 29, 2003" b3893 AND b3894 AND b3892 PYRD2 [c] : 1.0 dhor-S + 1.0 mqn8 ==> 1.0 mql8 + 1.0 orot b0945 b0945 Purine and Pyrimidine Biosynthesis b0945 Alon Changes b0945 NADB2 [c] : 1.0 asp-L + 1.0 mqn8 ==> 1.0 iasp + 1.0 mql8 b2574 b2574 Cofactor and Prosthetic Group Biosynthesis b2574 Alon Changes b2574 NADB3 [c] : 1.0 asp-L + 1.0 fum ==> 1.0 iasp + 1.0 succ b2574 b2574 Cofactor and Prosthetic Group Biosynthesis b2574 Alon Changes b2574 NADB4 [c] : 1.0 asp-L + 1.0 o2 ==> 1.0 h2o2 + 1.0 iasp b2574 b2574 Cofactor and Prosthetic Group Biosynthesis b2574 Alon Changes b2574 MELA [c] : 1.0 h2o + 1.0 melib ==> 1.0 gal + 1.0 glc-D b4119 b4119 Alternate Carbon Metabolism b4119 "The Rest section in the Excel sheet MWC March 29, 2003" b4119 GALTR [c] : 1.0 gal1p + 1.0 udpg <==> 1.0 g1p + 1.0 udpgal b0758 b0758 Alternate Carbon Metabolism b0758 Alon Changes b0758 BGLX [c] : 1.0 h2o + 1.0 lcts ==> 1.0 gal + 1.0 glc-D on b2132 Alternate Carbon Metabolism on " *EWB (no regulation given previously, assumed on)" on TREC [c] : 1.0 h2o + 1.0 tre6p ==> 1.0 g6p + 1.0 glc-D b4239 b4239 Alternate Carbon Metabolism b4239 "The Rest section in the Excel sheet MWC March 29, 2003" b4239 FRCTDS [c] : 1.0 h2o + 1.0 suc6p ==> 1.0 fru + 1.0 g6p on Alternate Carbon Metabolism on " *EWB (no regulation given previously, assumed on)" on FRUK1 [c] : 1.0 atp + 1.0 f1p ==> 1.0 adp + 1.0 fdp + 1.0 h b2168 b2168 Alternate Carbon Metabolism b2168 "The Rest section in the Excel sheet MWC March 29, 2003" b2168 XYLA1 [c] : 1.0 fru ==> 1.0 glc-D b3565 b3565 Alternate Carbon Metabolism b3565 "The Rest section in the Excel sheet MWC March 29, 2003" b3565 CPSGR [c] : 1.0 man1p <==> 1.0 man6p on b2048 Alternate Carbon Metabolism on " *EWB (no regulation given previously, assumed on)" on MANAR [c] : 1.0 man6p <==> 1.0 f6p b1613 b1613 Alternate Carbon Metabolism b1613 NEW ONES in Category 6 b1613 NAGA [c] : 1.0 acgam6p + 1.0 h2o ==> 1.0 ac + 1.0 gam6p b0677 b0677 Alternate Carbon Metabolism b0677 "The Rest section in the Excel sheet MWC March 29, 2003" b0677 NAGB [c] : 1.0 gam6p + 1.0 h2o ==> 1.0 f6p + 1.0 nh4 b0678 b0678 Alternate Carbon Metabolism b0678 "The Rest section in the Excel sheet MWC March 29, 2003" b0678 NANA [c] : 1.0 acnam ==> 1.0 acmana + 1.0 pyr on b3225 Alternate Carbon Metabolism on " *EWB (no regulation given previously, assumed on)" on FUCIR [c] : 1.0 fuc-L <==> 1.0 fcl-L b2802 b2802 Alternate Carbon Metabolism b2802 Alon Changes b2802 FUCK [c] : 1.0 atp + 1.0 fcl-L ==> 1.0 adp + 1.0 fc1p + 1.0 h b2803 b2803 Alternate Carbon Metabolism b2803 Alon Changes b2803 FUCAR [c] : 1.0 fc1p <==> 1.0 dhap + 1.0 lald-L b2800 b2800 Alternate Carbon Metabolism b2800 Alon Changes b2800 FUCOR [c] : 1.0 h + 1.0 lald-L + 1.0 nadh <==> 1.0 12ppd-S + 1.0 nad b2799 b2799 Alternate Carbon Metabolism b2799 Alon Changes b2799 ALDAR [c] : 1.0 h2o + 1.0 lald-L + 1.0 nad <==> 2.0 h + 1.0 lac-L + 1.0 nadh b1415 b1415 Alternate Carbon Metabolism b1415 NEW ONES in Category 6 b1415 ALDBR [c] : 1.0 h2o + 1.0 lald-L + 1.0 nad <==> 2.0 h + 1.0 lac-L + 1.0 nadh b3588 b3588 Alternate Carbon Metabolism b3588 Alon Changes b3588 ADHC1R [c] : 1.0 h2o + 1.0 lald-L + 1.0 nad <==> 2.0 h + 1.0 lac-L + 1.0 nadh on b0356 Alternate Carbon Metabolism on " *EWB (no regulation given previously, assumed on)" on ADHC2R [c] : 1.0 glyald + 1.0 h + 1.0 nadh <==> 1.0 glyc + 1.0 nad on b0356 Alternate Carbon Metabolism on " *EWB (no regulation given previously, assumed on)" on ADHE1 [c] : 1.0 h2o + 1.0 lald-L + 1.0 nad ==> 2.0 h + 1.0 lac-L + 1.0 nadh b1241 b1241 Alternate Carbon Metabolism b1241 Alon Changes b1241 ALDH1R [c] : 1.0 h2o + 1.0 lald-L + 1.0 nad <==> 2.0 h + 1.0 lac-L + 1.0 nadh on b1300 Alternate Carbon Metabolism on " *EWB (no regulation given previously, assumed on)" on ALDH2 [c] : 1.0 acald + 1.0 h2o + 1.0 nad ==> 1.0 ac + 2.0 h + 1.0 nadh on b1300 Alternate Carbon Metabolism on " *EWB (no regulation given previously, assumed on)" on GNTV [c] : 1.0 atp + 1.0 glcn ==> 1.0 6pgc + 1.0 adp + 1.0 h on b4268 Alternate Carbon Metabolism on " *EWB (no regulation given previously, assumed on)" on GNTK [c] : 1.0 atp + 1.0 glcn ==> 1.0 6pgc + 1.0 adp + 1.0 h b3437 b3437 Alternate Carbon Metabolism b3437 Alon Changes b3437 RHAAR [c] : 1.0 rmn <==> 1.0 rml b3903 b3903 Alternate Carbon Metabolism b3903 "The Rest section in the Excel sheet MWC March 29, 2003" b3903 RHAB [c] : 1.0 atp + 1.0 rml ==> 1.0 adp + 1.0 h + 1.0 rml1p b3904 b3904 Alternate Carbon Metabolism b3904 "The Rest section in the Excel sheet MWC March 29, 2003" b3904 RHADR [c] : 1.0 rml1p <==> 1.0 dhap + 1.0 lald-L b3902 b3902 Alternate Carbon Metabolism b3902 "The Rest section in the Excel sheet MWC March 29, 2003" b3902 ARAAR [c] : 1.0 arab-L <==> 1.0 rbl-L b0062 b0062 Alternate Carbon Metabolism b0062 "The Rest section in the Excel sheet MWC March 29, 2003" b0062 A5PISOR [c] : 1.0 ru5p-D <==> 1.0 ara5p on b3197 OR b2708 Alternate Carbon Metabolism on " *EWB (no regulation given previously, assumed on)" on ARAB [c] : 1.0 atp + 1.0 rbl-L ==> 1.0 adp + 1.0 h + 1.0 ru5p-L b0063 b0063 Alternate Carbon Metabolism b0063 "The Rest section in the Excel sheet MWC March 29, 2003" b0063 ARADR [c] : 1.0 ru5p-L <==> 1.0 xu5p-D b0061 b0061 Alternate Carbon Metabolism b0061 "The Rest section in the Excel sheet MWC March 29, 2003" b0061 XYLA2R [c] : 1.0 xyl-D <==> 1.0 xylu-D b3565 b3565 Alternate Carbon Metabolism b3565 "The Rest section in the Excel sheet MWC March 29, 2003" b3565 XYLB1 [c] : 1.0 atp + 1.0 xylu-D ==> 1.0 adp + 1.0 h + 1.0 xu5p-D b3564 b3564 Alternate Carbon Metabolism b3564 "The Rest section in the Excel sheet MWC March 29, 2003" b3564 MTLDR [c] : 1.0 mnl1p + 1.0 nad <==> 1.0 f6p + 1.0 h + 1.0 nadh b3600 b3600 Alternate Carbon Metabolism b3600 Catabolite Repression from Paigen and Park b3600 SRLDR [c] : 1.0 nad + 1.0 sbt6p <==> 1.0 f6p + 1.0 h + 1.0 nadh b2705 b2705 Alternate Carbon Metabolism b2705 Catabolite Repression from Paigen and Park b2705 GATDR [c] : 1.0 galt1p + 1.0 nad <==> 1.0 h + 1.0 nadh + 1.0 tag6p-D b2091 b2091 Alternate Carbon Metabolism b2091 Catabolite Repression from Paigen and Park b2091 PFKB2 [c] : 1.0 atp + 1.0 tag6p-D ==> 1.0 adp + 1.0 h + 1.0 tagdp-D on b1723 Alternate Carbon Metabolism on " *EWB (no regulation given previously, assumed on)" on FRUK2 [c] : 1.0 atp + 1.0 tag6p-D ==> 1.0 adp + 1.0 h + 1.0 tagdp-D b2168 b2168 Alternate Carbon Metabolism b2168 "The Rest section in the Excel sheet MWC March 29, 2003" b2168 AGAZ [c] : 1.0 atp + 1.0 tag6p-D ==> 1.0 adp + 1.0 h + 1.0 tagdp-D on b3132 AND b3137 AND b2095 AND b2096 Alternate Carbon Metabolism on " *EWB (no regulation given previously, assumed on)" on GATZR [c] : 1.0 tagdp-D <==> 1.0 dhap + 1.0 g3p b2095 AND b2096 b2095 AND b2096 Alternate Carbon Metabolism b2095 AND b2096 Catabolite Repression from Paigen and Park b2095 AND b2096 AGAYR [c] : 1.0 tagdp-D <==> 1.0 dhap + 1.0 g3p on b3132 AND b3137 AND b2095 AND b2096 Alternate Carbon Metabolism on " *EWB (no regulation given previously, assumed on)" on DEOB1R [c] : 1.0 2dr1p <==> 1.0 2dr5p on b4383 Alternate Carbon Metabolism b4383 "The Rest section in the Excel sheet MWC March 29, 2003" b4383 DEOB2R [c] : 1.0 r1p <==> 1.0 r5p b4383 b4383 Alternate Carbon Metabolism b4383 "The Rest section in the Excel sheet MWC March 29, 2003" b4383 DEOC [c] : 1.0 2dr5p ==> 1.0 acald + 1.0 g3p on b4381 Alternate Carbon Metabolism b4381 "The Rest section in the Excel sheet MWC March 29, 2003" b4381 PURF [c] : 1.0 gln-L + 1.0 h2o + 1.0 prpp ==> 1.0 glu-L + 1.0 ppi + 1.0 pram b2312 b2312 Purine and Pyrimidine Biosynthesis b2312 Purine and Pyrimidine Biosynthesis b2312 PURDR [c] : 1.0 atp + 1.0 gly + 1.0 pram <==> 1.0 adp + 1.0 gar + 1.0 h + 1.0 pi b4005 b4005 Purine and Pyrimidine Biosynthesis b4005 Purine and Pyrimidine Biosynthesis b4005 PURNR [c] : 1.0 10fthf + 1.0 gar <==> 1.0 fgam + 1.0 h + 1.0 thf b2500 b2500 Purine and Pyrimidine Biosynthesis b2500 Purine and Pyrimidine Biosynthesis b2500 PURT2 [c] : 1.0 atp + 1.0 for + 1.0 gar ==> 1.0 adp + 1.0 fgam + 1.0 h + 1.0 pi b1849 b1849 Purine and Pyrimidine Biosynthesis b1849 Purine and Pyrimidine Biosynthesis b1849 PURL [c] : 1.0 atp + 1.0 fgam + 1.0 gln-L + 1.0 h2o ==> 1.0 adp + 1.0 fpram + 1.0 glu-L + 1.0 h + 1.0 pi b2557 b2557 Purine and Pyrimidine Biosynthesis b2557 Purine and Pyrimidine Biosynthesis b2557 PURM [c] : 1.0 atp + 1.0 fpram ==> 1.0 adp + 1.0 air + 2.0 h + 1.0 pi b2499 b2499 Purine and Pyrimidine Biosynthesis b2499 Purine and Pyrimidine Biosynthesis b2499 PURK [c] : 1.0 air + 1.0 atp + 1.0 hco3 ==> 1.0 5caiz + 1.0 adp + 1.0 h + 1.0 pi b0522 b0522 Purine and Pyrimidine Biosynthesis b0522 Purine and Pyrimidine Biosynthesis b0522 PURER [c] : 1.0 5aizc <==> 1.0 5caiz b0523 b0523 Purine and Pyrimidine Biosynthesis b0523 Purine and Pyrimidine Biosynthesis b0523 PURCR [c] : 1.0 5aizc + 1.0 asp-L + 1.0 atp <==> 1.0 25aics + 1.0 adp + 1.0 h + 1.0 pi b2476 b2476 Purine and Pyrimidine Biosynthesis b2476 Purine and Pyrimidine Biosynthesis b2476 PURB1R [c] : 1.0 25aics <==> 1.0 aicar + 1.0 fum b1131 b1131 Purine and Pyrimidine Biosynthesis b1131 Alon Changes b1131 PURH1R [c] : 1.0 10fthf + 1.0 aicar <==> 1.0 fprica + 1.0 thf on b4006 Purine and Pyrimidine Biosynthesis on " *EWB (no regulation given previously, assumed on)" on PURH2R [c] : 1.0 h2o + 1.0 imp <==> 1.0 fprica on b4006 Purine and Pyrimidine Biosynthesis on " *EWB (no regulation given previously, assumed on)" on PURA [c] : 1.0 asp-L + 1.0 gtp + 1.0 imp ==> 1.0 dcamp + 1.0 gdp + 2.0 h + 1.0 pi b4177 b4177 Purine and Pyrimidine Biosynthesis b4177 Alon Changes b4177 PURB2R [c] : 1.0 dcamp <==> 1.0 amp + 1.0 fum b1131 b1131 Purine and Pyrimidine Biosynthesis b1131 Alon Changes b1131 GUAB [c] : 1.0 h2o + 1.0 imp + 1.0 nad ==> 1.0 h + 1.0 nadh + 1.0 xmp b2508 b2508 Purine and Pyrimidine Biosynthesis b2508 Purine and Pyrimidine Biosynthesis b2508 GUAA [c] : 1.0 atp + 1.0 gln-L + 1.0 h2o + 1.0 xmp ==> 1.0 amp + 1.0 glu-L + 1.0 gmp + 2.0 h + 1.0 ppi b2507 b2507 Purine and Pyrimidine Biosynthesis b2507 Purine and Pyrimidine Biosynthesis b2507 GUAC [c] : 1.0 gmp + 2.0 h + 1.0 nadph ==> 1.0 imp + 1.0 nadp + 1.0 nh4 b0104 b0104 Purine and Pyrimidine Biosynthesis b0104 Purine and Pyrimidine Biosynthesis b0104 PYRB [c] : 1.0 asp-L + 1.0 cbp ==> 1.0 cbasp + 1.0 h + 1.0 pi b4244 AND b4245 b4244 AND b4245 Purine and Pyrimidine Biosynthesis b4244 AND b4245 Purine and Pyrimidine Biosynthesis b4244 AND b4245 PYRCR [c] : 1.0 dhor-S + 1.0 h2o <==> 1.0 cbasp + 1.0 h b1062 b1062 Purine and Pyrimidine Biosynthesis b1062 Alon Changes b1062 PYRD1 [c] : 1.0 dhor-S + 1.0 q8 ==> 1.0 orot + 1.0 q8h2 b0945 b0945 Purine and Pyrimidine Biosynthesis b0945 Alon Changes b0945 PYRER [c] : 1.0 orot5p + 1.0 ppi <==> 1.0 orot + 1.0 prpp b0945 b0945 Purine and Pyrimidine Biosynthesis b0945 Alon Changes b0945 PYRF [c] : 1.0 h + 1.0 orot5p ==> 1.0 co2 + 1.0 ump b3642 b3642 Purine and Pyrimidine Biosynthesis b3642 Purine and Pyrimidine Biosynthesis b3642 PYRG [c] : 1.0 atp + 1.0 gln-L + 1.0 h2o + 1.0 utp ==> 1.0 adp + 1.0 ctp + 1.0 glu-L + 2.0 h + 1.0 pi on b2780 Purine and Pyrimidine Biosynthesis on " *EWB (no regulation given previously, assumed on)" on ADK2R [c] : 1.0 amp + 1.0 gtp <==> 1.0 adp + 1.0 gdp on b0474 Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on ADK3R [c] : 1.0 amp + 1.0 itp <==> 1.0 adp + 1.0 idp on b0474 Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on ADK4R [c] : 1.0 atp + 1.0 damp <==> 1.0 adp + 1.0 dadp on b0474 Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on GMK1R [c] : 1.0 atp + 1.0 gmp <==> 1.0 adp + 1.0 gdp on b3648 Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on GMK2R [c] : 1.0 atp + 1.0 dgmp <==> 1.0 adp + 1.0 dgdp on b3648 Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on NDK2R [c] : 1.0 atp + 1.0 udp <==> 1.0 adp + 1.0 utp on b2518 Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on NDK3R [c] : 1.0 atp + 1.0 cdp <==> 1.0 adp + 1.0 ctp on b2518 Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on NDK5R [c] : 1.0 atp + 1.0 dgdp <==> 1.0 adp + 1.0 dgtp on b2518 Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on NDK6R [c] : 1.0 atp + 1.0 dudp <==> 1.0 adp + 1.0 dutp on b2518 Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on NDK7R [c] : 1.0 atp + 1.0 dcdp <==> 1.0 adp + 1.0 dctp on b2518 Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on NDK9R [c] : 1.0 atp + 1.0 dadp <==> 1.0 adp + 1.0 datp on b2518 Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on NDK0R [c] : 1.0 atp + 1.0 dtdp <==> 1.0 adp + 1.0 dttp on b2518 Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on AMN [c] : 1.0 amp + 1.0 h2o ==> 1.0 ade + 1.0 r5p on b1982 Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on ADD1 [c] : 1.0 adn + 1.0 h + 1.0 h2o ==> 1.0 ins + 1.0 nh4 b1623 b1623 Nucleotide Salvage Pathways b1623 Purine-Pyrimidine Salvage and Transport b1623 ADD2 [c] : 1.0 dad-2 + 1.0 h + 1.0 h2o ==> 1.0 din + 1.0 nh4 b1623 b1623 Nucleotide Salvage Pathways b1623 Purine-Pyrimidine Salvage and Transport b1623 YICP [c] : 1.0 ade + 1.0 h + 1.0 h2o ==> 1.0 hxan + 1.0 nh4 on b3665 Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on GSK1 [c] : 1.0 atp + 1.0 ins ==> 1.0 adp + 1.0 h + 1.0 imp on b0477 Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on GSK2 [c] : 1.0 atp + 1.0 gsn ==> 1.0 adp + 1.0 gmp + 1.0 h on b0477 Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on ADKIN [c] : 1.0 adn + 1.0 atp ==> 1.0 adp + 1.0 amp + 1.0 h on Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on APT [c] : 1.0 ade + 1.0 prpp ==> 1.0 amp + 1.0 ppi on b0469 Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on GPT1 [c] : 1.0 prpp + 1.0 xan ==> 1.0 ppi + 1.0 xmp on b0238 Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on GPT2 [c] : 1.0 hxan + 1.0 prpp ==> 1.0 imp + 1.0 ppi on b0238 Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on HPT1 [c] : 1.0 hxan + 1.0 prpp ==> 1.0 imp + 1.0 ppi b0125 b0125 Nucleotide Salvage Pathways b0125 Purine-Pyrimidine Salvage and Transport b0125 GPT3 [c] : 1.0 gua + 1.0 prpp ==> 1.0 gmp + 1.0 ppi on b0238 Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on HPT2 [c] : 1.0 gua + 1.0 prpp ==> 1.0 gmp + 1.0 ppi b0125 b0125 Nucleotide Salvage Pathways b0125 Purine-Pyrimidine Salvage and Transport b0125 XAPA1R [c] : 1.0 din + 1.0 pi <==> 1.0 2dr1p + 1.0 hxan b2407 b2407 Nucleotide Salvage Pathways b2407 Purine-Pyrimidine Salvage and Transport b2407 DEOD1R [c] : 1.0 din + 1.0 pi <==> 1.0 2dr1p + 1.0 hxan on b4384 Nucleotide Salvage Pathways b4384 Alon Changes b4384 XAPA2R [c] : 1.0 dad-2 + 1.0 pi <==> 1.0 2dr1p + 1.0 ade b2407 b2407 Nucleotide Salvage Pathways b2407 Purine-Pyrimidine Salvage and Transport b2407 DEOD2R [c] : 1.0 dad-2 + 1.0 pi <==> 1.0 2dr1p + 1.0 ade on b4384 Nucleotide Salvage Pathways b4384 Alon Changes b4384 XAPA3R [c] : 1.0 dgsn + 1.0 pi <==> 1.0 2dr1p + 1.0 gua b2407 b2407 Nucleotide Salvage Pathways b2407 Purine-Pyrimidine Salvage and Transport b2407 DEOD3R [c] : 1.0 dgsn + 1.0 pi <==> 1.0 2dr1p + 1.0 gua b4384 b4384 Nucleotide Salvage Pathways b4384 Alon Changes b4384 XAPA4R [c] : 1.0 ins + 1.0 pi <==> 1.0 hxan + 1.0 r1p b2407 b2407 Nucleotide Salvage Pathways b2407 Purine-Pyrimidine Salvage and Transport b2407 DEOD4R [c] : 1.0 ins + 1.0 pi <==> 1.0 hxan + 1.0 r1p b4384 b4384 Nucleotide Salvage Pathways b4384 Alon Changes b4384 XAPA5R [c] : 1.0 adn + 1.0 pi <==> 1.0 ade + 1.0 r1p b2407 b2407 Nucleotide Salvage Pathways b2407 Purine-Pyrimidine Salvage and Transport b2407 DEOD5R [c] : 1.0 adn + 1.0 pi <==> 1.0 ade + 1.0 r1p b4384 b4384 Nucleotide Salvage Pathways b4384 Alon Changes b4384 XAPA6R [c] : 1.0 gsn + 1.0 pi <==> 1.0 gua + 1.0 r1p b2407 b2407 Nucleotide Salvage Pathways b2407 Purine-Pyrimidine Salvage and Transport b2407 DEOD6R [c] : 1.0 gsn + 1.0 pi <==> 1.0 gua + 1.0 r1p b4384 b4384 Nucleotide Salvage Pathways b4384 Alon Changes b4384 XAPA7R 1.0 pi[c] + 1.0 xtsn[c] <==> 1.0 r1p[c] + 1.0 xan[c] b2407 b2407 Nucleotide Salvage Pathways b2407 Purine-Pyrimidine Salvage and Transport b2407 DEOD7R 1.0 pi[c] + 1.0 xtsn[c] <==> 1.0 r1p[c] + 1.0 xan[c] b4384 b4384 Nucleotide Salvage Pathways b4384 Alon Changes b4384 UDPR [c] : 1.0 pi + 1.0 uri <==> 1.0 r1p + 1.0 ura b3831 b3831 Nucleotide Salvage Pathways b3831 Purine-Pyrimidine Salvage and Transport b3831 DEOA1R [c] : 1.0 duri + 1.0 pi <==> 1.0 2dr1p + 1.0 ura b4382 b4382 Nucleotide Salvage Pathways b4382 Purine-Pyrimidine Salvage and Transport b4382 DEOD8R [c] : 1.0 duri + 1.0 pi <==> 1.0 2dr1p + 1.0 ura b4384 b4384 Nucleotide Salvage Pathways b4384 Alon Changes b4384 DEOA2R [c] : 1.0 pi + 1.0 thymd <==> 1.0 2dr1p + 1.0 thym b4382 b4382 Nucleotide Salvage Pathways b4382 Purine-Pyrimidine Salvage and Transport b4382 CMKA1R [c] : 1.0 atp + 1.0 dcmp <==> 1.0 adp + 1.0 dcdp on b0910 Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on CMKA2R [c] : 1.0 atp + 1.0 cmp <==> 1.0 adp + 1.0 cdp on b0910 Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on CMKB3R [c] : 1.0 atp + 1.0 ump <==> 1.0 adp + 1.0 udp on b0171 Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on TMKR [c] : 1.0 atp + 1.0 dtmp <==> 1.0 adp + 1.0 dtdp on b1098 Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on PYRH1R [c] : 1.0 atp + 1.0 ump <==> 1.0 adp + 1.0 udp on b0171 Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on PYRH2R [c] : 1.0 atp + 1.0 dump <==> 1.0 adp + 1.0 dudp on b0171 Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on TDK1 [c] : 1.0 atp + 1.0 duri ==> 1.0 adp + 1.0 dump + 1.0 h on b1238 Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on UPP [c] : 1.0 prpp + 1.0 ura ==> 1.0 ppi + 1.0 ump on b2498 Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on CODA [c] : 1.0 csn + 1.0 h + 1.0 h2o ==> 1.0 nh4 + 1.0 ura b0337 b0337 Nucleotide Salvage Pathways b0337 Purine-Pyrimidine Salvage and Transport b0337 UDK1 [c] : 1.0 gtp + 1.0 uri ==> 1.0 gdp + 1.0 h + 1.0 ump b2066 b2066 Nucleotide Salvage Pathways b2066 Purine-Pyrimidine Salvage and Transport b2066 UDK2 [c] : 1.0 cytd + 1.0 gtp ==> 1.0 cmp + 1.0 gdp + 1.0 h b2066 b2066 Nucleotide Salvage Pathways b2066 Purine-Pyrimidine Salvage and Transport b2066 CMPGLYS [c] : 1.0 cmp + 1.0 h2o ==> 1.0 csn + 1.0 r5p on Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on CDD1 [c] : 1.0 cytd + 1.0 h + 1.0 h2o ==> 1.0 nh4 + 1.0 uri b2143 b2143 Nucleotide Salvage Pathways b2143 Purine-Pyrimidine Salvage and Transport b2143 TDK2 [c] : 1.0 atp + 1.0 thymd ==> 1.0 adp + 1.0 dtmp + 1.0 h on b1238 Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on DCD [c] : 1.0 dctp + 1.0 h + 1.0 h2o ==> 1.0 dutp + 1.0 nh4 on b2065 Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on CDD2 [c] : 1.0 dcyt + 1.0 h + 1.0 h2o ==> 1.0 duri + 1.0 nh4 b2143 b2143 Nucleotide Salvage Pathways b2143 Purine-Pyrimidine Salvage and Transport b2143 USHA1 [c] : 1.0 dump + 1.0 h2o ==> 1.0 duri + 1.0 pi on b0480 Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on USHA2 [c] : 1.0 dtmp + 1.0 h2o ==> 1.0 pi + 1.0 thymd on b0480 Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on USHA3 [c] : 1.0 damp + 1.0 h2o ==> 1.0 dad-2 + 1.0 pi on b0480 Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on USHA4 [c] : 1.0 dgmp + 1.0 h2o ==> 1.0 dgsn + 1.0 pi on b0480 Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on USHA5 [c] : 1.0 dcmp + 1.0 h2o ==> 1.0 dcyt + 1.0 pi on b0480 Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on USHA6 [c] : 1.0 cmp + 1.0 h2o ==> 1.0 cytd + 1.0 pi on b0480 Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on USHA7 [c] : 1.0 amp + 1.0 h2o ==> 1.0 adn + 1.0 pi on b0480 Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on USHA8 [c] : 1.0 gmp + 1.0 h2o ==> 1.0 gsn + 1.0 pi on b0480 Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on USHA9 [c] : 1.0 h2o + 1.0 imp ==> 1.0 ins + 1.0 pi on b0480 Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on USHA12 1.0 h2o[c] + 1.0 xmp[c] ==> 1.0 pi[c] + 1.0 xtsn[c] on b0480 Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on USHA11 [c] : 1.0 h2o + 1.0 ump ==> 1.0 pi + 1.0 uri on b0480 Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on NRDA1 [c] : 1.0 adp + 1.0 trdrd ==> 1.0 dadp + 1.0 h2o + 1.0 trdox b2234 AND b2235 b2234 AND b2235 Nucleotide Salvage Pathways b2234 AND b2235 Purine-Pyrimidine Salvage and Transport b2234 AND b2235 NRDA2 [c] : 1.0 gdp + 1.0 trdrd ==> 1.0 dgdp + 1.0 h2o + 1.0 trdox b2234 AND b2235 b2234 AND b2235 Nucleotide Salvage Pathways b2234 AND b2235 Purine-Pyrimidine Salvage and Transport b2234 AND b2235 NRDD1 [c] : 1.0 atp + 1.0 trdrd ==> 1.0 datp + 1.0 h2o + 1.0 trdox b4238 b4238 Nucleotide Salvage Pathways b4238 Purine-Pyrimidine Salvage and Transport b4238 NRDD2 [c] : 1.0 gtp + 1.0 trdrd ==> 1.0 dgtp + 1.0 h2o + 1.0 trdox b4238 b4238 Nucleotide Salvage Pathways b4238 Purine-Pyrimidine Salvage and Transport b4238 NRDA3 [c] : 1.0 cdp + 1.0 trdrd ==> 1.0 dcdp + 1.0 h2o + 1.0 trdox b2234 AND b2235 b2234 AND b2235 Nucleotide Salvage Pathways b2234 AND b2235 Purine-Pyrimidine Salvage and Transport b2234 AND b2235 NRDE [c] : 1.0 cdp + 1.0 trdrd ==> 1.0 dcdp + 1.0 h2o + 1.0 trdox b2675 AND b2676 b2675 AND b2676 Nucleotide Salvage Pathways b2675 AND b2676 NEW ONES in Category 6 b2675 AND b2676 NRDA4 [c] : 1.0 trdrd + 1.0 udp ==> 1.0 dudp + 1.0 h2o + 1.0 trdox b2234 AND b2235 b2234 AND b2235 Nucleotide Salvage Pathways b2234 AND b2235 Purine-Pyrimidine Salvage and Transport b2234 AND b2235 NRDD3 [c] : 1.0 ctp + 1.0 trdrd ==> 1.0 dctp + 1.0 h2o + 1.0 trdox b4238 b4238 Nucleotide Salvage Pathways b4238 Purine-Pyrimidine Salvage and Transport b4238 NRDD4 [c] : 1.0 trdrd + 1.0 utp ==> 1.0 dutp + 1.0 h2o + 1.0 trdox b4238 b4238 Nucleotide Salvage Pathways b4238 Purine-Pyrimidine Salvage and Transport b4238 DUT [c] : 1.0 dutp + 1.0 h2o ==> 1.0 dump + 1.0 h + 1.0 ppi on b3640 Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on THYA [c] : 1.0 dump + 1.0 mlthf ==> 1.0 dhf + 1.0 dtmp on b2827 Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on MUTT1 [c] : 1.0 gtp + 1.0 h2o ==> 1.0 gmp + 1.0 h + 1.0 ppi on b0099 Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on MUTT2 [c] : 1.0 dgtp + 1.0 h2o ==> 1.0 dgmp + 1.0 h + 1.0 ppi on b0099 Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on DGT1 [c] : 1.0 dgtp + 1.0 h2o ==> 1.0 dgsn + 1.0 pppi on b0160 Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on DGT2 [c] : 1.0 gtp + 1.0 h2o ==> 1.0 gsn + 1.0 pppi on b0160 Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on PURU [c] : 1.0 10fthf + 1.0 h2o ==> 1.0 for + 1.0 h + 1.0 thf on b1232 Folate Metabolism on " *EWB (no regulation given previously, assumed on)" on METF [c] : 1.0 h + 1.0 mlthf + 1.0 nadh ==> 1.0 5mthf + 1.0 nad on b3941 Folate Metabolism on " *EWB (no regulation given previously, assumed on)" on FOLD1R [c] : 1.0 mlthf + 1.0 nadp <==> 1.0 h + 1.0 methf + 1.0 nadph on b0529 Folate Metabolism on " *EWB (no regulation given previously, assumed on)" on FOLD2R [c] : 1.0 h2o + 1.0 methf <==> 1.0 10fthf on b0529 Folate Metabolism on " *EWB (no regulation given previously, assumed on)" on ACCAR [c] : 1.0 accoa + 1.0 atp + 1.0 hco3 <==> 1.0 adp + 1.0 h + 1.0 malcoa + 1.0 pi on b0185 AND b3255 AND b3256 AND b2316 Membrane Lipid Metabolism on " *EWB (no regulation given previously, assumed on)" on FADD1R [c] : 1.0 ACP + 1.0 malcoa <==> 1.0 coa + 1.0 malACP b1092 b1092 Membrane Lipid Metabolism b1092 Fatty Acid (JR) b1092 FABB1 [c] : 1.0 h + 1.0 malACP ==> 1.0 acACP + 1.0 co2 on b2323 Membrane Lipid Metabolism on " *EWB (no regulation given previously, assumed on)" on FABH1R [c] : 1.0 ACP + 1.0 accoa <==> 1.0 acACP + 1.0 coa b1091 b1091 Membrane Lipid Metabolism b1091 Fatty Acid (JR) b1091 FABB2 [c] : 1.0 acACP + 1.0 h + 1.0 malACP ==> 1.0 ACP + 1.0 actACP + 1.0 co2 on b2323 Membrane Lipid Metabolism on " *EWB (no regulation given previously, assumed on)" on FABF [c] : 1.0 acACP + 1.0 h + 1.0 malACP ==> 1.0 ACP + 1.0 actACP + 1.0 co2 on b1095 Membrane Lipid Metabolism on " *EWB (no regulation given previously, assumed on)" on FABH2 [c] : 1.0 accoa + 1.0 h + 1.0 malACP ==> 1.0 actACP + 1.0 co2 + 1.0 coa b1091 b1091 Membrane Lipid Metabolism b1091 Fatty Acid (JR) b1091 C120SN [c] : 1.0 actACP + 14.0 h + 4.0 malACP + 10.0 nadph ==> 4.0 ACP + 4.0 co2 + 1.0 ddcaACP + 5.0 h2o + 10.0 nadp b0954 AND b1093 AND b1288 AND b2323 b0954 AND b1093 AND b1288 AND b2323 Membrane Lipid Metabolism b0954 AND b1093 AND b1288 AND b2323 Alon Changes b0954 AND b1093 AND b1288 AND b2323 C140SN [c] : 1.0 actACP + 17.0 h + 5.0 malACP + 12.0 nadph ==> 5.0 ACP + 5.0 co2 + 6.0 h2o + 1.0 myrsACP + 12.0 nadp b0954 AND b1093 AND b1288 AND b2323 b0954 AND b1093 AND b1288 AND b2323 Membrane Lipid Metabolism b0954 AND b1093 AND b1288 AND b2323 Alon Changes b0954 AND b1093 AND b1288 AND b2323 C141SY [c] : 1.0 actACP + 16.0 h + 5.0 malACP + 11.0 nadph ==> 5.0 ACP + 5.0 co2 + 6.0 h2o + 11.0 nadp + 1.0 tdeACP b0180 AND b0954 AND b1093 AND b1288 AND b2323 b0180 AND b0954 AND b1093 AND b1288 AND b2323 Membrane Lipid Metabolism b0180 AND b0954 AND b1093 AND b1288 AND b2323 Alon Changes b0180 AND b0954 AND b1093 AND b1288 AND b2323 C160SN [c] : 1.0 actACP + 20.0 h + 6.0 malACP + 14.0 nadph ==> 6.0 ACP + 6.0 co2 + 7.0 h2o + 14.0 nadp + 1.0 palmACP b0954 AND b1093 AND b1288 AND b2323 b0954 AND b1093 AND b1288 AND b2323 Membrane Lipid Metabolism b0954 AND b1093 AND b1288 AND b2323 Alon Changes b0954 AND b1093 AND b1288 AND b2323 C161SY [c] : 1.0 actACP + 19.0 h + 6.0 malACP + 13.0 nadph ==> 6.0 ACP + 6.0 co2 + 7.0 h2o + 1.0 hdeACP + 13.0 nadp b0180 AND b0954 AND b1093 AND b1288 AND b2323 b0180 AND b0954 AND b1093 AND b1288 AND b2323 Membrane Lipid Metabolism b0180 AND b0954 AND b1093 AND b1288 AND b2323 Alon Changes b0180 AND b0954 AND b1093 AND b1288 AND b2323 C181SY [c] : 1.0 actACP + 22.0 h + 7.0 malACP + 15.0 nadph ==> 7.0 ACP + 7.0 co2 + 8.0 h2o + 15.0 nadp + 1.0 octeACP b0180 AND b0954 AND b1093 AND b1095 AND b1288 AND b2323 b0180 AND b0954 AND b1093 AND b1095 AND b1288 AND b2323 Membrane Lipid Metabolism b0180 AND b0954 AND b1093 AND b1095 AND b1288 AND b2323 Alon Changes b0180 AND b0954 AND b1093 AND b1095 AND b1288 AND b2323 C120SN2 [c] : 1.0 actACP + 14.0 h + 4.0 malACP + 10.0 nadph ==> 4.0 ACP + 4.0 co2 + 1.0 ddcaACP + 5.0 h2o + 10.0 nadp b0180 AND b1093 AND b1288 AND b2323 b0180 AND b1093 AND b1288 AND b2323 Membrane Lipid Metabolism b0180 AND b1093 AND b1288 AND b2323 Alon Changes b0180 AND b1093 AND b1288 AND b2323 C140SN2 [c] : 1.0 actACP + 17.0 h + 5.0 malACP + 12.0 nadph ==> 5.0 ACP + 5.0 co2 + 6.0 h2o + 1.0 myrsACP + 12.0 nadp b0180 AND b1093 AND b1288 AND b2323 b0180 AND b1093 AND b1288 AND b2323 Membrane Lipid Metabolism b0180 AND b1093 AND b1288 AND b2323 Alon Changes b0180 AND b1093 AND b1288 AND b2323 C160SN2 [c] : 1.0 actACP + 20.0 h + 6.0 malACP + 14.0 nadph ==> 6.0 ACP + 6.0 co2 + 7.0 h2o + 14.0 nadp + 1.0 palmACP b0180 AND b1093 AND b1288 AND b2323 b0180 AND b1093 AND b1288 AND b2323 Membrane Lipid Metabolism b0180 AND b1093 AND b1288 AND b2323 Alon Changes b0180 AND b1093 AND b1288 AND b2323 C120SN3 [c] : 1.0 actACP + 14.0 h + 4.0 malACP + 10.0 nadph ==> 4.0 ACP + 4.0 co2 + 1.0 ddcaACP + 5.0 h2o + 10.0 nadp b0180 AND b1093 AND b1095 AND b1288 b0180 AND b1093 AND b1095 AND b1288 Membrane Lipid Metabolism b0180 AND b1093 AND b1095 AND b1288 Alon Changes b0180 AND b1093 AND b1095 AND b1288 C140SN3 [c] : 1.0 actACP + 17.0 h + 5.0 malACP + 12.0 nadph ==> 5.0 ACP + 5.0 co2 + 6.0 h2o + 1.0 myrsACP + 12.0 nadp b0180 AND b1093 AND b1095 AND b1288 b0180 AND b1093 AND b1095 AND b1288 Membrane Lipid Metabolism b0180 AND b1093 AND b1095 AND b1288 Alon Changes b0180 AND b1093 AND b1095 AND b1288 C160SN3 [c] : 1.0 actACP + 20.0 h + 6.0 malACP + 14.0 nadph ==> 6.0 ACP + 6.0 co2 + 7.0 h2o + 14.0 nadp + 1.0 palmACP b0180 AND b1093 AND b1095 AND b1288 b0180 AND b1093 AND b1095 AND b1288 Membrane Lipid Metabolism b0180 AND b1093 AND b1095 AND b1288 Alon Changes b0180 AND b1093 AND b1095 AND b1288 C120SN4 [c] : 1.0 actACP + 14.0 h + 4.0 malACP + 10.0 nadph ==> 4.0 ACP + 4.0 co2 + 1.0 ddcaACP + 5.0 h2o + 10.0 nadp b0954 AND b1093 AND b1095 AND b1288 b0954 AND b1093 AND b1095 AND b1288 Membrane Lipid Metabolism b0954 AND b1093 AND b1095 AND b1288 Alon Changes b0954 AND b1093 AND b1095 AND b1288 C140SN4 [c] : 1.0 actACP + 17.0 h + 5.0 malACP + 12.0 nadph ==> 5.0 ACP + 5.0 co2 + 6.0 h2o + 1.0 myrsACP + 12.0 nadp b0954 AND b1093 AND b1095 AND b1288 b0954 AND b1093 AND b1095 AND b1288 Membrane Lipid Metabolism b0954 AND b1093 AND b1095 AND b1288 Alon Changes b0954 AND b1093 AND b1095 AND b1288 C160SN4 [c] : 1.0 actACP + 20.0 h + 6.0 malACP + 14.0 nadph ==> 6.0 ACP + 6.0 co2 + 7.0 h2o + 14.0 nadp + 1.0 palmACP b0954 AND b1093 AND b1095 AND b1288 b0954 AND b1093 AND b1095 AND b1288 Membrane Lipid Metabolism b0954 AND b1093 AND b1095 AND b1288 Alon Changes b0954 AND b1093 AND b1095 AND b1288 FABBG [c] : 1.0 ddcaACP + 2.0 h + 1.0 malACP + 1.0 nadph ==> 1.0 3hmrsACP + 1.0 ACP + 1.0 co2 + 1.0 nadp on b2323 Membrane Lipid Metabolism on " *EWB (no regulation given previously, assumed on)" on FABFG [c] : 1.0 ddcaACP + 2.0 h + 1.0 malACP + 1.0 nadph ==> 1.0 3hmrsACP + 1.0 ACP + 1.0 co2 + 1.0 nadp on b1095 AND b1093 Membrane Lipid Metabolism on " *EWB (no regulation given previously, assumed on)" on PLS [c] : 1.0 glyc3p + 0.14 hdeACP + 0.04 myrsACP + 1.0 octeACP + 0.72 palmACP + 0.1 tdeACP ==> 2.0 ACP + 0.02 pa_EC on b4041 AND b3018 Membrane Lipid Metabolism on " *EWB (no regulation given previously, assumed on)" on CDSAR [c] : 1.0 ctp + 1.0 h + 0.02 pa_EC <==> 0.02 cdpdag1 + 1.0 ppi on b0175 Membrane Lipid Metabolism on " *EWB (no regulation given previously, assumed on)" on CDH [c] : 0.02 cdpdag1 + 1.0 h2o ==> 1.0 cmp + 2.0 h + 0.02 pa_EC on b3918 Membrane Lipid Metabolism on " *EWB (no regulation given previously, assumed on)" on PSSAR [c] : 0.02 cdpdag1 + 1.0 ser-L <==> 1.0 cmp + 1.0 h + 0.02 ps_EC on b2585 Membrane Lipid Metabolism on " *EWB (no regulation given previously, assumed on)" on PSD [c] : 1.0 h + 0.02 ps_EC ==> 1.0 co2 + 0.02 pe_EC b4160 b4160 Membrane Lipid Metabolism b4160 b4160 PGSAR [c] : 0.02 cdpdag1 + 1.0 glyc3p <==> 1.0 cmp + 1.0 h + 0.02 pgp_EC on b1912 Membrane Lipid Metabolism on " *EWB (no regulation given previously, assumed on)" on PGPA [c] : 1.0 h2o + 0.02 pgp_EC ==> 0.02 pg_EC + 1.0 pi on b0418 Membrane Lipid Metabolism on " *EWB (no regulation given previously, assumed on)" on PGPB [c] : 1.0 h2o + 0.02 pgp_EC ==> 0.02 pg_EC + 1.0 pi on b1278 Membrane Lipid Metabolism on " *EWB (no regulation given previously, assumed on)" on CLSR [c] : 0.04 pg_EC <==> 0.02 clpn_EC + 1.0 glyc on b1249 Membrane Lipid Metabolism on " *EWB (no regulation given previously, assumed on)" on ATOBR [c] : 2.0 accoa <==> 1.0 aacoa + 1.0 coa b2224 b2224 Membrane Lipid Metabolism b2224 Fatty Acid (JR) b2224 C140DG [c] : 1.0 atp + 7.0 coa + 6.0 fad + 6.0 h2o + 6.0 nad + 1.0 ttdca ==> 7.0 accoa + 1.0 amp + 6.0 fadh2 + 6.0 h + 6.0 nadh + 1.0 ppi b0221 AND b1805 AND b3845 AND b3846 b0221 AND b1805 AND b3845 AND b3846 Membrane Lipid Metabolism b0221 AND b1805 AND b3845 AND b3846 Alon Changes b0221 AND b1805 AND b3845 AND b3846 C160DG [c] : 1.0 atp + 8.0 coa + 7.0 fad + 7.0 h2o + 1.0 hdca + 7.0 nad ==> 8.0 accoa + 1.0 amp + 7.0 fadh2 + 7.0 h + 7.0 nadh + 1.0 ppi b0221 AND b1805 AND b3845 AND b3846 b0221 AND b1805 AND b3845 AND b3846 Membrane Lipid Metabolism b0221 AND b1805 AND b3845 AND b3846 Alon Changes b0221 AND b1805 AND b3845 AND b3846 C180DG [c] : 1.0 atp + 9.0 coa + 8.0 fad + 8.0 h2o + 8.0 nad + 1.0 ocdca ==> 9.0 accoa + 1.0 amp + 8.0 fadh2 + 8.0 h + 8.0 nadh + 1.0 ppi b0221 AND b1805 AND b3845 AND b3846 b0221 AND b1805 AND b3845 AND b3846 Membrane Lipid Metabolism b0221 AND b1805 AND b3845 AND b3846 Alon Changes b0221 AND b1805 AND b3845 AND b3846 DXS [c] : 1.0 g3p + 1.0 h + 1.0 pyr ==> 1.0 co2 + 1.0 dxyl5p on b0420 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on DXR_ [c] : 1.0 dxyl5p + 1.0 h + 1.0 nadph ==> 1.0 2me4p + 1.0 nadp on b0173 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on ISPD [c] : 1.0 2me4p + 1.0 ctp + 1.0 h ==> 1.0 4c2me + 1.0 ppi b2747 b2747 Cofactor and Prosthetic Group Biosynthesis b2747 NEW ONES in Category 6 b2747 ISPE [c] : 1.0 4c2me + 1.0 atp ==> 1.0 2p4c2me + 1.0 adp + 1.0 h on b1208 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on ISPF [c] : 1.0 2p4c2me ==> 1.0 2mecdp + 1.0 cmp on b2746 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on GCPE [c] : 1.0 2mecdp + 1.0 h ==> 1.0 h2mb4p + 1.0 h2o on b2515 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on LYTB1 [c] : 1.0 h + 1.0 h2mb4p + 1.0 nadh ==> 1.0 h2o + 1.0 ipdp + 1.0 nad on b0029 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on LYTB2 [c] : 1.0 h + 1.0 h2mb4p + 1.0 nadh ==> 1.0 dmpp + 1.0 h2o + 1.0 nad on b0029 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on IDI [c] : 1.0 ipdp ==> 1.0 dmpp on b2889 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on ISPA1 [c] : 1.0 dmpp + 1.0 ipdp ==> 1.0 grdp + 1.0 ppi on b0421 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on ISPA2 [c] : 1.0 grdp + 1.0 ipdp ==> 1.0 frdp + 1.0 ppi on b0421 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on ISPB [c] : 1.0 frdp + 5.0 ipdp ==> 1.0 octdp + 5.0 ppi on b3187 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on UPPS [c] : 1.0 frdp + 8.0 ipdp ==> 8.0 ppi + 1.0 udcpdp on b0174 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on UBIC [c] : 1.0 chor ==> 1.0 4hbz + 1.0 pyr b4039 b4039 Cofactor and Prosthetic Group Biosynthesis b4039 "The Rest section in the Excel sheet MWC March 29, 2003" b4039 UBIA [c] : 1.0 4hbz + 1.0 octdp ==> 1.0 3ophb + 1.0 ppi b4040 b4040 Cofactor and Prosthetic Group Biosynthesis b4040 "The Rest section in the Excel sheet MWC March 29, 2003" b4040 UBID [c] : 1.0 3ophb + 1.0 h ==> 1.0 2oph + 1.0 co2 on b3843 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on UBIX [c] : 1.0 3ophb + 1.0 h ==> 1.0 2oph + 1.0 co2 b2311 b2311 Cofactor and Prosthetic Group Biosynthesis b2311 Alon Changes b2311 UBIB [c] : 1.0 2oph + 0.5 o2 ==> 1.0 2ohph on b3835 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on METHRXN [c] : 1.0 2ohph + 1.0 amet ==> 1.0 2omph + 1.0 ahcys + 1.0 h b2232 b2232 Cofactor and Prosthetic Group Biosynthesis b2232 "The Rest section in the Excel sheet MWC March 29, 2003" b2232 UBIH [c] : 1.0 2omph + 0.5 o2 ==> 1.0 2ombzl on b2907 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on UBIE [c] : 1.0 2ombzl + 1.0 amet ==> 1.0 2ommbl + 1.0 ahcys + 1.0 h on b3833 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on UBIF [c] : 1.0 2ommbl + 0.5 o2 ==> 1.0 2omhmbl on b0662 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on UBIG [c] : 1.0 2omhmbl + 1.0 amet ==> 1.0 ahcys + 1.0 h + 1.0 q8h2 b2232 b2232 Cofactor and Prosthetic Group Biosynthesis b2232 "The Rest section in the Excel sheet MWC March 29, 2003" b2232 MENF [c] : 1.0 chor ==> 1.0 ichor on b2260 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on MEND1 [c] : 1.0 akg + 1.0 h + 1.0 thmpp ==> 1.0 co2 + 1.0 ssaltpp on b2264 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on MEND2 [c] : 1.0 ichor + 1.0 ssaltpp ==> 1.0 2shchc + 1.0 pyr + 1.0 thmpp on b2264 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on MENC [c] : 1.0 2shchc ==> 1.0 h2o + 1.0 sucbz on b2261 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on MENE [c] : 1.0 atp + 1.0 coa + 1.0 sucbz ==> 1.0 amp + 1.0 ppi + 1.0 sbzcoa on b2260 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on MENB [c] : 1.0 sbzcoa ==> 1.0 coa + 1.0 dhna on b3930 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on MENA [c] : 1.0 dhna + 1.0 octdp ==> 1.0 2dmmq8 + 1.0 co2 + 1.0 h + 1.0 ppi on b3930 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on MENG [c] : 1.0 2dmmq8 + 1.0 amet ==> 1.0 ahcys + 1.0 h + 1.0 mqn8 on b3929 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on ENTC [c] : 1.0 chor ==> 1.0 ichor b0593 b0593 Cofactor and Prosthetic Group Biosynthesis b0593 Alon Changes b0593 ENTB [c] : 1.0 h2o + 1.0 ichor ==> 1.0 23ddhb + 1.0 pyr b0595 b0595 Cofactor and Prosthetic Group Biosynthesis b0595 Alon Changes b0595 ENTAR [c] : 1.0 23ddhb + 1.0 nad <==> 1.0 23dhb + 1.0 h + 1.0 nadh b0596 b0596 Cofactor and Prosthetic Group Biosynthesis b0596 Alon Changes b0596 ENTER [c] : 1.0 23dhb + 1.0 atp <==> 1.0 23dhba + 1.0 ppi b0594 b0594 Cofactor and Prosthetic Group Biosynthesis b0594 Alon Changes b0594 ENTFR [c] : 1.0 atp + 1.0 h + 1.0 ser-L <==> 1.0 ppi + 1.0 seramp on b0586 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on ENTD [c] : 3.0 23dhba + 3.0 seramp ==> 6.0 amp + 1.0 enter + 6.0 h b0583 b0583 Cofactor and Prosthetic Group Biosynthesis b0583 Alon Changes b0583 RIBA [c] : 1.0 gtp + 3.0 h2o ==> 1.0 25drapp + 1.0 for + 2.0 h + 1.0 ppi on b1277 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on RIBD1 [c] : 1.0 25drapp + 1.0 h + 1.0 h2o ==> 1.0 5apru + 1.0 nh4 on b0414 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on RIBD2 [c] : 1.0 5apru + 1.0 h + 1.0 nadph ==> 1.0 5aprbu + 1.0 nadp on b0414 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on PMDPHT [c] : 1.0 5aprbu + 1.0 h2o ==> 1.0 4r5au + 1.0 pi on Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on RIBB [c] : 1.0 ru5p-D ==> 1.0 db4p + 1.0 for + 1.0 h b3041 b3041 Cofactor and Prosthetic Group Biosynthesis b3041 b3041 RIBE [c] : 1.0 4r5au + 1.0 db4p ==> 1.0 dmlz + 2.0 h2o + 1.0 pi on b0415 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on RIBC [c] : 2.0 dmlz ==> 1.0 4r5au + 1.0 ribflv on b1662 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on RIBF1 [c] : 1.0 atp + 1.0 ribflv ==> 1.0 adp + 1.0 fmn + 1.0 h on b0025 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on RIBF2 [c] : 1.0 atp + 1.0 fmn + 1.0 h ==> 1.0 fad + 1.0 ppi on b0025 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on FOLE [c] : 1.0 gtp + 1.0 h2o ==> 1.0 ahdt + 1.0 for b2153 b2153 Cofactor and Prosthetic Group Biosynthesis b2153 b2153 NTPA [c] : 1.0 ahdt + 1.0 h2o ==> 1.0 dhpmp + 1.0 h + 1.0 ppi on b1865 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on MUTT [c] : 1.0 ahdt + 1.0 h2o ==> 1.0 dhpmp + 1.0 h + 1.0 ppi on b0099 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on DHDMPD [c] : 1.0 dhpmp + 1.0 h2o ==> 1.0 dhnpt + 1.0 pi on Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on DHDNPA [c] : 1.0 dhnpt ==> 1.0 6hmhpt + 1.0 gcald on Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on FOLK [c] : 1.0 6hmhpt + 1.0 atp ==> 1.0 6hmhptpp + 1.0 amp + 1.0 h on b0142 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on PABA [c] : 1.0 chor + 1.0 gln-L ==> 1.0 4adcho + 1.0 glu-L on b3360 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on PABB [c] : 1.0 gln-L + 1.0 h2o ==> 1.0 glu-L + 1.0 nh4 on b1812 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on PABC [c] : 1.0 4adcho ==> 1.0 4abz + 1.0 h + 1.0 pyr on b1096 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on FOLP [c] : 1.0 4abz + 1.0 6hmhptpp ==> 1.0 dhpt + 1.0 h + 1.0 ppi on b3177 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on FOLC [c] : 1.0 atp + 1.0 dhpt + 1.0 glu-L ==> 1.0 adp + 1.0 dhf + 1.0 pi on b2315 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on FOLAR [c] : 1.0 dhf + 1.0 h + 1.0 nadph <==> 1.0 nadp + 1.0 thf on b0048 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on ALDA2 [c] : 1.0 gcald + 1.0 h2o + 1.0 nad ==> 1.0 glyclt + 2.0 h + 1.0 nadh b1415 b1415 Cofactor and Prosthetic Group Biosynthesis b1415 b1415 GLCD1 [c] : 1.0 glyclt + 1.0 q8 ==> 1.0 glx + 1.0 q8h2 on b2979 AND b4468 AND b4467 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on GLCD2 [c] : 1.0 glyclt + 1.0 mqn8 ==> 1.0 glx + 1.0 mql8 on b2979 AND b4468 AND b4467 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on GLCD3 [c] : 1.0 2dmmq8 + 1.0 glyclt ==> 1.0 2dmmql8 + 1.0 glx on b2979 AND b4468 AND b4467 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on PANB [c] : 1.0 3mob + 1.0 h2o + 1.0 mlthf ==> 1.0 2dhp + 1.0 thf on b0134 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on PANE [c] : 1.0 2dhp + 1.0 h + 1.0 nadph ==> 1.0 nadp + 1.0 pant-R on b0425 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on ILVC [c] : 1.0 2dhp + 1.0 h + 1.0 nadph ==> 1.0 nadp + 1.0 pant-R b3774 b3774 Cofactor and Prosthetic Group Biosynthesis b3774 "The Rest section in the Excel sheet MWC March 29, 2003" b3774 PAND [c] : 1.0 asp-L + 1.0 h ==> 1.0 ala-B + 1.0 co2 on b0131 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on PANC [c] : 1.0 ala-B + 1.0 atp + 1.0 pant-R ==> 1.0 amp + 1.0 h + 1.0 pnto-R + 1.0 ppi b0133 b0133 Cofactor and Prosthetic Group Biosynthesis b0133 b0133 COAA [c] : 1.0 atp + 1.0 pnto-R ==> 1.0 4ppan + 1.0 adp + 1.0 h on b3974 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on PCLIG [c] : 1.0 4ppan + 1.0 ctp + 1.0 cys-L ==> 1.0 4ppcys + 1.0 cmp + 1.0 h + 1.0 ppi on b3639 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on PCDCL [c] : 1.0 4ppcys + 1.0 h ==> 1.0 co2 + 1.0 pan4p on b3639 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on COAD [c] : 1.0 atp + 1.0 h + 1.0 pan4p ==> 1.0 dpcoa + 1.0 ppi on b3634 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on DPHCOAK [c] : 1.0 atp + 1.0 dpcoa ==> 1.0 adp + 1.0 coa + 1.0 h on b0103 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on ACPS [c] : 1.0 apoACP + 1.0 coa ==> 1.0 ACP + 1.0 h + 1.0 pap on b2563 AND b3475 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on NADB1 [c] : 1.0 asp-L + 1.0 q8 ==> 1.0 iasp + 1.0 q8h2 b2574 b2574 Cofactor and Prosthetic Group Biosynthesis b2574 Alon Changes b2574 NADA [c] : 1.0 dhap + 1.0 iasp ==> 1.0 h + 2.0 h2o + 1.0 pi + 1.0 quln on b0750 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on NADC [c] : 2.0 h + 1.0 prpp + 1.0 quln ==> 1.0 co2 + 1.0 nicrnt + 1.0 ppi on b0109 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on NADD1 [c] : 1.0 atp + 1.0 h + 1.0 nicrnt ==> 1.0 dnad + 1.0 ppi on b0109 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on NADD2 [c] : 1.0 atp + 1.0 h + 1.0 nmn ==> 1.0 nad + 1.0 ppi on b0109 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on NADE [c] : 1.0 atp + 1.0 dnad + 1.0 nh4 ==> 1.0 amp + 1.0 h + 1.0 nad + 1.0 ppi on b1740 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on NADF [c] : 1.0 atp + 1.0 nad ==> 1.0 adp + 1.0 h + 1.0 nadp on b2615 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on NADPHPS [c] : 1.0 h2o + 1.0 nadp ==> 1.0 nad + 1.0 pi on b3962 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on LIG [c] : 1.0 h2o + 1.0 nad ==> 1.0 amp + 2.0 h + 1.0 nmn on b3996 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on PNCC [c] : 1.0 h2o + 1.0 nmn ==> 1.0 nh4 + 1.0 nicrnt on Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on NMNGLH [c] : 1.0 h2o + 1.0 nmn ==> 1.0 h + 1.0 ncam + 1.0 r5p on Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on PNCA [c] : 1.0 h2o + 1.0 ncam ==> 1.0 nac + 1.0 nh4 on b1768 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on PNCB [c] : 1.0 atp + 1.0 h2o + 1.0 nac + 1.0 prpp ==> 1.0 adp + 1.0 nicrnt + 1.0 pi + 1.0 ppi b0931 b0931 Cofactor and Prosthetic Group Biosynthesis b0931 Alon Changes b0931 PNUE 1.0 H2O[e] + 1.0 NAD[e] ==> 1.0 AMP[e] + 2.0 H[e] + 1.0 NMN[e] on Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on PNUC 1.0 NMN[e] ==> 1.0 nmn[c] on b0751 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on NMNUP2 1.0 h2o[c] + 1.0 NMN[e] ==> 1.0 h[c] + 1.0 ncam[c] + 1.0 r5p[c] on Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on NACUP 1.0 NAC[e] ==> 1.0 nac[c] on Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on GLTX [c] : 1.0 atp + 1.0 glu-L + 1.0 trnaglu ==> 1.0 amp + 1.0 glutrna + 1.0 ppi on b2400 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on HEMA [c] : 1.0 glutrna + 1.0 h + 1.0 nadph ==> 1.0 glu1sa + 1.0 nadp + 1.0 trnaglu b1210 b1210 Cofactor and Prosthetic Group Biosynthesis b1210 b1210 HEML [c] : 1.0 glu1sa ==> 1.0 5aop on b0154 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on HEMB [c] : 2.0 5aop ==> 1.0 h + 2.0 h2o + 1.0 ppbng on b0369 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on HEMC [c] : 1.0 h2o + 4.0 ppbng ==> 1.0 hmbil + 4.0 nh4 b3805 b3805 Cofactor and Prosthetic Group Biosynthesis b3805 NEW ONES in Category 6 b3805 HEMD [c] : 1.0 hmbil ==> 1.0 h2o + 1.0 uppg3 on b3804 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on HEMX [c] : 2.0 amet + 1.0 uppg3 ==> 2.0 ahcys + 1.0 h + 1.0 shcl on b3803 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on CYSG1 [c] : 2.0 amet + 1.0 uppg3 ==> 2.0 ahcys + 1.0 h + 1.0 shcl b3368 b3368 Cofactor and Prosthetic Group Biosynthesis b3368 Alon Changes b3368 CYSG2 [c] : 1.0 nad + 1.0 shcl ==> 1.0 h + 1.0 nadh + 1.0 srch b3368 b3368 Cofactor and Prosthetic Group Biosynthesis b3368 Alon Changes b3368 CYSG3 [c] : 1.0 fe2 + 1.0 srch ==> 3.0 h + 1.0 sheme b3368 b3368 Cofactor and Prosthetic Group Biosynthesis b3368 Alon Changes b3368 HEME [c] : 4.0 h + 1.0 uppg3 ==> 4.0 co2 + 1.0 cpppg3 on b3997 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on HEMF [c] : 1.0 cpppg3 + 2.0 h + 1.0 o2 ==> 2.0 co2 + 2.0 h2o + 1.0 pppg9 on b2436 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on HEMG [c] : 1.5 o2 + 1.0 pppg9 ==> 3.0 h2o + 1.0 ppp9 on b3850 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on HEHH [c] : 1.0 fe2 + 1.0 ppp9 ==> 2.0 h + 1.0 pheme on Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on CYOE [c] : 1.0 frdp + 1.0 h2o + 1.0 pheme ==> 1.0 hemeO + 1.0 ppi b0428 b0428 Cofactor and Prosthetic Group Biosynthesis b0428 Alon Changes b0428 BIOFR [c] : 1.0 ala-L + 1.0 h + 1.0 pmcoa <==> 1.0 8aonn + 1.0 co2 + 1.0 coa b0776 b0776 Cofactor and Prosthetic Group Biosynthesis b0776 Alon Changes b0776 BIOAR [c] : 1.0 8aonn + 1.0 amet <==> 1.0 amob + 1.0 dann b0774 b0774 Cofactor and Prosthetic Group Biosynthesis b0774 Alon Changes b0774 BIODR [c] : 1.0 atp + 1.0 co2 + 1.0 dann <==> 1.0 adp + 1.0 dtbt + 3.0 h + 1.0 pi b0775 b0775 Cofactor and Prosthetic Group Biosynthesis b0775 Alon Changes b0775 BIOBR [c] : 1.0 cys-L + 1.0 dtbt <==> 1.0 ala-L + 1.0 btn + 2.0 h b0778 b0778 Cofactor and Prosthetic Group Biosynthesis b0778 Alon Changes b0778 GSHA [c] : 1.0 atp + 1.0 cys-L + 1.0 glu-L ==> 1.0 adp + 1.0 glucys + 1.0 h + 1.0 pi on b2688 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on GSHB [c] : 1.0 atp + 1.0 glucys + 1.0 gly ==> 1.0 adp + 1.0 gthrd + 1.0 h + 1.0 pi on b2947 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on GOR_R [c] : 1.0 gthox + 1.0 h + 1.0 nadph <==> 2.0 gthrd + 1.0 nadp b3500 b3500 Cofactor and Prosthetic Group Biosynthesis b3500 "The Rest section in the Excel sheet MWC March 29, 2003" b3500 THIC [c] : 1.0 air + 1.0 h2o ==> 1.0 4ampm + 2.0 for + 4.0 h b3994 b3994 Cofactor and Prosthetic Group Biosynthesis b3994 NEW ONES in Category 6 b3994 THID2 [c] : 1.0 4ahmmp + 1.0 atp ==> 1.0 4ampm + 1.0 adp + 1.0 h on b2103 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on PDXK [c] : 1.0 4ahmmp + 1.0 atp ==> 1.0 4ampm + 1.0 adp + 1.0 h on b2418 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on THID1 [c] : 1.0 4ampm + 1.0 atp ==> 1.0 2mahmp + 1.0 adp on b2103 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on THIF [c] : 1.0 atp + 1.0 cys-L + 1.0 dxyl5p + 1.0 tyr-L ==> 1.0 4hba + 1.0 4mpetz + 1.0 ala-L + 1.0 amp + 1.0 co2 + 1.0 h + 1.0 h2o + 1.0 ppi b0423 AND b2530 AND b3990 AND b3991 AND b3992 AND b4407 b0423 AND b2530 AND b3990 AND b3991 AND b3992 AND b4407 Cofactor and Prosthetic Group Biosynthesis b0423 AND b2530 AND b3990 AND b3991 AND b3992 AND b4407 NEW ONES in Category 6 b0423 AND b2530 AND b3990 AND b3991 AND b3992 AND b4407 THIM [c] : 1.0 4mhetz + 1.0 atp ==> 1.0 4mpetz + 1.0 adp + 1.0 h on b2104 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on THIB [c] : 1.0 2mahmp + 1.0 4mpetz + 1.0 h ==> 1.0 ppi + 1.0 thmmp b3993 b3993 Cofactor and Prosthetic Group Biosynthesis b3993 NEW ONES in Category 6 b3993 THIKR [c] : 1.0 atp + 1.0 thm <==> 1.0 adp + 1.0 h + 1.0 thmmp on b1106 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on THILR [c] : 1.0 atp + 1.0 thmmp <==> 1.0 adp + 1.0 thmpp on b0417 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on EPDR [c] : 1.0 e4p + 1.0 h2o + 1.0 nad <==> 1.0 4per + 2.0 h + 1.0 nadh b2927 b2927 Cofactor and Prosthetic Group Biosynthesis b2927 Alon Changes b2927 PDXBR [c] : 1.0 4per + 1.0 nad <==> 1.0 h + 1.0 nadh + 1.0 ohpb on b2320 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on SERC2R [c] : 1.0 glu-L + 1.0 ohpb <==> 1.0 akg + 1.0 phthr b0907 b0907 Cofactor and Prosthetic Group Biosynthesis b0907 "The Rest section in the Excel sheet MWC March 29, 2003" b0907 PDXA [c] : 1.0 dxyl5p + 1.0 nad + 1.0 phthr ==> 1.0 co2 + 1.0 h + 2.0 h2o + 1.0 nadh + 1.0 pdx5p + 1.0 pi b2564 AND b0052 b2564 AND b0052 Cofactor and Prosthetic Group Biosynthesis b2564 AND b0052 Alon Changes b2564 AND b0052 PDXH1R [c] : 1.0 o2 + 1.0 pdx5p <==> 1.0 h2o2 + 1.0 pydx5p on b1638 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on THRC2 [c] : 1.0 h2o + 1.0 phthr ==> 1.0 4hthr + 1.0 pi b0004 b0004 Cofactor and Prosthetic Group Biosynthesis b0004 "The Rest section in the Excel sheet MWC March 29, 2003" b0004 PDXK1 [c] : 1.0 atp + 1.0 pydxn ==> 1.0 adp + 1.0 h + 1.0 pdx5p on b2418 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on UNKRXN4 [c] : 1.0 h2o + 1.0 pdx5p ==> 1.0 pi + 1.0 pydxn on Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on UNKRXN5 [c] : 1.0 h2o + 1.0 pydx5p ==> 1.0 pi + 1.0 pydx on Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on PDXK2 [c] : 1.0 atp + 1.0 pydx ==> 1.0 adp + 1.0 h + 1.0 pydx5p on b2418 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on PDXK3 [c] : 1.0 atp + 1.0 pydam ==> 1.0 adp + 1.0 h + 1.0 pyam5p on b2418 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on UNKRXN6 [c] : 1.0 h2o + 1.0 pyam5p ==> 1.0 pi + 1.0 pydam on Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on PDXH2 [c] : 1.0 h2o + 1.0 o2 + 1.0 pyam5p ==> 1.0 h2o2 + 1.0 nh4 + 1.0 pydx5p on b1638 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on GLYA1 [c] : 1.0 ala-D + 1.0 pydx5p ==> 1.0 pyam5p + 1.0 pyr b2551 b2551 Cofactor and Prosthetic Group Biosynthesis b2551 Alon Changes b2551 GLYA2 [c] : 1.0 ala-L + 1.0 pydx5p ==> 1.0 pyam5p + 1.0 pyr b2551 b2551 Cofactor and Prosthetic Group Biosynthesis b2551 Alon Changes b2551 GLMS [c] : 1.0 f6p + 1.0 gln-L ==> 1.0 gam6p + 1.0 glu-L on b3729 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on GLMMR [c] : 1.0 gam1p <==> 1.0 gam6p on b3176 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on GLMU1 [c] : 1.0 accoa + 1.0 gam1p ==> 1.0 acgam1p + 1.0 coa + 1.0 h on b3730 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on GLMU2 [c] : 1.0 acgam1p + 1.0 h + 1.0 utp ==> 1.0 ppi + 1.0 uacgam on b3730 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on LPXAR [c] : 1.0 3hmrsACP + 1.0 uacgam <==> 1.0 ACP + 1.0 u3aga on b0181 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on LPXC [c] : 1.0 h2o + 1.0 u3aga ==> 1.0 ac + 1.0 u3hga on b0096 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on LPXD [c] : 1.0 3hmrsACP + 1.0 u3hga ==> 1.0 ACP + 1.0 h + 1.0 u23ga on b0179 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on USHA [c] : 1.0 h2o + 1.0 u23ga ==> 2.0 h + 1.0 lipidX + 1.0 ump on b0480 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on LPXB [c] : 1.0 lipidX + 1.0 u23ga ==> 1.0 h + 1.0 lipidAds + 1.0 udp on b0182 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on LPXK [c] : 1.0 atp + 1.0 lipidAds ==> 1.0 adp + 1.0 h + 1.0 lipidA on b0915 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on KDTA1 [c] : 1.0 ckdo + 1.0 lipidA ==> 1.0 cmp + 1.0 h + 1.0 kdolipid4 on b3633 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on KDTA2 [c] : 1.0 ckdo + 1.0 kdolipid4 ==> 1.0 cmp + 1.0 h + 1.0 kdo2lipid4 on b3633 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on LPXL1 [c] : 1.0 ddcaACP + 1.0 kdo2lipid4 ==> 1.0 ACP + 1.0 kdo2lipid4L on b1054 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on LPXL2 [c] : 1.0 kdo2lipid4L + 1.0 myrsACP ==> 1.0 ACP + 1.0 lipa on b1054 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on KDSA [c] : 1.0 ara5p + 1.0 h2o + 1.0 pep ==> 1.0 kdo8p + 1.0 pi on b1215 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on KDOPH [c] : 1.0 h2o + 1.0 kdo8p ==> 1.0 kdo + 1.0 pi on b3198 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on KDSB [c] : 1.0 ctp + 1.0 kdo ==> 1.0 ckdo + 1.0 ppi on b0918 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on GMHA [c] : 1.0 s7p ==> 1.0 gmhep7p on b0222 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on RFAE1 [c] : 1.0 atp + 1.0 gmhep7p ==> 1.0 adp + 1.0 gmhep17bp + 1.0 h on b3052 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on GMHB [c] : 1.0 gmhep17bp + 1.0 h2o ==> 1.0 gmhep1p + 1.0 pi on b0200 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on RFAE2 [c] : 1.0 atp + 1.0 gmhep1p + 1.0 h ==> 1.0 adphep-DD + 1.0 ppi on b3052 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on RFAD [c] : 1.0 adphep-DD ==> 1.0 adphep-LD on b3619 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on GALU2 [c] : 1.0 g1p + 1.0 h + 1.0 utp ==> 1.0 ppi + 1.0 udpg on b1236 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on GALF [c] : 1.0 g1p + 1.0 h + 1.0 utp ==> 1.0 ppi + 1.0 udpg on b2662 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on ETHAPHTR [c] : 1.0 cmp + 1.0 h + 0.02 pe_EC <==> 0.02 12dgr_EC + 1.0 cdpea on Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on PAPHTSE [c] : 1.0 h2o + 0.02 pa_EC ==> 0.02 12dgr_EC + 1.0 pi on Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on DAGKIN [c] : 0.02 12dgr_EC + 1.0 atp ==> 1.0 adp + 1.0 h + 0.02 pa_EC on b4042 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on RFAL [c] : 3.0 adphep-LD + 2.0 cdpea + 3.0 ckdo + 1.0 lipa + 2.0 udpg ==> 3.0 adp + 2.0 cdp + 3.0 cmp + 10.0 h + 1.0 lps_EC + 2.0 udp on b3622 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on MURA [c] : 1.0 pep + 1.0 uacgam ==> 1.0 pi + 1.0 uaccg on b3189 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on MURB [c] : 1.0 h + 1.0 nadph + 1.0 uaccg ==> 1.0 nadp + 1.0 uamr on b3972 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on MURC [c] : 1.0 ala-L + 1.0 atp + 1.0 uamr ==> 1.0 adp + 1.0 h + 1.0 pi + 1.0 uama on b0091 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on MURD [c] : 1.0 atp + 1.0 glu-D + 1.0 uama ==> 1.0 adp + 1.0 h + 1.0 pi + 1.0 uamag on b0088 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on MURE [c] : 1.0 26dap-M + 1.0 atp + 1.0 uamag ==> 1.0 adp + 1.0 h + 1.0 pi + 1.0 ugmd on b0085 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on MURF [c] : 1.0 alaala + 1.0 atp + 1.0 ugmd ==> 1.0 adp + 1.0 h + 1.0 pi + 1.0 ugmda on b0086 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on MURIR [c] : 1.0 glu-D <==> 1.0 glu-L on b3967 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on DDLAR [c] : 2.0 ala-D + 1.0 atp <==> 1.0 adp + 1.0 alaala + 1.0 h + 1.0 pi on b0381 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on DDLBR [c] : 2.0 ala-D + 1.0 atp <==> 1.0 adp + 1.0 alaala + 1.0 h + 1.0 pi on b0092 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on MRAY [c] : 1.0 udcpp + 1.0 ugmda ==> 1.0 uagmda + 1.0 ump on b0087 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on MURG [c] : 1.0 uacgam + 1.0 uagmda ==> 1.0 h + 1.0 uaagmda + 1.0 udp on b0090 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on UNKRXN7 [c] : 1.0 uaagmda ==> 1.0 h + 1.0 peptido_EC + 1.0 udcpdp on Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on UNKRXN8 [c] : 1.0 h2o + 1.0 udcpdp ==> 1.0 h + 1.0 pi + 1.0 udcpp on Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on FBABR [c] : 1.0 fdp <==> 1.0 dhap + 1.0 g3p b2097 b2097 Alternate Carbon Metabolism b2097 Jennie's rules for v2.1 section (JR) b2097 XYLB2 [c] : 1.0 atp + 1.0 dxyl ==> 1.0 adp + 1.0 dxyl5p + 1.0 h b3564 b3564 Alternate Carbon Metabolism b3564 Alon Changes b3564 KATG [c] : 2.0 h2o2 ==> 2.0 h2o + 1.0 o2 b3942 b3942 Unassigned b3942 Alon Changes b3942 KATE [c] : 2.0 h2o2 ==> 2.0 h2o + 1.0 o2 b1732 b1732 Unassigned b1732 PAAK (NOT PaaX) b1732 STHA [c] : 1.0 nad + 1.0 nadph ==> 1.0 nadh + 1.0 nadp b3962 b3962 Metabolism Oxidative phosphorylation b3962 NEW ONES in Category 6 b3962 OTSA [c] : 1.0 g6p + 1.0 udpg ==> 1.0 h + 1.0 tre6p + 1.0 udp b1896 b1896 Alternate Carbon Metabolism b1896 "The Rest section in the Excel sheet MWC March 29, 2003" b1896 YGFP [c] : 1.0 gua + 1.0 h + 1.0 h2o ==> 1.0 nh4 + 1.0 xan on b2883 Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on CITD [c] : 1.0 cit ==> 1.0 ac + 1.0 oaa b0617 AND b0616 AND b0615 b0617 AND b0616 AND b0615 Metabolism TCA cycle b0617 AND b0616 AND b0615 "The Rest section in the Excel sheet MWC March 29, 2003" b0617 AND b0616 AND b0615 MGSA [c] : 1.0 dhap ==> 1.0 mthgxl + 1.0 pi b0963 b0963 Methylglyoxal Metabolism b0963 b0963 TDCG [c] : 1.0 ser-L ==> 1.0 nh4 + 1.0 pyr b3112 AND b3111 b3112 AND b3111 Amino Acid Serine and Glycine b3112 AND b3111 Jennie's rules for v2.1 section (JR) b3112 AND b3111 TREF [c] : 1.0 h2o + 1.0 tre ==> 2.0 glc-D b3519 b3519 Alternate Carbon Metabolism b3519 "The Rest section in the Excel sheet MWC March 29, 2003" b3519 OTSB [c] : 1.0 h2o + 1.0 tre6p ==> 1.0 pi + 1.0 tre b1897 b1897 Alternate Carbon Metabolism b1897 "The Rest section in the Excel sheet MWC March 29, 2003" b1897 GMD [c] : 1.0 gdpmann ==> 1.0 gdpddman + 1.0 h2o on b2053 Alternate Carbon Metabolism on " *EWB (no regulation given previously, assumed on)" on FCL1 [c] : 1.0 gdpddman ==> 1.0 gdpofuc on Alternate Carbon Metabolism on " *EWB (no regulation given previously, assumed on)" on FCL2 [c] : 1.0 gdpofuc + 1.0 h + 1.0 nadph ==> 1.0 gdpfuc + 1.0 nadp on Alternate Carbon Metabolism on " *EWB (no regulation given previously, assumed on)" on YIBOR [c] : 1.0 2pg <==> 1.0 3pg b3612 b3612 Alternate Carbon Metabolism b3612 NEW ONES in Category 6 b3612 YGFG [c] : 1.0 h + 1.0 mmcoa-S ==> 1.0 co2 + 1.0 ppcoa on b2919 Alternate Carbon Metabolism on " *EWB (no regulation given previously, assumed on)" on YGFH [c] : 1.0 ppcoa + 1.0 succ ==> 1.0 ppa + 1.0 succoa on b2920 Alternate Carbon Metabolism on " *EWB (no regulation given previously, assumed on)" on SBM [c] : 1.0 succoa ==> 1.0 mmcoa-R on b2917 Alternate Carbon Metabolism on " *EWB (no regulation given previously, assumed on)" on UNKRXN9R [c] : 1.0 mmcoa-R <==> 1.0 mmcoa-S on Alternate Carbon Metabolism on " *EWB (no regulation given previously, assumed on)" on TDCE1 [c] : 1.0 coa + 1.0 pyr ==> 1.0 accoa + 1.0 for b3114 b3114 Metabolism Pyruvate metabolism b3114 Catabolite Repression from Paigen and Park b3114 TDCE2 [c] : 1.0 2obut + 1.0 coa ==> 1.0 for + 1.0 ppcoa b3114 b3114 Alternate Carbon Metabolism b3114 Catabolite Repression from Paigen and Park b3114 TDCD1R [c] : 1.0 adp + 1.0 ppap <==> 1.0 atp + 1.0 ppa b3115 b3115 Alternate Carbon Metabolism b3115 Catabolite Repression from Paigen and Park b3115 TDCD2R [c] : 1.0 ac + 1.0 atp <==> 1.0 actp + 1.0 adp b3115 b3115 Metabolism Pyruvate metabolism b3115 Catabolite Repression from Paigen and Park b3115 PTA2 [c] : 1.0 pi + 1.0 ppcoa ==> 1.0 coa + 1.0 ppap b2297 b2297 Alternate Carbon Metabolism b2297 b2297 PFL2 [c] : 1.0 2obut + 1.0 coa ==> 1.0 for + 1.0 ppcoa b0902 AND b0903 b0902 AND b0903 Alternate Carbon Metabolism b0902 AND b0903 Alon Changes b0902 AND b0903 TAUD [c] : 1.0 akg + 1.0 o2 + 1.0 taur ==> 1.0 aacald + 1.0 co2 + 1.0 h + 1.0 so3 + 1.0 succ b0368 b0368 Alternate Carbon Metabolism b0368 Alon Changes b0368 MQO1 [c] : 1.0 mal-L + 1.0 q8 ==> 1.0 oaa + 1.0 q8h2 b2210 b2210 Metabolism TCA cycle b2210 Jennie's rules for v2.1 section (JR) b2210 MQO2 [c] : 1.0 mal-L + 1.0 mqn8 ==> 1.0 mql8 + 1.0 oaa b2210 b2210 Metabolism TCA cycle b2210 Jennie's rules for v2.1 section (JR) b2210 GCD 1.0 q8[c] + 1.0 GLC[e] + 1.0 H2O[e] ==> 1.0 q8h2[c] + 1.0 GLCN[e] + 1.0 H[e] b0124 b0124 ? b0124 Jennie's rules for v2.1 section (JR) b0124 SELD [c] : 1.0 atp + 1.0 h2o + 1.0 seln ==> 1.0 amp + 1.0 pi + 1.0 selnp on b1764 Unassigned on " *EWB (no regulation given previously, assumed on)" on PRPC [c] : 1.0 h2o + 1.0 oaa + 1.0 ppcoa ==> 1.0 2mcit + 1.0 coa + 1.0 h b0333 b0333 Alternate Carbon Metabolism b0333 Jennie's rules for v2.1 section (JR) b0333 HYIR [c] : 1.0 hpyr <==> 1.0 2h3oppan on b0508 Alternate Carbon Metabolism on " *EWB (no regulation given previously, assumed on)" on FEAB [c] : 1.0 h2o + 1.0 nad + 1.0 pacald ==> 2.0 h + 1.0 nadh + 1.0 pac b1385 b1385 Alternate Carbon Metabolism b1385 Jennie's rules for v2.1 section (JR) b1385 GLOA [c] : 1.0 gthrd + 1.0 mthgxl ==> 1.0 lgt-S on b1651 Methylglyoxal Metabolism on " *EWB (no regulation given previously, assumed on)" on GLOB [c] : 1.0 h2o + 1.0 lgt-S ==> 1.0 gthrd + 1.0 h + 1.0 lac-D on b0212 Methylglyoxal Metabolism on " *EWB (no regulation given previously, assumed on)" on GLPE [c] : 1.0 cyan + 1.0 tsul ==> 1.0 h + 1.0 so3 + 1.0 tcynt b3425 b3425 Unassigned b3425 Jennie's rules for v2.1 section (JR) b3425 GSP1 [c] : 1.0 atp + 1.0 gthrd + 1.0 spmd ==> 1.0 adp + 1.0 gtspmd + 1.0 h + 1.0 pi on b2988 Amino Acid "Arginine, Spermidine, etc." on " *EWB (no regulation given previously, assumed on)" on GSP2 [c] : 1.0 gtspmd + 1.0 h2o ==> 1.0 gthrd + 1.0 spmd on b2988 Amino Acid "Arginine, Spermidine, etc." on " *EWB (no regulation given previously, assumed on)" on COBT [c] : 1.0 dmbzid + 1.0 nicrnt ==> 1.0 5prdmbz + 1.0 h + 1.0 nac b1991 b1991 Cofactor and Prosthetic Group Biosynthesis b1991 Jennie's rules for v2.1 section (JR) b1991 COBS [c] : 1.0 agdpcbi + 1.0 rdmbzi ==> 1.0 adocbl + 1.0 gmp + 1.0 h b1992 b1992 Cofactor and Prosthetic Group Biosynthesis b1992 Jennie's rules for v2.1 section (JR) b1992 COBU1 [c] : 1.0 adocbi + 1.0 atp ==> 1.0 adocbip + 1.0 adp + 1.0 h b1993 b1993 Cofactor and Prosthetic Group Biosynthesis b1993 Jennie's rules for v2.1 section (JR) b1993 COBU2 [c] : 1.0 adocbip + 1.0 gtp + 1.0 h ==> 1.0 agdpcbi + 1.0 ppi b1993 b1993 Cofactor and Prosthetic Group Biosynthesis b1993 Jennie's rules for v2.1 section (JR) b1993 PHPB [c] : 1.0 5prdmbz + 1.0 h2o ==> 1.0 pi + 1.0 rdmbzi on b0638 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on BTUR1R [c] : 1.0 atp + 1.0 cbi + 1.0 h2o <==> 1.0 adocbi + 1.0 pi + 1.0 ppi on b1270 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on BTUR2R [c] : 1.0 atp + 1.0 cbl1 + 1.0 h2o <==> 1.0 adocbl + 1.0 pi + 1.0 ppi on b1270 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on CYNS [c] : 1.0 cynt + 3.0 h + 1.0 hco3 ==> 2.0 co2 + 1.0 nh4 b0340 b0340 Nitrogen b0340 Jennie's rules for v2.1 section (JR) b0340 CAIB1R [c] : 1.0 crn + 1.0 ctbtcoa <==> 1.0 crncoa + 1.0 ctbt b0038 b0038 Metabolism Oxidative Phosphorylation b0038 Jennie's rules for v2.1 section (JR) b0038 CAIB3R [c] : 1.0 bbtcoa + 1.0 crn <==> 1.0 crncoa + 1.0 gbbtn b0038 b0038 Metabolism Oxidative Phosphorylation b0038 Jennie's rules for v2.1 section (JR) b0038 CAIDR [c] : 1.0 crncoa <==> 1.0 ctbtcoa + 1.0 h2o b0036 b0036 Metabolism Oxidative Phosphorylation b0036 Jennie's rules for v2.1 section (JR) b0036 UXUA [c] : 1.0 mana ==> 1.0 2ddglcn + 1.0 h2o b4322 b4322 Alternate Carbon Metabolism b4322 Jennie's rules for v2.1 section (JR) b4322 UXAA [c] : 1.0 altrn ==> 1.0 2ddglcn + 1.0 h2o b3091 b3091 Alternate Carbon Metabolism b3091 Jennie's rules for v2.1 section (JR) b3091 UXUBR [c] : 1.0 mana + 1.0 nad <==> 1.0 fruur + 1.0 h + 1.0 nadh b4323 b4323 Alternate Carbon Metabolism b4323 Jennie's rules for v2.1 section (JR) b4323 UXABR [c] : 1.0 altrn + 1.0 nad <==> 1.0 h + 1.0 nadh + 1.0 tagur b1521 b1521 Alternate Carbon Metabolism b1521 Jennie's rules for v2.1 section (JR) b1521 UXAC1R [c] : 1.0 glcur <==> 1.0 fruur b3092 b3092 Alternate Carbon Metabolism b3092 Jennie's rules for v2.1 section (JR) b3092 UXAC2R [c] : 1.0 galur <==> 1.0 tagur b3092 b3092 Alternate Carbon Metabolism b3092 Jennie's rules for v2.1 section (JR) b3092 KDGK [c] : 1.0 2ddglcn + 1.0 atp ==> 1.0 2ddg6p + 1.0 adp + 1.0 h b3526 b3526 Alternate Carbon Metabolism b3526 Jennie's rules for v2.1 section (JR) b3526 UGD [c] : 1.0 h2o + 2.0 nad + 1.0 udpg ==> 3.0 h + 2.0 nadh + 1.0 udpglcur on b2028 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on GPH [c] : 1.0 2pglyc + 1.0 h2o ==> 1.0 glyclt + 1.0 pi on b3385 Alternate Carbon Metabolism on " *EWB (no regulation given previously, assumed on)" on GCL [c] : 2.0 glx + 1.0 h ==> 1.0 2h3oppan + 1.0 co2 b0507 b0507 Glyoxylate Metabolism b0507 Jennie's rules for v2.1 section (JR) b0507 GLXK [c] : 1.0 atp + 1.0 glyc-R ==> 1.0 3pg + 1.0 adp + 1.0 h b0514 b0514 Glyoxylate Metabolism b0514 Jennie's rules for v2.1 section (JR) b0514 GLXR1 [c] : 1.0 2h3oppan + 1.0 h + 1.0 nadh ==> 1.0 glyc-R + 1.0 nad b0509 b0509 Glyoxylate Metabolism b0509 Jennie's rules for v2.1 section (JR) b0509 TTDA [c] : 1.0 tartr-L ==> 1.0 h2o + 1.0 oaa b3062 AND b3061 b3062 AND b3061 Alternate Carbon Metabolism b3062 AND b3061 Jennie's rules for v2.1 section (JR) b3062 AND b3061 GUDD [c] : 1.0 glcr ==> 1.0 5dh4dglc + 1.0 h2o b2787 b2787 Alternate Carbon Metabolism b2787 Jennie's rules for v2.1 section (JR) b2787 GARL [c] : 1.0 5dh4dglc ==> 1.0 2h3oppan + 1.0 pyr b3126 b3126 Alternate Carbon Metabolism b3126 Jennie's rules for v2.1 section (JR) b3126 GARD [c] : 1.0 galct-D ==> 1.0 5dh4dglc + 1.0 h2o b3128 b3128 Alternate Carbon Metabolism b3128 Jennie's rules for v2.1 section (JR) b3128 GARR1 [c] : 1.0 2h3oppan + 1.0 h + 1.0 nadh ==> 1.0 glyc-R + 1.0 nad b3125 b3125 Glyoxylate Metabolism b3125 Jennie's rules for v2.1 section (JR) b3125 GARK [c] : 1.0 atp + 1.0 glyc-R ==> 1.0 3pg + 1.0 adp + 1.0 h b3124 b3124 Glyoxylate Metabolism b3124 Jennie's rules for v2.1 section (JR) b3124 HCAB1 [c] : 1.0 cechddd + 1.0 nad ==> 1.0 dhpppn + 1.0 h + 1.0 nadh b2541 b2541 Alternate Carbon Metabolism b2541 Jennie's rules for v2.1 section (JR) b2541 HCAB2 [c] : 1.0 cenchddd + 1.0 nad ==> 1.0 dhcinnm + 1.0 h + 1.0 nadh b2541 b2541 Alternate Carbon Metabolism b2541 Jennie's rules for v2.1 section (JR) b2541 HCAD1 [c] : 1.0 h + 1.0 nadh + 1.0 o2 + 1.0 pppn ==> 1.0 cechddd + 1.0 nad b2542 AND b2538 AND b2540 AND b2539 b2542 AND b2538 AND b2540 AND b2539 Alternate Carbon Metabolism b2542 AND b2538 AND b2540 AND b2539 Jennie's rules for v2.1 section (JR) b2542 AND b2538 AND b2540 AND b2539 HCAD2 [c] : 1.0 cinnm + 1.0 h + 1.0 nadh + 1.0 o2 ==> 1.0 cenchddd + 1.0 nad b2542 AND b2538 AND b2540 AND b2539 b2542 AND b2538 AND b2540 AND b2539 Alternate Carbon Metabolism b2542 AND b2538 AND b2540 AND b2539 Jennie's rules for v2.1 section (JR) b2542 AND b2538 AND b2540 AND b2539 MHPA1 [c] : 1.0 3hpppn + 1.0 h + 1.0 nadh + 1.0 o2 ==> 1.0 dhpppn + 1.0 h2o + 1.0 nad b0347 b0347 Alternate Carbon Metabolism b0347 Jennie's rules for v2.1 section (JR) b0347 MHPA2 [c] : 1.0 3hcinnm + 1.0 h + 1.0 nadh + 1.0 o2 ==> 1.0 dhcinnm + 1.0 h2o + 1.0 nad b0347 b0347 Alternate Carbon Metabolism b0347 Jennie's rules for v2.1 section (JR) b0347 MHPB1 [c] : 1.0 dhpppn + 1.0 o2 ==> 1.0 hkndd b0348 b0348 Alternate Carbon Metabolism b0348 Jennie's rules for v2.1 section (JR) b0348 MHPB2 [c] : 1.0 dhcinnm + 1.0 o2 ==> 1.0 hkntd b0348 b0348 Alternate Carbon Metabolism b0348 Jennie's rules for v2.1 section (JR) b0348 MHPC1 [c] : 1.0 h2o + 1.0 hkndd ==> 2.0 h + 1.0 op4en + 1.0 succ b0349 b0349 Alternate Carbon Metabolism b0349 Jennie's rules for v2.1 section (JR) b0349 MHPC2 [c] : 1.0 h2o + 1.0 hkntd ==> 1.0 fum + 2.0 h + 1.0 op4en b0349 b0349 Alternate Carbon Metabolism b0349 Jennie's rules for v2.1 section (JR) b0349 MHPD [c] : 1.0 h2o + 1.0 op4en ==> 1.0 4h2opntn b0350 b0350 Alternate Carbon Metabolism b0350 Jennie's rules for v2.1 section (JR) b0350 MHPE [c] : 1.0 4h2opntn ==> 1.0 acald + 1.0 pyr b0352 b0352 Alternate Carbon Metabolism b0352 Jennie's rules for v2.1 section (JR) b0352 MHPF [c] : 1.0 acald + 1.0 coa + 1.0 nad ==> 1.0 accoa + 1.0 h + 1.0 nadh b0351 b0351 Alternate Carbon Metabolism b0351 Jennie's rules for v2.1 section (JR) b0351 TORA1 1.0 mql8[c] + 1.0 H[e] + 1.0 TMAO[e] ==> 1.0 mqn8[c] + 1.0 H2O[e] + 1.0 TMA[e] b0996 AND b0997 b0996 AND b0997 Metabolism Oxidative Phosphorylation b0996 AND b0997 Alon Changes b0996 AND b0997 TORA2 1.0 2dmmql8[c] + 1.0 H[e] + 1.0 TMAO[e] ==> 1.0 2dmmq8[c] + 1.0 H2O[e] + 1.0 TMA[e] b0996 AND b0997 b0996 AND b0997 Metabolism Oxidative Phosphorylation b0996 AND b0997 Alon Changes b0996 AND b0997 TORZ1 1.0 mql8[c] + 1.0 H[e] + 1.0 TMAO[e] ==> 1.0 mqn8[c] + 1.0 H2O[e] + 1.0 TMA[e] on b1872 AND b1873 Metabolism Oxidative Phosphorylation on " *EWB (no regulation given previously, assumed on)" on TORZ2 1.0 2dmmql8[c] + 1.0 H[e] + 1.0 TMAO[e] ==> 1.0 2dmmq8[c] + 1.0 H2O[e] + 1.0 TMA[e] on b1872 AND b1873 Metabolism Oxidative Phosphorylation on " *EWB (no regulation given previously, assumed on)" on TORZ3 1.0 2dmmql8[c] + 1.0 DMSO[e] ==> 1.0 2dmmq8[c] + 1.0 DMS[e] + 1.0 H2O[e] on b1872 AND b1873 Metabolism Oxidative Phosphorylation on " *EWB (no regulation given previously, assumed on)" on TORZ4 1.0 mql8[c] + 1.0 DMSO[e] ==> 1.0 mqn8[c] + 1.0 DMS[e] + 1.0 H2O[e] on b1872 AND b1873 Metabolism Oxidative Phosphorylation on " *EWB (no regulation given previously, assumed on)" on DMSA1 [c] : 1.0 h + 1.0 mql8 + 1.0 tmao ==> 1.0 h2o + 1.0 mqn8 + 1.0 tma b0895 AND b0896 AND b0894 b0895 AND b0896 AND b0894 Metabolism Oxidative Phosphorylation b0895 AND b0896 AND b0894 Jennie's rules for v2.1 section (JR) b0895 AND b0896 AND b0894 DMSA2 [c] : 1.0 2dmmql8 + 1.0 h + 1.0 tmao ==> 1.0 2dmmq8 + 1.0 h2o + 1.0 tma b0895 AND b0896 AND b0894 b0895 AND b0896 AND b0894 Metabolism Oxidative Phosphorylation b0895 AND b0896 AND b0894 Jennie's rules for v2.1 section (JR) b0895 AND b0896 AND b0894 DMSA3 [c] : 1.0 2dmmql8 + 1.0 dmso ==> 1.0 2dmmq8 + 1.0 dms + 1.0 h2o b0895 AND b0896 AND b0894 b0895 AND b0896 AND b0894 Metabolism Oxidative Phosphorylation b0895 AND b0896 AND b0894 Jennie's rules for v2.1 section (JR) b0895 AND b0896 AND b0894 DMSA4 [c] : 1.0 dmso + 1.0 mql8 ==> 1.0 dms + 1.0 h2o + 1.0 mqn8 b0895 AND b0896 AND b0894 b0895 AND b0896 AND b0894 Metabolism Oxidative Phosphorylation b0895 AND b0896 AND b0894 Jennie's rules for v2.1 section (JR) b0895 AND b0896 AND b0894 NARG1 2.0 h[c] + 1.0 no3[c] + 1.0 q8h2[c] ==> 1.0 h2o[c] + 1.0 no2[c] + 1.0 q8[c] + 2.0 H[e] b1224 AND b1227 AND b1226 AND b1225 b1224 AND b1227 AND b1226 AND b1225 Metabolism Oxidative Phosphorylation b1224 AND b1227 AND b1226 AND b1225 Jennie's rules for v2.1 section (JR) b1224 AND b1227 AND b1226 AND b1225 NARG2 2.0 h[c] + 1.0 mql8[c] + 1.0 no3[c] ==> 1.0 h2o[c] + 1.0 mqn8[c] + 1.0 no2[c] + 2.0 H[e] b1224 AND b1227 AND b1226 AND b1225 b1224 AND b1227 AND b1226 AND b1225 Metabolism Oxidative Phosphorylation b1224 AND b1227 AND b1226 AND b1225 Jennie's rules for v2.1 section (JR) b1224 AND b1227 AND b1226 AND b1225 NIRB [c] : 5.0 h + 3.0 nadh + 1.0 no2 ==> 2.0 h2o + 3.0 nad + 1.0 nh4 b3366 AND b3365 b3366 AND b3365 Metabolism Oxidative Phosphorylation b3366 AND b3365 Jennie's rules for v2.1 section (JR) b3366 AND b3365 IDND1R [c] : 1.0 5dglcn + 1.0 h + 1.0 nadh <==> 1.0 idon-L + 1.0 nad b4267 b4267 Alternate Carbon Metabolism b4267 Jennie's rules for v2.1 section (JR) b4267 IDND2 [c] : 1.0 5dglcn + 1.0 h + 1.0 nadph ==> 1.0 idon-L + 1.0 nadp b4267 b4267 Alternate Carbon Metabolism b4267 Jennie's rules for v2.1 section (JR) b4267 YAFB [c] : 1.0 25dkglcn + 1.0 h + 1.0 nadph ==> 1.0 2dhguln + 1.0 nadp b0207 b0207 Alternate Carbon Metabolism b0207 b0207 YGHE [c] : 1.0 25dkglcn + 1.0 h + 1.0 nadph ==> 1.0 2dhguln + 1.0 nadp on b2969 Alternate Carbon Metabolism on " *EWB (no regulation given previously, assumed on)" on IDNOR [c] : 1.0 5dglcn + 1.0 h + 1.0 nadph <==> 1.0 glcn + 1.0 nadp b4266 b4266 Alternate Carbon Metabolism b4266 Jennie's rules for v2.1 section (JR) b4266 YIAE1 [c] : 1.0 25dkglcn + 1.0 h + 1.0 nadph ==> 1.0 5dglcn + 1.0 nadp on b3553 Alternate Carbon Metabolism on " *EWB (no regulation given previously, assumed on)" on YIAE2 [c] : 1.0 2dhglcn + 1.0 h + 1.0 nadph ==> 1.0 glcn + 1.0 nadp on b3553 Alternate Carbon Metabolism on " *EWB (no regulation given previously, assumed on)" on YIAE3 [c] : 1.0 2dhguln + 1.0 h + 1.0 nadph ==> 1.0 idon-L + 1.0 nadp on b3553 Alternate Carbon Metabolism on " *EWB (no regulation given previously, assumed on)" on YIAE4 [c] : 1.0 glx + 1.0 h + 1.0 nadph ==> 1.0 glyclt + 1.0 nadp on b3553 Glyoxylate Metabolism on " *EWB (no regulation given previously, assumed on)" on YIAE5 [c] : 1.0 h + 1.0 hpyr + 1.0 nadph ==> 1.0 glyc-R + 1.0 nadp on b3553 Alternate Carbon Metabolism on " *EWB (no regulation given previously, assumed on)" on YIAE6 [c] : 1.0 25dkglcn + 1.0 h + 1.0 nadh ==> 1.0 5dglcn + 1.0 nad on b3553 Alternate Carbon Metabolism on " *EWB (no regulation given previously, assumed on)" on YIAE7 [c] : 1.0 2dhglcn + 1.0 h + 1.0 nadh ==> 1.0 glcn + 1.0 nad on b3553 Alternate Carbon Metabolism on " *EWB (no regulation given previously, assumed on)" on YIAE8 [c] : 1.0 2dhguln + 1.0 h + 1.0 nadh ==> 1.0 idon-L + 1.0 nad on b3553 Alternate Carbon Metabolism on " *EWB (no regulation given previously, assumed on)" on YIAE9 [c] : 1.0 glx + 1.0 h + 1.0 nadh ==> 1.0 glyclt + 1.0 nad on b3553 Glyoxylate Metabolism on " *EWB (no regulation given previously, assumed on)" on YIAE10 [c] : 1.0 h + 1.0 hpyr + 1.0 nadh ==> 1.0 glyc-R + 1.0 nad on b3553 Alternate Carbon Metabolism on " *EWB (no regulation given previously, assumed on)" on YCDW1 [c] : 1.0 glx + 1.0 h + 1.0 nadph ==> 1.0 glyclt + 1.0 nadp b1033 b1033 Glyoxylate Metabolism b1033 NEW ONES in Category 6 b1033 YCDW2 [c] : 1.0 h + 1.0 hpyr + 1.0 nadph ==> 1.0 glyc-R + 1.0 nadp b1033 b1033 Alternate Carbon Metabolism b1033 NEW ONES in Category 6 b1033 YCDW3 [c] : 1.0 glx + 1.0 h + 1.0 nadh ==> 1.0 glyclt + 1.0 nad b1033 b1033 Glyoxylate Metabolism b1033 NEW ONES in Category 6 b1033 YCDW4 [c] : 1.0 h + 1.0 hpyr + 1.0 nadh ==> 1.0 glyc-R + 1.0 nad b1033 b1033 Alternate Carbon Metabolism b1033 NEW ONES in Category 6 b1033 GLDA [c] : 1.0 glyc + 1.0 nad ==> 1.0 dha + 1.0 h + 1.0 nadh on b3945 Alternate Carbon Metabolism on " *EWB (no regulation given previously, assumed on)" on ALLA [c] : 2.0 h + 1.0 h2o + 1.0 urdglyc ==> 1.0 co2 + 1.0 glx + 2.0 nh4 b0505 b0505 Nitrogen b0505 Jennie's rules for v2.1 section (JR) b0505 ALLC [c] : 1.0 alltt + 1.0 h2o ==> 1.0 urdglyc + 1.0 urea b0516 b0516 Nitrogen b0516 Jennie's rules for v2.1 section (JR) b0516 ALLB [c] : 1.0 alltn + 1.0 h2o ==> 1.0 alltt + 1.0 h b0512 b0512 Nitrogen b0512 Jennie's rules for v2.1 section (JR) b0512 GLF [c] : 1.0 udpgal ==> 1.0 udpgalfur on b2036 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on RFBA [c] : 1.0 dttp + 1.0 g1p + 1.0 h ==> 1.0 dtdpglu + 1.0 ppi on b2039 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on RFBB [c] : 1.0 dtdpglu ==> 1.0 dtdp4d6dg + 1.0 h2o on b2041 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on RFBC [c] : 1.0 dtdp4d6dg ==> 1.0 dtdp4d6dm on b2038 AND b2040 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on RFBD [c] : 1.0 dtdp4d6dm + 1.0 h + 1.0 nadph ==> 1.0 dtdprmn + 1.0 nadp b2040 b2040 Cell envelope biosynthesis b2040 NEW ONES in Category 6 b2040 WECA [c] : 1.0 uacgam + 1.0 udcpp ==> 1.0 ump + 1.0 unaga on b3784 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on WECE [c] : 1.0 dtdp4d6dg + 1.0 glu-L ==> 1.0 akg + 1.0 dtdp4addg on b3791 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on WECF [c] : 1.0 dtdp4aaddg + 1.0 unagamu ==> 1.0 dtdp + 1.0 h + 1.0 unagamuf on b4481 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on WECC [c] : 1.0 h2o + 2.0 nad + 1.0 uacmam ==> 3.0 h + 2.0 nadh + 1.0 uacmamu on b3787 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on WECD [c] : 1.0 accoa + 1.0 dtdp4addg ==> 1.0 coa + 1.0 dtdp4aaddg + 1.0 h on b3790 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on RFFH [c] : 1.0 dttp + 1.0 g1p + 1.0 h ==> 1.0 dtdpglu + 1.0 ppi on b3789 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on RFFG [c] : 1.0 dtdpglu ==> 1.0 dtdp4d6dg + 1.0 h2o on b3788 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on WECB [c] : 1.0 uacgam ==> 1.0 uacmam on b3786 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on WECG [c] : 1.0 uacmamu + 1.0 unaga ==> 1.0 h + 1.0 udp + 1.0 unagamu on b3794 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on ECA_SYN [c] : 1.0 unagamuf ==> 1.0 eca_EC + 1.0 h + 1.0 udcpdp on Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on DGOA1R [c] : 1.0 2dh3dgal6p <==> 1.0 g3p + 1.0 pyr b3692 b3692 Alternate Carbon Metabolism b3692 Jennie's rules for v2.1 section (JR) b3692 DGOA2 [c] : 1.0 galctn-D ==> 1.0 2dh3dgal + 1.0 h2o b3692 b3692 Alternate Carbon Metabolism b3692 Jennie's rules for v2.1 section (JR) b3692 DGOK [c] : 1.0 2dh3dgal + 1.0 atp ==> 1.0 2dh3dgal6p + 1.0 adp + 1.0 h b3693 b3693 Alternate Carbon Metabolism b3693 Jennie's rules for v2.1 section (JR) b3693 SGBER [c] : 1.0 ru5p-L <==> 1.0 xu5p-D b3583 b3583 Alternate Carbon Metabolism b3583 Jennie's rules for v2.1 section (JR) b3583 SGAH [c] : 1.0 3dgulnp + 1.0 h ==> 1.0 co2 + 1.0 xu5p-L on b4196 Alternate Carbon Metabolism on " *EWB (no regulation given previously, assumed on)" on SGAU [c] : 1.0 xu5p-L ==> 1.0 ru5p-L on b4197 Alternate Carbon Metabolism on " *EWB (no regulation given previously, assumed on)" on SGAER [c] : 1.0 ru5p-L <==> 1.0 xu5p-D on b4198 Alternate Carbon Metabolism on " *EWB (no regulation given previously, assumed on)" on SGBH [c] : 1.0 3dgulnp + 1.0 h ==> 1.0 co2 + 1.0 xu5p-L b3581 b3581 Alternate Carbon Metabolism b3581 Jennie's rules for v2.1 section (JR) b3581 YIAK [c] : 1.0 23doguln + 1.0 h + 1.0 nadh ==> 1.0 3dhguln + 1.0 nad b3575 b3575 Alternate Carbon Metabolism b3575 Alon Changes b3575 PLDA1 [c] : 1.0 h2o + 0.02 pe_EC ==> 0.02 agpe_EC + 1.0 h + 0.36 hdca + 0.07 hdcea + 0.5 ocdcea + 0.02 ttdca + 0.05 ttdcea on b3821 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on PLDA2 [c] : 1.0 h2o + 0.02 pc_EC ==> 0.02 agpc_EC + 1.0 h + 0.36 hdca + 0.07 hdcea + 0.5 ocdcea + 0.02 ttdca + 0.05 ttdcea on b3821 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on PLDA3 [c] : 1.0 h2o + 0.02 pg_EC ==> 0.02 agpg_EC + 1.0 h + 0.36 hdca + 0.07 hdcea + 0.5 ocdcea + 0.02 ttdca + 0.05 ttdcea on b3821 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on PLDB1 [c] : 0.02 agpe_EC + 1.0 h2o ==> 1.0 g3pe + 1.0 h + 0.36 hdca + 0.07 hdcea + 0.5 ocdcea + 0.02 ttdca + 0.05 ttdcea on b3825 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on PLDB2 [c] : 0.02 agpc_EC + 1.0 h2o ==> 1.0 g3pc + 1.0 h + 0.36 hdca + 0.07 hdcea + 0.5 ocdcea + 0.02 ttdca + 0.05 ttdcea on b3825 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on PLDB3 [c] : 0.02 agpg_EC + 1.0 h2o ==> 1.0 g3pg + 1.0 h + 0.36 hdca + 0.07 hdcea + 0.5 ocdcea + 0.02 ttdca + 0.05 ttdcea on b3825 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on PLDB4 [c] : 0.02 agpe_EC + 0.02 pg_EC ==> 0.02 apg_EC + 1.0 g3pe on b3825 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on PLDB5 [c] : 0.02 agpc_EC + 0.02 pg_EC ==> 0.02 apg_EC + 1.0 g3pc on b3825 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on PLDB6 [c] : 0.02 agpg_EC + 0.02 pg_EC ==> 0.02 apg_EC + 1.0 g3pg on b3825 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on GLPQ1 [c] : 1.0 g3pc + 1.0 h2o ==> 1.0 chol + 1.0 glyc3p + 1.0 h b2239 b2239 Cell envelope biosynthesis b2239 Alon Changes b2239 GLPQ2 [c] : 1.0 g3pe + 1.0 h2o ==> 1.0 etha + 1.0 glyc3p + 1.0 h b2239 b2239 Cell envelope biosynthesis b2239 Alon Changes b2239 GLPQ3 [c] : 1.0 g3ps + 1.0 h2o ==> 1.0 glyc3p + 1.0 h + 1.0 ser-L b2239 b2239 Cell envelope biosynthesis b2239 Alon Changes b2239 GLPQ4 [c] : 1.0 g3pg + 1.0 h2o ==> 1.0 glyc + 1.0 glyc3p + 1.0 h b2239 b2239 Cell envelope biosynthesis b2239 Alon Changes b2239 GLPQ5 [c] : 1.0 g3pi + 1.0 h2o ==> 1.0 glyc3p + 1.0 h + 1.0 inost b2239 b2239 Cell envelope biosynthesis b2239 Alon Changes b2239 EUTB [c] : 1.0 etha ==> 1.0 acald + 1.0 nh4 on b2441 AND b2440 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on MANC [c] : 1.0 gdp + 1.0 h + 1.0 man1p ==> 1.0 gdpmann + 1.0 pi on b2049 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on APAH1 [c] : 1.0 ap4a + 1.0 h2o ==> 2.0 adp + 2.0 h on b0049 Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on APAH2 [c] : 1.0 ap5a + 1.0 h2o ==> 1.0 adp + 1.0 atp + 2.0 h on b0049 Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on APAH3 [c] : 1.0 gp4g + 1.0 h2o ==> 2.0 gdp + 2.0 h on b0049 Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on CYAA [c] : 1.0 atp ==> 1.0 camp + 1.0 ppi b3806 b3806 Nucleotide Salvage Pathways b3806 Jennie's rules for v2.1 section (JR) b3806 SUHB [c] : 1.0 h2o + 1.0 mi1p-D ==> 1.0 inost + 1.0 pi on b2533 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on TAM [c] : 1.0 acon-T + 1.0 amet ==> 1.0 aconm + 1.0 ahcys b1519 b1519 Unassigned b1519 Jennie's rules for v2.1 section (JR) b1519 MALY [c] : 1.0 cyst-L + 1.0 h2o ==> 1.0 hcys-L + 1.0 nh4 + 1.0 pyr b1622 b1622 Amino Acid Methionine b1622 Alon Changes b1622 MALZ1 [c] : 1.0 h2o + 1.0 malthp ==> 1.0 glc-D + 1.0 malthx b0403 b0403 Alternate Carbon Metabolism b0403 "The Rest section in the Excel sheet MWC March 29, 2003" b0403 MALZ2 [c] : 1.0 h2o + 1.0 malttr ==> 1.0 glc-D + 1.0 malt b0403 b0403 Alternate Carbon Metabolism b0403 "The Rest section in the Excel sheet MWC March 29, 2003" b0403 MALZ3 [c] : 1.0 h2o + 1.0 maltttr ==> 1.0 glc-D + 1.0 malttr b0403 b0403 Alternate Carbon Metabolism b0403 "The Rest section in the Excel sheet MWC March 29, 2003" b0403 MALZ4 [c] : 1.0 h2o + 1.0 maltpt ==> 1.0 glc-D + 1.0 maltttr b0403 b0403 Alternate Carbon Metabolism b0403 "The Rest section in the Excel sheet MWC March 29, 2003" b0403 MALZ5 [c] : 1.0 h2o + 1.0 malthx ==> 1.0 glc-D + 1.0 maltpt b0403 b0403 Alternate Carbon Metabolism b0403 "The Rest section in the Excel sheet MWC March 29, 2003" b0403 MALQ1 [c] : 1.0 malt + 1.0 malttr ==> 1.0 glc-D + 1.0 maltttr b3416 b3416 Alternate Carbon Metabolism b3416 "The Rest section in the Excel sheet MWC March 29, 2003" b3416 MALQ2 [c] : 1.0 malt + 1.0 maltttr ==> 1.0 glc-D + 1.0 maltpt b3416 b3416 Alternate Carbon Metabolism b3416 "The Rest section in the Excel sheet MWC March 29, 2003" b3416 MALQ3 [c] : 1.0 malt + 1.0 maltpt ==> 1.0 glc-D + 1.0 malthx b3416 b3416 Alternate Carbon Metabolism b3416 "The Rest section in the Excel sheet MWC March 29, 2003" b3416 MALQ4 [c] : 1.0 malt + 1.0 malthx ==> 1.0 glc-D + 1.0 malthp b3416 b3416 Alternate Carbon Metabolism b3416 "The Rest section in the Excel sheet MWC March 29, 2003" b3416 MALP2R [c] : 1.0 malthp + 1.0 pi <==> 1.0 g1p + 1.0 malthx b3417 b3417 Alternate Carbon Metabolism b3417 "The Rest section in the Excel sheet MWC March 29, 2003" b3417 MALP3R [c] : 1.0 malthx + 1.0 pi <==> 1.0 g1p + 1.0 maltpt b3417 b3417 Alternate Carbon Metabolism b3417 "The Rest section in the Excel sheet MWC March 29, 2003" b3417 MALP4R [c] : 1.0 maltpt + 1.0 pi <==> 1.0 g1p + 1.0 maltttr b3417 b3417 Alternate Carbon Metabolism b3417 "The Rest section in the Excel sheet MWC March 29, 2003" b3417 LPXP [c] : 1.0 hdeACP + 1.0 kdo2lipid4 ==> 1.0 ACP + 1.0 kdo2lipid4p on b2378 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on MSBB [c] : 1.0 kdo2lipid4p + 1.0 myrsACP ==> 1.0 ACP + 1.0 lipa_cold on b1855 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on SPEG1 [c] : 1.0 accoa + 1.0 spmd ==> 1.0 N1aspmd + 1.0 coa + 1.0 h on b1584 Amino Acid "Arginine, Spermidine, etc." on " *EWB (no regulation given previously, assumed on)" on SPEG2 [c] : 1.0 accoa + 1.0 spmd ==> 1.0 coa + 1.0 h + 1.0 n8aspmd on b1584 Amino Acid "Arginine, Spermidine, etc." on " *EWB (no regulation given previously, assumed on)" on BETB1 [c] : 1.0 betald + 1.0 h2o + 1.0 nad ==> 1.0 glyb + 2.0 h + 1.0 nadh b0312 b0312 Unassigned b0312 Alon Changes b0312 BETB2 [c] : 1.0 betald + 1.0 h2o + 1.0 nadp ==> 1.0 glyb + 2.0 h + 1.0 nadph b0312 b0312 Unassigned b0312 Alon Changes b0312 BGLA [c] : 1.0 arbt6p + 1.0 h2o ==> 1.0 g6p + 1.0 hqn on b2901 Alternate Carbon Metabolism on " *EWB (no regulation given previously, assumed on)" on BISC1 [c] : 1.0 btnso + 1.0 h + 1.0 nadph ==> 1.0 btn + 1.0 h2o + 1.0 nadp on b3551 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on BISC2 [c] : 1.0 btnso + 1.0 h + 1.0 nadh ==> 1.0 btn + 1.0 h2o + 1.0 nad on b3551 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on SODA [c] : 2.0 h + 2.0 o2- ==> 1.0 h2o2 + 1.0 o2 b3908 b3908 Unassigned b3908 Alon Changes b3908 SODB [c] : 2.0 h + 2.0 o2- ==> 1.0 h2o2 + 1.0 o2 b1656 b1656 Unassigned b1656 NEW ONES in Category 6 b1656 SODC [c] : 2.0 h + 2.0 o2- ==> 1.0 h2o2 + 1.0 o2 b1646 b1646 Unassigned b1646 Jennie's rules for v2.1 section (JR) b1646 MTN2 [c] : 1.0 ahcys + 1.0 h2o ==> 1.0 ade + 1.0 rhcys on b0159 Amino Acid Methionine on " *EWB (no regulation given previously, assumed on)" on FAD1 [c] : 1.0 btcoa + 1.0 fad + 1.0 h2o + 1.0 nad ==> 1.0 aacoa + 1.0 fadh2 + 1.0 h + 1.0 nadh b0221 AND b3846 b0221 AND b3846 Alternate Carbon Metabolism b0221 AND b3846 Alon Changes b0221 AND b3846 PRPBR [c] : 1.0 micit <==> 1.0 pyr + 1.0 succ b0331 b0331 Alternate Carbon Metabolism b0331 Jennie's rules for v2.1 section (JR) b0331 PRPE [c] : 1.0 atp + 1.0 coa + 1.0 ppa ==> 1.0 adp + 1.0 pi + 1.0 ppcoa b0335 b0335 Alternate Carbon Metabolism b0335 Jennie's rules for v2.1 section (JR) b0335 PRPD [c] : 1.0 2mcit ==> 1.0 2mcacn + 1.0 h2o b0334 b0334 Alternate Carbon Metabolism b0334 Jennie's rules for v2.1 section (JR) b0334 ACNA2 [c] : 1.0 2mcacn + 1.0 h2o ==> 1.0 micit b1276 b1276 Alternate Carbon Metabolism b1276 Alon Changes b1276 ACNB2 [c] : 1.0 2mcacn + 1.0 h2o ==> 1.0 micit b0118 b0118 Alternate Carbon Metabolism b0118 Jennie's rules for v2.1 section (JR) b0118 AAS1 [c] : 1.0 ACP + 1.0 atp + 1.0 ttdca ==> 1.0 amp + 1.0 myrsACP + 1.0 ppi on b2836 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on AAS2 [c] : 1.0 ACP + 1.0 atp + 1.0 ttdcea ==> 1.0 amp + 1.0 ppi + 1.0 tdeACP on b2836 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on AAS3 [c] : 1.0 ACP + 1.0 atp + 1.0 hdca ==> 1.0 amp + 1.0 palmACP + 1.0 ppi on b2836 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on AAS4 [c] : 1.0 ACP + 1.0 atp + 1.0 hdcea ==> 1.0 amp + 1.0 hdeACP + 1.0 ppi on b2836 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on AAS5 [c] : 1.0 ACP + 1.0 atp + 1.0 ocdcea ==> 1.0 amp + 1.0 octeACP + 1.0 ppi on b2836 Cell envelope biosynthesis on " *EWB (no regulation given previously, assumed on)" on LUXS [c] : 1.0 rhcys ==> 1.0 dhptd + 1.0 hcys-L on b2687 Amino Acid Methionine on " *EWB (no regulation given previously, assumed on)" on PAAK [c] : 1.0 atp + 1.0 coa + 1.0 pac ==> 1.0 amp + 1.0 phaccoa + 1.0 ppi on b1398 Alternate Carbon Metabolism on " *EWB (no regulation given previously, assumed on)" on TYNA [c] : 1.0 h2o + 1.0 o2 + 1.0 peamn ==> 1.0 h2o2 + 1.0 nh4 + 1.0 pacald b1386 b1386 Alternate Carbon Metabolism b1386 Alon Changes b1386 ATOAD1 [c] : 1.0 acac + 1.0 accoa ==> 1.0 aacoa + 1.0 ac b2222 AND b2221 b2222 AND b2221 Alternate Carbon Metabolism b2222 AND b2221 Fatty Acid (JR) b2222 AND b2221 ATOAD2 [c] : 1.0 accoa + 1.0 but ==> 1.0 ac + 1.0 btcoa b2222 AND b2221 b2222 AND b2221 Alternate Carbon Metabolism b2222 AND b2221 Fatty Acid (JR) b2222 AND b2221 TREA 1.0 H2O[e] + 1.0 TRE[e] ==> 2.0 GLC[e] b1197 b1197 ? b1197 "The Rest section in the Excel sheet MWC March 29, 2003" b1197 FSAR [c] : 1.0 f6p <==> 1.0 dha + 1.0 g3p on b0825 OR b3946 Metabolism Glycolysis/gluconeogenesis on " *EWB (no regulation given previously, assumed on)" on TALCR [c] : 1.0 f6p <==> 1.0 dha + 1.0 g3p on b3946 Metabolism Glycolysis/gluconeogenesis on " *EWB (no regulation given previously, assumed on)" on TRPA2 [c] : 1.0 indole + 1.0 ser-L ==> 1.0 h2o + 1.0 trp-L b1260 AND b1261 b1260 AND b1261 Amino Acid Aromatic Amino Acids b1260 AND b1261 PAAK (NOT PaaX) b1260 AND b1261 TRPA3 [c] : 1.0 3ig3p ==> 1.0 g3p + 1.0 indole b1260 AND b1261 b1260 AND b1261 Amino Acid Aromatic Amino Acids b1260 AND b1261 PAAK (NOT PaaX) b1260 AND b1261 PDXY [c] : 1.0 atp + 1.0 pydx ==> 1.0 adp + 1.0 h + 1.0 pydx5p on b1636 Cofactor and Prosthetic Group Biosynthesis on " *EWB (no regulation given previously, assumed on)" on LTAAR [c] : 1.0 acald + 1.0 gly <==> 1.0 thr-L on b0870 Amino Acid Threonine and Lysine on " *EWB (no regulation given previously, assumed on)" *EWB reversed direction on GLYA4R [c] : 1.0 acald + 1.0 gly <==> 1.0 thr-L b2551 b2551 Amino Acid Threonine and Lysine b2551 Alon Changes *EWB reversed direction b2551 MAZG1 [c] : 1.0 gtp + 1.0 h2o ==> 1.0 gmp + 1.0 h + 1.0 ppi on b2781 Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on MAZG2 [c] : 1.0 atp + 1.0 h2o ==> 1.0 amp + 1.0 h + 1.0 ppi on b2781 Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on MAZG3 [c] : 1.0 ctp + 1.0 h2o ==> 1.0 cmp + 1.0 h + 1.0 ppi on b2781 Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on MAZG4 [c] : 1.0 h2o + 1.0 utp ==> 1.0 h + 1.0 ppi + 1.0 ump on b2781 Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on MAZG5 [c] : 1.0 dgtp + 1.0 h2o ==> 1.0 dgmp + 1.0 h + 1.0 ppi on b2781 Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on MAZG6 [c] : 1.0 datp + 1.0 h2o ==> 1.0 damp + 1.0 h + 1.0 ppi on b2781 Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on MAZG7 [c] : 1.0 dctp + 1.0 h2o ==> 1.0 dcmp + 1.0 h + 1.0 ppi on b2781 Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on MAZG8 [c] : 1.0 dttp + 1.0 h2o ==> 1.0 dtmp + 1.0 h + 1.0 ppi on b2781 Nucleotide Salvage Pathways on " *EWB (no regulation given previously, assumed on)" on ANSB2 [c] : 1.0 gln-L + 1.0 h2o ==> 1.0 glu-L + 1.0 nh4 b2957 b2957 Glutamate metabolism b2957 PAAK (NOT PaaX) b2957 SPONT2 [c] : 1.0 dhptd ==> 1.0 h2o + 1.0 hmfurn on Amino Acid Methionine on " *EWB (no regulation given previously, assumed on)" on NANK [c] : 1.0 acmana + 1.0 atp ==> 1.0 acmanap + 1.0 adp + 1.0 h on b3222 Alternate Carbon Metabolism on " *EWB (no regulation given previously, assumed on)" on NANE [c] : 1.0 acmanap ==> 1.0 acgam6p on b3223 Alternate Carbon Metabolism on " *EWB (no regulation given previously, assumed on)" on DHAK [c] : 1.0 dha + 1.0 pep ==> 1.0 dhap + 1.0 pyr on b1200 AND b1199 AND b1198 Alternate Carbon Metabolism on " *EWB (no regulation given previously, assumed on)" on YAHI [c] : 1.0 atp + 1.0 co2 + 1.0 nh4 ==> 1.0 adp + 1.0 cbp + 2.0 h on b0323 Nitrogen on " *EWB (no regulation given previously, assumed on)" on ARCC [c] : 1.0 atp + 1.0 co2 + 1.0 nh4 ==> 1.0 adp + 1.0 cbp + 2.0 h on b0521 Nitrogen on " *EWB (no regulation given previously, assumed on)" on YQEA [c] : 1.0 atp + 1.0 co2 + 1.0 nh4 ==> 1.0 adp + 1.0 cbp + 2.0 h on b2874 Nitrogen on " *EWB (no regulation given previously, assumed on)" on YDIBR [c] : 1.0 3dhsk + 1.0 h + 1.0 nadph <==> 1.0 nadp + 1.0 skm on b1692 Amino Acid Aromatic Amino Acids on " *EWB (no regulation given previously, assumed on)" on YBIK [c] : 1.0 asn-L + 1.0 h2o ==> 1.0 asp-L + 1.0 nh4 b0828 b0828 Nitrogen b0828 b0828 B1773R [c] : 1.0 fdp <==> 1.0 dhap + 1.0 g3p on b1773 Alternate Carbon Metabolism on " *EWB (no regulation given previously, assumed on)" on YGBLR [c] : 1.0 fc1p <==> 1.0 dhap + 1.0 lald-L on b2738 Alternate Carbon Metabolism on " *EWB (no regulation given previously, assumed on)" on YADFR [c] : 1.0 co2 + 1.0 h2o <==> 1.0 h + 1.0 hco3 on b0126 Nitrogen on " *EWB (no regulation given previously, assumed on)" on YGCY [c] : 1.0 glcr ==> 1.0 5dh4dglc + 1.0 h2o on b2788 Alternate Carbon Metabolism on " *EWB (no regulation given previously, assumed on)" on SGCER [c] : 1.0 ru5p-D <==> 1.0 xu5p-D on b4301 Metabolism Pentose phosphate cycle on " *EWB (no regulation given previously, assumed on)" on YQABR [c] : 1.0 g6p <==> 1.0 g1p on b3665 Alternate Carbon Metabolism on " *EWB (no regulation given previously, assumed on)" * EWB reversed direction on YCJK [c] : 1.0 atp + 1.0 glu-L + 1.0 nh4 ==> 1.0 adp + 1.0 gln-L + 1.0 h + 1.0 pi b1297 b1297 Glutamate metabolism b1297 b1297 YHFWR [c] : 1.0 r1p <==> 1.0 r5p on b3380 Alternate Carbon Metabolism on " *EWB (no regulation given previously, assumed on)" on WCAKR [c] : 1.0 atp + 1.0 gal <==> 1.0 adp + 1.0 gal1p + 1.0 h on b2045 Alternate Carbon Metabolism on " *EWB (no regulation given previously, assumed on)" on EUTDR [c] : 1.0 accoa + 1.0 pi <==> 1.0 actp + 1.0 coa on b2458 Metabolism Pyruvate metabolism on " *EWB (no regulation given previously, assumed on)" on ARABUP1R 1.0 ARAB[e] + 1.0 H[e] <==> 1.0 arab-L[c] + 1.0 h[c] b2841 b2841 Transporters b2841 Alon Changes b2841 ARABUP2 1.0 atp[c] + 1.0 h2o[c] + 1.0 ARAB[e] ==> 1.0 adp[c] + 1.0 arab-L[c] + 1.0 h[c] + 1.0 pi[c] b1898 AND b1899 AND b1900 AND b1901 b1898 AND b1899 AND b1900 AND b1901 Transporters b1898 AND b1899 AND b1900 AND b1901 "The Rest section in the Excel sheet MWC March 29, 2003" b1898 AND b1899 AND b1900 AND b1901 DHAPUPR 1.0 DHA[e] <==> 1.0 dha[c] on Transporters on " *EWB (no regulation given previously, assumed on)" on FRUPTS 1.0 pep[c] + 1.0 FRU[e] ==> 1.0 f1p[c] + 1.0 pyr[c] b2167 AND b2169 AND b2415 AND b2416 b2167 AND b2169 AND b2415 AND b2416 Transporters b2167 AND b2169 AND b2415 AND b2416 "The Rest section in the Excel sheet MWC March 29, 2003" b2167 AND b2169 AND b2415 AND b2416 FUCUPR 1.0 FUC[e] + 1.0 H[e] <==> 1.0 fuc-L[c] + 1.0 h[c] b2801 b2801 Transporters b2801 Alon Changes b2801 GLTLUP 1.0 pep[c] + 1.0 GLTL[e] ==> 1.0 galt1p[c] + 1.0 pyr[c] b2092 AND b2093 AND b2094 AND b2415 AND b2416 b2092 AND b2093 AND b2094 AND b2415 AND b2416 Transporters b2092 AND b2093 AND b2094 AND b2415 AND b2416 Catabolite Repression from Paigen and Park b2092 AND b2093 AND b2094 AND b2415 AND b2416 GALUP1 1.0 GLAC[e] + 1.0 H[e] ==> 1.0 gal[c] + 1.0 h[c] b2943 b2943 Transporters b2943 "The Rest section in the Excel sheet MWC March 29, 2003" b2943 GALUP2 1.0 atp[c] + 1.0 h2o[c] + 1.0 GLAC[e] ==> 1.0 adp[c] + 1.0 gal[c] + 1.0 h[c] + 1.0 pi[c] b2148 AND b2149 AND b2150 b2148 AND b2149 AND b2150 Transporters b2148 AND b2149 AND b2150 Alon Changes b2148 AND b2149 AND b2150 GLTUP 1.0 pep[c] + 1.0 GLT[e] ==> 1.0 pyr[c] + 1.0 sbt6p[c] b2415 AND b2416 AND b2702 AND b2703 AND b2704 b2415 AND b2416 AND b2702 AND b2703 AND b2704 Transporters b2415 AND b2416 AND b2702 AND b2703 AND b2704 Catabolite Repression from Paigen and Park b2415 AND b2416 AND b2702 AND b2703 AND b2704 GLCNUPR 1.0 GLCN[e] + 1.0 H[e] <==> 1.0 glcn[c] + 1.0 h[c] b3415 b3415 Transporters b3415 Alon Changes b3415 MALUP1 1.0 pep[c] + 1.0 MLT[e] ==> 1.0 malt6p[c] + 1.0 pyr[c] b1621 AND b2415 AND b2416 AND b2417 AND b4036 b1621 AND b2415 AND b2416 AND b2417 AND b4036 Transporters b1621 AND b2415 AND b2416 AND b2417 AND b4036 "The Rest section in the Excel sheet MWC March 29, 2003" b1621 AND b2415 AND b2416 AND b2417 AND b4036 MNTUP 1.0 pep[c] + 1.0 MNT[e] ==> 1.0 mnl1p[c] + 1.0 pyr[c] b2415 AND b2416 AND b3599 b2415 AND b2416 AND b3599 Transporters b2415 AND b2416 AND b3599 Catabolite Repression from Paigen and Park b2415 AND b2416 AND b3599 MANNUP 1.0 pep[c] + 1.0 MAN[e] ==> 1.0 man6p[c] + 1.0 pyr[c] b1817 AND b1818 AND b1819 AND b2415 AND b2416 b1817 AND b1818 AND b1819 AND b2415 AND b2416 Transporters b1817 AND b1818 AND b1819 AND b2415 AND b2416 Catabolite Repression from Paigen and Park b1817 AND b1818 AND b1819 AND b2415 AND b2416 MELIUP 1.0 H[e] + 1.0 MELI[e] ==> 1.0 h[c] + 1.0 melib[c] b4120 b4120 Transporters b4120 "The Rest section in the Excel sheet MWC March 29, 2003" b4120 NAGUP 1.0 pep[c] + 1.0 NAG[e] ==> 1.0 acgam6p[c] + 1.0 pyr[c] b0679 AND b2415 AND b2416 b0679 AND b2415 AND b2416 Transporters b0679 AND b2415 AND b2416 "The Rest section in the Excel sheet MWC March 29, 2003" b0679 AND b2415 AND b2416 RMNUP 1.0 H[e] + 1.0 RMN[e] ==> 1.0 h[c] + 1.0 rmn[c] b3907 b3907 Transporters b3907 Alon Changes b3907 SUCUP 1.0 pep[c] + 1.0 SUC[e] ==> 1.0 pyr[c] + 1.0 suc6p[c] on Transporters on " *EWB (no regulation given previously, assumed on)" on TREUP 1.0 pep[c] + 1.0 TRE[e] ==> 1.0 pyr[c] + 1.0 tre6p[c] b2415 AND b2416 AND b2417 AND b4240 b2415 AND b2416 AND b2417 AND b4240 Transporters b2415 AND b2416 AND b2417 AND b4240 "The Rest section in the Excel sheet MWC March 29, 2003" b2415 AND b2416 AND b2417 AND b4240 XYLUP1 1.0 H[e] + 1.0 XYL[e] ==> 1.0 h[c] + 1.0 xyl-D[c] b4031 b4031 Transporters b4031 "The Rest section in the Excel sheet MWC March 29, 2003" b4031 XYLUP 1.0 atp[c] + 1.0 h2o[c] + 1.0 XYL[e] ==> 1.0 adp[c] + 1.0 h[c] + 1.0 pi[c] + 1.0 xyl-D[c] b3566 AND b3567 AND b3568 b3566 AND b3567 AND b3568 Transporters b3566 AND b3567 AND b3568 "The Rest section in the Excel sheet MWC March 29, 2003" b3566 AND b3567 AND b3568 DALAUP2R 1.0 DALA[e] + 1.0 H[e] <==> 1.0 ala-D[c] + 1.0 h[c] on b4208 Transporters on " *EWB (no regulation given previously, assumed on)" on DSERUPR 1.0 H[e] + 1.0 DSER[e] <==> 1.0 h[c] + 1.0 ser-D[c] on b4208 Transporters on " *EWB (no regulation given previously, assumed on)" on MDAPUP 1.0 atp[c] + 1.0 h2o[c] + 1.0 MDAP[e] ==> 1.0 26dap-M[c] + 1.0 adp[c] + 1.0 h[c] + 1.0 pi[c] on Transporters on " *EWB (no regulation given previously, assumed on)" on GABAUP 1.0 GABA[e] + 1.0 H[e] ==> 1.0 4abut[c] + 1.0 h[c] on b2663 Transporters on " *EWB (no regulation given previously, assumed on)" on ORNUP 1.0 atp[c] + 1.0 h2o[c] + 1.0 ORN[e] ==> 1.0 adp[c] + 1.0 h[c] + 1.0 orn[c] + 1.0 pi[c] b2306 AND b2307 AND b2308 AND b2310 b2306 AND b2307 AND b2308 AND b2310 Transporters b2306 AND b2307 AND b2308 AND b2310 "The Rest section in the Excel sheet MWC March 29, 2003" b2306 AND b2307 AND b2308 AND b2310 URAUP 1.0 H[e] + 1.0 URA[e] ==> 1.0 h[c] + 1.0 ura[c] on b2497 Transporters on " *EWB (no regulation given previously, assumed on)" on CYTSUP 1.0 CYTS[e] + 1.0 H[e] ==> 1.0 csn[c] + 1.0 h[c] b0336 b0336 Transporters b0336 Purine-Pyrimidine Salvage and Transport b0336 GNUPR 1.0 GN[e] <==> 1.0 gua[c] on Transporters on " *EWB (no regulation given previously, assumed on)" on HYXNUPR 1.0 HYXN[e] <==> 1.0 hxan[c] on Transporters on " *EWB (no regulation given previously, assumed on)" on XTSNUPR 1.0 H[e] + 1.0 XTSN[e] <==> 1.0 h[c] + 1.0 xtsn[c] b2406 b2406 Transporters b2406 Purine-Pyrimidine Salvage and Transport b2406 XANUPR 1.0 XAN[e] <==> 1.0 xan[c] on Transporters on " *EWB (no regulation given previously, assumed on)" on NCGUP1 1.0 ADN[e] + 1.0 H[e] ==> 1.0 adn[c] + 1.0 h[c] b2964 b2964 Transporters b2964 Purine-Pyrimidine Salvage and Transport b2964 NCGUP2 1.0 GSN[e] + 1.0 H[e] ==> 1.0 gsn[c] + 1.0 h[c] b2964 b2964 Transporters b2964 Purine-Pyrimidine Salvage and Transport b2964 NCGUP3 1.0 H[e] + 1.0 URI[e] ==> 1.0 h[c] + 1.0 uri[c] b2964 b2964 Transporters b2964 Purine-Pyrimidine Salvage and Transport b2964 NCGUP4 1.0 CYTD[e] + 1.0 H[e] ==> 1.0 cytd[c] + 1.0 h[c] b2964 b2964 Transporters b2964 Purine-Pyrimidine Salvage and Transport b2964 NCGUP5 1.0 H[e] + 1.0 INS[e] ==> 1.0 h[c] + 1.0 ins[c] b2964 b2964 Transporters b2964 Purine-Pyrimidine Salvage and Transport b2964 NCGUP7 1.0 H[e] + 1.0 DT[e] ==> 1.0 h[c] + 1.0 thymd[c] b2964 b2964 Transporters b2964 Purine-Pyrimidine Salvage and Transport b2964 NCGUP8 1.0 DIN[e] + 1.0 H[e] ==> 1.0 din[c] + 1.0 h[c] b2964 b2964 Transporters b2964 Purine-Pyrimidine Salvage and Transport b2964 NCGUP9 1.0 DG[e] + 1.0 H[e] ==> 1.0 dgsn[c] + 1.0 h[c] b2964 b2964 Transporters b2964 Purine-Pyrimidine Salvage and Transport b2964 NCGUP10 1.0 DA[e] + 1.0 H[e] ==> 1.0 dad-2[c] + 1.0 h[c] b2964 b2964 Transporters b2964 Purine-Pyrimidine Salvage and Transport b2964 NCGUP11 1.0 DC[e] + 1.0 H[e] ==> 1.0 dcyt[c] + 1.0 h[c] b2964 b2964 Transporters b2964 Purine-Pyrimidine Salvage and Transport b2964 NCGUP12 1.0 DU[e] + 1.0 H[e] ==> 1.0 duri[c] + 1.0 h[c] b2964 b2964 Transporters b2964 Purine-Pyrimidine Salvage and Transport b2964 NCCUP1 1.0 ADN[e] + 1.0 H[e] ==> 1.0 adn[c] + 1.0 h[c] b2393 b2393 Transporters b2393 Purine-Pyrimidine Salvage and Transport b2393 NCCUP2 1.0 H[e] + 1.0 URI[e] ==> 1.0 h[c] + 1.0 uri[c] b2393 b2393 Transporters b2393 Purine-Pyrimidine Salvage and Transport b2393 NCCUP3 1.0 CYTD[e] + 1.0 H[e] ==> 1.0 cytd[c] + 1.0 h[c] b2393 b2393 Transporters b2393 Purine-Pyrimidine Salvage and Transport b2393 NCCUP4 1.0 H[e] + 1.0 DT[e] ==> 1.0 h[c] + 1.0 thymd[c] b2393 b2393 Transporters b2393 Purine-Pyrimidine Salvage and Transport b2393 NCCUP5 1.0 DA[e] + 1.0 H[e] ==> 1.0 dad-2[c] + 1.0 h[c] b2393 b2393 Transporters b2393 Purine-Pyrimidine Salvage and Transport b2393 NCCUP6 1.0 DC[e] + 1.0 H[e] ==> 1.0 dcyt[c] + 1.0 h[c] b2393 b2393 Transporters b2393 Purine-Pyrimidine Salvage and Transport b2393 NCCUP7 1.0 DU[e] + 1.0 H[e] ==> 1.0 duri[c] + 1.0 h[c] b2393 b2393 Transporters b2393 Purine-Pyrimidine Salvage and Transport b2393 POTUP1 1.0 atp[c] + 1.0 h2o[c] + 1.0 K[e] ==> 1.0 adp[c] + 1.0 h[c] + 1.0 k[c] + 1.0 pi[c] b0698 AND b0697 AND b0696 b0698 AND b0697 AND b0696 Transporters b0698 AND b0697 AND b0696 Alon Changes b0698 AND b0697 AND b0696 POTUP2R 1.0 H[e] + 1.0 K[e] <==> 1.0 h[c] + 1.0 k[c] on b1363 Transporters on " *EWB (no regulation given previously, assumed on)" on POTUP3R 1.0 H[e] + 1.0 K[e] <==> 1.0 h[c] + 1.0 k[c] on b3849 Transporters on " *EWB (no regulation given previously, assumed on)" on PIUP1 1.0 atp[c] + 1.0 h2o[c] + 1.0 PI[e] ==> 1.0 adp[c] + 1.0 h[c] + 2.0 pi[c] b3725 AND b3726 AND b3727 AND b3728 b3725 AND b3726 AND b3727 AND b3728 Transporters b3725 AND b3726 AND b3727 AND b3728 "The Rest section in the Excel sheet MWC March 29, 2003" b3725 AND b3726 AND b3727 AND b3728 PIUP3R 1.0 H[e] + 1.0 PI[e] <==> 1.0 h[c] + 1.0 pi[c] b2987 b2987 Transporters b2987 "The Rest section in the Excel sheet MWC March 29, 2003" b2987 GL3PUP 1.0 pi[c] + 1.0 GL3P[e] ==> 1.0 glyc3p[c] + 1.0 PI[e] b2240 b2240 Transporters b2240 Alon Changes b2240 DCUA4 1.0 FUM[e] + 3.0 H[e] ==> 1.0 fum[c] + 3.0 h[c] on b4138 Transporters on " *EWB (no regulation given previously, assumed on)" on DCUA3 3.0 H[e] + 1.0 MAL[e] ==> 3.0 h[c] + 1.0 mal-L[c] on b4138 Transporters on " *EWB (no regulation given previously, assumed on)" on DCUB4 1.0 FUM[e] + 3.0 H[e] ==> 1.0 fum[c] + 3.0 h[c] b4123 b4123 Transporters b4123 Catabolite Repression from Paigen and Park b4123 DCUB3 3.0 H[e] + 1.0 MAL[e] ==> 3.0 h[c] + 1.0 mal-L[c] b4123 b4123 Transporters b4123 Catabolite Repression from Paigen and Park b4123 DCTA4 1.0 FUM[e] + 2.0 H[e] ==> 1.0 fum[c] + 2.0 h[c] b3528 b3528 Transporters b3528 Catabolite Repression from Paigen and Park b3528 DCTA3 2.0 H[e] + 1.0 MAL[e] ==> 2.0 h[c] + 1.0 mal-L[c] b3528 b3528 Transporters b3528 Catabolite Repression from Paigen and Park b3528 DCUA5R 1.0 succ[c] + 1.0 FUM[e] <==> 1.0 fum[c] + 1.0 SUCC[e] on b4138 Transporters on " *EWB (no regulation given previously, assumed on)" on DCUB5R 1.0 succ[c] + 1.0 FUM[e] <==> 1.0 fum[c] + 1.0 SUCC[e] b4123 b4123 Transporters b4123 Catabolite Repression from Paigen and Park b4123 FAUP1 1.0 H[e] + 1.0 C140[e] ==> 1.0 h[c] + 1.0 ttdca[c] b2344 b2344 Transporters b2344 Alon Changes b2344 FAUP2 1.0 H[e] + 1.0 C160[e] ==> 1.0 h[c] + 1.0 hdca[c] b2344 b2344 Transporters b2344 Alon Changes b2344 FAUP3 1.0 H[e] + 1.0 C180[e] ==> 1.0 h[c] + 1.0 ocdca[c] b2344 b2344 Transporters b2344 Alon Changes b2344 AKGUPR 1.0 AKG[e] + 1.0 H[e] <==> 1.0 akg[c] + 1.0 h[c] b2587 b2587 Transporters b2587 NEW ONES in Category 6 b2587 PANTOUP 1.0 NA[e] + 1.0 PNTO[e] ==> 1.0 na1[c] + 1.0 pnto-R[c] on b3258 Transporters on " *EWB (no regulation given previously, assumed on)" on SIALAUP 1.0 SLA[e] + 1.0 H[e] ==> 1.0 acnam[c] + 1.0 h[c] on b3224 Transporters on " *EWB (no regulation given previously, assumed on)" on UREATXR 1.0 UREA[e] <==> 1.0 urea[c] on Transporters on " *EWB (no regulation given previously, assumed on)" on GLALTXR 1.0 GLAL[e] <==> 1.0 glyald[c] on Transporters on " *EWB (no regulation given previously, assumed on)" on ACALTXR 1.0 ACAL[e] <==> 1.0 acald[c] on Transporters on " *EWB (no regulation given previously, assumed on)" on FE2UP 1.0 atp[c] + 1.0 h2o[c] + 1.0 FE2[e] ==> 1.0 adp[c] + 1.0 fe2[c] + 1.0 h[c] + 1.0 pi[c] on b3409 Transporters on " *EWB (no regulation given previously, assumed on)" on SFUA 1.0 atp[c] + 1.0 h2o[c] + 1.0 THMN[e] ==> 1.0 adp[c] + 1.0 h[c] + 1.0 pi[c] + 1.0 thm[c] b0066 AND b0067 AND b0068 b0066 AND b0067 AND b0068 Transporters b0066 AND b0067 AND b0068 NEW ONES in Category 6 b0066 AND b0067 AND b0068 TAUA 1.0 atp[c] + 1.0 h2o[c] + 1.0 TAURN[e] ==> 1.0 adp[c] + 1.0 h[c] + 1.0 pi[c] + 1.0 taur[c] b0365 AND b0366 AND b0367 b0365 AND b0366 AND b0367 Transporters b0365 AND b0366 AND b0367 Alon Changes b0365 AND b0366 AND b0367 BTUB 1.0 atp[c] + 1.0 h2o[c] + 1.0 VITB12[e] ==> 1.0 adp[c] + 1.0 cbl1[c] + 1.0 h[c] + 1.0 pi[c] on b3966 AND b1252 AND b3006 AND b3005 AND b1709 AND b1711 AND b0158 Transporters on " *EWB (no regulation given previously, assumed on)" on UHPT1 2.0 pi[c] + 1.0 G6P[e] ==> 1.0 g6p[c] + 2.0 PI[e] b3666 b3666 Transporters b3666 Catabolite Repression from Paigen and Park b3666 UHPT2 2.0 pi[c] + 1.0 FUC1P[e] ==> 1.0 fuc1p-L[c] + 2.0 PI[e] on b3666 Transporters on " *EWB (no regulation given previously, assumed on)" on UHPT3 2.0 pi[c] + 1.0 MAN6P[e] ==> 1.0 man6p[c] + 2.0 PI[e] on b3666 Transporters on " *EWB (no regulation given previously, assumed on)" on LLDP2R 1.0 GLCLT[e] + 1.0 H[e] <==> 1.0 glyclt[c] + 1.0 h[c] b3603 b3603 Transporters b3603 Alon Changes b3603 LLDP3R 1.0 H[e] + 1.0 LLAC[e] <==> 1.0 h[c] + 1.0 lac-L[c] b3603 b3603 Transporters b3603 Alon Changes b3603 EXUT1R 1.0 GALRNT[e] + 1.0 H[e] <==> 1.0 galur[c] + 1.0 h[c] b3093 b3093 Transporters b3093 PAAK (NOT PaaX) b3093 EXUT2R 1.0 GLCRNT[e] + 1.0 H[e] <==> 1.0 glcur[c] + 1.0 h[c] b3093 b3093 Transporters b3093 PAAK (NOT PaaX) b3093 IDNT1R 1.0 H[e] + 1.0 IDN[e] <==> 1.0 h[c] + 1.0 idon-L[c] b4265 b4265 Transporters b4265 PAAK (NOT PaaX) b4265 IDNT2R 1.0 GLCN[e] + 1.0 H[e] <==> 1.0 glcn[c] + 1.0 h[c] b4265 b4265 Transporters b4265 PAAK (NOT PaaX) b4265 KDGTR 1.0 KDG[e] + 1.0 H[e] <==> 1.0 2ddglcn[c] + 1.0 h[c] b3909 b3909 Transporters b3909 PAAK (NOT PaaX) b3909 DGOTR 1.0 GALNT[e] + 1.0 H[e] <==> 1.0 galctn-D[c] + 1.0 h[c] b3691 b3691 Transporters b3691 PAAK (NOT PaaX) b3691 CITT 1.0 succ[c] + 1.0 CIT[e] ==> 1.0 cit[c] + 1.0 SUCC[e] b0612 b0612 Transporters b0612 PAAK (NOT PaaX) b0612 BETTR 1.0 CHOL[e] + 1.0 H[e] <==> 1.0 chol[c] + 1.0 h[c] b0314 b0314 Transporters b0314 Alon Changes b0314 MTRR 1.0 H[e] + 1.0 INDOLE[e] <==> 1.0 h[c] + 1.0 indole[c] b3161 b3161 Transporters b3161 "The Rest section in the Excel sheet MWC March 29, 2003" b3161 MANX2 1.0 pep[c] + 1.0 NAMAN[e] ==> 1.0 acmanap[c] + 1.0 pyr[c] b1817 AND b1818 AND b1819 AND b2415 AND b2416 b1817 AND b1818 AND b1819 AND b2415 AND b2416 Transporters b1817 AND b1818 AND b1819 AND b2415 AND b2416 "The Rest section in the Excel sheet MWC March 29, 2003" b1817 AND b1818 AND b1819 AND b2415 AND b2416 MALE1 1.0 atp[c] + 1.0 h2o[c] + 1.0 MLT[e] ==> 1.0 adp[c] + 1.0 h[c] + 1.0 malt[c] + 1.0 pi[c] b4032 AND b4033 AND b4034 AND b4035 AND b4036 b4032 AND b4033 AND b4034 AND b4035 AND b4036 Transporters b4032 AND b4033 AND b4034 AND b4035 AND b4036 "The Rest section in the Excel sheet MWC March 29, 2003" b4032 AND b4033 AND b4034 AND b4035 AND b4036 MALE2 1.0 atp[c] + 1.0 h2o[c] + 1.0 MLTTR[e] ==> 1.0 adp[c] + 1.0 h[c] + 1.0 malttr[c] + 1.0 pi[c] b4032 AND b4033 AND b4034 AND b4035 AND b4036 b4032 AND b4033 AND b4034 AND b4035 AND b4036 Transporters b4032 AND b4033 AND b4034 AND b4035 AND b4036 "The Rest section in the Excel sheet MWC March 29, 2003" b4032 AND b4033 AND b4034 AND b4035 AND b4036 MALE3 1.0 atp[c] + 1.0 h2o[c] + 1.0 MLTTT[e] ==> 1.0 adp[c] + 1.0 h[c] + 1.0 maltttr[c] + 1.0 pi[c] b4032 AND b4033 AND b4034 AND b4035 AND b4036 b4032 AND b4033 AND b4034 AND b4035 AND b4036 Transporters b4032 AND b4033 AND b4034 AND b4035 AND b4036 "The Rest section in the Excel sheet MWC March 29, 2003" b4032 AND b4033 AND b4034 AND b4035 AND b4036 MALE4 1.0 atp[c] + 1.0 h2o[c] + 1.0 MLTHX[e] ==> 1.0 adp[c] + 1.0 h[c] + 1.0 malthx[c] + 1.0 pi[c] b4032 AND b4033 AND b4034 AND b4035 AND b4036 b4032 AND b4033 AND b4034 AND b4035 AND b4036 Transporters b4032 AND b4033 AND b4034 AND b4035 AND b4036 "The Rest section in the Excel sheet MWC March 29, 2003" b4032 AND b4033 AND b4034 AND b4035 AND b4036 MALE5 1.0 atp[c] + 1.0 h2o[c] + 1.0 MLTPT[e] ==> 1.0 adp[c] + 1.0 h[c] + 1.0 maltpt[c] + 1.0 pi[c] b4032 AND b4033 AND b4034 AND b4035 AND b4036 b4032 AND b4033 AND b4034 AND b4035 AND b4036 Transporters b4032 AND b4033 AND b4034 AND b4035 AND b4036 "The Rest section in the Excel sheet MWC March 29, 2003" b4032 AND b4033 AND b4034 AND b4035 AND b4036 NIRCR 1.0 H[e] + 1.0 NO2[e] <==> 1.0 h[c] + 1.0 no2[c] b3367 b3367 Transporters b3367 PAAK (NOT PaaX) b3367 NARK1R 1.0 H[e] + 1.0 NO2[e] <==> 1.0 h[c] + 1.0 no2[c] b1223 b1223 Transporters b1223 Alon Changes b1223 NARU 1.0 no2[c] + 1.0 NO3[e] ==> 1.0 no3[c] + 1.0 NO2[e] on b1469 Transporters on " *EWB (no regulation given previously, assumed on)" on NARK2 1.0 no2[c] + 1.0 NO3[e] ==> 1.0 no3[c] + 1.0 NO2[e] b1223 b1223 Transporters b1223 Alon Changes b1223 METDUP 1.0 atp[c] + 1.0 h2o[c] + 1.0 METD[e] ==> 1.0 adp[c] + 1.0 h[c] + 1.0 met-D[c] + 1.0 pi[c] b0197 AND b0198 AND b0199 b0197 AND b0198 AND b0199 Transporters b0197 AND b0198 AND b0199 PAAK (NOT PaaX) b0197 AND b0198 AND b0199 XAPB1R 1.0 H[e] + 1.0 INS[e] <==> 1.0 h[c] + 1.0 ins[c] b2406 b2406 Transporters b2406 PAAK (NOT PaaX) b2406 XAPB2R 1.0 ADN[e] + 1.0 H[e] <==> 1.0 adn[c] + 1.0 h[c] b2406 b2406 Transporters b2406 PAAK (NOT PaaX) b2406 XAPB3R 1.0 CYTD[e] + 1.0 H[e] <==> 1.0 cytd[c] + 1.0 h[c] b2406 b2406 Transporters b2406 PAAK (NOT PaaX) b2406 XAPB4R 1.0 H[e] + 1.0 URI[e] <==> 1.0 h[c] + 1.0 uri[c] b2406 b2406 Transporters b2406 PAAK (NOT PaaX) b2406 XAPB5R 1.0 H[e] + 1.0 DT[e] <==> 1.0 h[c] + 1.0 thymd[c] b2406 b2406 Transporters b2406 PAAK (NOT PaaX) b2406 DCUC2R 1.0 succ[c] + 1.0 FUM[e] <==> 1.0 fum[c] + 1.0 SUCC[e] b0621 b0621 Transporters b0621 PAAK (NOT PaaX) b0621 DCUC3 1.0 FUM[e] + 3.0 H[e] ==> 1.0 fum[c] + 3.0 h[c] b0621 b0621 Transporters b0621 PAAK (NOT PaaX) b0621 CNOP 1.0 CNO[e] + 1.0 H[e] ==> 1.0 cynt[c] + 1.0 h[c] b0341 b0341 Transporters b0341 PAAK (NOT PaaX) b0341 MALX1 1.0 pep[c] + 1.0 GLC[e] ==> 1.0 g6p[c] + 1.0 pyr[c] on b1621 Transporters on " *EWB (no regulation given previously, assumed on)" on PTSG 1.0 pep[c] + 1.0 NAG[e] ==> 1.0 acgam6p[c] + 1.0 pyr[c] b1101 AND b2415 AND b2416 AND b2417 b1101 AND b2415 AND b2416 AND b2417 Transporters b1101 AND b2415 AND b2416 AND b2417 PAAK (NOT PaaX) b1101 AND b2415 AND b2416 AND b2417 MALX2 1.0 pep[c] + 1.0 GLC[e] ==> 1.0 g6p[c] + 1.0 pyr[c] b1817 AND b1818 AND b1819 AND b2415 AND b2416 b1817 AND b1818 AND b1819 AND b2415 AND b2416 Transporters b1817 AND b1818 AND b1819 AND b2415 AND b2416 "The Rest section in the Excel sheet MWC March 29, 2003" b1817 AND b1818 AND b1819 AND b2415 AND b2416 MALX3 1.0 pep[c] + 1.0 FRU[e] ==> 1.0 f6p[c] + 1.0 pyr[c] b1817 AND b1818 AND b1819 AND b2415 AND b2416 b1817 AND b1818 AND b1819 AND b2415 AND b2416 Transporters b1817 AND b1818 AND b1819 AND b2415 AND b2416 "The Rest section in the Excel sheet MWC March 29, 2003" b1817 AND b1818 AND b1819 AND b2415 AND b2416 MALX4 1.0 pep[c] + 1.0 GLCA[e] ==> 1.0 gam6p[c] + 1.0 pyr[c] b1817 AND b1818 AND b1819 AND b2415 AND b2416 b1817 AND b1818 AND b1819 AND b2415 AND b2416 Transporters b1817 AND b1818 AND b1819 AND b2415 AND b2416 "The Rest section in the Excel sheet MWC March 29, 2003" b1817 AND b1818 AND b1819 AND b2415 AND b2416 GNTPR 1.0 GLCN[e] + 1.0 H[e] <==> 1.0 glcn[c] + 1.0 h[c] b4321 b4321 Transporters b4321 PAAK (NOT PaaX) b4321 UGPA 1.0 atp[c] + 1.0 h2o[c] + 1.0 GL3P[e] ==> 1.0 adp[c] + 1.0 glyc3p[c] + 1.0 h[c] + 1.0 pi[c] b3450 AND b3451 AND b3452 AND b3453 b3450 AND b3451 AND b3452 AND b3453 Transporters b3450 AND b3451 AND b3452 AND b3453 PAAK (NOT PaaX) b3450 AND b3451 AND b3452 AND b3453 POTE1R 1.0 H[e] + 1.0 PTRC[e] <==> 1.0 h[c] + 1.0 ptrc[c] on b0692 Transporters on " *EWB (no regulation given previously, assumed on)" on POTE2R 1.0 orn[c] + 1.0 PTRC[e] <==> 1.0 ptrc[c] + 1.0 ORN[e] on b0692 Transporters on " *EWB (no regulation given previously, assumed on)" on CYCAR 1.0 ALA[e] + 1.0 H[e] <==> 1.0 ala-L[c] + 1.0 h[c] on b4208 Transporters on " *EWB (no regulation given previously, assumed on)" on KDGT2R 1.0 GLCRNT[e] + 1.0 H[e] <==> 1.0 glcur[c] + 1.0 h[c] b3909 b3909 Transporters b3909 PAAK (NOT PaaX) b3909 GLCA1R 1.0 H[e] + 1.0 LAC[e] <==> 1.0 h[c] + 1.0 lac-D[c] b2975 b2975 Transporters b2975 PAAK (NOT PaaX) b2975 GLCA2R 1.0 GLCLT[e] + 1.0 H[e] <==> 1.0 glyclt[c] + 1.0 h[c] b2975 b2975 Transporters b2975 PAAK (NOT PaaX) b2975 CAIT 1.0 gbbtn[c] + 1.0 CRN[e] ==> 1.0 crn[c] + 1.0 BBT[e] b0040 b0040 Transporters b0040 PAAK (NOT PaaX) b0040 HCATR 1.0 H[e] + 1.0 PPPNT[e] <==> 1.0 h[c] + 1.0 pppn[c] on b2536 Transporters on " *EWB (no regulation given previously, assumed on)" on YICE1R 1.0 AD[e] + 1.0 H[e] <==> 1.0 ade[c] + 1.0 h[c] on b3654 Transporters on " *EWB (no regulation given previously, assumed on)" on YTFQ2R 1.0 ALA[e] + 1.0 H[e] <==> 1.0 ala-L[c] + 1.0 h[c] on b4227 Transporters on " *EWB (no regulation given previously, assumed on)" on ALLPR 1.0 ALTN[e] + 1.0 H[e] <==> 1.0 alltn[c] + 1.0 h[c] on b0511 Transporters on " *EWB (no regulation given previously, assumed on)" on ARCDR 1.0 orn[c] + 1.0 ARG[e] <==> 1.0 arg-L[c] + 1.0 ORN[e] on b1605 Transporters on " *EWB (no regulation given previously, assumed on)" on YEAV1R 1.0 BET[e] + 1.0 H[e] <==> 1.0 glyb[c] + 1.0 h[c] on b1801 Transporters on " *EWB (no regulation given previously, assumed on)" on YEHX1 1.0 atp[c] + 1.0 h2o[c] + 1.0 BET[e] ==> 1.0 adp[c] + 1.0 glyb[c] + 1.0 h[c] + 1.0 pi[c] b2128 AND b2129 AND b2130 AND b2131 b2128 AND b2129 AND b2130 AND b2131 Transporters b2128 AND b2129 AND b2130 AND b2131 NEW ONES in Category 6 b2128 AND b2129 AND b2130 AND b2131 YEAV3R 1.0 CHOL[e] + 1.0 H[e] <==> 1.0 chol[c] + 1.0 h[c] on b1801 Transporters on " *EWB (no regulation given previously, assumed on)" on YEHX3 1.0 atp[c] + 1.0 h2o[c] + 1.0 CHOL[e] ==> 1.0 adp[c] + 1.0 chol[c] + 1.0 h[c] + 1.0 pi[c] b2128 AND b2129 AND b2130 AND b2131 b2128 AND b2129 AND b2130 AND b2131 Transporters b2128 AND b2129 AND b2130 AND b2131 NEW ONES in Category 6 b2128 AND b2129 AND b2130 AND b2131 YTFQ1 1.0 atp[c] + 1.0 h2o[c] + 1.0 RIB[e] ==> 1.0 adp[c] + 1.0 h[c] + 1.0 pi[c] + 1.0 rib-D[c] on b4227 Transporters on " *EWB (no regulation given previously, assumed on)" on FOCBR 1.0 FOR[e] <==> 1.0 for[c] b2492 b2492 Transporters b2492 Alon Changes b2492 XASAR 1.0 4abut[c] + 1.0 GLU[e] <==> 1.0 glu-L[c] + 1.0 GABA[e] on b1492 Transporters on " *EWB (no regulation given previously, assumed on)" on GARP2R 1.0 GALRT[e] + 1.0 H[e] <==> 1.0 galct-D[c] + 1.0 h[c] on b3127 Transporters on " *EWB (no regulation given previously, assumed on)" on GARP1R 1.0 GLRT[e] + 1.0 H[e] <==> 1.0 glcr[c] + 1.0 h[c] on b3127 Transporters on " *EWB (no regulation given previously, assumed on)" on GUDPR 1.0 GLRT[e] + 1.0 H[e] <==> 1.0 glcr[c] + 1.0 h[c] on Transporters on " *EWB (no regulation given previously, assumed on)" on YAAJR 1.0 GLY[e] + 1.0 H[e] <==> 1.0 gly[c] + 1.0 h[c] on b0007 Transporters on " *EWB (no regulation given previously, assumed on)" on YEAV2R 1.0 GLY[e] + 1.0 H[e] <==> 1.0 gly[c] + 1.0 h[c] on b1801 Transporters on " *EWB (no regulation given previously, assumed on)" on YICE2 1.0 GN[e] + 1.0 H[e] ==> 1.0 gua[c] + 1.0 h[c] on b3654 Transporters on " *EWB (no regulation given previously, assumed on)" on GLCA3R 1.0 H[e] + 1.0 LLAC[e] <==> 1.0 h[c] + 1.0 lac-L[c] b2975 b2975 Transporters b2975 PAAK (NOT PaaX) b2975 YDCT1 1.0 atp[c] + 1.0 h2o[c] + 1.0 PTRC[e] ==> 1.0 adp[c] + 1.0 h[c] + 1.0 pi[c] + 1.0 ptrc[c] on b1441 Transporters on " *EWB (no regulation given previously, assumed on)" on YDCT2 1.0 atp[c] + 1.0 h2o[c] + 1.0 SPMD[e] ==> 1.0 adp[c] + 1.0 h[c] + 1.0 pi[c] + 1.0 spmd[c] on b1441 Transporters on " *EWB (no regulation given previously, assumed on)" on YGJER 1.0 succ[c] + 1.0 TART[e] <==> 1.0 tartr-L[c] + 1.0 SUCC[e] on b3063 Transporters on " *EWB (no regulation given previously, assumed on)" on YCDGR 1.0 H[e] + 1.0 URA[e] <==> 1.0 h[c] + 1.0 ura[c] on b1006 Transporters on " *EWB (no regulation given previously, assumed on)" on YICE3 1.0 H[e] + 1.0 XAN[e] ==> 1.0 h[c] + 1.0 xan[c] on b3654 Transporters on " *EWB (no regulation given previously, assumed on)" on P12PDUPR 1.0 12PPD[e] <==> 1.0 12ppd-S[c] on Transporters on " *EWB (no regulation given previously, assumed on)" "*EWB name or rxn orrigionally 12PPDUPR, changed for consitancy with matlab varialb estandards" on MHPT1R 1.0 HPPPNT[e] + 1.0 H[e] <==> 1.0 3hpppn[c] + 1.0 h[c] on b0353 Transporters on " *EWB (no regulation given previously, assumed on)" on YIAO 1.0 atp[c] + 1.0 h2o[c] + 1.0 SUCC[e] ==> 1.0 adp[c] + 1.0 h[c] + 1.0 pi[c] + 1.0 succ[c] b3579 b3579 Transporters b3579 Alon Changes b3579 MHPT2R 1.0 HCI[e] + 1.0 H[e] <==> 1.0 3hcinnm[c] + 1.0 h[c] on b0353 Transporters on " *EWB (no regulation given previously, assumed on)" on ATOE1R 1.0 ACTOAC[e] + 1.0 H[e] <==> 1.0 acac[c] + 1.0 h[c] b2223 b2223 Transporters b2223 Fatty Acid (JR) b2223 ATOE2R 1.0 BUTRAT[e] + 1.0 H[e] <==> 1.0 but[c] + 1.0 h[c] b2223 b2223 Transporters b2223 Fatty Acid (JR) b2223 LLDD1 [c] : 1.0 lac-L + 1.0 q8 ==> 1.0 pyr + 1.0 q8h2 b3605 b3605 Transporters b3605 Catabolite Repression from Paigen and Park b3605 LLDD2 [c] : 1.0 lac-L + 1.0 mqn8 ==> 1.0 mql8 + 1.0 pyr b3605 b3605 Transporters b3605 Catabolite Repression from Paigen and Park b3605 LEUC2R [c] : 1.0 2ippm + 1.0 h2o <==> 1.0 3c3hmp b0072 b0072 Transporters b0072 Amino Acids b0072 LEUB2 [c] : 1.0 3c4mop + 1.0 h ==> 1.0 4mop + 1.0 co2 b0073 b0073 Transporters b0073 Amino Acids b0073 H2OTR 1.0 H2O[e] <==> 1.0 h2o[c] on Transporters on " *EWB (no regulation given previously, assumed on)" on SPONT3 [c] : 1.0 h2s + 2.0 o2 ==> 2.0 h + 1.0 so4 on Transporters on " *EWB (no regulation given previously, assumed on)" on H2STX 1.0 h2s[c] ==> 1.0 H2S[e] on Transporters on " *EWB (no regulation given previously, assumed on)" on INDOLETX 1.0 indole[c] + 1.0 H[e] ==> 1.0 INDOLE[e] + 1.0 h[c] on b3161 Transporters on " *EWB (no regulation given previously, assumed on)" on CBI 1 CBI[c] <==> 1 CBI[e] on Transporters on Added by EWB because they were previous included as exchange fluxes on THY 1 THY[c] <==> 1 THY[e] on Transporters on Added by EWB because they were previous included as exchange fluxes on H2O2 1 H2O2[c] <==> 1 H2O2[e] on Transporters on Added by EWB because they were previous included as exchange fluxes on BT 1 BT[c] <==> 1 BT[e] on Transporters on Added by EWB because they were previous included as exchange fluxes on T5KG 1 5KG[c] <==> 1 5KG[e] on Transporters on Added by EWB because they were previous included as exchange fluxes on PPNT 1 PPNT[c] <==> 1 PPNT[e] on Transporters on Added by EWB because they were previous included as exchange fluxes on