O 15.99940 ; CARBONYL OXYGEN (C=O) OM 15.99940 ; CARBOXYL OXYGEN (CO-) OA 15.99940 ; HYDROXYL OXYGEN (OH) OW 15.99940 ; WATER OXYGEN N 14.00670 ; PEPTIDE NITROGEN (N OR NH) NT 14.00670 ; TERMINAL NITROGEN (NH2) NL 14.00670 ; TERMINAL NITROGEN (NH3) NR5 14.00670 ; AROMATIC N (5-RING,2 BONDS) NR5* 14.00670 ; AROMATIC N (5-RING,3 BONDS) NP 14.00670 ; PORPHYRIN NITROGEN C 12.01100 ; BARE CARBON (PEPTIDE,C=O,C-N) CH1 13.01900 ; ALIPHATIC CH-GROUP CH2 14.02700 ; ALIPHATIC CH2-GROUP CH3 15.03500 ; ALIPHATIC CH3-GROUP CR51 13.01900 ; AROMATIC CH-GROUP (5-RING), united CR61 13.01900 ; AROMATIC CH-GROUP (6-RING), united CB 12.01100 ; BARE CARBON (5-,6-RING) H 1.00800 ; HYDROGEN BONDED TO NITROGEN HO 1.00800 ; HYDROXYL HYDROGEN HW 1.00800 ; WATER HYDROGEN HS 1.00800 ; HYDROGEN BONDED TO SULFUR S 32.06000 ; SULFUR FE 55.84700 ; IRON ZN 65.37000 ; ZINC NZ 14.00670 ; ARG NH (NH2) NE 14.00670 ; ARG NE (NH) P 30.97380 ; PHOSPHOR OS 15.99940 ; SUGAR OR ESTER OXYGEN CS1 13.01900 ; SUGAR CH-GROUP NR6 14.00670 ; AROMATIC N (6-RING,2 BONDS) NR6* 14.00670 ; AROMATIC N (6-RING,3 BONDS) CS2 14.02700 ; SUGAR CH2-GROUP SI 28.08000 ; SILICON NA 22.98980 ; SODIUM (1+) K 39.10000 ; POTASSIUM (1+) (proefschrift Straatsma) CL 35.45300 ; CHLORINE (1-) CA 40.08000 ; CALCIUM (2+) MG 24.30500 ; MAGNESIUM (2+) F 18.99840 ; FLUORINE (COV. BOUND) CP2 14.02700 ; ALIPHATIC CH2-GROUP USING Ryckaert- CP3 15.03500 ; ALIPHATIC CH3-GROUP USING Ryckaert- CR5 12.01100 ; AROMATIC CH-GROUP (5-RING)+H CR6 12.01100 ; AROMATIC C- bonded to H (6-RING)+H HCR 1.00800 ; H attached to aromatic C (5 or 6 ri OWT3 15.99940 ; TIP3P WATER OXYGEN OWT4 15.99940 ; TIP4P WATER OXYGEN SD 32.06000 ; DMSO Sulphur OD 15.99940 ; DMSO Oxygen CD 15.03500 ; DMSO Carbon CHE 12.01100 ; HEME RING CARBON MNH3 0 ; Dummy mass in rigid tetraedrical NH3 group MW 0 ; Dummy mass in rigid tyrosine rings IW 0 ; Dummy particle in TIP4P etc.