Share 
Follow 
AboutDownloadsDocumentsForumsWikiIssuesNews
Date:
2019-07-26 19:35
Priority:
3
State:
Open
Submitted by:
Ryan Boyd (rjboyd00)
Assigned to:
Nobody (None)
Resolution:
none
Summary:
This tutorial CHARMM-GUI tutorial is giving me errors!

Detailed description
http://openmm.org/tutorials/b2ar_membrane/

I am a total noob but perhaps line 9 should be:

" params = CharmParameterSet('par_all36_prot.rtf', 'top_all36_prot.prm', 'par_all36_lipid.rtf', 'top_all36_lipid.prm', 'toppar_water_ion.str') "

as opposed to:

params = CharmmPsfFile('par_all36_prot.rtf', 'top_all36_prot.prm', 'par_all36_lipid.rtf', 'top_all36_lipid.prm', 'toppar_water_ion.str')

?

Add A Comment: Notepad

No Comments Have Been Posted

Attachments:
Size Name Date By Download
6 KiBOMM output errors from tutorial http:::openmm.org:2019-07-26 19:35rjboyd00OMM output errors from tutorial http:::openmm.org:
Field Old Value Date By
File Added687: OMM output errors from tutorial http:::openmm.org:2019-07-26 19:35rjboyd00
Feedback