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Protein Mechanica is a computational tool to construct, simulate and visualize models of molecular motors to explore protein kinematics and possible structure- function relationships. It provides an interactive command-driven environment executing on a personal computer that allows users to create plausible, testable models for the structural dynamics of molecular motors.
Downloads instructions and details
Protein Mechanica
Alpha release
Alpha
Dec 22, 2009

Protein Mechanica is in an alpha release stage.   

Download Links

Windows

Jan 06, 2010
1 MB
Windows
Application/binary
Zip file containing Windows executable and test scripts.

Cygwin

Apr 17, 2010
1 MB
Other
Application/binary
Zip file containing Cygwin executable and test scripts.

Tutorials

Jan 06, 2010
556 KB
Any
Data/images/video
Tutorial 1 - Basics: documentation, scripts and data.

Jan 06, 2010
997 KB
Any
Data/images/video
Tutorial 2- Structural Modeling: documentation, scripts and data.

Jan 06, 2010
1 MB
Any
Data/images/video
Tutorial 3 - Mechanical Modeling: documentation, scripts and data.

Feb 06, 2010
1 MB
Any
Data/images/video
Tutorial 4 - Modeling Interactions: documentation, scripts and data

Examples

Jan 15, 2010
16 MB
Any
Other
Many example scripts demonstrating Protein Mechanica functionality.

Documentation Links

Dec 22, 2009
User's Guide

Jan 06, 2010
Installation instructions

Jan 04, 2010
Protein Mechanica Tutorial 1 - Basics

Jan 04, 2010
Protein Mechanica Tutorial 2 - Structural Modeling

Jan 04, 2010
Protein Mechanica Tutorial 3 - Mechanical Modeling

Feb 06, 2010
Protein Mechanica Tutorial 4 - Modeling Interactions


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