Molmodel

SimTK::PdbAtom Member List

This is the complete list of members for SimTK::PdbAtom, including all inherited members.
canonicalizeAtomName(const String &casualName)SimTK::PdbAtom [protected, static]
generatePossibleAtomNames(SimTK::String name)SimTK::PdbAtom [protected, static]
getAlternateLocationIndicator() const SimTK::PdbAtom [inline]
getCoordinates() const SimTK::PdbAtom [inline]
getLocation(char altLoc) const SimTK::PdbAtom
getLocation() const SimTK::PdbAtom
getName() const SimTK::PdbAtom [inline]
getOccupancy() const SimTK::PdbAtom [inline]
getPdbAtomLocation() const SimTK::PdbAtom [inline]
getTemperatureFactor() const SimTK::PdbAtom [inline]
hasLocation(char altLoc) const SimTK::PdbAtom
hasLocation() const SimTK::PdbAtom
parsePdbLine(const String &line)SimTK::PdbAtom [protected]
PdbAtom(const SimTK::String &name, const Element &e)SimTK::PdbAtom [explicit]
PdbAtom(const class Compound &compound, const String &atomName, const Transform &transform=Transform())SimTK::PdbAtom [explicit]
PdbAtom(const State &state, const class Compound &compound, const String &atomName, const Transform &transform=Transform())SimTK::PdbAtom [explicit]
PdbResidue classSimTK::PdbAtom [friend]
setLocation(const PdbAtomLocation &loc)SimTK::PdbAtom [inline]
write(std::ostream &os, int &nextAtomSerialNumber, const char residueName[4], PdbResidueId residueId, char chainId, const Transform &transform) const SimTK::PdbAtom
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