, including all inherited members.
addAtom(AtomSubsystem::AtomIndex atomIndex, length_t rMin, energy_t wellDepth) | SimTK::VanDerWaalsForce | [inline] |
addBoundarySphere(const location_t ¢er, length_t radius, length_t vdwRadius, energy_t wellDepth) | SimTK::VanDerWaalsForce | [inline] |
area_t typedef | SimTK::VanDerWaalsForce | |
AtomIndex typedef | SimTK::VanDerWaalsForce | |
atomSubsystem | SimTK::VanDerWaalsForce | [protected] |
calcForce(const State &state, Vector_< SpatialVec > &bodyForces, Vector_< Vec3 > &particleForces, Vector &mobilityForces) const | SimTK::VanDerWaalsForce | [inline, virtual] |
calcForce(const VdwAtom &vdwAtom1, const VdwAtom &vdwAtom2, const State &state, Vector_< SpatialVec > &bodyForces) const | SimTK::VanDerWaalsForce | [inline, protected] |
calcForce(const WallSphere &sphere, const VdwAtom &vdwAtom2, const State &state, Vector_< SpatialVec > &bodyForces) const | SimTK::VanDerWaalsForce | [inline, protected] |
calcForceAndEnergy(const location_t &r, Real dij, Real eij) const | SimTK::VanDerWaalsForce | [inline, protected] |
calcPotentialEnergy(const State &state) const | SimTK::VanDerWaalsForce | [inline, virtual] |
calcPotentialEnergy(const VdwAtom &vdwAtom1, const VdwAtom &vdwAtom2, const State &state) const | SimTK::VanDerWaalsForce | [inline, protected] |
calcPotentialEnergy(const WallSphere &sphere, const VdwAtom &vdwAtom2, const State &state) const | SimTK::VanDerWaalsForce | [inline, protected] |
cutoff | SimTK::VanDerWaalsForce | [protected] |
cutoffSquared | SimTK::VanDerWaalsForce | [protected] |
decorateAtoms(DecorationSubsystem &decorations, Real scale=1.0) const | SimTK::VanDerWaalsForce | [inline] |
decorateBoundingSpheres(DecorationSubsystem &decorations) const | SimTK::VanDerWaalsForce | [inline] |
dependsOnlyOnPositions() const | SimTK::VanDerWaalsForce | [inline, virtual] |
energy_t typedef | SimTK::VanDerWaalsForce | |
force_t typedef | SimTK::VanDerWaalsForce | |
inverse_area_t typedef | SimTK::VanDerWaalsForce | |
length_t typedef | SimTK::VanDerWaalsForce | |
location_t typedef | SimTK::VanDerWaalsForce | |
realizeAcceleration(const State &state) const | SimTK::Force::Custom::Implementation | [virtual] |
realizeDynamics(const State &state) const | SimTK::Force::Custom::Implementation | [virtual] |
realizeInstance(const State &state) const | SimTK::Force::Custom::Implementation | [virtual] |
realizeModel(State &state) const | SimTK::Force::Custom::Implementation | [virtual] |
realizePosition(const State &state) const | SimTK::Force::Custom::Implementation | [virtual] |
realizeReport(const State &state) const | SimTK::Force::Custom::Implementation | [virtual] |
realizeTime(const State &state) const | SimTK::Force::Custom::Implementation | [virtual] |
realizeTopology(State &state) const | SimTK::Force::Custom::Implementation | [virtual] |
realizeVelocity(const State &state) const | SimTK::Force::Custom::Implementation | [virtual] |
VanDerWaalsForce(const AtomSubsystem &atomSubsystem, length_t cutoff=0.0 *nanometers) | SimTK::VanDerWaalsForce | [inline] |
vdwAtoms | SimTK::VanDerWaalsForce | [protected] |
wallSpheres | SimTK::VanDerWaalsForce | [protected] |
~Implementation() | SimTK::Force::Custom::Implementation | [virtual] |